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# Salmonella typhimurium LT2, LT2; SGSC 1412; ATCC 700720

>gid:63236  STM0037  putative cytoplasmic protein
MNMFSHINVDACKTPGCKNLGILGSPDYLPQGKNVLCRACGFLFPIISAR
SLNLFRQAANQPWKGLVKSCPHCGGTSLKKYGFSTKGERRMYCRQCNKTF
ISYTAIRSDARQENLATLIGEGASLVEIRAALAIDSTGFSRELQKLSRRA
NQAERDFVFPAFDIAMSTRAFRVKFNGGDSSLYVLVTAEEESGKVVAIST
NYSAQPVEADYQYHSDYEERLPSGTLAHLVQRKEALTMRRNVLFDVDYGP
AVLYKNDPGMLVKPVLPAYRHFELVQALTDERSLNVQHYLDHECFILGGC
MMANFSYLRQGRCHISFVRERGVTPPKRDLPPRLFLSGGIRNNVWRTFST
RDYAMAVCNLTGNKKVSLLRHATLNSATAFIRYVHNHPFLPHLNRMSPGN
VVAVLDYLKFEYNASRN
>gid:63768  STM0297  putative transposase
MRKARITAHQIIAVIRSVESGRTVKDVYREAGISEATRDNWRSGYGGRDT
RGITKGSTVFTVCSS
>gid:63770  STM0298  putative integrase core domain
MLRMDKGPEFISLALAEWAKKHAVKLAFIQPGKPKKNVFITRFNRTYRTE
ILNSYLFRTLNEVWEITDKGLSEYNCERPHESRNNMIPKEYRQ
>gid:63825  STM0325  putative IS3 transposase
MLASTPPTSTGVFNRALSSLAIACICKRYVWHQRRHQINRRQRFHLVCDN
VFREAFSDAKQRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASRR
FRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAVV
IDLWSRSVIGWSMSSRMTAQLACDALQMALWRRKCPENVIVHTDRGGQYC
STDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLKVECIHGEDFVSRE
IMRTAVFNYSECDYNR
>gid:64285  STM0556  putative transposase
MSGKRYPEEFKIEAVRQVVERGHSVSSAATHLDITTHSLYARIKKYGSNS
STNKEIKSSQMIRPESADSRKS
>gid:64613  STM0716  putative phage integrase
MKRKYLTQEEIEKLLSATDRMPFPERNRCLILMAFIHGFRASELLGLRLS
DIDLAGRQLYIRRLKNGFSTCHPLLPDEYNVLKSWLRARKYLEKGADGDW
LFLSLRRHPLSRQQFFYILREAGRLAELTIAPHPHMLRHACGYALADKGI
DTRLIQDYLGHRNIQHTVRYTASNAGRFHGIWRKKRRV
>gid:64984  STM0893  putative Fels-1 prophage integrase
MTLLDAGGIMAKPAYPTGVEKHGDKLRICFHYKGRRVRENLGVPDTPKNR
KVAGELRASVCFAIKVGTFDYAAQFPDSPNLKLFGIVNKEITVAELADKW
LKLKEMEISKNTMLRYESIIKISVSLLGGRVLASSVTQEDLLFFRKELMT
GHHITRPGRELAPKGRSVATVNSYLGVVSGLFQFAARNGYIPQNPFNGIT
MLKRAKAEPDPLSREEFARLIDACHHQQIKNLWSLAVYTGMRHGELCALA
WEDIDLKAGTLIVRRNYTQAKEFTLPKTQAGTDRVIHLVQPAIDALKSQA
SFTKLSKQHKIEVKLREYGRTKTHSCTFVFNPQITDRSGKSKAHYAAPSL
NRIWESALRRAGLRHRKAYQSRHTYACWALAAGANPNFIASQMGHSNAQM
VYTVYGAWMADNNQSQVDILNQQLASTAPGVPQKDNMLNFI
>gid:65000  STM0900  putative Fels-1 prophage DNA or RNA helicases of superfamily II
MLRRDWKSHNTFMVYAPTGSGKTGLAAFIVDGFVSRGMRVMFCVPYQILI
TQTASRFIEYGLSGDEIGYVWASHPNHNPALKIQIASADTLIRREFPDNI
DLLIIDEAHLRKKRILQDIERLRASGVKVIGLSGTPFSPFLGKYYDRLIK
PTTIGELIQRGDLSKYEFYAPTKPDLKGVKTKSSLEYGSDYNEAQLAEIM
CGSTLVGDIVQNWLENGRDLPTIAFCVNVAHANYLTIQFNLAGINAEVMT
ADTPVDERQTIIHRFETGATKIIVSVGVLVAGFDSDVRCIIYARPTKSEI
RWLQAIGRGLRTAPGKESCLIFDHSGTVHRLGYPDSIEYDDLPGKSDGME
ESARRSSQERAEKLPRECSQCHYMKPAGVYVCPKCGHKPLAGEDVDTDTG
RKLKKLGKNQHRPTKAQKQAWWSQIKFYQRQRVSQGKRPVSDGWCAHTFR
EKFGEWPNDLSDFPMEITPEVSNYIRHKLIRYAKGKGKAAAPAETASPIP
DSDITHKVISAKRQVENIRSMLGRRTA
>gid:65092  STM0947  putative integrase protein
MQADKTLNIGRDRLFNLLGEYRLLVPVKRAYHKTTNSHHRFYRHPNLLKP
GPEQVTALEPEQVWVADITYLPLRSGTACLSLVTDACSRKIVGYHVGENL
QTENVVKAFRQALRRRKTTGPLVHHSDRGLQYCSVLYQSVHERNGITCSM
TDGYDCYQNALAERINGILKNEFLLSRPADLEQAREIVKESVAIYNHERP
HLALKYKTPDDVHQAFYRQKTVNLYQD
>gid:65093  STM0948  putative cytoplasmic protein
MMTEFKRTQRDYPLSFKIAVVEQVEKGEMTYKQAQQRYGIQGRSTVLVWL
RKYGRLDWRPGLPDLVKRKLPVAQTTIPLTPEQRIRELEEQLELANQKAE
FFESVINVLKNDYGVSVVKKRPGKSSRKVRPPK
>gid:65242  STM1005  Gifsy-2 prophage integrase
MANASYPTGVENHGGSLRIWFLYKGKRVRENLGIPDTAKNRKIAGELRSS
VCFAIRMGNFNYVEKFPNSPNLARFGQDRKEITVLELTERWSELKRMEIS
SNTMSRYESIIKNMLPLIGENKMVSAVTTEDLLYVRKELLTGFQVMKKDH
RTQVKGRKSSTVNNYMMLMAEIFQFGTDNGYAKENPFSGINRLKKAKGEP
DPLTTDEFIRFIQACGHQQMRNLWSLAVYTGMRHGELCGLAWEDIDLHAG
TIIVKRNLTQTDEFTLPKTDAGTDRVIYLIQPAIDALRNQAQLTRLGRQF
EVEVKLREYGQSVIQPCTFVFSPQCVKRGPRTGYHYAVNSINKIWAPIIK
RAGIRYRNAYQSRHTYACWSLSAGANPNFIATQMGHTDAQMVYKVYGKWM
SEKSAEQVSLLNQALFRYAPSLPQSMVAAQ
>gid:65261  STM1015  Gifsy-2 prophage ATPase involved in DNA replication initiation
MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRM
NQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGS
GFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYD
GGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPV
GVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
>gid:65834  STM1301  putative mutator MutT protein
MIKKLDVVAAIIECDGKILLAQRPAHADQAGLWEFAGGKVEPGETQPQAL
IRELREELGIDATPGVYIASHQRDVSGRRIHLHAWHVPAFNGLIRALEHQ
ALAWCTPEEALEYPLAPADIPLLQAFIALRDARLTDSC
>gid:65849  STM1309  putative nuclease subunit of the excinuclease complex
MNNQLTEITVVRRQSAPRLEFEAAAIYEYPEHLRPFLSEAPALPGVYIFH
SESDTLPLYIGKSVNIRSRVLSHLRTPDEATMLRQARRISWICTAGEMGA
LLLEARLIKEQQPLFNKRLRRNRQLCSLQLSEQKIEVVSARSVDFSHEPN
LFGLFANRRAALQSLQNLADEQKLCYGLLGLEPVSRGRACFRFALKRCAG
ACCGQETPQAHFLRLQASLERLRVVCWPWKGAIALKESRPQMTQFHIINN
WLWLGAVPSLDEAATLVRTPAGFDQDGYKILCKPLMSGQYEIIELHTDCR
QS
>gid:66950  STM1860  putative transposase
MDEKKLKALAVELAKGLKTEADLNSFSRMLAKLTVETVLNAELADHPGYE
KNAPKTGSNTRNGYSSKTVLCDDGEIELNTPRDRENTFEPQLLKKHQTRI
TQMDSQILSLYAKGMTTREIVATFKEMYDANVSPSLISKVTDAVKEQVTE
RQNRQPDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGM
WLAENEGEKFWLSVLTELKTRGVQDILIACVDGLKGFPDAINSVFPQPHI
QLCIIHMVRNSLKYVAWKGYKVATSGLRLRPKRRH
>gid:66972  STM1871  putative phage integrase protein
MALIEKLKGTDSFTVSAWIDRYEVLLQRRNLSVNTYKIRSNQLATVREKM
GEIILAEVTTRHIAKFLESWITEGKNTMAGAMRSVLSDMFREAIVEGHIV
KNPVEATRIPEIKVARERLQLETYNATRAAAEHMPAWFPLAMDLALVTGQ
RREDIVNMKFSDVFDNRLYVTQIKTGMKIAIPLSLTLRATGLRLGTVIDR
CRLVSRTDFMISAGIRKNSPTGNIHPDGLTKTFVKARKASGVNFSNNPPT
FHEIRSLAGRLYKNEHGEVFAQKLLGHTSENTTKLYLDERDNKAYVML
>gid:66975  STM1873  putative periplasmic or exported protein
MKKILLPALLLATSGVALAAPQVITVSRFEVGKDKWAFNREEVMLTCRPG
QALYVINPSTLVQYPLNAIAEQQVAEGKTRAQPIAVIQIDNPAKPGEKMS
LAPFIERAQKLCDPSNS
>gid:67966  STM2346  putative NTP pyrophosphohydrolase
MVEQRRLASTEWVDIVNEDNEVIAQSSREQMRAQRLRHRATYIVVHDGMG
KILVQRRTETKDFLPGMLDATAGGVVQADEQLLESARREAEEELGIAGVP
FAEHGLFYFEDQHCRVWGALFSCVSHGPFALQEDEVSEVCWLTPEEITAR
CDEFTPDSLKALALWMTRNAKNEAALQEKPEETE
>gid:68310  STM2509  putative IS3-like transposase
MYLAVVVDLFSCKVIGWSMQPRMTKDIVLNALLMAVWRRHPQKQVLVQSD
QGSQYTRYEWLKLHGLEGSMSRCGNCHDNAVAESFFQLLKRERIKKKIYQ
RLRSVQVIRGDSAQIRGI
>gid:68497  STM2599  Gifsy-1 prophage protein
MFAHQNASFPPRPEGRGGKEAVFRLTVFCIITFSSLICEAMKRAYKYRFY
PTTEQAELLAQTFGCVRFVYNSILRWRTDAYYERKEKIGYLQANARLTAL
KKEPEFAWLNDVSCVPLQQSLRHQQTAFANFFAGRAAYPAFKSKRHKQAA
EFTASAFKYRDGKLYMAKNKIPLDVRWSRPLPSVPSTVTISKDAAGRYFV
SCLCEFEPASLPITSSMVGIDVGLKDLFVTDTGFRSGNPRHTAKYAARLA
LLQRRLSKKAKGSKNRAKAHLKVARLHAKIADCRLDALHKATRKLINDNQ
VVCVESLKVRNMIRNPSLSKAIADASWGELVRQLRYKGEWAGRSVVAIDQ
FFPSSKRCSCCGFIMKKMPLDVRKWQCPECGTDHDRDVNAARNIKAAGLA
VLAHGEPVNPESLKAA
>gid:68517  STM2609  Gifsy-1 prophage protein
MNVNKKKLAEIFGCDVRTVTAWQSQGLPLVSGGGKGNEAVFDTAAAISWY
AERDASIENEKLRKEVDDLRAAAESDLNPGTIDYERYRLTKAQADAQELK
NAEREGLVLETELFTYILQRVAQEIAGILSRVPLVLQRKYPDLCQSHIDV
VRTEIARASGRAPR
>gid:68547  STM2625  Gifsy-1 prophage protein
MKNVIGTGSALDRLKRIIPASVQPKFSTADEWRAWQEAEGRKRSEELDRM
NQKSRTEKIFGRSGIQDLHRSCTFANYEVSGEGQRKAYTMAKSYAQNFGS
GFASFVFSGGPGTGKNHLAAAIGNHLLAGGHSVLVVTIPDLMLRVRECYD
GGQSEASLLDDLCKVDLLVLDEVGIQRGSSGEKVILNQVIDRRLSSMRPV
GVLTNLNHEGLLDSLGARVIDRLQMDGGMWVNFDWESYRKNVSHLRIVK
>gid:68567  STM2636  Gifsy-1 prophage protein
MAISDSYLKSCLGRERDKVEEKADRDGLWVRISKKGAVTFFYRFRFLGKQ
DKMTIGSYPEFGLKAAREEVTKWAAILARGENPRIRQSLDKAKINSQYTF
EELFREWHAMVCVQKETSDQILRSFELHVFPKLGKYPAHQLTLHNWLTVL
DRLAQGYTEITRRVISNGRQCYSWAVKRQLLEVNPLSEMSGRDFGIQKKM
GERTLDRKEIAIVWRAIEDSRLIERNKILYKLSLIWACRVGELRQAEVSH
FDFEEGVWTVPWENHKTGRKSKKPIIRPIIPEMLPLIQRAIELAPGRFVF
SKYADKPMSEGFHMSISSNLVKFMLKAYNEQVPHFTIHDLRRTARTNFSE
LTEPHIAEMMLGHKLPGVWSVYDKYTYIEEMREAYSKWWARLMSIIEPDV
LEFTPRQTG
>gid:68681  STM2697  Fels-2 prophage protein
MSDNNLRLQVILNAVDKLTRPFRSAQASSKELATAIQQSRARLKELDAQA
GRIDGFRKASAQLAVTGNSLKAAREEAAKLATQFSATNRPTAAQARLLEQ
AKNRVTELQSKYNGLRQSVQRQRLALNEAGLDTKKLSSAQRELRQNADET
RQALDRQQKSLKRLGEQQARMNAVRDQYSRRLEVRDRIAGAGATTTAAGV
AMGAPVVAAVKSYASMEDAMKGVAKQVNGLRDDNGNRTKQFYDMQDAIKA
ASEQLPMENGAIDYAALVEGGARMGVTNQDDPYEEQKRDLLAFASTAAKA
ATAFELPADELAEGLGKIAQLYKVPTRNIEQLGDALNYLDDNAMSKGGDI
INVLQRMGGVADRLDFRKAAALGSTFLSLGAAPEIAASASNAMVRELSIA
TMQSKRFFEGMNLLQLNPAEIEKQMTTDAMGTIQRVLEKVNNLPQDKRLS
AMTMIFGKEFGDDAAKLANNLPELQRQLKLTSGSGANGSMQKESDINKDS
LSAQWLLVKTGAQNAFSSLGETLRQPLMDIMGMVKRVTGALRRWVEQNPV
LAGTLMKVAAATAAITVGLGALAVAVAAVLGPLAVIRFGLSMLSVKALPS
AAAAATRTGSVLRLLISGPLALLRVALFAVGSLLGALLSPVGLVVAALAG
VALVIWKYWQPISAFLGGVVEGFKAAAAPISAAFEPLRPVFQWIGDRVQA
LWGWFNDLLTPVKSTSEELNSAAAMGRRFGEALAEGLNMVMHPLESLKSG
VSWLLEKLGIVSKEAAKAKLPAQVTQQQSATVNSDGKVVLPPGGFPAYAG
MYDTGGIIPRGQFGIVGENGPEIVNGPANVTSRRRTAALASVVAGVMGVA
ATPAEVAPLHPFSLPARTYQTQPVKADSPPSVIRYEINAPIHIVAQPGQS
AQDIAREVARQLDERERRARAKARSNFSDQGGYES
>gid:68692  STM2702  Fels-2 prophage protein
MQIGYVRVSTNDQNTDLQRNALNCAGCELIFEDKISGTKSERPGLKKLLR
TLSEGDTLVVWKLDRLGRSMRHLVVLVEELRERGINFRSLTDSIDTSTSM
GRFFFHIMGALAEMERELIVERTRAGLAAARAQGRVGGRRPKLTPEQWEQ
AGRLLAAGETRHRVGLLFDVSISTLYKKFPVNQSR
>gid:68744  STM2730  Fels-2 prophage protein
MSTILKWAGNKTAIMAELKKHLPEGPRLVEPFAGSCAVMIETDYPHYLVA
DINPDLINLYQVIKNDVEYFIKEGRYLFEARNDPEAYYKTRQEFNLRHGG
AIERALYFLYLNRHGYRGLCRYNLDGYFNVPYGNYKKPYFPENEIRAFAE
KAKRATFICASYDETLALLQTGDVVYCDPPYDGTFNGYHTAGFTENDQFH
LASILERRSSEGHPVIVSNSDTSLTRSLYRDFTRHRITAKRSMGVAAGDS
KTAVEIIATKSACWFGVDLASGPDISVETEVRAWQ
>gid:68763  STM2739  Fels-2 prophage protein
MSIRKQPNGKWLCECYPNGRDGKRVRKQFATKGEAIAFENHTMDEVNKKP
WLGEKEDRRHLSEVIDQWHSLYGQTLADPKRLMAKLSIICNGLGDPIASE
LTAGDFTKYREARLKGEVKNEDGVLMSPVKPRTVNLEQRNLSSVFGTLKK
LGHWSAPNPLAGLPTFKIAEGELAFLAPEEIKRLLDACADSQSPSLLMIA
KVCLATGARWSEAENLQGHQLSKYRITYTKTKGKKNRTVPISQDLYDELP
KNRGKLFTPCRKAFERAVKRAGIELPEGQCTHVLRHTFASHFMMNGGNIL
VLRDILGHADIKMTMVYAHFAPDHLEDAVTKNPLHNLNWKR
>gid:68765  STM2740  Fels-2 prophage protein
MPNQLKPLTNVEIAGAKPRSTDYELRDGEGLYLLVKTSGRKAWHFEYYHP
VTKKRTKTSLGPYPVVTLAMARETRTKYRRLLYQGIDPRQHLAGIAEEKR
IQNECTLEKVAEQWLKEKKRTSDLSEDHAKDVWRSLEMHVFPSLGNTPVT
EIRPKMLKEHLTPLEEQGILETLRRVISRLNEIFRFAISEELIEFNPADN
LVARFKKPKKQNMPALHPSELGRLMLALQNASIRKETRCLIEWELLTWVR
PGEAVSARWCDIDMKKAEWRIPDTFMKMNRSHTVPLSKQALRVLQIMEPV
SRHRPWVFPSIRKPLEHMHQQTANAALIRMGFGGELVAHGMRSRQDRRRR
SFSP
>gid:68772  STM2745  putative inner membrane protein
MKRAPFLCKQSPDRTLEVVILAGSLAWETSRVWRKDPDREDDVPPMVLGP
NELADLSNLTIIRPDTLYVRVLRTGDISEEDLLKIAVKLAHAGVQMARLM
SPDGELLENWTGQLERLRQERPSDILPDHFRLDEEALWFDKLTERRDGES
DVQPQRICSPLRVTAITCDSHDGSYGRLLEWHTTTGQLRRWAMPMAMLSG
NGEELRRILLENGLTNISTRPALRSLLCEYISRSLPGRRVTCVEKTGWHN
GVYVLPDEVIGPDGDNVILQGSHYLTGGFAQAGTLAEWQEQVAALCAGNS
RLVFAVCCALAAPLLRLTGTGGGGFHLRGESTDGKTTVMKVAASVCGGTD
YWHSWRATGNALEGIASRHNDALLPLDELREVDPREAGMIAYMLANGQGK
