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2024-05-17 06:22:43

Gene list

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COG category: Replication, recombination and repair
Organism: Rickettsia conorii str. Malish 7, Malish 7

Number of genes found: 87

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Rickettsia conorii str. Malish 7, Malish 7
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA RC0851 unknownSubName: Full=Uncharacterized protein; chromosome CDS801595 960 - 0.31875
NA RC1139 unknownSubName: Full=Uncharacterized protein; chromosome CDS1052789 375 - 0.306667
NA RC1188 unknownSubName: Full=Uncharacterized protein; chromosome CDS1088998 1098 + 0.261384
NA RC1114 ATP-dependent helicaseSubName: Full=ATP-dependent helicase; EC=2.3.1.129; chromosome CDS1034296 2469 + 0.319158
NA RC0455 unknownRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS450062 465 + 0.309677
NA RC0351 unknownSubName: Full=Uncharacterized protein; chromosome CDS353678 348 + 0.270115
NA RC0797 unknownSubName: Full=Uncharacterized protein; chromosome CDS750417 1542 - 0.289235
NA RC1324 unknownSubName: Full=Uncharacterized protein; chromosome CDS1224894 951 - 0.263933
NA RC1159 unknownSubName: Full=Uncharacterized protein; chromosome CDS1063727 1119 + 0.318141
NA RC1125 unknownSubName: Full=Uncharacterized protein; chromosome CDS1044723 192 - 0.291667
NA RC0979 unknownSubName: Full=Uncharacterized protein; chromosome CDS917716 669 + 0.2571
NA RC0091 unknownRecName: Full=Uncharacterized protein RC0091; chromosome CDS84596 540 + 0.305556
NA RC1309 N-terminus of bacteriophage-type DNA polymerase [EC:2.7.7.7]SubName: Full=N-terminus of bacteriophage-type DNA polymerase; EC=2.3.1.129; chromosome CDS1213379 840 - 0.345238
NA RC0809 unknownSubName: Full=Uncharacterized protein; chromosome CDS764147 738 + 0.352304
NA RC0690 similarity to DNA adenine methyltransferases (MboA)SubName: Full=DNA adenine methyltransferases (MboA)-like protein; EC=2.3.1.129; chromosome CDS666020 549 + 0.296903
NA RC1277 similarity to DNA repair protein (RadC)SubName: Full=DNA repair protein (RadC)-like protein; EC=2.3.1.129; chromosome CDS1186397 312 + 0.307692
NA RC0493 unknownSubName: Full=Uncharacterized protein; chromosome CDS486509 1182 + 0.273266
NA RC1172 unknownSubName: Full=Uncharacterized protein; chromosome CDS1072363 348 - 0.313218
NA RC0238 unknownSubName: Full=Uncharacterized protein; chromosome CDS248347 975 + 0.275897
NA RC0868 similarity to methylated-DNA--protein-cysteine methyltransferaseSubName: Full=Methylated-DNA--protein-cysteine methyltransferase-like protein; EC=2.3.1.129; chromosome CDS817241 582 - 0.386598
NA RC1278 similarity to DNA repair protein (RadC)SubName: Full=DNA repair protein (RadC)-like protein; EC=2.3.1.129; chromosome CDS1186713 369 + 0.298103
NA RC0627 unknownSubName: Full=Uncharacterized protein; chromosome CDS610349 1353 + 0.2949
NA RC0470 similarity to spore photoproduct lyaseSubName: Full=Spore photoproduct lyase-like protein; EC=2.3.1.129; chromosome CDS466453 564 - 0.303191
NA RC0812 unknownRecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS766797 714 + 0.263305
NA RC0867 similarity to methylated-DNA--protein-cysteine methyltransferaseSubName: Full=Methylated-DNA--protein-cysteine methyltransferase-like protein; EC=2.3.1.129; chromosome CDS816906 177 - 0.344633
NA RC1126 unknownSubName: Full=Uncharacterized protein; chromosome CDS1044915 402 - 0.345771
NA RC0039 unknownRecName: Full=Uncharacterized protein RC0039; chromosome CDS36524 669 - 0.304933
NA RC0550 unknownRecName: Full=Uncharacterized protein RC0550; chromosome CDS540798 2517 - 0.286849
NA RC1346 unknownSubName: Full=Uncharacterized protein; chromosome CDS1248762 465 - 0.309677
