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# Mycoplasma pneumoniae M129, M129

>gid:854140  A65_orf475  conserved hypothetical protein, similar to reticulocyte binding protein
MLASLTSRSATSFSIIWALVSAILILSILIWLIITIFFAWNLHLKNNKKR
TKYHLEPEQIKHKIIQNKTKLGKMLDFYQQQINTTATELKWLDGQFQQID
ETDKKKAHQIAIRLARNQLLQQLSVKLDQKQFSQRANNELQKLKLSNLES
FTNQKIKWDQEGMKSAVSRVTINEWTFNHFAGKNRVYWDYFKQVCDVDCS
IKPLKDQLEITFSSWSLLKRLQAKNLFNKLIAQSSSVKMSEKLINNALQL
VQDNLALQASESGNKLLKEFELSCTNTQLVQLLGFQQFYFGTNLLSLLDL
SRSIAVLVRFLNEHCKWELNERLLVETALFNNLQWVNNNDFFLKSHNDLK
QLHLSAEQLAIIEQQNRPFYIDAYALLIAGVKQMLMEHDAVEPKQIHFHN
AKKVMESFQLFGIDQLALIEYNNCLYGFVTTKLYEIKQLDDLALFKVLFK
SFLNKHLKQKFATISLFVNTQTLMI
>gid:853982  C09_orf143b  Similarity with Ribonuclease HII
MQHANTTALYLIGSDESGKGDSFGGIAVSAVLIHKDKINTLHQIGVGDSK
QFNDYQIKALVPKIKAAVHDQVTLSVDAKTYNQLVQSFKNVNVMLTFLHC
KVYHQLLQQNKLTAQQCDISIDEFANVKLFTQYTQKLTSLQNELKELVIP
NHFLIRGESYSKVIAAASILARAAFIAQMEQLSHQYGVQFPKGSAHGIVE
ALHLLKTKRQFHKFAQYSAVCKTTFKNVASFLKQLA
>gid:853971  C09_orf251  conserved hypothetical protein
MTNQNLQDFLDGVLLKEENLNKITEVSLEKGLPHLLDEGIHNEDNFQIFT
SQKIVADMIKMVGVKEMKNVHTTVLEPTSGDGAFTCAILDLRLKNIKKSD
SFLKEALTGLSTIYSVEIDEELVWLQRNNLYSIFLAFLKKHGIFNEELSL
LVKKILMINVSWGELITETKDNENFVCNYDYFLRNKKTKKKPAKHKHEFP
EGLFSNGEGKCKSLFVNWSFADVINEIAHNSNFYFAKIAKIPGEIIQFQI
N
>gid:853972  C09_orf404  conserved hypothetical protein, see: MPN111
MSQNGDKDHELIQGKVKSKTEIEDSVILDQDTLQGKGEEKTKLDELIRWE
AEKNDLLKLIDNVGNDEVFTTVETCQRMLDDLFPQDHEVWSNPDLKWLNP
CDKNGVFFREIALRLDKGLAKVIPDEYERKKHIMTKMLFSIDLTKFTSLM
VRRTLYYCIKANKRKTSEDEGCAIANGAWFNNECGNVVKPYKEHYFDKQG
KNKKCKFCRTDEKFKYQQSSSNEKYAYDFIHLNPNEYESYFKTNFGVMKF
DVIIGNPPYQLANNRGGDAGDGNGANPIFQEFILRALELQPKYLAMIVPA
RWINSSEKVFLKFRAKLQKSNGFKGINIFFDSKHCFPNRQIKGGVCYFNW
QNGYEGQTLITTKSSKKGKQEEIETYKRDFFAPVLNNTEQVIFRKKFDTT
FIKR
>gid:853975  C09_orf422  conserved hypothetical protein
MNKNSGKDYESIQGKIKSKAEIEDSVILDQDTFQGKGEEKTKLDELIRWE
AEKNDLLKLIDNVGNDEVFTPVETCQRMLDELFPEDHEVWSNPDLKWLNP
CDKNGVFFREIALRLDKGLTKIIPDEYARKKHIMTKMLFSIGLTKFTSLM
VRRTLYYCIKANKRKTSEDEGCAIANGARFNNEFGNVVTPYKEHYFGKES
KSKNCHFCGTNKNSKYVNSMTEEKYAYDFIHLNSDEYENYFKTNFGVMKF
DVIIGNPPYQLSNGSGSDGNGAKAIFQDFVLKAIDLEPKYLAMIIPAKWM
ISAENIFLNLRDKLKKNKDIKEINIFFDSKDCFPKREIKGGICYFIWQNN
YQGKTLINTKFSKKGKSTEIDSSKRNLFVSVLNNTEQIIFRKRIWQDIYT
KIDSISASEMKNTHTEREQFRS
>gid:854028  E07_orf1113  conserved hypothetical protein, MG140 homolog, from M. genitalium