GRARTDGEVRNRRHWTLLLFSTGELSLAEHTERAGERIYAGMDVRMVQIP
SDTGQHGAFEQLHGFASGQQFADTLCDRVARFHGTAFRAWLAFLTHDQDA
STTLARELLRRYQNALMPDNAGNQVQRIVARFALLAAAGEIATLHGITGW
QKGTAYEAVQICLHAWLNERGHIANQEDEGVLAQIKRFITAHQYSRFASW
DGPDRPLNMAGFRRVEKDPLTGEEHTLFFILPEGWREICRGFSPARAARL
CQEAECLQPGSDGKYQSQVRLPEIGKTRVYRLTSRILSI
>gid:68801  STM2760  putative integrase
MSRLAQDMKKLAHRAGGSHKTVHDREQMAQRFARHLLAQNIQVTSTCQLK
ARHIAGYIHEWLAQGISLRTLQNEMAMVRSILAEAGRTQLSQSELISNQS
LGISGASCDGTHRAIPDALYHQVLDRVHHIDAGLAASLQLARVMGLRGQE
AVQCCQSLKTWDKQLEKGAERLPVIFGTKGGRPRMTQVTDREAVRQAVKE
ALGIAGERNGHLIDKPDLKSAMDYWHNHLRDTGLTGEYSPHSLRYAWAQD
AIRYYEEQGLSHKEALAVTSTDLGHGDGRGIYIEQVYGYTD
>gid:68805  STM2763  putative integrase
MAKIAKKLTDTEIKSTKPADKEINLFDGDGLILRIAPLAKGGKKNWYFRY
AVPVTKKRTKVSLGTYPHLTLAKARALRDEYLSLLANGIDPLVHNTQKAN
ALKDATEHTFQAVAKKWLDEKVKTSGISRDHANDIWRSLERNIFPGLGNV
PINEIRPKLLKQHLDPIEQRGVLETLRRLISRLNEIFRWAATEELTRR
>gid:68806  STM2764  putative integrase core domain protein
MQAAAERYPRYGFPKLFQVLRRQGYMWNHKRIHRIYCLLKLDFRRKGKQR
LPVRNPSPLATPEALNQSWSVDFMHDALVCGRRFRTFNVVDDFNREALSI
EIDLNLPALRVVRVLDRIAANRGYPVMLRMDNGPEFISLALAEWAEQHAV
KLEFI
>gid:68807  STM2765  putative transposase
MRKARFTEHQIIAVIKSVEAGRTVKDACREAGISEATYYNWKSRYGGMEP
SDIKKIKDLEDENRRLKQMFADLSLENRALKDVIEKKL
>gid:68814  STM2768  putative transposase
MTKPALTTKKPRKQHTPEFRQEALKLAKRIGVAAAARELSLYKSQLHNWR
SKQQNQLSSSEREQEMSAEIARLKRQLAERDEELAILQKAATYFAKRLK
>gid:68816  STM2769  putative transposase
MKYVFIEKHQAEFNIKAMCRVFQVARSGWYVWHQRRHQINRRQRFRLVCD
NVVREAFSDAKQRYGAPRLTDELRAQGYQFNVKTVAASLRRQGLRAKASR
RFRPVSYRKHGLPVSENLLKQDFYASGPNQKWVGDITYLRTGEGWLYLAV
VIDLWPRSVIGWSMSSRMTAQLACNALQMALWQRKCPENVIVHTDRGGQY
CSTDYQSLLKRHNLRGSMSARGCCYDNACAESFFHTLRVECIHGEDFVSR
EIMRTAVFNYSECDYNRWRRHSACGGLSPEQFENQNLA
>gid:69150  STM2938  putative cytoplasmic protein
MTFVPLNPIPLKDRTSMIFLQYGQIDVLDGAFVLIDKTGIRTHIPVGSVA
CIMLEPGTRVSHAAVRLASTVGTLLVWVGEAGVRVYSSGQPGGARADKLL
YQAKLALDDDLRLKVVRKMYELRFREPPPARRSVEQLRGIEGSRVRATYA
LLAKQYGVKWHGRNYDPKDWEKGDVVNRCISAATSCLYGISEAAILAAGY
APAIGFIHSGKPLSFVYDIADIIKFESVVPKAFEIAARHPAEPDKEVRLA
CRDIFRSSKLTGKLIPLIEEVLAAGEIEPPQPAPDMLPPAIPEPESLGDS
GHRGHG
>gid:70355  STM3517  putative DNA-damage-inducibile protein
MAANALVRARIDETLKDQAADVLAEMGLTISDLIRITLTKVAREKALPFD
LRIPNELTSRTIENSEAGVDIHKAKDADDLFDQLGI
>gid:71053  STM3846  putative reverse transcriptase
MTAPYRYKIYKIAKRNSDKKRTIAHPSKELKFIQREITEYLTDKLPVHEC
AFAYKKGSSIKTNAQVHLHTKYLLKMDFENFFPSITPRLFFSKLRLANID
LTADDKVLLENILFFKSKRNSNLRLSIGAPSSPLISNFVMYFWDIEVQEI
CSKIGVNYTRYADDLTFSTNNKDVLFDIPDMLENVLPKYSLGRIRINHEK
TVFSSKGHNRHVTGITLTNDNKLSIGRERKRKISAMIHHFINGKLSTDEC
NKLVGLLAFAKNIEPSFYKSMVIKYGSDNIYKLQKQKDK
>gid:71829  STM4210  putative methyl-accepting chemotaxis protein
MYAVLGEIEFDVVAYWDEFESTMGVDYTSHARIEGKPGVQFIGDKLDKIT
LKFNFHSQYCQPTTELNRLREAMTAHQAMALVFGNGDYRGWFVITDLTAT
HQHTDPYGNVIAQGGSLSLQEYTGDPKSPLLPPAITTQEPNIDEMLDELP
DVNDSWFDELLSVVEEGMREAKEMMDEVADAIDDIKKTIAQAKELVKEAK
ALKEKCGDIVDSLKKTMSSIDALFQQPLDLQTLAGLPKALAAKMQELIDS
LPGIRECAGDAGTLIEHAESLFDAITSSVAEATYDSAATLVNQARGTLQT
SAPDVSQLAAADITRSL
>gid:72351  STM4449  putative copG family helix-turn-helix protein
MATLNVRLDDKLKNEAYAVLEKLNITPTEAVRLLFQYVAETGRMPVKTVT
LSDSEDALIQTVRERLSSPQKGIKVSLDDL
>gid:72369  STM4457  putative transposase
MVRSRFTEEQIADFLQQSKNGVPNKALCEEYGFSNSTLRRWQEKHAESIR
QELKQIESTAKIVFLCFIVAAILLTLMFPKPTAALAIPPYLVYCISYIRR
FRRISAKHIRRWDISSSRSGSGAENVFYKLSWTFLFFMPAYSILQLLE
>gid:72433  STM4488  putative integrase
MALTDLAIRHARLPGKAYRLFDCHGFYIQVNPSGSKLWYLKFRFGNKKNR
MALGPYPLISLALAREKQADIRRLILEGINPAEKRREDKRGGEPL
>gid:72448  STM4496  putative ATPase involved in DNA repair
MNIEQIFEKRLDRNINGVVKAEQTDDASAWIELDEYVITRELEGHLRHFF
ESYVPATGPDRIRMENKIGVWVSGFFGSGKSHFIKILSYLLSNRKVSHNG
TERHAYSFFEDKIKDALFLADINKAVHHPTEVILFNIDSRANVDDKEDAI
LKVFLKVFNERVGYCADFPHIAHLERELAKRGQYDAFKTAFATITDSSWE
KERDSYYFISDEMAEALSQATGQSVDASRQWVEQLDKNFPLDINNFCQWV
KEWLDENGKNILFMVDEVGQFIGKNTQMMLKLQTITENLGVICGGRAWVI
VTSQADINAAIGGMSSRDGQDFSKIQGRFSTRLQLSSSNTSEVIQKRLLV
KTDAAKPALAKVWQEKGDILRNQLAFDPTTTASLRPYTSEEEFIDNYPFV
PWHYQILQKVFESIRTKGAAGKQLAMGERSQLEAFQTAAQQISPQGLDSL
VPFWRFYAAIESFLEPAVSRTITQACQNGILDEFDGNLLKTLFLIRYVDV
LKSTLDNLVTLSIDKIDTDKVELRRRVEKSLNKLEREMLIARVEDKYVFL
TNEEKEIENEIRNVEVDFSAINKKLASIIFDDILKNRKYRYPANKQDFDI
SRFLNGHPLDGAMLNDLVVKILTPKDPTYDFYDNDAACRPYTSEGDGCIL
IRLPADARTWTDIDLVVQTEKFLRDNAGQRPEQASLLSEKARENSVREKM
LRVQLESLIAEADVWAIGERLPKKSSTPSSIVDEACRYVIENTFAKLKML
RPFNGDIAREIHALLTVENDAELDLGELEESNPDAMREVETWVSMNIEFN
KPVYLRDILNHFARRPYGWPEEEVKLLVARLARKGKFSFSQQNNNIERKQ
VWELFNNSRRHSELRLHKIRRHDESQIRKAAQTMAEIAQQPFSEREEPAL
VEHIRQVFNDWKQELNVFKAKAEGGNNPGKDEIESGLRLLNSILSEKEDF
ALIEKVTSQVNELLDFSEDRENLVDFYRKQFATWQKLGAALNGSFKSNRS
ALEKDAVAVKALGELENIWQMPEPYKHLNRITPLIEQVQNVNHQLVEQHR
QHALERIDARIEESRQRLQEAHATSELQNSVLLPMQKARKRAEVSQSIPE
ILAEQQETMALQTDAEKKINQWIDELRKKQEAQLRAANEAKRAAESQQTY
VVVEKPVIQPVPKKTHLVNVASEMRKATGGEVLETAEQVEKALDTLRTSL
LAAIEAGDRIRLQ
>gid:67763  ada  O6-methylguanine-DNA methyltransferase
MMKKALLIDDECWLRVQARDASADGRFVFAVRTTGVFCRPSCRSKRALRK
NVRFFANAQQALDAGFRPCKRCQPDNARAQQRRLDKIACACRLLEQETPV
TLAFLAQAVAMSPFHLHRLFKASTGMTPKGWQQAWRARRLREALAKGEPI
TAAIYRAGFPDSSSYYRHADQTLGMTAKQFRKGGDNVSVRYALTDWVYGR
CLVAESERGICAILPGDSDDALLAELHTLFPSARHEPADALFQQRVRQVV
AAINTRDVLLSLPLDIQGTAFQQQVWQALCAIPCGETVSYQQLAATIGKP
TAVRAVASACGANKLAMVIPCHRVVRRDGALSGYRWGVRRKAQLLKREAQ
KEE
>gid:67477  alkA  3-methyl-adenine DNA glycosylase II
MFTLSWQPPYDWSWMLGFLAARAVDGVETVGEGFYARSLVVGEHRGLVSV
RPHLPTHTVQVSVSAGLLPVAPACLAKVSRLFDLDCQPAQVAAVLGPLGE
DRPGLRLPGSVDTFEQGVRAILGQLVSVAMAARLTAKVARRYGEALPDAP
DYVCFPGPETLALADPLALKALGMPLRRAEALIHLAQATLAGKLALAAPP
DIEQSVKNLQTFPGIGRWTANYFALRGWQAKDIFLPDDYLIKQRFAGMTP
AQIRRYAERWKPWRSYALLHIWYTHGWQPSMDSEIAGIQ
>gid:67762  alkB  DNA repair system specific for alkylated DNA
MLDLFADEAPWQEPLAPGAVVLRRFAFRAAQSLLDDIGFVASQSPFRQMV
TPGGYTMSVAMTNCGALGWTTDRHGYCYAVRDPLTDKPWPALPLSFASVC
RQAAIAAGYASFQPDACLINRYAPGAKLSLHQDKDEPDLRAPIVSVSLGV
PAVFQFGGLRRSDPIQRILLEHGDIVVWGGESRLFYHGIQPLKAGFHPMT
GEFRYNLTFRQAAEKE
>gid:70281  dam  DNA adenine methylase
MKKNRAFLKWAGGKYPLLDDIKRHLPKGECLVEPFVGAGSVFLNTDFSRY
ILADINSDLISLYNIVKLRTDEYVQASRELFMPETNQAEVYYQLREEFNT
CQDPFRRAVLFLYLNRYGYNGLCRYNLRGEFNVPFGRYKRPYFPEAELYH
FAEKAQNAFFYCESYADSMARADKSSVVYCDPPYAPLSATANFTAYHTNS
FSLTQQAHLAEIAENLVSNRIPVLISNHDTALTREWYQLAKLHVVKVRRS
ISSNGGTRKKVDELLALYQPGVATPARK
>gid:66509  dbpA  ATP-dependent RNA helicase
MTTFSTLNVLPAAQLNNLTELGYLEMTPVQAAALPVILAGNDVRVQARTG
SGKTAAFGLGLLHRIDVTLFQTQALVLCPTRELADQVAGELRRLARFLPN
TKILTLCGGQPFGAQRDSLQHAPHIIVATPGRLLDHLQKETVSLDALHIL
VMDEADRMLDMGFSDAIDEVIRFAPATRQTLLFSATWPEAIAAISGRVQQ
QPIRIEIDTVDALPAIEQQFFETSAHEKISLLQTLLSQHQPASCVVFCNT
KKDCQAVCDALNAVGQSALALHGDLEQRDRDQTLVRFANGSARILVATDV
AARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGSSGLAISFCAPEEA
QRANILSEMLQLKLNWLNAPARQPLLPLAAEMATLCIDGGKKAKMRPGDI
LGALTGDIGLDGADIGKINVHPMHVYVAVRQAVAQKAWKQLQNGKIKGKS
CRVRLLK
>gid:67224  dcm  DNA cytosine methylase
MQENISVTHARNLIADDAGSELQAMLSQLLEIYDVKTLVAHLNGLGEQHW
SPAIFKRVMMNAAWHRLSDNELTCLKTELPTPPAHHPHYAFRFIDLFAGI
GGIRRGFEAIGGQCVFTSEWNKHAVRTYKANYFCDPLQHRFNEDIRDITL
SHREGVSDDEAAEHIRQHIPQHDVLLAGFPCQPFSLAGVSKKNALGRAHG
FACETQGTLFFDVVRIIDARRPALFVLENVKNLKSHDQGNTFRIIMQTLD
ELGYDVADAADNGPDDPKIIDGQHFLPQHRERIVLVGFRRDLNLKTDFTL
RNIARCYPPRRPTLAELLEPVVEAKYILTPVLWKYLYRYAKKHQARGNGF
GYGMVYPDNPESVARTLSARYYKDGAEILIDRGWDMAKGEVNFDDAGNQQ
HRPRRLTPRECARLMGFEAPQTYQFRIPVSDTQAYRQFGNSVVVPVFAAV
AKLLEPKIHQAVTLRQRETVDGGRSR
>gid:69863  deaD  cysteine sulfinate desulfinase
MMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALTDLGYEKPSPIQ
AECIPHLLGGRDVLGMAQTGSGKTAAFSLPLLNNLDPELKAPQILVLAPT
RELAVQVAEAMTDFSKHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTP
GRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEGHQT
ALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTVWGMRKN
EALVRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQAL
REQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRI
GRTGRAGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRR
LEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELDLETLAAALLKMAQ
GERPLILPPDAPMRPKREFRDRDDRGPRDRNDRGPRGDREERPRRERRDV
GDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIEL
PKGMPGEVLQHFTRTRILNKPMNMQLLGDAVPHAGGERRGGGRSFSGERR
EGGRNFSGERREGGRGDGRRFSGERRESRGPRRDDSTGRRRFGGDA
>gid:64841  dinG  LexA regulated (SOS) repair enzyme
MALTAALKAQIAAWYKALQDQIPDFIPRAPQRQMIADVARTLAGEEGRHL
AIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIFSKDLPLL
RKIIPDLRFTAAFGRGRYVCPRNLAALASSEPTQQDLLAFLDDELTPNNQ
EEQKRCARLKGDLDGYKWDGLRDHTDIAIDDDLWRRLSTDKASCLNRNCH
YYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPEPKHLLLVLDEG
HHLPDVARDALEMSAEITASWYRLQLDLFSKLVATCMEQFRPKTTPPLAN
PERLNAHCEEVYELIASLNAILNLYMPAAQEAEHRFAMGELPDEVMEICQ
RLAKLTETLRGLAESFLNDLSEKTGSHDIVRLHRVILQMNRALGMFEAQS
KLWRLASMAQSSGAPVSKWATREIREGQLHVWFHCVGIRVSDQLERLLWR
SVPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHVEQGKL
VIPQMRYEPTIDNEEQHIAEMAAYFREQLESKKHHGMLVLFASGRAMQRF
LEHVADVRLLLLVQGDQPRYRLVELHRKRVESGERSVLVGLQSFAEGLDL
KGELLTQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNL
IQQVGRLIRSHACRGEVVIYDKRLLTKNYGQRLLNALPVFPIEQPAVPDV
IVKPKAKPARRRRR
>gid:63799  dinP  DNA polymerase IV
MRKIIHVDMDCFFAAVEMRDNPALRDIPIAIGGSRERRGVISTANYPARQ
FGVRSAMPTAMALKLCPHLTLLPGRFDAYKEASRHVRDIFSRYTSLIEPL
SLDEAWLDVTDSPHCYGSATLIAREIRQTIFNELQLTASAGVAPVKFLAK
IASDLNKPNGQYVITPADVPDFLKTLPLAKIPGVGKVSAAKLENMGLRTC
GDIQQCDLAMLLKRFGKFGRVLWERSQGIDERDVNSERLRKSVGVERTLA
EDIHEWSDCEAIIEHLYPELERRLAIVKPDLLIARQGVKLKFNDFQQTTQ
EHVWPQLNKEDLITTARKTWDERRGERGVRLVGLHVTLLDPQLERQLVLG
L
>gid:71036  dnaA  DNA replication initiator protein
MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDW
VRDKYLNNINGLLNTFCGADAPQLRFEVGTKPVTQTLKTPVHNVVAPAQT
TTAQPQRVAPAARSGWDNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLAR
AAARQVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKPNAKVVYM
HSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFF
HTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELET
RVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTG
RAITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKIADLLSKRRSR
SVARPRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREES
HDIKEDFSNLIRTLSS
>gid:71916  dnaB  putative replicative DNA helicase
MAGNKPFNKPQTDARDRDPQVAGIKVPPHSIEAEQSVLGGLMLDNERWDD
VAERVVAEDFYTRPHRHIFTEMGRLQESGSPIDLITLAESLERQGQLDSV
GGFAYLAELSKNTPSAANISAYADIVRERAVVRDMIAVAHEIADAGYDPQ
GRNSDELLDLAESRVFQIAENRANKDEGPKSIDQILDATVARIEQLFQQP
HDGVTGVDTGYQDLNKKTAGLQRSDLIIVAARPSMGKTTFAMNLCENAAM
LQDKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISGT
MGILLEKRNMYIDDSSGLTPTEVRSRARRIFREHGGLSLIMIDYLQLMRV
PSLSDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNS
DLRESGSIEQDADLIMFIYRDEVYHENSDLKGIAEIIIGKQRNGPIGTVR
LTFNGQWSRFDNYAGPQYDDE
>gid:72536  dnaC  chromosome replication protein
MKNVGDLMQRLQKMMPAHITPAFKTGEELLAWQKEQGEIRAAALARENRA
MKMQRTFNRSGIRPLHQNCSFDNYRVECDGQMNALSKARQYVDEFDGNIA
SFVFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFSNRE
TSEEQLLNDLSNVDLLVIDEIGVQTESRYEKVIINQIVDRRSSSKRPTGM
LTNSNMEEMTKMLGERVMDRMRLGNSLWVNFTWDSYRSRVTGKEY
>gid:63647  dnaE  DNA polymerase III, alpha subunit
MSEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGL
VKFYGAGHGAGIKPIVGADFNVHNELLGDELTHLTVLAANNTGYQNLTLL
ISKAYQRGYGAAGPIIERDWLVELKEGLILLSGGRMGDVGRCLLRGNQAL
VEECVAFYEAHFPDRYFLELIRTGRQDEETYLHAAVELAEARGLPVVATN
DVRFLESDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYMRSEEEMCELF
SDIPEALENTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKAKEGL
EERLAFLFPDEEERKKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQW
SKDNGVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMP
DFDVDFCMEKRDQVIEHVADMYGRDAVSQIITFGTMAAKAVIRDVGRVLG
HPYGFVDRISKLVPPDPGMTLAKAFEAEPQLPEIYEADEEVRALIDMARK
LEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEEGKHPVTQFDKSDVEYAG
LVKFDFLGLRTLTIINWALEMINKRRAKNGEPPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDN
FIDRKHGREELSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGY
TLGGADMLRRAMGKKKPEEMAKQRSVFEEGAKKNGIDGELAMKIFDLVEK
FAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTADMDNTEKVVGL
VDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKGVGEGPIEAII
DARNQGGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQTDMFGVLAEEPEQIEQSYASCQPWPEQVVL
DGERETLGLYLTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLV
IAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALDKYQQLLEKDRILIV
SGQVSFDDFSGGLKMTAREVMDIDEAREKYARGLAISLTDRQIDDQLLNR
LRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSDRLLNDLRGLI
GSEQVELEFD
>gid:69715  dnaG  DNA primase
MAGRIPRVFINDLLARTDIVDLIDVRVKLKKQGKNYHACCPFHNEKTPSF
TVNGEKQFYHCFGCGAHGNAIDFLMNYDKLEFVETVEELAAMHNLEIPYE
AGTGLSQIERHQRQNLYQLMNGLNDFYQQSLTHPAAKPARDYLQKRGLSA
EIIQRFAIGFAPPGWDNALKRFGNNSDNKALLLDAGMLVNNEQGSTYDRF
RNRVMFPIRDKRGRVIGFGGRVLGNDTPKYLNSPETDIFHKGRQLYGLYE
AQQYSAEPQRLLVVEGYMDVVALAQYDINYAVASLGTSTTADHMHMLFRA
TNNVICCYDGDRAGRDAAWRALETAMPYMTDGRQVRFMFLPDGEDPDTLV
RKEGKAAFEARMEQAQPLSTFLFNSLLPQVDLSSPDGSTQLAALALPLIN
QVPGDAHRIQLRQTLGLKLGIFDDSQLDRLVPKQAESGVSRPAPQLKRTT
MRILIGLLVQNPDLAPLVPPLDALDQNKLPGLGLFKELVKTCLAQPGLTT
GQLLELYRGTNDAATLEKLSMWDDIADKAIAEKTFTDSLNHMFDSLLQLR
QEELIARDRTHGLSSEERRELWTLNQELARK
>gid:71035  dnaN  DNA polymerase III, beta-subunit
MKFTVEREHLLKPLQQVSGPLGGRPTLPILGNLLLQVADGTLSLTGTDLE
MEMVARVTLSQPHEPGATTVPARKFFDICRGLPEGAEIAVQLEGDRMLVR
SGRSRFSLSTLPAADFPNLDDWQSEVEFTLPQATMKRLIESTQFSMAHQD
VRYYLNGMLFETEGSELRTVATDGHRLAVCSMPLEASLPSHSVIVPRKGV
IELMRMLDGGENPLRVQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPK
NPDKHLEAGCDILKQAFARAAILSNEKFRGVRLYVSENQLKITANNPEQE
EAEEILDVSYGGTEMEIGFNVSYVLDVLNALKCETVRIMLTDSVSSVQIE
DAASQSAAYVVMPMRL
>gid:63705  dnaQ  DNA polymerase III, epsilon subunit
MSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHV
YLKPDRLVDPEAFGVHGIADEFLLDKPVFADVVDEFLDYIRGAELVIHNA
SFDIGFMDYEFGLLKRDIPKTNTFCKVTDSLALARKMFPGKRNSLDALCS
RYEIDNSKRTLHGALLDAQILAEVYLAMTGGQTSMTFAMEGETQRQQGEA
TIQRIVRQASRLRVVFASEEELAAHESRLDLVQKKGGSCLWRA
>gid:64150  dnaX  DNA polymerase III, tau and gamma subunits
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVG
KTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAASRTK
VEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPAHV
KFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEP
RALQLLSRAADGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQAL
SLVEAVVDANGERVMSLINEAAARGIEWEALLVEMLSLLHRIAMVQLSPA
ALGSDMAAIEQRMRELARTVPPGDLQLYYQTLLIGRKELPWAPDRRMGVE
MTLLRALAFHPRMPLPEPETPRQSFAPVAPTAVMTPPQLQQPSAPAPQTS
PAPLPASTSQVLAARNQLQRAQGVTKTKKSEPAAASRARPVNNSALERLA
SVSERVQARPAPSALETAPVKKEAYRWKATTPVVQTKEVVATPKALKKAL
EHEKTPELAAKLAAEAIERDPWAAQVSQLSLPKLVEQVALNAWKEQNGNA
VCLHLRSTQRHLNSSGAQQKLAQALSDLTGTTVELTIVEDDNPAVRTPLE
WRQAIYEEKLAQARESIIADNNIQTLRRFFDAELDEESIRPI
>gid:69472  endA  DNA-specific endonuclease I
MYRNFSFAAALLAAAFSGQALADGINNFSQAKAASVKVNADAPGSFYCGC
QIRWQGKKGVVDLESCGYKVRKNENRARRIEWEHVVPAWQFGHQRQCWQD
GGRKNCAKDPVYRKMESDMHNLQPAIGEVNGDRGNFMYSQWNGGEGQYGQ
CAMKVDFKAKIAEPPARARGAIARIYFYMRDQYQLKLSRQQTQLFNVWDK
QYPVTAWECERDARIAKVQGNHNPYVQRACQARKS
>gid:69220  exo  exonuclease IX, 5'-3' exonuclease
MLASPRRECYPTRRFVRENTVAAHLLIVDALNLIRRIHAVQGSPCVETCQ
HALDQLIIHSQPTHAVAVFDDDARSSGWRHQRLPDYKAGRPPMPDDLHNE
MPALRAAFEQRGVRCWASDGNEADDLAATLALKVTEAGHQATIVSTDKGY
CQLLSPGLRIRDYFQKRWLDAPFIEKEFGVLPRQLPDYWGLAGISSSKVP
GVAGIGPKSATQLLIQFQNLEGIYAHLDEVPEKWRKKLETHKEMAFLCRD
IARLQTDLHIDGNLQQLRLAR
>gid:66986  exoX  DNA exonuclease X
MLRIIDTETCGLQGGIVEIASVDVIDGNIVNPMSHLIRPDRPITPQAMAI
HRITEAMVADKPWIEDVIPLYYGSEWYVAHNASFDRRVLPELPGEWICTM
KLSRRLWPGIKYSNMALYKSRKLSVQTPPGLHHHRALYDCYITAALLIDI
MRTTGWTAEEMVNITGRPALLTTFPFGKYRGKAVSEVAKRDPGYLRWLFN
NLDNMSPELRLTLKHYLEDVQAGEQRSNGTPQ
>gid:70077  fis  site-specific DNA inversion stimulation factor
MFEQRVNSDVLTVSTVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVNDL
YELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
>gid:67790  gyrA  DNA gyrase, subunit A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLY
AMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRY
MLVDGQGNFGSIDGDSAAAMRYTEIRLAKIAHELMADLEKETVDFVDNYD
GTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHNLTEVINGCLAYIDN
EDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEA
DAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDG
MRIVIEVKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDI
ISAFVRHRREVVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRA
PTPAEAKAALISRPWDLGNVAAMLERAGDDAARPEWLEPEFGVRDGQYYL
TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLEQIAELLHILGSADRLME
VIREEMELIRDQFGDERRTEITANSADINIEDLISQEDVVVTLSHQGYVK
YQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEANERITAILPVREYEEGVNVFMAT
ASGTVKKTALTEFSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAA
GKVVRFKEDAVRAMGRTATGVRGIKLAGDDKVVSLIIPRGEGAILTVTQN
GYGKRTAADEYPTKSRATQGVISIKVTERNGSVVGAVQVDDCDQIMMITD
AGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVAEPVDDEELDA
IDGSVAEGDEDIAPEAESDDDVADDADE
>gid:71031  gyrB  DNA gyrase, subunit B
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDE
ALAGHCKDIVVTIHADNSVSVTDDGRGIPTGIHPEEGVSAAEVIMTVLHA
GGKFDDNSYKVSGGLHGVGVSVVNALSQKLELVIQRDGKIHRQIYEHGVP
QAPLAVTGDTDKTGTMVRFWPSHETFTNVTEFEYEILAKRLRELSFLNSG
VSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNIFYFSTEKDGI
GVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVE
QQMNELLSEYLLENPSDAKIVVGKIIDAARAREAARRAREMTRRKGALDL
AGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHSIIIMTDAD
VDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKGKQEQYIKDDE
AMDQYQISIALDGATLHANAHAPALSGEALEKLVSEYNATQKMIGRMERR
FPKALLKELVYQPTLTEADLSDEQTVTRWVNALITELNEKEQHGSQWKFD
VHTNTEQNLFEPIVRVRTHGVDTDYPLDHEFVTGAEYRRICTLGEKLRGL
IEEDAFIERGERRQPVTSFEQALEWLVKESRRGLAIQRYKGLGEMNPDQL
WETTMDPESRRMLRVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAA
NIDI
>gid:65387  helD  DNA helicase IV
MELKATSLGKRLAQHPYDRAEILNAGVKVSGDRHEYLIPFNQLLAIHCKR
GLVWGELEFVLPEDKVVRLHGTEWSETQQFHRYLDAHWRRWSQEMSDVAA
QALQEQWARISERTGGNQWLTRERVRGLEHEIRQTFAALPLPVSRLEEFA
HCREIWRKCLAWLQDSEGSRQQHNQAYADAMLEAHADFFTQIESSPLNPS
QARAVVNGESSLLVLAGAGSGKTSVLVARAGWLLARGQADAGQILLLAFG
RKAAEEMDERIRERLHTEEITARTFHSLALYIIQQGSKKAPVVSKLESDA
TARHQLFLRTWRQQCSEKKAQAKGWRQWLEEEMQWVVPEGNFWDDETLQR
RLAPRLDRWVSLMRMHGGAQAEMIAGAPEECRELFGKRIKLMAPLLKAWK
SALKAENAVDFSGLIHQAMVILEKGRFISPWKHILVDEFQDISPQRAALL
EALRKQNSQTTLFAVGDDWQAIYRFSGAQLSLTTAFHQTFGEGEHCHLDT
TYRFNSRIGDIANRFVQQNPHQLKKPLNSLTPGDKKAVTLLDESQLDALL
DKLSGYAKEDERILVLARYHHLKPASLQKAATRWPKLQIDFMTIHASKGQ
QADYVILVGLQEGNDGFPAPARESIMESALLPQVEDFPDAEERRLLYVAL
TRARARVWLLFNKDNPSRFVEALKQLDVPVARKP
>gid:63358  hepA  RNA polymerase associated protein
MPFTLGQRWISDTESELGLGTVVAMDARTVTLLFPSTGENRLYARSDSPV
TRVMFNPGDTITSHEGWQLHIDEVKEENGLLVYVGTRLDTEETNVTLREV
LLDSKLVFSKPQDRLFAGQIDRMDRFALRYRARKFQSEQYRMPYSGLRGQ
RTNLIPHQLNIAHDVGRRHAPRVLLADEVGLGKTIEAGMILHQQLLSGAA
ERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYTEAQHDAYNPFETEQ
LVICSLDFARRNKQRLEHLCDAEWDLLVVDEAHHLVWSTDAPSREYMAIE
QLAERVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFEQFVEEQKNYR
PVADAVAMLLAGNKLSNDELNRLGDLIGEQDIEPLLQAANSDRDDAQAAR
DELVSMLMDRHGTSRVLFRNTRNGVKGFPKRELHTVKLPLPTQYQTAIKV
SGIMGARKSPEDRARDMLYPEQIYQEFEGDTGTWWNFDPRVEWLMGYLTS
HRSQKVLVICAKATTALQLEQVLREREGIRAAVFHEGMSIIERDRAAAWF
AEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRAIYDSAYASL
INYLAAPEETDGFDDLIKSCREQHEALKAQLEQGRDRLLEIHSNGGEKAQ
QLAQSIEEQDDDTNLIAFAMNLFDIVGINQDDRGDNLIVLTPSDHMLVPD
FPGLPEDGCTITFERDVALSREDAQFITWEHPLIRNGLDLILSGDTGSST
ISLLKNKALPVGTLLVELVYVVEAQAPKQLQLNRFLPPTPVRMLLDKNGN
NLAAQVEFETFNRQLSAVNRHTGSKLVNAVQQDVHAILQLGETQIEKSAR
ALIDNARREADEKLSGELSRLEALRAVNPNIRDDELAAIDSNRQQVLESL
NQAGWRLDALRLIVVTHQ
>gid:65915  himA  integration host factor (IHF), alpha subunit
MALTKAEMSEYLFDKLGLSKRDAKELVELFFEEIRRALENGEQVKLSGFG
NFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVENASPKEE
>gid:65184  himD  integration host factor (IHF), beta subunit
MTKSELIERLATQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGS
FSLHYRAPRTGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
>gid:68821  hin  H inversion protein
MATIGYIRVSTIDQNIDLQRNALTSANCDRIFEDRISGKIANRPGLKRAL
KYVNKGDTLVVWKLDRLGRSVKNLVALISELHERGAHFHSLTDSIDTSSA
MGRFFFHVMSALAEMERELIVERTLAGLAAARAQGRLGGRPRAINKHEQE
QISRLLEKGHPRQQLAIIFGIGVSTLYRYFPASRIKKRMN
>gid:64467  holA  DNA polymerase III, delta subunit
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAASQGFEEH
HAFTLDPSTDWGSLFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATL
SELLHDDLLLIVRGNKLTKAQENAAWYTALADRSVQVSCQTPEQAQLPRW
VAARAKAQNLQLDDAANQLLCYCYEGNLLALAQALERLSLLWPDGKLTLP
RVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEGSEPVILLRTL
QRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRPMIGDALQRLHPAQLRQ
AVQLLTRTEITLKQDYGQSVWADLEGLSLLLCHKALADVFIDG
>gid:65636  holB  DNA polymerase III, delta prime subunit
MKWYPWLRPAYEKLVESYQAGRGHHALLIQALPGMGDEALCYALSRYLLC
QQPEGHKSCGHCRGCQLMQAGTHPDYYTLTPDKGKSSLGVDAVREVSEKL
YEHSRLGGAKVVWIADAALLTDAAANALLKTLEEPPEQTWFFLASPEPAR
