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# Salmonella typhimurium LT2, SGSC1412

>gid:863085  PSLT036  putative transposase, IS200-like
MECEIIEMDGEQDHVHLLIAYPLKLGVSVMVNNLKSVSSRLLRQQNTHLR
MQSKTGLLWSRSYFACSAGGATIETLKAYVLRQNTPE
>gid:863091  PSLT042  putative integrase protein
MPIIAAIPDEERQLMRKEAQQTHDKNHARRLIAMLMLHQGMTVTDVARLL
CAARSSVGRWINWFTLHGVEGLKSLRPGRAPRWPVADILQLLPLLVQRSP
KDFGWLRSRWSTELLALVINRLFDVTLHRSTLHRYLRQADMVWRRAAPTL
KIKDPHYEEKRLVIDQALAQEQTAHPVFYQDEVDIDLNPKIGADWMPKGQ
QKRIATPGQNQKHYLAGALHSGTGRVHYVSGSSKSSDLFISLLETLRRTY
RRAKTITLVADNYIIHKSRKVERWLEENPKFRLLFLPMYSPWLNPIERLW
LSLHETITRNHQCRYMWQLLKQVAQFMNAASLFPGNQQGLAKVER
>gid:863098  PSLT049  putative DNA polymerase III epsilon subunit (3'-5' exonuclease)
MKPAPGAEPVRMYKSPYGGKYGVWRLADCVPMRAKRPQTEKQRLASTRLG
LQARMKSERGRFAMLAHTWLALGPVFLDTETTGLDAGAQALEIGLVNARG
ERIFETRLKPTVGIDPAAAAVQIVTEPYRFPVLSVRLA
>gid:863107  PSLT059  putative adenine-specific DNA methylase
MSRLILGNCVDIMSGFPERAVDFILTDPPYLVGFRDRSGRSIAGDRTDEW
LQPACNQMYRVLKKDALLVSFYGWNRVDRFMAAWKSAGFSVVGHLVFTKN
YSSKSAYVGYRHECAYVLAKGRPALPQNPLPDVLGWKYSGNRHHPTEKPV
TSLQPLIESFTHTNAIVLDPFAGSASTCVAALQAGRRYIGIELMEQYHKA
GIERLTAVQRAMQRPAANDVFYPEAA
>gid:863093  rlgA  putative integrase protein
MSSRRSAIPSDSLLQLRQRLDRLPPKSPERANQIAATAQLYGISVTTVYR
ALHLVLKPRTAHRSDHGQPRILPPSELEHYCELIAALKLRTTNKSGRHLS
TGRAIQLLEEHGVETVQGLIKSPKGLLRKQTVNRWLSRWRLDQPRLLREP
PAVRFQAENSNDCWQFDMSPSDLKHIERPDWVDPARGEPTLMLFSVVDDR
SGVAYQEYRCVYGEDAESALRFLFNAMAPKTRSDFPFQGRPKLLYLDNGP
VAKNHVFQNVMQSLKVDWLTHTPAGKDGTRTTARSKGKVERPFRTVKEAH
ETLYHFHKPETELQANEWLWNYLSRYNAQRHRSEKHSRLEDWLANIGQEG
VRDMCSWEQYCRFAREPESRKVGVDARITIDGTAWEVEPDMAGETVILLW
GLFDEEMYVEFTGETWGPYYPVSGPVPLHRYRTFRRGKAAERADRIHALA
RQLNIPISALSGSDLRVVSDDTQQRIDALPHQPFDTRKFEYHFPTVIAAK
LAIADDLAIPLARMSDEDRAFIDSILTETLNRSEVLARIRDYFRSRQSGE
DHAG
>gid:863094  rlgA  putative resolvase
MALYGYARVSTSDQDLTLQTQILRAAGCEIIRAEKASGSGRTGRSELQLL
LEFLRPGDTLMVTRVDRLARSIKDLQDIVYALNQQGVTLRATEQPVDTRS