MNDWQWLKNRLVNAKTKAVSFWLAQTTSTILDIAELIKCCSDLKNTSING
LVDLINQQEKLEFNLTRLKEIDGEDARQLFGIEGNVYKHFQTELSRFYKQ
TRKHFRETGSESLFLGLPVIEGINEFNDVFRAPLLYVGVKLKVAPRLERF
WLEINREEIFLNPTIIGVEINKRNSLFKNNYDTTKVDINQALEIFRELEY
QFRMPLTSELKSFSKKAKSDFNTEKRTNFLTNNVLLGIFDVKGDQLFQNF
NEILNTDPDVLDELLKDRRDLLYDNREFRENFNLKGTYLFSHLDIFQQYA
VKQAFDGDVIIEGPPGTGKSETIVNILVNLALNKKKVLFVSEKVTALDVV
YNRLGSFKHIALFNASVASEKKRFYSQFADYESFFTDNFSKKDLVNEMPV
FDGQWVDKILSEFTNLQNIYDTQINSGNQSYSFKEILSSFPILDVSYIKI
KEHDRFDEWVRVFSSQVWLEKHLTYLAFKAELSKRWQNIDNFYALKDLLE
KRKNIRVLCYVLDYFEQNNSIIKPKRVLLYTPTERGQKQLHQLQQDVAKY
NSLQRFKSAAKFETIKLNLANKLAQNAKPFFFSWFIQTHAQTLLENLVQT
QKQLVKAKQSYLSKIEQYVVSCKRILKATILANFFELYQTNKNELLDICR
EAKNPVLKEITWWFKKNFALLSKLFPVHIMTFESAALLTPNQRRLYDYVV
IDEASQVYLERAIPILYRGAKYIIAGDTKQLKPSNFFQARAEYDVDEEFE
DGNVEAAVHSTSLLHFLKNRSRILTLLKFHYRSDSANLIAFTNNRIYNNE
LIFMNKATADKQVFIVHDVIDGIWRNNRNLQEARDVVQRLEQLTQTAEYQ
KSLGVICFNKNQAELIEYMIDKQNNPLLNEWRDRVNAQGEYVGLFVKNIE
NVQGDERDIIIFSLGYDRSVNSYGPISKQGGENRLNVAITRAKQRIELFK
TNRASDYNGLSSNSLGSKLLVEYLLYCEAMANNQGESLDFQATQKQAPKA
KYELELENQFFNELELIFGEQFTIKRNVNEGAYSFSFVFYFNENPYLAVD
FNPALPHSRKEVSENIIYREQFLKKRKWNLVNIWLDEWKLNPGGVLQKLR
NCLTHSENEFEEI
>gid:854002  E07_orf301  putative lipoprotein, MG186 homolog, from M. genitalium
MKGFSCSRPGYLTGLLLLAVAPILTACTRDYTTKNEFQLTTAQQAKLKPA
TIEYWRDGDTPEINYASEERRKEAEQKSKENAKKEDKKEEKKTEDSQDSS
SASTQVRSSKHGLRIYGIDTPEKHVSSKGDSTGDEKIEAEKASNYAEKLI
PKGSTVWVWSLNTYSYDREVGALFFKSNPKQTFFQSFEVAMVEAGHAIPI
AGTGLNLIADPELSADDPLSVIGLQLANAANKAYNAKINIWSHDTDGYRS
LTAVYKLRGADISWTRFLDEANGYSSASAGTGASLYQLWDQRQAKLAQKG
S
>gid:854590  E09_orf204o  hypothetical protein, see: MPN013
MSNNNKYFTITKKQYKKMRRNKIELLFNVKVLKKKNGRQKFKILHEVENK
PKIPIKIIEDQPESPKPLKPPKPPKPPKGPDNPEEPDSPEEPKETDQPGG
PDNPNAGNKKMPTPEEYVTRKEFNEFKDSNNQRLTKIENKVDKLEVKVDK
LAEIVQTQGEEIKELKVEQKAQSETLQLILKTLQKMNDRLDRMETRLDKI
DSPK
>gid:854198  F10_orf1818  Cytadherence High Molecular Weight Protein 2 (SwissProt HMW2_MYCPN)
MNDTDKKFPLQPVYDTGFDDGYLQRDYEKCLESAAANDAQTVELQTQLLA
EIKNLENEIKALKAQESRQPDPHNNARIQSLEASLNRLVNEYNNFEFQKN
YMVDRVAELNNKARFFKDELKRLQQENAAFVNSRYANWADFQSNYQLKLD
QFQALIDQQNQTIKQLNEQIAANQGLIDQNVQRLQQNHSLDQQERDALLY
EVDHLYNELYELENQKRLVGIEYEATYQDLVSADAELQNVYETIAQNQAN
FQKQCDAYWAQLKQVEQQIQTTKQELVDEESTLKVRLNDADFYINSRLAE
LDDLTSKINERDFVSKEQAQDVKASLANLTKEKERLSAEKDSFERLRNTA
LNDINRMEQENALFAKHLEQQQYEFERKQQESLLKLETEHKQLQKRIGEF
KIESEAKSEALLIQERELLEKRREIDDLLTQASLEYEQQRRTNQVLKEKH