LLATLRSRCRLHHLAPPSESYAMSWLSREVTASQEALLTALRLNAGSPGA
ALALLQSERWAQREALCQALMDSLHTGDWYAVLTALNHEQAPARLHWLAT
LLVDALKRQHGASYLTNVDADAVVAALAGPLSPARIQAILNDVCHCRDQL
LHVTGLNRELVLTDLILRIEHYLQPGTLLPVPHL
>gid:72410  holC  DNA polymerase III, chi subunit
MTTHLNPPQEAPYMKNATFYLLDNDTTVNGLSAVEQLVCEIAAERWRAGK
RVLIACEDEKQAIRLDEALWARPAESFVPHNLAGEGPRGGAPVEIAWPQK
RNSSPRDILISLRTSFADFATAFTEVVDFVPYEETLKQLARERYKAYRVA
GFNLNTATWK
>gid:72560  holD  DNA polymerase III, psi subunit
MTSRRDWQLQQLGITQWALRRPGALQGEIAISLPAHVRLIVVAEELPALN
EPLMRDILRALTVSPDQVLPLTPERVAMLPQGSRCNSWRLGTDAPLQLEG
AQVTTPAFNELRANPAARAALWQQICEHEHDFYPQHDRSPRSLAD
>gid:66483  hrpA  ATP-dependent helicase
MTEQSTLTLQVLQQRLDALMLRDKQRFARRLHGVKKVKNPDAQQAIFQTM
AKEIEQAAAQVALREAARPSITYPQNLPVSQKKQDILEAIRDHQVVIVAG
ETGSGKTTQLPKICMELGRGIKGLIGHTQPRRLAARTVANRIAEELQTEP
GGCIGYKVRFSDHVSSNTMVKLMTDGILLAEIQQDRLLMQYDTLIIDEAH
ERSLNIDFLLGYLKELLPRRPDLKVIITSATIDPERFSRHFNNAPIIEVS
GRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGRESPGDILIFMSGE
REIRDTADALNKLNLRHTEVLPLYARLSNSEQNRVFQSHSGRRIVLATNV
AETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRC
GRVSEGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTALGLGDIAA
FPFVEAPDKRNIQDGVRLLEELGAITADEQQTAYKLTPLGRQLSQLPVDP
RLARMVLEAQKHGCVREAMIITSALSIQDPRERPVDKQQASDEKHRRFHD
KESDFLAFVNLWNYLGEQQKALSSNQFRRLCRTDYLNYLRVREWQDIYTQ
LRQVVKELGIPVNSEPAEYREIHVALLTGLLSHIGMKDADKQEYTGARNA
RFSIFPGSGLFKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLI
KRSYSEPHWERAQGAVMATEKVTVYGLPIVAARKVNYSQIDPALCRELFI
RHALVEGDWQTRHAFFRENLKLRAEVEELEHKSRRRDILVDDDTLFEFYD
QRISHDVISARHFDSWWKKISRETPDLLNFEKSMLIKEGAEKISKLDYPN
FWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVDESGFEWQIPGLRR
ELVIALIKSLPKPVRRNFVPAPNYAEAFLGRVTPLELPLLDALERELRRM
TGVTVDREDWHWDQVPEHLKITFRVVNDKNKKLQEGRSLAELKNALKGKV
QETLSAVADDGIEQSGLHIWSFGELPESYEQKRGNYKVKAWPALVDERDS
VAIKLFDNPLEQQQAMWCGLRRLLLLNIPSPIKYLHEKLPNKAKLGLYFN
PYGKVLELIDDCIACGVDKLIDANGGPVWSEAGFTALHEKVRAELNDTVV
DIAKQVERILTTVFNINKRLKGRVDMSMALGLSDIKAQMSGLVYRGFVTG
NGFKRLGDTLRYLQAIEKRLEKLAVDPHRDRAQMLKVESVQQAWQQWINK
LPPARREDDDVKEIRWMIEELRVSYFAQQLGTPYPISDKRILQAMDQITA
>gid:63572  hrpB  ATP-dependent helicase
MLQCGAKKVNPVEPFVTSLPVAAVLPELLTALKIAPQVLLSAPTGAGKST
WLPLQLLQQGPVAGKILLLEPRRLAARNVAQRLAEALNEKPGETVGYRMR
AQSCVGPRTRLEVVTEGVLTRMIQRDPELRGVGLVILDEFHERSLQADLA
LALLLDIQQGLRDDLRLLIMSATLDNDRLCQRLPDAPTIVSEGRAFPVER
RYQPLAAHLRFDEAVAMATAELLRNENGSLLLFLPGVGEIQRVHEHLASR
VGSDVLLCPLYGALSLEAQRKAIVPAPAGMRKVVLATNIAETSLTIEGIR
LVVDSAQERVARFDARTGLTRLVTQRISQASMTQRAGRAGRLAPGICLHL
LAKEQAERAAAQSDPEILHSDLSGLLMEVLQWGCHDPASLFWLDRPPEVN
LQAARRLLLMLGALEGERLSARGRKMAAMGNDPRLAAMLVNAGEGDSAAT
AAMLAAILEDPPRGGGTDLSVVFSRRQPGWQQRSQQLLKRLQVRNGEPDS
ALIMPLLARAFSDRIARRRGQEGRYQLANGMGAMLDADDALGRHEWLIAP
LLLQGSASPDARILLAQPLDIASLIQACPDLLRQSDTVEWDEAQGTLKAW
RRMRIGQLTVSVQPLAKPSEEELHQAMLNGIRDKGLSVLNWTPEAEQFRL
RLHCAAKWLPEYDWPAVDEASLLATLENWLLPHMTGVQSLRGLKSLNVNQ
ALRGLLDYAMLQRLDSELPGHYTVPTGSRITIRYHEDNPPALAVRMQEMF
GEAKTPTIAQGRVPLVLELLSPAQRPLQITRDLSAFWQGAYREVQKEMKG
RYPKHVWPDDPANTAPTRRTKKYS
>gid:71746  hupA  DNA-binding protein HU-alpha
MNKTQLIDVIADKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTF
KVNHRAERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVK
>gid:64090  hupB  DNA-binding protein HU-beta, NS1 (HU-1)
MNKSQLIEKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTF
AVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN
>gid:68138  lig  DNA ligase
MEPIEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELEAQRP
DLITPDSPTQRVGAAPLTAFNQIRHEVPMLSLDNVFDEESFLAFNKRVQD
RLKSTENVIWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVR
TIRAIPLKLHGDNIPARLEVRGEVFLPQAGFEKINEDARRTGGKVFANPR
NAAAGSLRQLDPRITAKRPLTFFCYGVGILEGGELPDTHLGRLLQFKAWG
LPVSDRVTLCDSPQAVLDFYHNVEKDRPTLGFDIDGVVIKVNSLALQELL
GFVARAPRWAVAFKFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVQVAG
VLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLSERPEETR
PIVFPTHCPVCGSDVERVEGEAVTRCTGGLICGAQRKESLKHFVSRRAMD
VDGMGDKIIDQLVEREYVHTPADLFRLTAGKLTGLDRMGPKSAQNVVNAL
EKSKTTTFARFLYALGIREVGEATAAGLAAYFGTLEALQAATIDELQKVP
DVGIVVATHVFNFFAEESNRDVIGQLLAEGVHWPAPVVINVQEIDSPFAG
KTVVLTGSLSQMSRDDAKARLVALGAKVAGSVSKKTDLVIAGEAAGSKLA
KAQELGITVIDEAEMIRLLGA
>gid:65669  mfd  transcription-repair coupling factor
MPEKQRYTLPTKAGDQRQLGELTGAACATLVAEIAERHAGPVVLIAPDMQ
NALRLHDEIRQFTDQMVMNLADWETLPYDSFSPHQEIISSRLSTLYQLPS
MQRGVLIVPVNTLMQRVCPHSYLHGHALVMKKGQRLSRDALRAQLDSAGY
RHVDQVMEHGEYATRGALLDLFPMGSEQPYRLDFFDDEIDSLRLFDADTQ
RTLEEVEAINLLPAHEFPTDKAAIELFRSQWRDTFEVKRDAEHIYQQVSK
GTLPAGIEYWQPLFFSEPLPPLFSYFPANTLVVNTGSLETSAERFQADTL
ARFENRGVDPMRPLLPPEALWLRVDELFSELKRWPRLQLKTDHLPEKAAN
TNLGFQKLPDLAIQAQQKAPLDALRKFLESFSGPVIFSVESEGRREALGE
LLARIKIAPKRILRLDEAQDAGRYLMIGAAEHGFIDTQRNLALICESDLL
GERVARRRLDSRRTINPDTLIRNLAELHVGQPVVHLEHGVGRYAGMTTLE
AGGIKGEYLMLTYANDAKLYVPVSSLHLISRYAGGAEESAPLHKLGGDAW
SRARQKAAEKVRDVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFE
TTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVENHK
QVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMLSRFRSAKEQTQILAEAA
EGKIDILIGTHKLLQSDVKLRDLGLLIVDEEHRFGVRHKERIKAMRADVD
ILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVVRE
AILREILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMREREL
ERVMNDFHHQRFNVLVCTTIIETGIDIPTANTIIIERADHFGLAQLHQLR
GRVGRSHHQAYAWLLTPHPKAMTTDAQKRLEAIASLEDLGAGFALATHDL
EIRGAGELLGEEQSGSMETIGFSLYMELLENAVDALKAGREPSLEDLTSQ
QTEVELRMPSLLPDDFIPDVNTRLSFYKRIASAKNENELEEIKVELIDRF
GLLPDPARNLLDIARLRQQAQKLGIRKLEGNEKGGTIEFAEKNHVDPAWL
IGLLQKQPQHFRLDGPTRLKFIQDLSERKTRIDWVRQFMQQLEENAIA
>gid:63886  mod  DNA methylase; restriction system
MLKDNQKHNESVAPNSAFLSELQRALPEFFTADRYNEQGELIAKGGFDLA
RFERALKARNIDELTSGYQIDFIGKDYAKKQAGEKSVTVIVPDVEHNTLA
ENKNSHNLFLTGDNLDVLRHLQNNYADTVDMIYIDPPYNTGSDGFVYPDH
FEYSDRALQDMFGLNDTELARLKSIQGKSTHSAWLSFMYPRLFLARKLLK
DTGFIFISIDDNEYANLKLMMDEIFGEGGFVTNVMWKRKKEISNDSDNVS
IQGEYILVYAKTGQGALRLEPLSKEYIQKSYKEPTEQFPEGKWRPVPLTV
SKGLSGGGYTYKITTPNGTVHERLWAYPEASYQKLVADNLVYFGKDNGGI
PQRVMYAHHSKGQPTTNYWDNVASNKEGKKEILDLFGDNVFDTPKPTALL
KKIIKLAIDKDGVVLDFFAGSGTTAHAVMALNEEDGGQRTFILCTIDQAL
SNNTIAKKAGYNTIDEISRERITRVAAKIRANNPATNSDLGFKHYRFATP
TQQTLDDLDSFDIATGHFINTSGQLAAFTESGFTDMINPFSARGLGVPGG
ASGEETLLTTWLVADGYKMDIDVQTVDFSGYCARYVDNTRLYLIDERWGT
EQTRDLLNHIGTHQLPVQTIVIYGYSFDLESIRELEIGLKQLDQKVNLVK
RY
>gid:69719  mug  G/U mismatch specific DNA glycosylase
MVKDILAPGLRVVFCGINPGLSSANTGFPFAHPANRFWKVIHLAGFTDRQ
LKPEEAEKLLDFRCGVTKLVDRPTVQATEVKLHELRSGGRNLIEKIEDYQ
PAALAVLGKQAFEQGFSQRGIAWGKQKIAIGATMVWVLPNPSGLNRIKTE
KLVEAYRELDQALIMRGL
>gid:69286  mutH  methyl-directed mismatch repair protein
MSALCPLLTPPASEALLLAQARQLSGYTLGELAAMAGITTPKDLKRDKGW
IGVLLEIWLGASAGSKPEQDFAALGVELKTIPVDSLGRPLETTFVCVAPL
TGNSGVTWETSHVRHKLKRVLWVPVEGDRSIPLAERRVGSPLLWSPSEEE
DRQLRLDWEELMDMIVLGQVERITARHGEVLQLRPKAANARALTEAIGAR
GEPILTLPRGFYLKKNFTQALLARHFLLQNP
>gid:72173  mutL  enzyme in methyl-directed mismatch repair
MPIQVLPPQLANQIAAGEVVERPASVVKELVENSLDAGATRVDIDIERGG
AKLIRIRDNGCGIKKEELALALARHATSKIASLDDLEAIISLGFRGEALA
SISSVSRLTLTSRTAEQAEAWQAYAEGRDMDVTVKPAAHPVGTTLEVLDL
FYNTPARRKFMRTEKTEFNHIDEIIRRIALARFDVTLNLSHNGKLVRQYR
AVAKDGQKERRLGAICGTPFLEQALAIEWQHGDLTLRGWVADPNHTTTAL
TEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEIDPHQVD
VNVHPAKHEVRFHQSRLVHDFIYQGVLSVLQQQTETALPLEEIAPAPRHV
QENRIAAGRNHFAVPAEPTAAREPATPRYSGGASGGNGGRQSAGGWPHAQ
PGYQKQQGEVYRTLLQTPTASPAPESVTPALDGHSQSFGRVLTIVGGDCA
LLEHAGTIQLLSLPVAERWLRQAQLTPGQSPVCAQPLLIPLRLKVSADEK
AALQKAQSLLGELGIEFQSDAQHVTIRAVPLPLRQQNLQILIPELIGYLA
QQTTFATVNIAQWIARNVQSEHPQWSMAQAISLLADVERLCPQLVKAPPG
GLLQPVDLHSAMNALKHE
>gid:70800  mutM  formamidopyrimidine DNA glycosylase
MPELPEVETSRRGIEPHLVGATILHAHIRNGRLRWPVSDEIYRLSDTPVL
SVQRRAKYLLLELPDGWIIIHLGMSGSLRILPEALPAEKHDHVDLVMSNG
KILRYTDPRRFGAWLWTKELEGHNVLAHLGPEPLSDEFNGEYLQQKCAKK
KTAIKPWLMDNKLVVGVGNIYASESLFAAGIHPDRLASSLSTEECDLLAR
VIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRKGEPCRVCGTP
IVATKHAQRATFYCRHCQK
>gid:69091  mutS  methyl-directed mismatch repair
MNESFDKDFSNHTPMMQQYLKLKAQHPEILLFYRMGDFYELFYDDAKRAS
QLLDISLTKRGASAGEPIPMAGIPHHAVENYLAKLVNQGESVAICEQIGD
PATSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDGKGYGYATL
DISSGRFRLSEPADRETMAAELQRTNPAELLYAEDFAEMALIEGRRGLRR
RPLWEFEIDTARQQLNLQFGTRDLVGFGVENASRGLCAAGCLLQYVKDTQ
RTSLPHIRSITMERQQDSIIMDAATRRNLEITQNLAGGVENTLAAVLDCT
VTPMGSRMLKRWLHMPVRNTDILRERQQTIGALQDTVSELQPVLRQVGDL
ERILARLALRTARPRDLARMRHAFQQLPELHAQLETVDSAPVQALRKKMG
DFAELRDLLERAIIDAPPVLVRDGGVIAPGYHEELDEWRALADGATDYLD
RLEIRERERTGLDTLKVGYNAVHGYYIQISRGQSHLAPINYVRRQTLKNA
ERYIIPELKEYEDKVLTSKGKALALEKQLYDELFDLLLPHLADLQQSANA
LAELDVLVNLAERAWTLNYTCPTFTDKPGIRITEGRHPVVEQVLNEPFIA
NPLNLSPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQNVEIG
PIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEIGRG
TSTYDGLSLAWACAENLANKIKALTLFATHYFELTQLPEKMEGVANVHLD
ALEHGDTIAFMHSVQDGAASKSYGLAVAALAGVPKEVIKRARQKLRELES
ISPNAAATQVDGTQMSLLAAPEETSPAVEALENLDPDSLTPRQALEWIYR
LKSLV
>gid:63462  mutT  7,8-dihydro-8-oxoguanine-triphosphatase
MKKLQIAVGIIRNPNDEIFITQRAADAHMANKLEFPGGKIEAGETPEQAL
IRELQEEVGITPTQVTLFDTLEYQFPDRHITLWFWLVERWEGEPWGKEGQ
PGRWIAQNALSTDDFPPANEPIIRKLRQFAL
>gid:69510  mutY  adenine DNA glycosylase
MQASQFSAQVLDWYDKYGRKTLPWQINKTPYKVWLSEVMLQQTQVTTVIP
YFERFMARFPTVTDLANAPLDEVLHLWTGLGYYARARNLHKAAQQVATLH
GGEFPQTFAEIAALPGVGRSTAGAILSLALGKHYPILDGNVKRVLARCYA
VSGWPGKKEVENTLWTLSEQVTPARGVERFNQAMMDLGAMVCTRSKPKCT
LCPLQNGCIAAAHESWSRYPGKKPKQTLPERTGYFLLLQHNQEIFLAQRP
PSGLWGGLYCFPQFAREDELREWLAQRHVNADNLTQLNAFRHTFSHFHLD
IVPMWLPVSSLDACMDEGSALWYNLAQPPSVGLAAPVERLLQQLRTGAPV
>gid:64634  nei  endonuclease VIII
MPEGPEIRRAADNLEAAIKGKPLTDVWFAFAQLKPYESQLTGQLVTRIET
RGKALLTHFSNGLTLYSHNQLYGVWRVIDTGEIPQTTRILRVRLQTADKT
ILLYSASDIEMLTAEQLTTHPFLQRVGPDVLDARLTPEEVKARLLSPRFR
NRQFSGLLLDQSFLAGLGNYLRVEILWQVGLTGQHKAKDLNEAQLNALSH
ALLDIPRLSYTTRGQADENKHHGALFRFKLFHRDGEACERCGGIIEKTTL
SSRPFYWCPHCQK
>gid:71743  nfi  endonuclease V
MDLASLRAQQIELASSVCREDRLDKDPPAFIGGADVGFEQGGEVTRAAMV
LLKYPSLELVEYKVARIATTMPYIPGFLSFREYPALLAAWEQLSQKPDLL
FVDGHGISHPRRLGVASHFGLLVDVPTIGVAKKRLCGKFEPLSAEPGALS
PLMDKGEQLAWVWRSKARCNPLFIATGHRVSTDSALAWVQRCMKGYRLPE
PTRWADAVASGRPAFVRWQEIQR
>gid:67650  nfo  endonuclease IV
MKYIGAHVSAAGGLANAPARAAEIGATAFALFTKNQRQWRAAPLTPQVID
DFKIACEKYHFSAAQILPHDSYLINLGHPVSEALEKSRDAFLDEMQRCEQ
LGLTLLNFHPGSHLMQIAQEDCLARIAESINIALAQTEGVTAVIENTAGQ
GSNLGFEFEQLAAIIDGVEDKSRVGVCIDTCHAFAAGYDLRTPEACEKTF
AEFGKIVGFQYLRGMHLNDAKSAFGSRVDRHHSLGEGNIGHDAFRWIMQD
GRFDGIPLILETINPDIWAEEIAWLKAQQIAEAMA
>gid:66131  nth  endonuclease III
