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2024-05-19 13:28:19

Gene list

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COG category: Replication, recombination and repair
Organism: Escherichia coli

Number of genes found: 43

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Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Escherichia coli
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA unknownSubName: Full=Probable plasmid replication initiation protein; SubName: Full=Putative replication protein; SubName: Full=Uncharacterized protein; p9123 CDS5144 444 + 0.551802
NA repressorSubName: Full=Repressor; SubName: Full=Resolvase; SubName: Full=TnpR; SubName: Full=TnpR of Tn3; SubName: Full=TnpR resolvase; pIGAL1 CDS3210 558 + 0.532258
NA TnpAIS26cp3SubName: Full=IS26 transposase; SubName: Full=IS26 transposase TnpA; SubName: Full=IS26-TnpA protein; SubName: Full=Mobile element protein; SubName: Full=Putative transposase; SubName: Full=TnpA transposase; SubName: Full=TnpAIS26cp1; SubName: Full=TnpAIS26cp4; SubName: Full=Transposase (TNP); SubName: Full=Transposase of IS15delta/26; p1658/97 CDS85798 705 + 0.531915
ECs1337 ECs1337SubName: Full=ECs1337; SubName: Full=ECs1337 protein; SubName: Full=IS66 family element orf1; SubName: Full=Putative IS element protein; SubName: Full=Transposase; SubName: Full=Uncharacterized protein; pC15-1a CDS45290 426 + 0.49061
ECs1339 ECs1339SubName: Full=ECs1339; SubName: Full=Putative IS element transposase; pC15-1a CDS46093 1614 + 0.54399
insA InsARecName: Full=Insertion element IS1 protein InsA; pC15-1a CDS86232 276 + 0.536232
insAcp1 InsAcp1RecName: Full=Insertion element IS1 protein InsA; p1658/97 CDS42781 276 + 0.536232
insAcp2 InsAcp2SubName: Full=InsAcp2; p1658/97 CDS68116 282 + 0.535461
insAcp3 InsAcp3SubName: Full=IS1 insA protein; SubName: Full=IS1 protein InsA; SubName: Full=IS1 transposase component; SubName: Full=InsA; SubName: Full=InsAcp3; SubName: Full=Insertion element IS1 protein; p1658/97 CDS103409 276 - 0.525362
insAcp4 InsAcp4RecName: Full=Insertion element IS1 protein InsA; p1658/97 CDS108139 276 + 0.528986
insAcp5 InsAcp5SubName: Full=InsAcp5; p1658/97 CDS113007 276 + 0.525362
insB InsBSubName: Full=IS1 transposase; SubName: Full=InsB; SubName: Full=InsB protein; SubName: Full=InsBcp1; SubName: Full=InsBcp4; SubName: Full=Transposase; SubName: Full=Transposase InsB IS1; SubName: Full=Transposition protein; SubName: Full=Transposition protein B; SubName: Full=Uncharacterized protein; pC15-1a CDS86426 504 + 0.551587
insBcp1 InsBcp1SubName: Full=IS1 transposase; SubName: Full=InsB; SubName: Full=InsB protein; SubName: Full=InsBcp1; SubName: Full=InsBcp4; SubName: Full=Transposase; SubName: Full=Transposase InsB IS1; SubName: Full=Transposition protein; SubName: Full=Transposition protein B; SubName: Full=Uncharacterized protein; p1658/97 CDS42975 504 + 0.549603
insBcp2 InsBcp2SubName: Full=InsBcp2; p1658/97 CDS68316 504 + 0.531746
insBcp3 InsBcp3SubName: Full=INSB; SubName: Full=IS1 InsB protein; SubName: Full=IS1 protein InsB; SubName: Full=IS1 transposase InsAB; SubName: Full=IS1 transposase InsB; SubName: Full=InsB; SubName: Full=InsBcp3; SubName: Full=Putative transposase; SubName: Full=Transposase; SubName: Full=Uncharacterized protein; p1658/97 CDS102987 504 - 0.543651