AAGKAFLDMLGVFAEFETNLRRERQMEGIAAAKARGVYRGRKPSIDPAVV
YRLYTIEKMGATAIARQLGIGRASVYRALENYEQPA
>gid:863080  rsdB  resolvase
MSQPPLPAVCTQAASALLPVAIDYPAALALRQMAMQHDDYPKYLLAPEVS
ALLHYVPDLHRRMLLATLWNTGARINEALALTRGDFSLAPPYPFVQLATL
KQRAEKAARTAGRMPSGSQPHRLVPLSDNQYVSELQMMVATLKIPLERRN
RRTGRTEKARLWEITDRTVRTWIGEAVEAAAADDVTFSVPVTPHTFRHSY
AMHMLYAGIPLKVLQALMGHKSVSSTEVYTKVFALDVAARHRVQFQMPGA
DAVAMLKGGS
>gid:863103  samB  mutagenesis by UV and mutagens; related to umuDC operon
MFALADVNSFYASCEKVFRPDLRDRSVVVLSNNDGCVIARSAEAKKLGIK
MGVPWFQLRSAKFPEPVIAFSSNYALYASMSNRVMVHLEELAPRVEQYSI
DEMFLDIRGIDSCIDFEDFGRQLREHVRSGTGLTIGVGMGPTKTLAKSAQ
WASKEWSQFGGVLALTLHNQKRTEKLLSLQPVEEIWGVGRRISKKLNTMG
ITTALQLARANPTFIRKNFNVVLERTVRELNGESCISLEEAPPPKQQIVC
SRSFGERVTTYEAMRQAVCQHAERAAEKLRGERQFCRHIAVFVKTSPFAV
TEPYYGNLASEKLLIPTQDTRDIIAAAVRALDRIWVDGHRYAKAGCMLND
FTPTGVSQLNLFDEVQPRERSEQLMQVLDGINHPGKGKIWFAGRGIAPEW
QMKRELLSPAYTTRWADIPAAKLT
>gid:863084  spvD  putative transposase
MLRATKVCIYPTPEQAEHLNAQFGAVRFVYSKSLHIKKHAYQRHGVSLTP
RKDIKPLLAVAKKFRKFRKYAWLKEYDSIALQQAVINLDVAFSNCFNPKL
KARFPMFKRKHGKLLG
>gid:863113  ssbB  single-strand binding protein
MAARGVNKVILVGHIGQDPEVRYMPNGGAVANLTLATSETWRVRQDGEMR
EHTEWHRVVVFGKLAEIASEYLRKGAQVYIEGQLRTRKWTDQSGQDKYTT
EVIVNVGGTMQMLGRHNSQPQQEPQTPPTAAKGEGKAVKGAGNAAKGKNA
AAPQQPPAQPDPAYDFDDDIPF
>gid:863127  traB  conjugative transfer: assembly
MASINTVVKRKQYIWLGIVAVGAAAAIGGGLYLSDVDMSGNGTAAEQEPV
PDMTGVVDTTFDDKVRQHATTEMQVTAAQMQKQYDEIRHELDVLNKQRGD
DQRRIEKLGQDNAALAEQVKALGANPVTTTGEPVPHTPVSPPGPEGEPQP
GNTPMTFPPQGAVPPPTAFYPGNGVTPPPQVTYQSVPVPNRIQRKTFSYD
AAAKKGPSLPYIPSGSFAKTMLIEGADANASVTGNESTVPMQLRITGPVE
MPNSKTYDLTGCFVGLEAWGDVSSERAIVRTRNISCLKDGKTIDMSVKGH
VSFRGKNGIKGEVVMRNGKILGWAWGAGFVDGIGQGMERASQQAVGLGAT
ATYGAGDVFRMGIGGGASKAAQTLSDYYIKRAEQYHPVIPIGAGNEVTVV
FQDGFQLKTVEEMAQEQARHRKEDENAESPVPIPPSVDSHMNGFNTDQML
KQLGDLNPQQFMSGSQGGHVNGK
>gid:863152  traI  conjugative transfer: oriT nicking-unwinding