MNKAKRLEILTRLRDNNPHPTTELNFTSPFELLIAVLLSAQATDVSVNKA
TAKLYPVANTPAAMLELGVEGVKSYIKTIGLFNSKAENVIKTCRILLDKH
NGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTQF
APGKNVEQVEEKLLKVVPNEFKVDCHHWLILHGRYTCIARKPRCGSCLIE
DLCEYKEKVDI
>gid:67034  ntpA  dATP pyrophosphohydrolase
MKDKVYKRPVSVLVVIFAQDTKRVLMLQRRDDPDFWQSVTGSIEEGETAL
QAAVREVKEEVTIDVAAEQLTLIDCQRTVEFEIFSHLRHRYAPGVMHNTE
FWFCLALPHERQVIFTEHLTYQWLDAPDAAALTKSWSNRQAIEEFVINVA
>gid:66517  ogt  O-6-alkylguanine-DNA
MLRLLEEKIATPLGPLWVVCDEQFRLRAIEWEQYRDRMEQLLNIHYRHEG
YERVSATNPGGLSDKLADYFAGNLAVIDTLETATGGTPFQREVWQALRAI
PCGQVMHYGQLAAQLGRPGAARAVGAANGANPISIVVPCHRVIGRNGTLT
GYAGGVQRKEWLLRHEGYLLL
>gid:69642  parC  DNA topoisomerase IV, subunit A
MSDMAERLALHEFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIVYAMS
ELGLNATAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLV
DGQGNWGAPDDPKSFAAMRYTESRLSKYAELLLSELGQGTADWVPNFDGT
MQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNLREVAKAAITLIEQPK
TTLDQLLDIVQGPDYPTEAEIITPRAEIRKIYENGRGSVRMRAVWTKEDG
AVVISALPHQVSGAKVLEQIAAQMRNKKLPMVDDLRDESDHENPTRLVIV
PRSNRVDMEQVMNHLFATTDLEKSYRINLNMIGLDGRPAVKNLLEILTEW
LAFRRDTVRRRLNYRLEKVLKRLHILEGLLVAFLNIDEVIEIIRSEDEPK
PALMSRFGISETQAEAILELKLRHLAKLEEMKIRGEQDELEKERDQLQGI
LASERKMNTLLKKELQADADAYGDDRRSPLREREEAKAMSEHDMLPSEPV
TIVLSQMGWVRSAKGHDIDAPGLNYKAGDSFKAAVKGKSNQPVVFIDTTG
RSYAIDPITLPSARGQGEPLTGKLTLPPGATVEHMLMEGDDQKLLMASDA
GYGFVCTFNDLVARNRAGKTLITLPENAHVMPPLVIEDEHDMLLAITQAG
RMLMFPVDSLPQLSKGKGNKIINIPSAEAAKGDDGLAHLYVLPPQSTLTI
HVGKRKIKLRPEELQKVVGERGRRGTLMRGLQRIDRIEIDSPHRVSHGDS
EE
>gid:69656  parE  DNA topoisomerase IV, subunit B
MTQTYNADAIEVLTGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAG
HAKRVDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGKF
SNKNYQFSGGLHGVGISVVNALSKRVEVTVRRDGQVYNIAFENGEKVQDL
QVVGTCGKRNTGTSVHFWPDESFFDSPRFSVSRLMHVLKAKAVLCPGVEI
TFKDEVNNSEQRWCYQDGLNDYLGEAVNGLPTLPEKPFIGNFNGETEAVD
WALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMREFCEYRNI
LPRGVKLSAEDIWDRCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGVV
KDAFSLWLNQNVQAAEQLAEMAIASAQRRLRAAKKVVRKKLTSGPALPGK
LADCTAQDLNRTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWEV
SSDEVLASQEVHDISVAIGIDPDSDDLSQLRYGKICILADADSDGLHIAT
LLCALFVRHFRALVKNGHVYVALPPLYRIDLGKEVYYALTEEEKAGVLEQ
LKRKKGKPNVQRFKGLGEMNPMQLRETTLDPNTRRLVQLTISDEDDQRTN
AMMDMLLAKKRSEDRRNWLQEKGDLADLDV
>gid:64600  phrB  deoxyribodipyrimidine photolyase (photoreactivation)
MPTHLVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQAHDMAPR
QAAFISAQLNALQTALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHL
FYNYQYEFNERQRDAAVEKTLPSVICEGFDDSVILAPGAVMTGNHEMYKV
FTPFKNAWLKRLKEDIPPCVPAPKIRVSGALSTPLTPVSLNYPQQAFDAA
LFPVEENAVIAQLRQFCAQGADEYALRRDFPAVDGTSRLSASLATGGLSP
RQCLHRLLAEQPQALDGGPGSVWLNELIWREFYRHLMTWYPALCKHQPFI
RWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITA
SFLVKDLLIDWRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRI
FNPTTQGERFDRDGEFIRQWLPALRDIPGKAIHEPWRWAEKAGVVLDYPR
PIVEHKQARIATLSAYEAARKGA
>gid:71366  polA  DNA polymerase I
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLI
MQYQPTHAAVVFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHAMVK
AMGLPLLAVSGVEADDVIGTLAREAEKVGRPVLISTGDKDMAQLVTPNIT
LINTMTNTILGPDEVVNKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKT
AQALLQGLGGLDTLYAEPEKIAGLTFRGAKTMAGKLAQNKDVAYLSYKLA
TIKTDVELELTCEQLEVQQPIADELLGLFKKYEFKRWTADVESGKWLQAK
GAKPAAKPQETVVIDESPSEPAAALSYENYVTILDDVTLESWIEKLKKAP
VFAFDTETDSLDNIAANLVGLSFAIEPGVAAYVPVAHDYLDAPDQISRQR
ALELLKPLLEDEKVRKVGQNLKYDRGVLQNYGIELRGIAFDTMLESYILN
SVAGRHDMDSLSDRWLKHKTITFEDIAGKGKNQLTFNQIALEEAGRYAAE
DADVTLQLHLKMWPELQQHKGPLNVFENIEMPLVPVLSRVERNGVKIDPA
VLHKHSEEITLRLAELEKKAHDIAGEAFNLSSTKQLQTILFEKQGIKPLK
KTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINP
KTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYL
IVSADYSQIELRIMAHLSRDKGLLTAFAEGKDIHRATAAEVFGLPLDSVT
GEQRRSAKAINFGLIYGMSAFGLSRQLNIPRKEAQKYMDLYFERYPGVLE
YMERTRAQAKEQGYVETLEGRRLYLPDIKSSNAARRAGAERAAINAPMQG
TAADIIKRAMIAVDAWLQAEQPRVRMIMQVHDELVFEVHKDDLDAVAKRI
HQLMENCTRIDVPLLVEVGSGENWDQAH
>gid:63359  polB  DNA polymerase II
MAQAGFILTRHWRDTPQGTEVSFWLATDNGPVQATLAPQESVAFIPTSQT
SRAASLLQAEKDYRLTPLQLRDFHRQPVSGLYCRTHRQLMRMEKLLRENG
VTVYEADVRPPERYLMERFITSPVWVDGEMRNGVIRNARLKPHSDYRPPL
KWVSLDIETTRHGELYCIGLEGCGQRTVYMLGPANGDDHQLDFELVYVAS
RPQLLEKLNAWFAEHDPDVIIGWNVVQFDLRMLQKHAERYRIPLRLGRDN
SELEWREHGFKNGVFFAQARGRVIIDGIDALKSAFWNFSSFSLEAVSQEL
LGEGKSIDNPWDRMDEIDRRFAQDKPALATYNLKDCELVTRIFHKTEIMP
FLLERATINGLPVDRHGGSVAAFGHLYFPRMHRAGYVAPNLGEVPPLASP
GGYVMDSQPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVEGMAQPDPEHS
TEGFLDAWFSREKHCLPEIVSQIWHGRDEAKRQGNKPLSQALKIIMNAFY
GVLGTTACRFFDPRLASSITMRGHAIMRQTKALIEAQGYDVIYGDTDSTF
VWLRRAHSEADAAEIGHRLVRHVNEWWAQTLQQQNLTSALELEFETHFCR
FLMPTIRGADTGSKKRYAGLIQEGDSQRMVFKGLETVRTDWTPLAQRFQQ
ELYLRVFRNEPYQDYVRETIDKLMAGELDAQLVYRKRLRRPLHEYQRNVP
PHVRAARLADEQNLKQGRPAQYQNRGAIKYVWTVNGPEPVDYQQSPLDYE
HYLTRQLQPVAEGILPFVEDNFATLLTGQLGLF
>gid:71593  priA  primosomal protein N'
MSVAHVALPVPLPRTFDYLLPEGGVAKAGCRVRVPFGKQQERVGIVVSIS
DHSELPLDELKSVIEILDNEPIFSPSIWRLLLWAADYYHHPLGDVLFHAL
PVLLRQGKPASNAPLWYWFATEEGQAVDINSLKRSAKQQQALAALRQGKI
WRYQVAELDFTDATLQTLRRKGLCELASETPAFTDWRERYAVAGERLRLN
TEQATAVGAIHSASDGFSAWLLAGVTGSGKTEVYLSVLENVLAQGKQALV
MVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSSLFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQI
PIILGSATPALETLCNVRQKKYRMLRLTRRAGNARPALQHVLDLKGQRLQ
AGLAPALIARMRQHLQADNQVILFLNRRGFAPALLCHDCGWIAECPRCDH
YYTLHQAQHHLRCHHCDSQRPVPRQCPSCGSTHMLPVGLGTEQLEQVLAP
FFPGVPISRIDRDTTSRKGALEQHLAEVHRGGARILIGTQMLAKGHHFPD
VTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERQTLQLPPWTSHVIIRAEDHNNQQAP
VFLQQLRNLIQASPLSDDKLWILGPVPALAPKRGGRYRWQILLQHPSRIR
LQHIISGTLALINTLPEARKVKWVLDVDPIEG
>gid:72242  priB  primosomal replication protein N
MTNRLALSGTVCRAPLRKVSPSGIPHCQFVLEHRSVQEEAGFHRQAWCQM
PVIVSGHENQAITHSITVGSRITVQGFISCHKAKNGLSKMVLHAEQIELI
DSGD
>gid:64146  priC  primosomal replication protein N
MLLQTLEERLATLRQRCAPLAQHATLSARFDRHLFRTRSTLLQGYLEEAG
ANLVALRQAVKHEQLPQVAWLAEHLASQLEAISRETAAWSLRQWDAAAPG
LGRWQRRRIQHQEFERRLLAMTQERKIRLAQATGLVEQQTLQKEVEIYEG
RLARCRHALEKIENVLARLTR
>gid:70806  radC  putative DNA repair protein
MDTLDELLPREKMLRSGIASLSDVELLALFLRTGTPGKDVMTLAKEILQH
FGSLYGLLSADFAQFRGVNGIGLAKFAQLKGIAELARRYYSVRMNEESAL
LSPEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQHSRLFSGTLNHVEVH
PREIVREAIKLNASAVILAHNHPSGCAEPSKADKLITERVIKCCQFMDIR
VLDHLIIGRGEYVSFAERGWI
>gid:63958  rdgC  putative exonuclease involved in removal of stalled replication fork
MLWFKNLMVYRLSRDITLRAEEMEKQLASMTFTPCGSQDMAKMGWVPPMG
SHSDALTHTANGQIIICARKEEKILPSPVIKQALEAKIQKLEADQGRKLK
KTEKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDT
LALLRKSLGSLPVVPLALENPIELTLTEWVRSGTVAQGFQLLDEAELKAM
LEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRIQFVMCDDGSI
KRLKFCDELRDQNEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGE
AQR
>gid:68931  recA  DNA strand exchange and recombination protein
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDI
ALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHAL
DPVYARKLGVDIDNLLCSQPDTGEQALEICDALARSGAVDVIVVDSVAAL
TPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKQSNTLLIFINQIRMKI
GVMFGNPETTTGGNALKFYASVRLDIRRIGAVKEGDNVVGSETRVKVVKN
KIAAPFKQAEFQILYGEGINFYGELVDLGVKEKLIEKAGAWYSYNGEKIG
QGKANATTWLKENPATAKEIEKRVRELLLSNQNATPDFAVDDSEGVAETN
EDF
>gid:69264  recB  exonuclease V, beta chain
MNDVAETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAF
PRPLTVEELLVVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYARL
LEEISDKKQAAQWLLLAERQMDEAAVFTIHGFCQRMLSLNAFESGMLFEQ
QLIEDESLLRYQACADFWRRHCYPLPRDIAQVVFDVWKGPKALLKDIDRY
LQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAVSELDALIESS
GIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKA
GGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVAQEKRRRGELG
FDDMLSRLDTALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRI
WRHQPDTALLLIGDPKQAIYAFRGADIFTYMKARSEVSAHYTLDTNWRSA
PGMVNSVNKLFSQMNDAFMFRDIPFSPVKFAPRNQSLQFKVNDAPQPAMT
LWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALLTNGDSSRPVR
ASDISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDAVVEEFDGYRQ
IWHKRGVMPMLRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQ
LESEHALVRWLAQHILEPDSNASSQQLRLESDKHLVQIVTIHKSKGLEYP
LVWLPFITHFRVQDQAFYHDRHSYEAVLDLSHAEESIALAEAERLAEDLR
LLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGRLLQKGEPMDA
AGLRACIEALCDEDIVCRTPGNTDNDRWQIAAASHAELSARALQRLLYDS
WRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEAAEAPAMTPHHFPRGAS
PGTFLHSLFEELDFTQPINPQWVQEKLELSGFETRWEPVLTRWLDTVLHV
PLNETGVSLSVLTEREKQVEMEFYLPIAQPLTAGELDALIRRYDPLSAGC
PALDFMQVRGMLKGFIDLVFRYEGRYYLLDYKSNWLGEDSAAYTQTAMAA
AMQAHRYDLQYQLYTLALHRYLRHRMTNYDYERHFGGVIYLFLRGVDGER
PQQGIFTTRPAAALINQLDDMFAGEMSEEAQ
>gid:69268  recC  exonuclease V, subunit
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTL
SQKFGIAANIAFPLPASFIWEMFVRVLPDIPKESAFSKQSMSWKLMTLLP
QLLDKDEFVLLRHYLTDDTDKRKLFQLSARAADLFDQYLVYRPDWLTQWE
AGKTVEGLGEAQNWQAPLWKALVEYTAALGQPRWHRANLYQRFIQTLESA
TACPPGLPSRVFICGISALPPVYLRALQALGKHIEIHLLFTNPCRYYWGD
IKDPAWLAKLMARQRRHSFEDRHLPLFRENQNPEALFNSDGEQDIGNPLL
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHRIQADILELESHAV
AGVNLEEYSRSDNKRLLDPEDNSLSFHVCHSPQREVEILHDRLLAMLEAD
PTLTPRDIIVMVADIDSYSPFIQAVFGSAPTERYLPYAISDRRARQSHPV
LQAFISLLSLPDSRFVSEDVLALLDVPVLAARFTINEEGLRYLRLWVNES
GIRWGIDDDNVRELELPATGQHTWQFGLTRMLLGYAMESAQGEWQSVLPY
DESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMFNDFFL
PDADTEAAMTLIEQQWQAIIAEGVAAEYGDAVPISLLRDELAQRLDQERI
SQRFLAGPINICTLMPMRSIPFRVVCLLGMNDGVYPRHVAPLGFDLMSQK
PMRGDRSRRDDDRYLFLEALISAQQTLYISYIGRSIQDNSERFPSVLVQE
LVDYIGQSHYLPGDETLTCDESEARVKAHITRLHTRMPFDAQNYQPGEQQ
SYAREWLPAASQSGKAHSDFVQPLPFTMPETLTLESLQRFWAHPVRAFFQ
MRLQVNFRSEESEIPDAEPFELEGLTRYQLNQQLLNTLVEEDDAERLFRR
FRAAGELPYGAFGEIFWDAQCQEMQQLASRVIACRKPSQSLEVDLLCNGV
QLTGWLPQVQEDGLLRWRPALISVAQGVQLWLEHLVYCASGGSGESRLFL
RKEGEWRFPPLDKTQAMAYLAQLIEGYREGMSSPLLVLPESGGAWIKACY
DAENDVMLDDDDTLQKARTKFLQAYEGNMMVSGEGEDIWYQRLWRQLESE
TLQAIIAQSRHYLLPLFRFNQSR
>gid:69263  recD  exonuclease V, alpha chain
MTIQERLLEAVEQKLLRPIDAQFALTVAGNDDPAVTLAAALLSHDAGEGH
VCLPLSRLTLTEEAHPLLVACISETATPIDWKKRLLASAAVSCGDSPAPL
ILCGERLYLNRMWCNERTVARFFNEVNQAIAVDEDQLSRILDALFPPTDE
VNWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIR
LAAPTGKAAARLTESLGAALRQLPLTDAQKKRIPEDASTLHRLLGAQPGS
QRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDSLPPHGRVIFLGDRDQ
LASVEAGAVLGDICAYVNAGFTAERARQLSRLTGSAIPAGAGTQAASLRD
SLCLLQKSYRFGSDSGIGKLAAAINCGDRSAIQAVFQQGFSDIEKRTLQS
SDDYAGMLDEALAGYGRYLRLLHEKATPEAILQAFNEYQLLCALREGPFG
VRGLNDRIEQAMVQQRKIQRHPHSRWYEGRPVMIARNDSALGLFNGDIGI
ALDRGQGLRVWFVMPDGTIKSVQPSRLPEHDTTWAMTVHKSQGSEFDHAA
LILPSQRSPVVTRELVYTAVTRARRRLSLYADERILAGAIVTRTERRSGL
ATLFDEVSRTG
>gid:71033  recF  gap repair protein
MSLTRLLIKDFRNIENADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGR
AFRSLQPGRVIRHEQEAFVLHGRLQSEERETSIGLTKDKQGDSKVRIDGT
DGHKIAELAHLMPMQLITPEGFTLLNGGPKYRRAFLDWGCFHNEAGFFTA
WSNLKRLLKQRNAALRQVSRYEQLRPWDKELIPLAEQISTWRAEYSSAIA
QDMADTCQQFLPEFSLTFSFQRGWEKETDYADVLERSFERDRMLTYTAHG
PHKADFRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL
IDDFASELDDARRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTV
EKGKITD
>gid:70835  recG  DNA helicase
MSGRLLDAVPLNSLTGVGAAQSSKLAKIGLHTVQDLLLHLPLRYEDRTHL
YPIGELLPGIYATVEGEVLNCNITFGGRRMMTCQISDGSGILTMRFFNFN
AAMKNSLATGRRVLAYGEAKRGKYGAEMIHPEYRLQGDLSTPELQETLTP
VYPTTEGVKQATLRKLTDQALELLDTCAIAELLPPELAQGMMSLPEALRT
LHRPPPTLQLADLETGKHPAQRRLILEELLAHNLSMLALRAGAQRYHAQP
LSTNNILKDKLLASLPFKPTSAQARVVAEIERDMALDVPMMRLVQGDVGS
GKTLVAALAALRAIAHGKQVALMAPTELLAEQHANNFRNWFEPLGVEVGW
LAGKQKGKARQAQQEAIASGQVQMIVGTHAIFQEQVQFNGLALVIIDEQH
RFGVHQRLALWEKGQQQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
LPPGRTPVTTVAIPDTRRHEIIDRVRNACTTEGRQAYWVCTLIEESDLLE
AQAAEATWEELKLALPELNIGLVHGRMKPAEKQAVMQAFKQGELHLLVAT
TVIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGAVASHCVLLYKS
PLSKTAQKRLQVLRDSNDGFVIAQKDLEIRGPGELLGTRQTGNAEFKVAD
LLRDQAMIPEVQRIARHIHERYPQQAQALIERWMPETERYSNA
>gid:69361  recJ  ssDNA exonuclease,
MKQQRQLRRREADETAELPADLPPLLRRLYASRGVRSARELERSVKGMLP
WQQLSGIDNAVEILYNAFREGTRIIVVGDFDADGATSTALSVLGMRALGC
DNISYLVPNRFEDGYGLSPEVVDQAKARGAQLIVTVDNGISSHAGVAHAK
TLGIPVIVTDHHLPGDTLPDAEAIINPNLRDCEFPSKSLAGVGVAFYLML
ALRTFLRDKGWFDERNIAPPNLAELLDLVALGTVADVVPLDANNRILTWQ
GLSRIRAGKCRPGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNLGEARVLASELDALNQTRKEIEQGMQAEALILCEKLERS
SETLPGGLAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSG
RSIQGLHMRDALERLDTLYPDLMIKFGGHAMAAGLSLEEHKFEQFQQRFG
ELVTEWLDPALLQGEVISDGPLSAAEMSMEVAQLLRDAGPWGQMFPEPLF
DGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNIDTTCWPDNGVREV
ELAYKLDINEFRGNRSLQIIIDDIWPL
>gid:68660  recN  protein used in recombination and DNA repair
MLAQLTISNFAIVRELEIDFQSGMTVITGETGAGKSIAIDALGLCLGGRA
EADMVRTGATRADLCARFALKDTPAALRWLEENQLEEGRECLLRRVISSD
GRSRGFINGTAVPLSQLRELGQLLIQIHGQHAHQQLTKPEQQKSLLDSYA
NEAALAQQMAARYQLWHQSCRDLAHHQQQSQERAARAELLQYQLKELNDF
NPQAGEFEQIDEEYKRLANSGQLLTTSQNALALLADGEDVNLQSQLYSAK
QLVSELVGMDSKLSGILDMLEEATIQLTEASDELRHYCERLDLDPNRLFE
LEQRIAKQISLARKHHVSPEALPQLYQSLLEEQQQLDDQADSLETLTLAV
NKHHQQALETAQALHQQRQFYAQELGQLITESMHLLSMPHGLFTIDVKFD
EHHLSNDGADRVEFKVTTNPGQPLQPIAKVASGGELSRIALAIQVITARK
METPALIFDEVDVGISGPTAAVVGKLLRQLGESTQVMCVTHLPQVAGCGH
QHFFVSKETDGAMTETHMQPLDKRARLQELARLLGGSEVTRNTLANAKEL
LAA
>gid:68458  recO  gap repair gene
MEGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSNLKGAL
QPFTPLLLRYSGRGEVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVL
EYETRFSELFFDYLNCIQALAGTTGSPEPALRRFELALLGHLGYGVNFTH
CAGSGERVDDTMTYRYREEKGFFASVVIDNNTFTGRHLKALEAREFPDVD
TLRAAKRFTRMALKPYLGGKPLKSRELFRQFMPKRTVKTKKD
>gid:71286  recQ  ATP-dependent DNA helicase
MVNGVNVAQAEVLNLESGAKQVLQETFGYQQFRPGQEAIIDTALSGRDCL
VVMPTGGGKSLCYQIPALLLDGLTVVVSPLISLMKDQVDQLLANGVAAAC
LNSTQSREQQLEVMAGCRTGQIRLLYIAPERLMLDNFLDHLAHWNPVLLA
VDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQDIIR
LLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCN
SRAKVEDTAARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATV
AFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPAD
MAWLRRCLEEKPAGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQ
EPCGNCDICLDPPKQYDGLNDAQIALSTIGRVNQRFGMGYVVEVIRGANN
QRIRDFGHDKLKVYGMGREKSHEHWVSVIRQLIHLGLVMQNIAQHSALQL
TDAARPVLRGDVPLKLAVPRIVALKPRVMQKSFGGNYDRKLFAKLRKLRK
AIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKE
FMALIRAHVDGDDEE
>gid:64154  recR  putative recombination protein, gap repair
MQTSPLLTQLMEALRCLPGVGPKSAQRMAFTLLQRDRSGGMRLAQALTRA
MSEIGHCADCRTFTEQDVCNICSNPRRQENGQICVVESPADIYAIEQTGQ
FSGRYFVLMGHLSPLDGIGPDDIGLDRLEQRLASEKISELILATNPTVEG
EATANYIAELCAEAGVEASRIAHGVPVGGELEMVDGTTLSHSLAGRHKII
F
>gid:71198  rep  rep helicase
MRLNPGQQHAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHI
AAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALG
MKSNFSLFDDTDQVALLKELTEGLIEDDKVLLQQLISTISNWKNDLKTPA
QAAAGAKGERDRIFAHCYGLYDAHMKACNVLDFDDLILLPTLLLQRNDEV
RERWQNKIRYLLVDEYQDTNTSQYELVKLLVGQRARFTVVGDDDQSIYSW
RGARPQNLVLLSQDFPALQVIKLEQNYRSSGRILKAANILIANNPHVFEK
RLFSELGYGAELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYR
GNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDS
AFLRIVNTPKREIGPATLQKLGEWAMTRNKSLFTASFDMGLSQKLTGRGY
DSLTRFTHWLGEIQRLAEREPVAAVRDLIHGIDYESWLYETSPSPKAAEM
RMKNVNQLFSWMTEMLEGNELDEPMTLTQVVTRFTLRDMMERGESEEELD
QVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSIDEDNIEEERRLAYVGI
TRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIWEQERKVVSAE
ERMQKGQSHLANLKAMMAAKRAKS
>gid:63888  res  DNA restriction (DNA helicase)
MMNILLEELPHQEQALAAILASFTGIDHAQADHNHYANPLIKERYDDKAN
IDVKMETGTGKTYVYTRLMYELHQKYGLFKFVLVVPTPAIKEGARNFITS
DYARQHFSQFYENTRMELCTINAGDFKVKSGRKNFPAQLLSFTDASRRDS
HTIQVLLINAQMLNSASMTRDDYDQTLLGGLTSPVKGLQMTRPVVIIDEP
HRFARDNKFYRAIQAIQPQMIVRFGATFPDIVEGKGKNKCVRKDYYRRQP
QFDLNAVDSFNDGLVKGIDIYYPNLPEEQANNRYIVDSVTAKKLILRRGS
KIAEVGVGENLADVDAGFEGSIEYAGSKMLSNDLELEAGMALVPGTFGAS
YQELIIQDAIDKHFDTEQANFLRSNEPENNAPRIKTLSLFFIDSIKSYRD
DEGWLKVTFERLLKKKLTQLIDDYQRKTLPREVEYLSFLQATLASLHSDN
QNVHAGYFGEDRGSGDEAIQAEVDDILKNKEKLLSFSDHHGNWETRRFLF
SKWTLREGWDNPNVFVIAKLRSSGSESSKIQEVGRGLRLPVDENGHRVHQ
EEWPSRLSFLIGYDEKAFASMLVDEINRDSKVQLNEQKLDEAMITLIVTE
RQKVDPAFTELRLLEDLDDKKLINRSNEFKPSVTLNGETKSGFAWLLEFY
PELTQARVRADRIRDNKPASRLRVRLRKENWEQLSSIWEQFSRRYMLQFE
RSGASLEQIAAEVLRDPALYIRQKPSQVQQRLVSNEDNGRFEVAQREGEL
AASEFMAGMKYGHFLKQLALRTSLPVNVLHPVLMAMLRDVLHGDSRYLSE
ISLDNMTRALQTRINAHFAQRHDYLPLDFQASTSVFDSTARQFREEISAE
IVGKNVDENAIDDPRSLYQIPPLRYDSVDPELPLLKYDYPQQVSVFGKLP
KRAIQIPKYTGGSTTPDFVYRIERQDADSVYLLVETKAENMRVGDQVILD
AQRKFFDMLRRQNINVEFAEATSAPAVFSTINGLIEGKAN
>gid:71201  rhlB  putative helicase
MSKTHLTEQKFSDFALHPQVVEALEKKGFYNCTPIQALALPLTLAGRDVA
GQAQTGTGKTMAFLTSTFHYLLSHPAIDDRKVNQPRALIMAPTRELAVQI
HADAEPLAQATGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAK
QNHINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPPAAQRLNMLFSAT
LSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSNEEKMRLLQTL
IEEEWPDRAIIFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRA
GASGHSISLACEEYALNLPAIESYIGHSIPVSKYNPEALMNDLPKPLRLT
RSRPGNGPRRAGAPRNRRRSG
>gid:64839  rhlE  putative ATP-dependent RNA helicase
MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTG
KTAGFTLPLLQHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSK
YLNIRSLVVFGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQI
EILVLDEADRMLDMGFIHDIRRVLAKLPAKRQNLLFSATFSDDIKALAEK
LLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMIGQGNWQQVLV
FTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVC
VDEHKLLRDIEKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGGGR
GRGQNQGGAGRSQQPRRQDSGAAKAKPKPRTGEGKTAGDKARPPRRPRRI
TPAQ
>gid:63703  rnhA  RNase HI, degrades RNA of DNA-RNA hybrids
MLKQVEIFTDGSCLGNPGPGGYGAILRYRGHEKTFSEGYTLTTNNRMELM
AAIVALEALKEHCEVTLSTDSQYVRQGITQWIHNWKKRGWKTAEKKPVKN
VDLWKRLDAALGQHQIKWVWVKGHAGHPENERCDELARAAAMNPTQEDSG
YQAEA
>gid:63645  rnhB  RNAse HII
MIEFVYPHTHLVAGVDEVGRGPLVGAVVTAAVILDPARPIVGLNDSKKLS
EKRRLSLYDEIKEKALSWSLGRAEAHEIDELNILHATMLAMQRAVAGLHI
APEYVLIDGNRCPELPVPSMAVVKGDSRVAEISAASILAKVTRDAEMAAL
DIVFPQYGFAQHKGYPTAFHLEKLAQYGATAHHRRSFAPVKRALGLVS
>gid:66097  rnt  RNase T
MSDNAQLSGLCDRFRGFYPVVIDVETAGFNAKTDALLEIAAITLKMDEQG
WLMPDMTLHFHVEPFAGANLQPEALAFNGIDPSNPLRGAVSEYEALHAIF
KMVRKGIKDSGCSRAIMVAHNATFDHSFMMAAAERASLKRNPFHPFVTFD
TAALSGLALGQTVLSKACLAAGMEFDGEKAHSALYDTERTAVLFCEIVNR
WKRLGGWPLPLPTDK
>gid:67024  ruvA  Holliday junction helicase subunit A
MIGRLRGIILEKQPPIVLLETGGVGYEVHMPMTCFYELPEAGQEAIVFTH
FVVREDAQLLYGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVN
AVEREELGALVKLPGIGKKTAERLIVEMKDRFKGLHGDLFTPAVDLVLTS
PASPTSEDAEQEAVAALVALGYKPQEASRMVSKIARPDASSETLIRDALR
AAL
>gid:67022  ruvB  Holliday junction helicase, subunit B
MIEADRLISAGATIAEDVADRAIRPKLLAEYVGQPQVRSQMEIFIQAAKR
RGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAM
LTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKI
DLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQHIVGRSARHM
GLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDGAISAEIAAQA
LDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFLQRTPRGRMATVRAWNHFGITPPEMP
>gid:67030  ruvC  Holliday junction nuclease
MSIILGIDPGSRITGYGVIRQVGRQLTYLGSGCIRTKVDDLPSRLKLIYA
GVTEIITQFQPDYFAIEQVFMAKNADSALKLGQARGVAIVAAVNQELPVF
EYAARQVKQTVVGIGSAEKSQVQHMVRTLLKLPANPQADAADALAIAITH
CHVSQNAMQMSESRLNLARGRLR
>gid:67366  sbcB  exonuclease I
MTVKNDSIQSTFLFHDYETFGTHPALDRPAQFAALRTDNDFNVIGEPEVF
YCKPADDYLPQPGAVLITGITPQEAREKGENEAAFARRIHALFTVPKTCV
VGYNNVRFDDEVTRNIFYRNFYDPYAWSWQHDNSRWDLLDVMRACYALRP
EGINWPENDDGLPSFRLEHLTRANGIEHSNAHDAMADVYATIAMAQLVKT
RQPRLFDYLYSHRSKHKLAALIDVPQMKPLVHVSGMFGAWRGNTSWVAPL
AWHPENRNAVIMVDLAGDISPLLELDSDTLRERLYTAKADLGDHAAVPVK
LVHINKCPVLAQANTLRPEDADRLGINRQHCLDNLKVLRENPQVRDKVVA
IFAEAEPFAASDNVDAQLYDGFFSDADRAAMKIVLETEPRNLPALDITFV
DKRIEKLLFNYRARNFPGTLDDAEQQRWLEHRRQVLTPEFLQQYANELQM
LSQQYAEDKTKLGLLKSLWQYATEIV
>gid:63969  sbcC  ATP-dependent dsDNA exonuclease
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAI
CLALYHETPRLNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNR
ARNQPDGNLQAPRVELARCSDGKIFADKVKDKLEMIATLTGLDYGRFTRS
MLLSQGQFAAFLNAKAKERAELLEELTGTEIYGQISAQVFEKHKSARLEL
EKLQAQASGVALLADEQLQQLEASLQALTDEEKRLLADQQGQQQHLHWLT
RKNELHTELHARQQALYAAQEAREKAQPQLAALTLAQPARQLRPHWERIQ
EQTRAVERVRQHSDEVNARLQSAYRLRQRIRACAHRQFTQLNATGQRLKT
WLAEHDGIRVWRSELAGWRALLTQQSHDRAQLSQWQQQLLSDTRQRDALP
PLTLDLTPQALAEARALHTRQRPLRHRLAALQGQILPKQKRQAQLQAAIA
RHHQEQAQYTQRLADKRLSYKTKAQELADVRTICEQEARIKDLESQRAHL
QSGQPCPLCGSTTHPAIAAYQALELSANQTRRDALEKEVKTLAEEGAALR
GQLDALTQQLQRDESEAQSLLQEEQALTEEWQTLCATLGVQLQPQEDLAG
WLTAAEEHEQQLDQLSQRHALQTQIAAHTEQVARFTAQIAQRQASLTADL
AQYTLSLPAPEDEASWLNERADEAKIWQQRQTEFADLQMQIDRLAPLLET
LPQTDTADSDDDVPLDNWRQAHDECVSLQSQLQTLQEQTTQEQQRAAEAI
AHFDAALKNSPFDSQATFLAALLDEETVTRLEKQQQTLESQLQQAKALSA
QSAQALADHQQQPPAGLDPTCTAEQLAQRLTQLAQQLRENTTRQGEIRQQ