NA RC1124 unknownSubName: Full=Uncharacterized protein; chromosome CDS1044311 366 - 0.314208
NA RC0450 similarity to DNA processing protein SmfSubName: Full=DNA processing protein Smf-like protein; EC=2.3.1.129; chromosome CDS445193 336 - 0.348214
NA RC1325 unknownSubName: Full=Uncharacterized protein; chromosome CDS1225854 636 - 0.237421
NA RC1268 integrase/recombinaseRecName: Full=Tyrosine recombinase XerC; chromosome CDS1169138 918 - 0.297386
NA RC0688 putative transposable insertion elementSubName: Full=Putative transposable insertion element; EC=2.3.1.129; chromosome CDS664862 528 + 0.320076
NA RC0866 unknownSubName: Full=Uncharacterized protein; chromosome CDS816340 420 - 0.283333
NA RC1045 unknownSubName: Full=Uncharacterized protein; chromosome CDS969461 921 - 0.351792
NA RC0864 excinuclease ABC subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS813554 1920 - 0.358333
dat RC0870 methylated-DNA--protein-cysteine methyltransferase [EC:2.1.1.63]SubName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.3.1.129; chromosome CDS818046 507 - 0.343195
dinJ RC1344 DNA-damage-inducible protein JSubName: Full=DNA-damage-inducible protein J; EC=2.3.1.129; chromosome CDS1247038 264 + 0.371212
dnaA RC0916 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS862914 1392 + 0.349138
dnaB RC0803 replicative DNA helicase [EC:3.6.1.-]RecName: Full=Replicative DNA helicase; EC=3.6.4.12; chromosome CDS757181 1485 + 0.329966
dnaE RC1211 DNA polymerase III alpha chain [EC:2.7.7.7]RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS1105664 3546 - 0.35251
dnaG RC1330 DNA primase [EC:2.7.7.-]RecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1233961 1788 - 0.306488
dnaN RC0583 DNA polymerase III beta chain [EC:2.7.7.7]RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS570733 1140 + 0.318421
dnaQ RC1112 DNA polymerase III epsilon chain [EC:2.7.7.7]RecName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7; chromosome CDS1032772 693 + 0.324675
dnaX RC1336 DNA polymerase III gamma and tau chains [EC:2.7.7.7]SubName: Full=DNA polymerase III gamma and tau chains; EC=2.3.1.129; chromosome CDS1239738 1530 + 0.315033
gyrA RC0273 DNA gyrase subunit A [EC:5.99.1.3]RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS274436 2718 + 0.392568
gyrB1 RC0309 DNA gyrase subunit B [EC:5.99.1.3]RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS310939 1989 + 0.339367
gyrB2 RC0884 DNA gyrase subunit B [EC:5.99.1.3]RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS830456 2424 - 0.372525
himA RC1088 integration host factor alpha-subunitRecName: Full=Histone-like DNA-binding protein; chromosome CDS1015018 288 - 0.291667
himD RC0757 integration host factor beta-subunitRecName: Full=DNA-binding protein HU-like; chromosome CDS720651 243 - 0.251029
holB RC0213 DNA polymerase III delta subunit [EC:2.7.7.7]SubName: Full=DNA polymerase III delta subunit; EC=2.3.1.129; chromosome CDS222576 810 + 0.269136
hupA RC0212 DNA-binding protein HURecName: Full=DNA-binding protein HU; chromosome CDS222017 420 + 0.302381
invA RC0320 invasion protein ARecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS322147 486 - 0.358025
lig RC1096 DNA ligase [EC:6.5.1.2]RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1021136 2070 - 0.335266
mfd RC0913 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS858737 3369 - 0.317602
mpg RC0480 DNA-3-methyladenine glycosidase [EC:3.2.2.21]RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS475819 552 - 0.355072
mutL RC1361 DNA mismatch repair protein MutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS1257447 1833 - 0.338243
mutM RC1038 formamidopyrimidine-DNA glycosidase [EC:3.2.2.23]RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS963854 822 + 0.313869