MMSIAQVRSAGSAAGYYSDRDNYYVLGSMEERWAGKGAEQLGLQGTVDKE
VFTRVLEGRLPDGADLSRQQDGGNKHRPGYDLTFSAPKSVSLMAMLAGDK
RLTEAHNQAVDIAVRQVEALASTRVMTDGQSETVLTGNLVMALFNHDTSR
DQEPQLHTHAVVVNVTQHDGEWKTLSSDKVGKTGFIENVYANQIAFGKIY
RAVLKEKVEALGYETEVVGKHGMWEMPGVPVEAFSSRSQAIREAVGEDAS
LKSRDVAALDTRKSKQHVDPEVKMAEWMQTLKDTGFDISAYRESADRRAE
IQAAQPVPSQEQPDIQQAVTQAIAGLSDRKVQFTYTDVLARTVGMLPPEA
GVIEKARAGIDEAISREQLIPLDREKGLFTSGIHVLDELSVRALSSDIMK
QNRVTVHPEKSVPRTGSYSDAVSVLAQDRPSLAIISGQGGAAGQRERVAE
LTMMAREQGREVQIIVADRRSQTNLKQDERLSGELITGRRQLQEGMLFSP
GSTVIVDQGEKLSLKETLTLLDGAARHNVQVLITDSGQRTGTGSALMAMK
EAGVNSYRWQGRQQTPATVISEPDRNVRYARLAGDFVAAVKAGEESVAQV
SGMREQAILAGMIRSELKTQGILGQQDTMMTALSPVWLDSRNRYLRDMYR
EGMVMEQWNPEKRSHDRYVIDRVTAQSHSLTLRDAQGETQMVRISALDSS
WSLFRPEKMPVADGERLMVTGKIPGLRVSVGDRLQVSAVNDGVMTVTVPG
RAEPASLPVGDSPFTALKLENGWVETPGHSVSDSAKVFASVTQMAMDNAT
LNSLARSGRDVRLYSSLDETRTAEKLSRHPSFTVVSEQIKARAGEVSLET
AISRQKAGLHTPAQQAIHLALPVVESKNLAFSQVDLLTEAKSFAAEGTGF
ADLGREIDAQIKRGDLLYVDVAKGYGTDLLISRASYDAEKSILHHILEGK
EAVTPLMERVPGELMETLTSGQRAATRMILETKDRFTVVQGYAGVGKTTQ
FRAVMSAVNLLPESERPRVVGLGPTHRAVGEMRSAGVEAQTLASFLHDTQ
LQQRSGETPDFSNTLFLLDESSMVGNTDMARAYALIAAGGGRAVASGDTD
QLQAIAPGQPFRLQQTRSAADVAIMKEIVRQTPELRDAVYSLINRDVNKA
LSGLENVKPVQVPRLKGAWAPENSVTEFSRLQERELAKAAQEAEKKGEAF
PDVPVTLYEAIVRDYTGRTPEAREQTLIVTHLNEDRRVLNSMIQDALAKP
GEQQVTVPVLTTANIRDGELRRLSTWEAHPGALALVDNVYHRIAGISKED
GLITLEDKAGNTRLISPREAAAEGVTLYNPETIRVGAGDRMRFTKSDRER
GYVANSVWTVTAVSGDSVTLSDGKQTRVVRPGQDRAEQHIDLAYAITAHS
AQGASETFAIALEGTEGGRKQMAGFESAYVALSRMKQHVQVYTDDRQGWV
KAINSAEQKGTAHDVLEPKSEREMMNAERLFSTARELRDVAAGRAVLRNA
GLAQGDSRARFIAPGRKYPQPYVALPAFDRNGKSAGIWLNPLTTDDGAGL
RGFTGEGRVKGSEEAQFVALQGSRNGESLLAGSMQDGVRIARENPDSGVV
VRIVGDGRPWNPVAITGGRVWGDIPDSNVQPGAGNGEPVTAEILAQRQAE
EAVRRETERRADEIVRKMAEDKSDLPEEKTAQAVREIAGQEQDRMTPPER
EPPLPESVLREPQRERETIREVARENRGRERLQQMEQEMVRDLQKEKTPG
GD
>gid:863129  trbD  conjugative transfer:
MIKMNIRNVISVPDESVQDDFVKYVISNCTTKIILSGRREYNFSRQEYNF
SVTGMPGAGKTCVLSELIKKLLRENKKGAKS