IKQDADNRQRQRALMTEMKQASQQVEDWGYLNALIGSKEGDKFRKFAQGL
TLDNLVWLANHQLTRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLS
GGESFLVSLALALALSDLVSHKTRIDSLFLDEGFGTLDSETLDAALDALD
ALNASGKTIGVISHVEAMKERIPVQIKVKKINGLGYSKLDKAFAVE
>gid:63970  sbcD  ATP-dependent dsDNA exonuclease
MRILHTSDWHLGQNFYSKSRAAEHQAFLDWLLETAQAHQVDAIIVAGDIF
DTGSPPSYARELYNRFVVNLQQTGCHLVVLAGNHDSVATLNESRDILAFL
NTTVIASAGYAPRLLHRRDGSPGAVLCPIPFLRPRDIITSQAGLSGSEKQ
QQLLHAIADYYQQQYQEACQLRGERKLPVIATGHLTTVGASKSDAVRDIY
IGTLDAFPAQHFPPADYIALGHIHRAQCVGGTEHIRYCGSPIALSFDECG
KSKCVHLVTFEQGKWQSTESLAVPVTQPLAVLKGDLASITEQLEQWRGVE
QSPPVWLDIEITTDDYLHDIQRRIQTLTESLPVEVLLVRRSREQRERSLA
NERRETLSELSVEEVFARRLALEALDPPQRERLNQLFSSTLYALNEEHEA
>gid:67353  sbmC  DNA gyrase inhibitor
MDYEIRQEQKRKIAGFHMVGPWEHTVKQGFEQLMTWVDRQRIVPVEWIAV
YYDNPDVVPAEKLRCDTVVSVAENFILPDNSEGVIVTAIEGGEYATAVAR
VEDRDFAKPWERFFDVLEQDSAYQIASAPCFETYLNNGMEDGYWDIEMYI
PVQRK
>gid:64574  seqA  negative modulator of initiation of replication
MKTIEVDDELYSYIASHTKHIGESASDILRRMLKFSATTQPTASAVKGTP
AAQPVAEAKPVNPVKDKVRAMRELLLSDEYAEQKKAVNRFMLILTTLYSL
DHHAFAEATESLHGRTRVYFAADEQTLLKNGNQTKPKHVPGTPYWVITNT
NTGRKCSMIEHIMQSMQFPAELIEKVCGTI
>gid:70107  smf  putative protein involved in DNA uptake
MARTEIWLRLMYVGDLYGEAMLNMANSLIRQPQINRTHLQEAGLTARQAE
RFLQLPAGVLDETLRWLELPQHHFLCADSEIYPPQLRAIDDYPGAIFIDG
DPACLHTCQLAVVGSRSHSWYGERWGRLLCESLAKSGLTITSGLARGIDG
VAHNAAVSMGGKSVAVLGNGLAKIYPRRHAMLAENLIATGGAVVSEFPLS
TPPLPQHFPRRNRIISGLSKGVLVIEAALRSGSLVTARCALEQGRDVFAL
PGPIGSPGSEGTHWLIKQGATLVTTPEDILENLQYGLHWLPTTAENSLYS
LNQDEAALPFPELLANVGDEVTPVDVVAERAGQPVPAVVAQLLELELAGW
IAAVPGGYVRLRRASHVRRTNVFV
>gid:68581  srmB  ATP-dependent RNA helicase
MTVTTFSELELDESLLDALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPT
GTGKTAAYLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELA
KHTHLDIATITGGVAYMNHAEVFSENQDIVVATTGRLLQYIKEENFDCRA
VETLILDEADRMLDMGFAQDIEHIAGETRWRKQTMLFSATLEGDAIKDFA
ERLLEDPVEVSANPSTRERKKIHQWYYRADNFEHKVALLKHLLKQDDATR
SIVFVRKRERVHELAETLRLAGINNCYLEGEMAQIKRNEGIKRLTDGRVN
VLVATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGTAIS
LVEAHDHLLLLKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLA
KRAEKKKEKEKEKPRVKKRHRDTKNIGKRRKPSGTKMQEQSSEE
>gid:71945  ssb  ssDNA-binding protein
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANLTLATSESWRDKQTGEMK
EQTEWHRVVMFGKLAEVAGEYLRKGSQVYIEGQLRTRKWTDQSGQERYTT
EINVPQIGGVMQMLGGRQGGGAPAGGQQQGGWGQPQQPQQPQGGNQFSGG
AQSRPQQSAPAPSNEPPMDFDDDIPF
>gid:70621  tag  constitutive 3-methyl-adenine DNA glycosylase I
MQRCDWVSQDPLYIAYHDNEWGVPETDSRKLFEMICLEGQQAGLSWITVL
KKRENYRACFHQFDPVRIAAMQEEDVEHLLQNTGIIRHRGKIQAIISNAR
AWLAMEQNGESFADFVWSFVDGQPQITQAASLDEIPTSTPASDALAKALK
KRGFKFVGTTICYSFMQACGLVNDHITGCFCHPGEKHDSQIPE
>gid:65091  tnpA_1  IS200 transposase
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNV
RILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>gid:67156  tnpA_2  transposase for IS200
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNV
RILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>gid:68232  tnpA_3  transposase for IS200
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNV
RILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>gid:69344  tnpA_4  transposase for IS200
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNV
RILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>gid:70271  tnpA_5  transposase for IS200
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNV
RILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>gid:72080  tnpA_6  transposase for IS200
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNV
RILEAECCADHIHMLLEIPPKMSVSSFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>gid:66630  topA  DNA topoisomerase type I, omega protein
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAAKKSADS
TSTKTAKKPKKDERGALVNRMGVDPWHNWDAHYEVLPGKEKVVSELKQLA
EKADHIYLATDLDREGEAIAWHLREVIGGDDARYSRVVFNEITKNAIRQA
FEQPGELNINRVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAGRVQSVA
VRLVVEREREIKAFVPEEFWEIDANTTTPSGEALPLQVTHQNDKPFRPVN
REQTLAAVSLLEKARYSVLEREDKPTSSKPGAPFITSTLQQAASTRLGFG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVNMVRGYIGDNFGKKYLPD
NPNQYASKENSQEAHEAIRPSDVAVMAESLKDMEADAQKLYQLIWRQFVA
CQMTPAQYDSTTLTVGAGEFRLKARGRILRFDGWTKVMPALRKGDEDRTL
PAVNKGDALTLLELTPAQHFTKPPARFSEASLVKELEKRGIGRPSTYASI
ISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTAQMEDSL
DQVANHQAEWKAVLDNFFSDFTQQLDKAEKDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALSPKERCKTTINLVPENEVLNVLEGDD
AETNALRAKRRCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFR
IKGYDGPIVECEKCGSEMHLKMGRFGKYMACTNDECKNTRKILRNGEVAP
PKEDPVPLPELPCEKSDAYFVLRDGAAGIFLAANTFPKSRETRAPLVEEL
YRFRDRLPEKLRYLADAPQQDPEGNKTVVRFSRKTKQQYVAAEKDGKATG
WSAFFVDGKWVEGKK
>gid:65829  topB  DNA topoisomerase III
MRLFIAEKPSLGRAIADVLPKPHRKGDGFIECGNGQVVTWCIGHLLEQAQ
PDAYDSRYARWNLADLPIVPEKWQLQPRPSVTKQLNVIKRFLHQAGEIIH
AGDPDREGQLLVDEVLDYLQLPAEKRQQVRRCLINDLNPQAVERAIDRLR
ANSDFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQGVLSVGRVQT
PVLGLVVRRDEEIENFVAKDFFEVKAHIVTPADERFTAIWQPSEACEPYQ
DEEGRLLHRPLAEHVVNRINGQPALVTSYNDKRESESAPLPFSLSTLQIE
AAKRFGLSAQNVLDICQKLYETHKLITYPRSDCRYLPEEHFAGRQAVMNA
ISVHAPDLLPQPVVNPDTRNRCWDDKKVDAHHAIIPTARSSSVHLTENEA
KVYTLIARQYLMQFCPDAVFRKCVIELEIAKGKFVAKARFLAEAGWRTLL
GSKERDEENDGTPLPVVAKGDELLCEKGEVVERQTQPPRHFTDATLLSAM
TGIARFVQDKDLKKILRATDGLGTEATRAGIIELLFKRSFLTKKGRYIHS
TDAGKALIHSLPEMAARPDMTAHWESVLTQISEKQCRYQDFMQPLVGTLY
QLIEQAKRTPVKRFRGIVAPGGGDKKKSAPRKRAGKKSPPAAETGRQTE
>gid:67235  umuC  error-prone repair protein
MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIA
PGEPYFKQKERFRRSGVVCFSSNYELYADMSNRVMTTLEEMVPRVEIYSI
DEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLAN
HAAKKWQRQTDGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGI
KTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEFAPAKQEIVCS
RSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALN
EPYYGNSAAVTLLTPTQDSRDIINAAVKCLDKIWRDGHRYQKAGVMLGDF
FSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQW
AMKREMLSPRYTTRYSDLLRVK
>gid:68589  ung  uracil-DNA-glycosylase
MATELTWHDVLADEKQQPYFINTLHTVAGERQSGITVYPPQKDVFNAFRF
TELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAPPPSLVNMYKELEASI
PGFVRPAHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVIS
LINQHREGVVFLLWGSHAQKKGAIIDPQRHHILKAPHPSPLSAHRGFFGC
NHFALTNQWLEQHGEKTIDWTPVLPAESE
>gid:71935  uvrA  DNA excision repair enzyme
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGT
ITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVLSQPEGKRLML
LAPIIKERKGEHTKTLENLASQGYIRARIDGEVCDLSDPPKLELQKKHTI
EVVIDRFKVRNDLSQRLAESFETALELSGGTAVVADMDDEKAEELLFSAN
FACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSANVHKVVLYG
SGKENIEFKYMNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKF
ISNRPCASCEGTRLNREARHVFVENTPLPAISDMSIGHAMDFFTNLKLSG
QRAKIAEKVLKEIGDRLKFLVNVGLNYLTLSRSAETLSGGEAQRIRLASQ
IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNTVIVVEHDEDA
IRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLI
NDTLFPIAQRQLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSN
PATYTGVFTPVRELFAGVPESRSRGYTPGRFSFNVRGGRCEACQGDGVIK
VEMHFLPDIYVPCDQCKGKRYNRETLEIKYKGKTIHEVLDMTIEEAREFF
DAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKLARELSKRGTG
QTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVAGTPETVAECEASHTARFLKPMLK
>gid:64797  uvrB  UvrB with UvrAC is a DNA excision repair enzyme
MSKPFKLNSAFKPSGDQPDAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIA
NVIADLQRPTMVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEA
YVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGD
PDLYLKMMLHLTVGMLIDQRAILRRLAELQYTRNDQAFQRGTFRVRGEVI
DIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTVPRYTIYPKTHYV
TPRERILQAMEEIKDELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGM
YRGDRARKETLVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYE
LEKSGDEVVDQVVRPTGLLDPIIEVRPVATQVDDLLSEIRQRAAINERVL
VTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVERMEIIRDLRLGEFDVL
VGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNVNGKA
ILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVVDILALG
QNIAKTKAKGKGKGRSTAKAGIVELDMTPKALQQKIHELEGQMMQHAQNL
EFEEAAQIRDQLHQLRELFIAAS
>gid:67133  uvrC  UvrC
MSEIFDAKAFLKTVTSQPGVYRMYDAGGTVIYVGKAKDLKKRLSSYFRSN
LASRKTEALVAQIQHIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDK
SYPFIFLSGDTHPRLAMHRGAKHAKGEYFGPFPNGYAVRETLALLQKIFP
IRQCENSVYRNRSRPCLQYQIGRCLGPCVAGLVSEEEYAQQVEYVRLFLS
GKDDQVLTQLIARMEKASQDLAFEEAARIRDQIQAVRRVTEKQFVSNAGD
DLDVIGVAFDAGMACVHVLFIRQGKVLGSRSYFPKVPGGTELGEVVETFV
GQFYLQGSQMRTLPGEILLDFNLSDKTLLADSLSELAGRRIHVQTKPRGD
RARYLKLARTNAATALITKLSQQSTITQRLSALAAVLKLPAIKRMECFDI
SHTMGEQTVASCVVFDANGPLRAEYRRYNIAGITPGDDYAAMNQVLRRRY
GKAIEESKIPDVILIDGGKGQLAQAKAVFAELDVPWDKHRPLLLGVAKGA
DRKAGLETLFFEPEGEGFSLPPDSPALHVIQHIRDESHDHAIGGHRKKRA
KVKNTSTLETIEGVGPKRRQMLLKYMGGLQGLRNASVEEIAKVPGISQGL
AEKIFWSLKH
>gid:71272  uvrD  DNA-dependent ATPase I and helicase II
MDVSYLLDSLNDKQREAVAAPRSNMLVLAGAGSGKTRVLVHRIAWLLSVE
NNSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRA
HHMDANLPQDFQILDSEDQMRLLKRLIKAMNLDEKQWPPRQAMWYINSQK
DEGLRPHHIQSYGNPVEQTWQKVYQAYQEACDRAGLVDFAELLLRAHELW
LNKPHILQHYRERFTNILVDEFQDTNNIQYAWVRLLAGDTGKVMIVGDDD
QSIYGWRGAQVENIQRFLNDFPGAQTIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGVDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALAQC
AILYRSNAQSRVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIAN
RNDDAAFERVVNTPTRGIGDRTLDVVRQTSRDRQLTLWQVCRELLQEKAL
AGRAASALQRFMELIDALAQETADMPLHVQTDRVIKDSGLRTMYEQEKGE
KGQTRIENLEELVTATRQFSYNDEDEDLMPLQAFLSHAALEAGEGQADTW
QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATV
SRPVSHQRMGTPLAENDTGYKLGQRVRHAKFGEGTIVNLEGSGEHSRLQV
AFQGQGIKWLVAAYAKLETV
>gid:67223  vsr  DNA mismatch endonuclease
MADVHDKATRSKNMRAIATRDTAIEKRLAGLLSAQGITFHTQDATLPGKP
DFVVNDYDCVIFTHGCFWHHHHCYLFKVPATRTAFWLEKIGKNVERDERD
IQRLQALGWRVLIVWECALRGRAKLSDAALAERLEEWICGGGASAQIDTQ
GIHLLA
>gid:67441  wcaH  GDP-mannose mannosyl hydrolase
MRISNGSGGDNVFTSGRFRRRGAATPLISLDFIVENGQGEILLGQRLNRP
AQGYWFVPGGRVCKDETLEAAFARLTQAELGVRLPLAAGTFYGVWQHFYD
DNFSGEDFSTHYIVLGFRLRVAESDLRLPDAQHGSYRWLTPEQLLASDNV
HENSRAYFSPDAPAVGL
>gid:71265  xerC  putative site-specific integrase/recombinase
MTDVALSQDVSRFLRYLGVERQLSPITLLNYQRQLDAIIALAGETGLKSW
QQCDAAIVRSFAVRSRRKGLGPASLALRLSALRSFFDWLVSQGELKANPA
KGVSAPKAPRHLPKNIDVDDVNRLLDIDLNDPLAVRDRAMLEVMYGAGLR
LSELVGLDIKHLDLDTGEVWVMGKGSKERRLPIGRNAVTWIEHWLDLRGL