mutS RC0401 DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS400156 2673 - 0.337074
nth RC1149 endonuclease III [EC:4.2.99.18]RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1059395 633 + 0.334913
parC RC0097 topoisomerase IV subunit A [EC:5.99.1.-]RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS90242 2217 + 0.35724
polA RC1206 DNA polymerase I (POL I) [EC:2.7.7.7]RecName: Full=DNA polymerase I; Short=POL I; EC=2.7.7.7; chromosome CDS1100440 2628 + 0.325342
priA RC0800 possible primosomal protein NRecName: Full=Primosomal protein N; EC=3.6.4.-; AltName: Full=ATP-dependent helicase PriA; chromosome CDS754229 1947 - 0.332306
recA RC1182 RecA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1083335 1089 + 0.37741
recF RC0032 RecF proteinRecName: Full=DNA replication and repair protein RecF; chromosome CDS32500 1083 - 0.313019
recG RC0901 ATP-dependent DNA helicase RecG [EC:3.6.1.-]SubName: Full=ATP-dependent DNA helicase RecG; EC=2.3.1.129; chromosome CDS847167 2142 - 0.344538
recJ RC0761 single-stranded-DNA-specific exonuclease RecJ [EC:3.1.-.-]SubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=2.3.1.129; chromosome CDS725054 1764 - 0.331633
recN RC0229 DNA repair protein RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS238565 1638 - 0.32906
recR RC0609 recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS594180 606 + 0.344884
rhlE RC1020 ATP-dependent RNA helicase RhlESubName: Full=ATP-dependent RNA helicase RhlE; EC=2.3.1.129; chromosome CDS945111 1245 - 0.351004
rnhA RC1108 ribonuclease H [EC:3.1.26.4]RecName: Full=Ribonuclease HI; Short=RNase HI; EC=3.1.26.4; chromosome CDS1029683 468 - 0.344017
rnhB RC0264 ribonuclease HII [EC:3.1.26.4]RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS268353 582 + 0.340206
ruvA RC0531 holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS521234 612 + 0.336601
ruvB RC0533 holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS522799 1065 + 0.371831
ruvC RC0159 crossover junction endodeoxyribonuclease RuvC [EC:3.1.22.4]RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS159014 474 + 0.367089
sca4 RC0667 cell surface antigenRecName: Full=Antigenic heat-stable 120 kDa protein; AltName: Full=120 kDa antigen; AltName: Full=Protein PS 120; Short=PS120; AltName: Full=RCA; chromosome CDS648230 3081 + 0.351185
ssb RC1295 single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS1200462 459 + 0.337691
topA RC0449 DNA topoisomerase I [EC:5.99.1.2]RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; AltName: Full=Omega-protein; AltName: Full=Relaxing enzyme; AltName: Full=Swivelase; AltName: Full=Untwisting enzyme; chromosome CDS442731 2331 - 0.349635
uvrA RC1294 excinuclease ABC subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS1197492 2868 - 0.360879
uvrB RC0266 excinuclease ABC subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS269088 1986 - 0.378651
uvrD RC0624 DNA helicase II [EC:3.6.1.-]RecName: Full=Probable DNA helicase II homolog; EC=3.6.4.12; chromosome CDS607454 1962 + 0.334862
xerD RC0491 integrase/recombinaseRecName: Full=Tyrosine recombinase XerD; chromosome CDS484377 921 + 0.333333
xseA RC1026 exodeoxyribonuclease large subunit [EC:3.1.11.6]RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS952908 1374 + 0.328239
xseB RC0475 exodeoxyribonuclease small subunit [EC:3.1.11.6]RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS474190 243 + 0.308642
xthA1 RC0346 exodeoxyribonuclease III [EC:3.1.11.2]SubName: Full=Exodeoxyribonuclease III; EC=2.3.1.129; chromosome CDS348340 861 + 0.332172
xthA2 RC1028 exodeoxyribonuclease III [EC:3.1.11.2]SubName: Full=Exodeoxyribonuclease III; EC=2.3.1.129; chromosome CDS954956 783 + 0.305236