insBcp4 InsBcp4SubName: Full=IS1 transposase; SubName: Full=InsB; SubName: Full=InsB protein; SubName: Full=InsBcp1; SubName: Full=InsBcp4; SubName: Full=Transposase; SubName: Full=Transposase InsB IS1; SubName: Full=Transposition protein; SubName: Full=Transposition protein B; SubName: Full=Uncharacterized protein; p1658/97 CDS108333 504 + 0.547619
insBcp5 InsBcp5SubName: Full=InsB; SubName: Full=InsB transposase; SubName: Full=InsBcp5; SubName: Full=Transposase; p1658/97 CDS113201 504 + 0.545635
int IntSubName: Full=Int; SubName: Full=Putative site-specific recombinase; p1658/97 CDS99056 741 + 0.573549
intI1 IntI1SubName: Full=Class 1 integrase; SubName: Full=Class 1 integrase IntI1; SubName: Full=DNA integrase; SubName: Full=IntI1; SubName: Full=IntI1 integrase; SubName: Full=Integrase; SubName: Full=Integrase protein Int; SubName: Full=Integrase protein IntI1; p1658/97 CDS84086 1014 + 0.610454
orf17 putative proteinSubName: Full=Uncharacterized protein; p1658/97 CDS50501 285 + 0.526316
orf20 hypothetical proteinSubName: Full=Uncharacterized protein; p1658/97 CDS56493 3702 - 0.453809
orf27 putative ATP-binding proteinSubName: Full=Putative ATP-binding protein; p1658/97 CDS70727 783 - 0.50447
orf54 putative proteinSubName: Full=Uncharacterized protein; p1658/97 CDS113715 768 - 0.509115
orfA hypothetical proteinSubName: Full=Uncharacterized protein; SubName: Full=YeaA protein; p1658/97 CDS35903 462 + 0.474026
ssb SsbRecName: Full=Single-stranded DNA-binding protein; p1658/97 CDS120107 528 + 0.583333
ssb ssbRecName: Full=Single-stranded DNA-binding protein; pC15-1a CDS40334 567 + 0.567901
tnpA TnpASubName: Full=IS26 transposase; SubName: Full=IS26 transposase TnpA; SubName: Full=IS26-TnpA protein; SubName: Full=Mobile element protein; SubName: Full=Putative transposase; SubName: Full=TnpA transposase; SubName: Full=TnpAIS26cp1; SubName: Full=TnpAIS26cp4; SubName: Full=Transposase (TNP); SubName: Full=Transposase of IS15delta/26; pC15-1a CDS9705 705 + 0.531915
tnpA TnpASubName: Full=IS26 transposase; SubName: Full=IS26 transposase TnpA; SubName: Full=IS26-TnpA protein; SubName: Full=Mobile element protein; SubName: Full=Putative transposase; SubName: Full=TnpA transposase; SubName: Full=TnpAIS26cp1; SubName: Full=TnpAIS26cp4; SubName: Full=Transposase (TNP); SubName: Full=Transposase of IS15delta/26; pC15-1a CDS13528 705 - 0.531915
tnpA TnpASubName: Full=IS26 transposase; SubName: Full=IS26 transposase TnpA; SubName: Full=IS26-TnpA protein; SubName: Full=Mobile element protein; SubName: Full=Putative transposase; SubName: Full=TnpA transposase; SubName: Full=TnpAIS26cp1; SubName: Full=TnpAIS26cp4; SubName: Full=Transposase (TNP); SubName: Full=Transposase of IS15delta/26; pC15-1a CDS16948 705 - 0.531915
tnpA TnpASubName: Full=IS15 transposase; SubName: Full=IS26 transposase; SubName: Full=IS26-TnpA protein; SubName: Full=Putative transposase; SubName: Full=TnpA; SubName: Full=Transposase; SubName: Full=Transposase of IS15delta/26; pC15-1a CDS27671 705 - 0.52766