FASDEEALFLSKLGKRISARNVQKRFAEWGIKQGLNSHVHPHKLRHSFAT
HMLESSGDLRGVQELLGHANLSTTQIYTHLDFQHLASVYDAAHPRAKRGK
>gid:69365  xerD  site-specific recombinase
MEQDLARIEQFLDALWLERNLAENTLSAYRRDLSMVVAWLHHRGKTLATA
QADDLQTLLAERVEGGYKATSSARLLSAMRRFFQHLYREKYREDDPSAQL
ASPKLPQRLPKDLSEAQVERLLQAPLIDQPLELRDKAMLEVLYATGLRVS
ELVGLTMSDISLRQGVVRVIGKGNKERLVPLGEEAVYWLETYLEHGRPWL
LNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEKLSPHVLRHAF
ATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
>gid:68318  xseA  exonuclease VII, large subunit
MLSSQTSSIFTVSRLNQTVRLLLEQEMGQVWISGEISNFTQPASGHWYFT
LKDDTAQVRCAMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIAE
SMQPAGEGLLQQKYEQLKAKLQAEGLFDQQHKQPLPSPAHCVGVITSKTG
AALHDILHVLKRRDPSLPVIIYPTAVQGDDAPGQIVRAIELANARGECDV
LIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHETDVTIADFVAD
LRAPTPSAAAEIVSRNQQELLRQIQSAQQRLGMAMDYYLANRSRRFTQIF
HRLQQQHPQLRLARQQTALERLRQRMGFALEARIKQANQRQQCVSQRLSQ
QNPQPRIHRAQSRIQQLEYRLTENIRSRLSEQRERFGNAVTHLEAVSPLA
TLARGYTVSTTTDGKVLKKIKQVKAGDIMTTRLEDGWLESEVKSVTPGT
>gid:64032  xseB  exonuclease VII, small subunit
MPKKNEAPASFETALSELEHIVTRLESGDLPLEDALNEFERGVQLARQGQ
AKLQQAEQRVQILLSDNEEASPEPFIADNE
>gid:65835  xthA  exonuclease III
MKFVSFNINGLRARPHQLEAIVEKHQPDVIGLQETKVHDEMFPLEEVAKL
GYNVFYHGQKGHYGVALLTKATPISVRRGFPDDGEEAQRRIIMAEIPSPL
GNITVINGYFPQGESRDHPLKFPAKAQFYQNLQNYLETELKCDNPVLIMG
DMNISPTDLDIGIGEENRKRWLRTGKCSFLPEEREWMSRLLKWGLVDTFR
QANPQTMDKFSWFDYRSKGFVDNRGLRIDLLLASAPLAERCAETGIDYDI
RSMEKPSDHAPVWATFRV
>gid:64094  ybaV  putative DNA uptake protein and related DNA-binding proteins
MKHGIKALLITLSLTCAGMAHSALAATPVAKNAAVETKADTPSSSSAKAA
LPAKASDDEGTRVSINTASAEDLARVMNGVGLKKAQAIVSYREEYGPFKT
VDDLKQVPGMGSALVERNLAVLTL
>gid:64119  ybaZ  putative methyltransferase
MLVSCASGLSSPLIPDYPEALTQDSIMDIQDTFPQRVWQIVASIPEGFVT
TYGDVARLAGSPRAARQVGGVLKRLPEGSTLPWHRVVNRHGAISLTGPDL
QRQRQALLAEGVVVSGSGQIDLQRYRWVY
>gid:65076  ybjD  homology with RecF protein
MILERVEIVGFRGINRLSLMLEQNNVLIGENAWGKSSLLDALTLLLSPEL
DLYHFVREDFWFPPGDIKGREHHLHIILTFRETQPGRHRVRRYRALEACW
SLCEDDFHRIFYRLEGECGADGSVMTLRSFLNSDGQPLLVENINDQVRHL
VRLMPVLRLRDARFMRRIRNGTVPNVPDVEVTARQLDFLARELATRPQNL
TDGQIRQGLSAMVQLLEHYFSEQGAGQARHRLMRRRSQNEQRTWRYLDII
NRMIDKPGSRSHRVILLGLFSTLLQAKGTLRLHKDARPLLLVEDPETRLH
PIMLSVAWQLLNLLPLQRIATTNSGELLSLTPVEHVVRLVRESSRVAAWR
LGPGGLSAEDGRRIAFHIRFNRASSLFARCWLLVEGETETWVINELARQC
GHHFDAEGIKVIEFAQSGLKPLVKFARRMGIEWHVLVDGDEAGKKYAATV
RSLLNNDREEEREHLTALPALDMEHFMYRQGFADVFHRVAQLPPNVPMNT
RKIITKAIHRSSKPDLAIEVAMEAGRRGIDAVPPLFRKMFSRVVWLARGR
AD
>gid:65124  ycaJ  putative polynucleotide enzyme
MSNLSLDFSDNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL
HSMILWGPPGTGKTTLAEVIARYASADVERISAVTSGVKEIREAIERARQ
NRNAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELN
SALLSRARVYLLKSLTTDDIEQVLDQAMQDKTRGYGDQDIVLPDETRRAI
AELVNGDARRALNTLEMMADMAEADDSGKRVLLPALLTEIAGERSARFDN
KGDRFYDLISALHKSVRGSAPDAALYWYARIITAGGDPLYVARRCLAIAS
EDVGNADPRAMQVAIAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY
TAFKAALADARERPDYDVPVHLRNAPTKLMKEMGYGQEYRYAHDEPNAYA
AGEVYFPPEIAQTRYYHPTNRGLEGKIGEKLAWLAEQDQNSPTKRYR
>gid:65638  ycfH  putative metal-dependent hydrolase
MFLVDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVATTLPGYRHM
RKLVGKRDNVVFSCGVHPLNQDEAYDVEELRLLAAEDDVVAMGETGLDYF
YTPETKIRQQASFIHHIQIGRELHKPVIVHTRDARADTLAILREEKVTDC
GGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQLRDAARYVPLDRL
LVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLKGVAVEELAQITTDNF
ARLFHIDASRLSSIR
>gid:66881  yeaB  putative NTP pyrophosphohydrolase
MDTSRLTLDHFLSRFQLLRPQMTHETLNQRQAAVLIPVVRRPQPGLLLTQ
RAIHLRKHAGQVAFPGGAVDSTDASLIAAALREAQEEVAIPPQAVEVIGV
LPPVDSVTGFQVTPVVGIIPPNLPWRASEDEVSAVFEMPLAQALQLGRYH
PLDVYRRGNSHRVWLSWYEHYFVWGMTANILRELALQIGVKP
>gid:67685  yejH  putative ATP-dependent helicase
MIFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARG
RVLVLAHVKELVAQNHAKYCALGLEADIFAAGLKRKESQGKVVFGSVQSV
ARNLDAFQEEFSLLIVDECHRIGDDEDSQYQQILTHLSKVNPHLRLLGLT
ATPFRLGKGWIYQFHYHGMVRGNDNALFRDCIYELPLRYMIKHGYLTPPE
RLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPHIISQIMEFAQ
TRKGVMIFAATVEHAKEIVGLLPADDAALITGDTPGPERDALIDNFKAQR
FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTD
CLILDYAGNPHDLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTAD
GTLIEHFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRE
CDAILVDPDDMLKAALRLKDALVLRCSGMTMQHGQDEKGEWLKITYYDED
GADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITAADIVAQQALL
RHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG
>gid:67862  yfaO  putative NTP pyrophosphohydrolases including oxidative damage repair enzymes
MRQRTIVCPLIQNDGCYLLCKMADNRGVFPGQWALSGGGVEPGERIEEAL
RREIREELGEQLILSDITPWTFRDDIRIKTYADGRQEEIYMIYLIFDCVS
ANRDICINDEFQDYAWVKPEELALYDLNVATRHTLALKGLL
>gid:68244  yffH  putative pyrophosphohydrolase
MSQTITLIKDKILSDNYFTLRNITYDLTRRNGEVIRHKREVYDRGNGATI
LLYNSTKKTVVLVRQFRVATWVNGNQDGMLIETCAGLLDNDEPEVCIRKE
AIEETGYDVGEVRKIFELYMSPGGVTELIHFFIAEYHDSERASIGGGVED
EEIEVLELPFSRALEMVRSGEIRDGKTVLLLNYLQTSHLMD
>gid:68285  yfgE  putative ATPase involved in DNA replication initiation
MSSWVEVSLNTPAQLSLPLYLPDDETFASFWPGDNASLLAALQNVLRQEH
SGYIYLWAREGAGRSHLLHAACAELSQRGDAVGYVPLDKRTWFVPEVLDG
MEHLSLVCIDNIECVAGDELWEMAIFDLYNRILESGKTRLLITGDRPPRQ
LNLGLPDLASRLDWGQIYKLQPLSDEDKLQALQLRARLRGFELPEDVGRF
LLKRLDREMRTLFMTLDQLDHASITAQRKLTIPFVKEILKL
>gid:69282  ygdP  putative invasion protein
MIDDDGYRPNVGIVICNRQGQVMWARRFGQHSWQFPQGGINPGESAEQAM
YRELFEEVGLSRKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQKWF
LLQLMSADAEINMQTSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKE
FASVVMALQDNPPKLQSAPAYRRKRG
>gid:69843  yhbQ  putative cytoplasmic protein
MLMATMTPWYLYLIRTADNALYTGITTDVARRYRQHQTGKGAKALRGKGE
LTLAFAAQVGDRSLALRIEYRIKQLTKRQKERLVTEREAFEALLSSLQTP
VLKND
>gid:70079  yhdJ  putative methyltransferase
MKAECEPQYFGDESKKIIHGDALTELKKLPSESIDLIFADPPYNIGKDFD
GMVESWDEASFLAWLYECIDECHRVLKKHGTMYIMNSTENMPYIDLKCRT
LFTIKSRIVWSYDSSGVQAKKYFGSMYEPILMMVKNPKSYTFNRDAILVE
TTTGAKRALIDYRKNPPQPYNQKKVPGNVWSFPRVRYLMDEYENHPTQKP
SALLKRIILASSNPSDTVLDPFAGSFTTGAVAAASGRKFIGIELNNEYVK
MGLRRLSVTSHYSENELAKVKKRKTQNLSKKQRNVGINALSSEK
>gid:70481  yhhF  putative methyltransferase
MKKPTHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPV
MVDAHCLDCFAGSGALGLEALSRYAAQATLLEMDRAVSQQLQKNLATLKA
NNARVVNTNTLTFLSQPGTPHHVVFVDPPFRKGLLEETLQLLETQGWLAD
DALIYVESEVENGLPPVPANWALYREKVAGQVAYRLYQRDAQGENDVD
>gid:70484  yhhM  putative inner membrane protein
MSKPPLFFIIIIALIVVAASFRFVQQRREKAANEAAPLQQKQVVVSNKRE
KPVNDRRSRQQEVIPAGTSMRYEVSFKPLNGGLEKTFRLQAQQYHALTVG
DQGTLSYKGTRFVGFVSRTPDNE
>gid:70730  yibL  putative cytoplasmic protein
MKEVEKNEIKRLSDRLDAIRHQQAGLSLVESADKYAELEKEKETLEAEII
RLREVHSQKLSKEAQKLMNLPFRRAITKKEQADMGKLKKSVRGLIVVHPM
TALGREMGLKEMTGFAKSEF
>gid:70825  yicF  putative DNA ligase
MRLWKSMAWGILLWHSQSGALCPAWPPARAAEEIARLQQQLADWNDIYWK
QGVSAVDDSVYDQLSARLVQWQRCVGQDVSSTPVSPPLNGTTMHPVAHTG
VRKLVDRQAVEQWMRGRSELWVQPKVDGVAVTLVYQNGKLTRAISRGNGL
QGEDWTPKIRLIPSIPQTTQGALANAVLQGEIFLQREGHIQQRMGGMNAR
SKVAGMLMRQDNASALNSLGIFIWAWPDGPANMPERLSQLAKAGFSLTNK
YTLAVKDASEVERARQSWLTSALPFVTDGVVIRMAKEPASQHWRPGQGDW
LAAWKYPPVAQVAQVSAIQFSVGKSGKITVVASLVPVILDDKRVQRVNIG
SVKRWEAWDIAPGDQILVSLAGQGIPRLDEVVWRSRERSKPVPPDSHFNS
LTCFYASATCQEQFISRLIWLGSRSALGLDGMGEASWRALHQTHRFEHIF
SWLTLTSAQIANTPGFAKGKSEQIWRQFNLARRQPFTRWIMAMDIPLTQA
ALQASGDRSWEQLLMRTEQHWRQLPATGERRAGRVIDWRNNLQIKALSRW
LAAQHIPGFGS
>gid:71323  yigW  putative hydrolase of PHP superfamily
MFDIGVNLTSSQFAKDRDDVVARAFAAGVKGMLLTGTNIHESQQALKLAR
RYPHCWSTAGVHPHDSSQWSPASEDAIIALANQPEVVAIGECGLDFNRNF
STPQEQERAFQAQLQIAAELQIPIFMHCRDAHERFLVLLDPWLDSLPGAI
LHCFTGSRQQMQACVDRGLYIGITGWVCDERRGLELRELLPFIPAEKLLI
ETDAPYLLPRDLTPKPTSRRNEPAYLPHILERIALWRGEDPQWLAAMTDA
NARTLFEVVF
>gid:71739  yjaD  putative NTP pyrophosphohydrolases containing a Zn-finger
MDRIIEKLESGWWIVSHEQKLWLPYGELPHGLAANFDLVGQRALRIGEWQ
GEPVWLVLQHRRHDMGSVRQVIDQEAGLFQLAGRGVQLAEFYRSHKFCGY
CGHPMHPSKTEWAMLCSHCRERYYPQIAPCIIVAIRREDSILLAQHVRHR
NGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWPFPQSL
MTAFMAEYDSGEIVIDPKELLEANWYRYDDLPLLPPPGTVARRLIEDTVA
MCRAEYD
>gid:72574  yjjV  putative hydrolase
MSWRFIDTHCHFDFPPFTGDERASIQRACEAGVEKIIVPATEAAHFPRVL
ALAARFPSLYAALGLHPIVIERHADDDSDKLQQALAQQQNVVAVGEIGLD
LYRDDPQFARQERFLDAQLQLAKRYDLPVILHSRRTHDKLAMHLKRQDLP
RTGVVHGFAGSLQQAERFVRLGYKIGVGGTITYPRASKTRDVMARLPLDA
LLLETDAPDMPLKGFQGQPNRPEQAARVFDALCELRPEPAEVIADTLYRN
TITLFRL
>gid:65705  ymfB  putative MutT-like protein
MFKPHVTVACIVHAEDKFLVVEETINGKSLWNQPAGHLEADETLAQAAAR
ELWEETGITAQPQYFIRMHQWIAPDKTPFLRFLFAIKLDHICATDPHDND
IDCCRWVSADEILNAPNLRSPLVAESVRSYQTGQRYPLSIVGEFNWPFTE
GVK
>gid:66872  yoaA  putative DNA helicase
MTDDFAADGQLAKAITGFKPREPQRQMAVAVTQAIENAQPLVVEAGTGTG
KTYAYLAPALRAGKKVIISTGSKALQDQLYSRDLPTVAKALAFTGKTALL
KGRSNYLCLERLEQQALAGGDLPVQTLSDVILLRSWSNQTRDGDISTCVS
VAEDSQAWPLVTSTNDNCLGSDCPLYKECFVVKARKKAMDADVVIVNHHL
FLADMVVKESGFGELIPQAEVMIFDEAHQLPDIASQYFGQSLSSRQLLDL
AKDITIAYRTELKDTQQLQKCADRLAQSAQDFRLQLGEPGYRGNLRELLA
DSRIQRAFLLLDDTLELCYDVAKLSLGRSALLDAAFERATLYRSRLKRLK
EINQPGYSYWYECTSRHFTLALTPLTVADKFKEVMEQKPGSWIFTSATLS
VNDDLHHFTARLGIEQAESMLLPSPFDYTRQALLCVPRNLPQTNQPGAAR
QLAAMLRPIIEANNGRCFMLCTSHAMMRDLAEQFRATMTLPVLLQGETSK
GQLLQQFVSAGNALLVATSSFWEGVDVRGDTLSLVIIDKLPFTSPDDPLL
KARMEDCRLRGGDPFDEVQLPDAVITLKQGVGRLIRDADDRGVLVICDNR
LVMRPYGATFLASLPPAPRTRDIARAVRFLAIPSAE
>gid:69480  yqgF  putative endonuclease involved in recombination
MSGTLLAFDFGTKSIGVAIGQRITGTARPLPAIKAQDGTPDWTLIERLLK
EWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVTVTLHDERLST
VEARSGLFERGGYRALNKGKVDSASAVIILESYFEQGY
>gid:69662  yqiE  putative resistance protein
MRKSDNLPVTFTKSDVEIIARETRYRGFFSLDVYRFRHRLFNGEMSGEVK
REIFERGHAAVLLPFDPERDEVVLVEQIRIAAYDTSVTPWLLEMVAGMIE
EGETIEAVARREAMEEAGLTVGRTRPVISYLASPGGTSERSSILVGEVDA
TTAVGIHGLADENEDIRVHVVSREQAYQWVEEGKIDNAAAVIALQWLQLH
HQELKNEWKK
>gid:69831  yraN  putative endonuclease
MAQIPARGDCSRQLTRKQAGDAWEAAARRWLESKGLRFIAANVRERGGEI
DLIMRDGKTTVFVEVRYRRSGLYGGAAASVTRSKQHKLLHTARLWLARQN
GSFDTVDCRFDVLAFTGNEIEWFRDAFNDHS
>gid:70104  yrdD  putative DNA topoisomerase
MAKSALFSVRKNEPCPQCGAELVIRSGKHGPFLGCSRYPECDYVRPLKSQ
ADGHIVKILEGQLCPECGAVLVLRQGRFGMFIGCSQYPQCEHTVVIDKPD
ETAIACPACQQGHLVQRRSRYGKIFHSCDRYPECQFVINFTPVAGECPEC
HYPLLIEKKTAQGVKRFCASKQCGKPVPVE
>gid:70298  yrfE  putative NTP pyrophosphohydrolase
MTTDYTAKILTMSKSLQKPTILKVETVAQSRLFNVESVDLEFSNGVRRVY
ERMRPSTREAVMIVPIVDEHLILIREYAVGTESYELGFSKGLIDPGETVF
EAANRELKEEVGFGAHNLTFLKKLSMAPSYFSSKMNIVVAEDLYPESLEG
DEPEPLPQVRWPLAHLMDLLEDPDFNEARNVSALFLVREWLKAQGRIA