tnpA1 putative transposaseSubName: Full=Putative transposase; p1658/97 CDS50833 804 + 0.548507
tnpA4 IS100 transposaseSubName: Full=IS100 transposase; SubName: Full=Putative transposase; SubName: Full=Transposase; SubName: Full=Uncharacterized protein; p1658/97 CDS71506 1023 - 0.526882
tnpAIS26cp1 TnpAIS26cp1SubName: Full=IS26 transposase; SubName: Full=IS26 transposase TnpA; SubName: Full=IS26-TnpA protein; SubName: Full=Mobile element protein; SubName: Full=Putative transposase; SubName: Full=TnpA transposase; SubName: Full=TnpAIS26cp1; SubName: Full=TnpAIS26cp4; SubName: Full=Transposase (TNP); SubName: Full=Transposase of IS15delta/26; p1658/97 CDS47200 705 + 0.531915
tnpAIS26cp2 TnpAIS26cp2SubName: Full=IS26 transposase; SubName: Full=IS26 transposase TnpA; SubName: Full=IS26-TnpA protein; SubName: Full=Mobile element protein; SubName: Full=Putative transposase; SubName: Full=TnpA transposase; SubName: Full=TnpAIS26cp1; SubName: Full=TnpAIS26cp4; SubName: Full=Transposase (TNP); SubName: Full=Transposase of IS15delta/26; p1658/97 CDS77799 705 - 0.531915
tnpAIS26cp4 TnpAIS26cp4SubName: Full=IS26 transposase; SubName: Full=IS26 transposase TnpA; SubName: Full=IS26-TnpA protein; SubName: Full=Mobile element protein; SubName: Full=Putative transposase; SubName: Full=TnpA transposase; SubName: Full=TnpAIS26cp1; SubName: Full=TnpAIS26cp4; SubName: Full=Transposase (TNP); SubName: Full=Transposase of IS15delta/26; p1658/97 CDS94615 705 + 0.531915
tnpR TnpRSubName: Full=TnpR; pC15-1a CDS3026 606 + 0.559406
tnpR TnpRSubName: Full=Recombinase; SubName: Full=Resolvase; SubName: Full=Resolvase, N terminal domain protein; SubName: Full=Resolvase, N-terminal domain; SubName: Full=Tn2 TnpR resolvase; SubName: Full=Tn2a TnpR resolvase; SubName: Full=Tn3 tnpR; SubName: Full=TnpR; SubName: Full=TnpR Tn3 protein; SubName: Full=Uncharacterized protein; pC15-1a CDS23310 558 + 0.526882
tpnA TnpASubName: Full=IS26 transposase; SubName: Full=IS26 transposase TnpA; SubName: Full=IS26-TnpA protein; SubName: Full=Mobile element protein; SubName: Full=Putative transposase; SubName: Full=TnpA transposase; SubName: Full=TnpAIS26cp1; SubName: Full=TnpAIS26cp4; SubName: Full=Transposase (TNP); SubName: Full=Transposase of IS15delta/26; pC15-1a CDS12377 705 - 0.531915
traI TraISubName: Full=Conjugal transfer DNA-nicking and unwinding protein TraI; SubName: Full=Conjugal transfer DNA-nicking and unwinding protein Trai; SubName: Full=Conjugal transfer nickase/helicase; SubName: Full=Conjugal transfer nickase/helicase TraI; SubName: Full=TraI; pC15-1a CDS77993 5271 + 0.599507
traI TraISubName: Full=TraI; p1658/97 CDS28659 5271 + 0.596851
ycgA YcgASubName: Full=YcgA; pC15-1a CDS32589 648 + 0.58179
yciB YciBSubName: Full=Anti-restriction protein; SubName: Full=Anti-restriction protein klcA; SubName: Full=Antirestriction family protein; SubName: Full=Antirestriction protein; SubName: Full=Antirestriction protein KlcA; SubName: Full=KlcA protein; SubName: Full=Putative antirestriction protein; SubName: Full=Uncharacterized protein; SubName: Full=YcgB; SubName: Full=YciB; pC15-1a CDS35151 426 + 0.546948
yigB YigBSubName: Full=Uncharacterized protein; SubName: Full=YigB; pC15-1a CDS86974 462 + 0.480519