RQVQQHFQNLVHAKKKLDQKRHYLAEQKRIDEEQIFKLKEKIATERRELE
KLYLVKKQKQDQKENDLLIFEKQLRQYQADFENEIEEKQNELFASQKSLQ
KSFTQLKNKEAELNQKAQKIAEDWAHLKQNKHHHADLEIFLEGEFNHLQQ
EKHKLLEARTQFDNRVSLLSARFKQKQAELVKQKQSLEQLTAAFNKEQEA
VERDWKDRLANLEKQKEMLGDKVHQFDENSLNISKKLAERELAIKFKEKE
LEAAQKQLSLDNNNNAGLKLQLDKLSESLKTERLELEASKERILDFYDES
SRRIADYESDLQARLAEVKTLEKNQQETAAKSERELKVALEKLNQAKKAF
LQIRKQQLLEIASVKQQLAQKANLLKNQQAELDKQTEELEAAFLEQDTDK
KELEKALHSVKSKQELLERERSFLLQKQREFAEHVAGFKRQVHFKTTQMQ
RLSEFNKQQQSEQIKRETELKIAFADLKKDYQLFELQKNQEFQQIEQKHK
ELELLAQKQAELKQELEQKATALASQDQDTVQAKLDLARQQHELELRQNA
FNQASLSLNKQREQLTNQVKVLHGELKKRHEKLTLKDRLLAEKEKDQHKK
DAEINQRFKQFENEYADFDQAKKRELQELNQIRRNLEQSNASLLKKRNQL
TLDFALLRKVQHNTQTNRVQLNTQIKEFLLEKKNFQKASDEAALQKALLI
KRLRSFASKLQLQREALAIQKLEFDKRDEQQKSEINNAKLQLEQFKLEKQ
NFDEAKQKQLIEFKDQCQRLDVEKRLLKQKLVQLKNLSKSYLTYKNRADL
SQQQLQHKYANLLELKEKLQTAKRALDKKHRAIYGKMAQFVSELRQEKKQ
LLSAQKQVDDKSRLLEQNQRHLQNLSSETKKKRQSLEHDINKFDQRRKEA
VSSILNSHKKLKQKEGELQGILQKLSLKKTQIEQEFSKLYQQREKLDRQR
TTLSKLHRELKAQNEATAHKNREVLEIENYYKKELQRLTTEKSEFDNNKN
RLFEYFRKIRNEIEKKEAHIKTVLEETQKKRHLVETEAVKLHLQKQSIIS
KGQELKEIKERVSRDISHTNKQREELNSLLHQNKLLQKNLAEREREINNK
DSLLTQKIQTAKQKLSEKEARILKLLEKMRAVEQQYQAEITRLKTRNADL
EKNDNKHLFPPLFKINGNDMNYPYPYPWFYPQQKQEDSSNQIRHLFEQQL
QFMQQRYENELTELRRQRALLEKKLDQIQLESQLSAKKNDFEKVEQMMQK
LLEKTEQKLSAFDQKINALAEQINTQKAEHADSEKQQLLLRIEQLEKQNL
AQAVQTPQPVQPVVQAPAVVPQVIQPQVVQSQPAFLATQQSISKQQQIAQ
LNAEINSIKKLIAQKAAK
>gid:854227  F10_orf632o  conserved hypothetical protein
MEFNKLQLSHCISFYISDVSEVFFESINQHPSRDFVNNILQKIKSTLSEE
ELEKLNTIEEVTKDEKILIMLNHVLKKIVSKTGSSSCDLFQIVKHDRFNE
PVYIQSVNAFENNLINNEFAERRYDYLIEINKHSYLRKYVNAIRISFFLD
LRAQILSGSFTLDVINKQLEHQNKEELFQAIYLRSLIKHFISNQLYPISL
NSFIFGDKNRENKTVENDKLSVLKNNWNQIFFSKYFDFVAKNKEERVVDN
NCDELFYATMNTLLIMLIIIEELRVYFNSKEPALILKLLDNKVSLREDPD
QNPETDLHELIKFAEKNYLEKEKTSRWHKKRVKSLEELLEEIKQINLETK
NESLAYPDEIVELELDNVHNFVSTKQVFRHQLDLQTLHGIVINPERYGIG
MWSNHFVDWEEFKDLIEQITDAENGSDLYGFEKDLDESICQVNKKYLTFI
SSDSSSFLIIKNDQTKVISNYVWAQLYFETRRWIINDIEYDLYEKGFDKS
HFASNIALLESLNFNWLDPFYGLTSIKEIMQKIDSKSNLKTSIAEMVAKF
KHEQRISKKDNERVLMIFAYVAAAVVGFINFFSMVFTILTVSDLNAGLTP
ANIVVIAIASLLALFLIVIAVLFRFRWKYIKH
>gid:854463  G12_orf109  bacterial histone like protein
MEKTTTSSKPLSRSEINKIIAVATGVKEAKIKEIFKYLNTLLLNELVSRS
VCILPENLGKLRITIRNARIQKDMKTGEMKHIPPKPLVRYSPSKTIKETA
AKVRWKYAD
>gid:854458  G12_orf413  conserved hypothetical protein
MQPNYYRVIKKATSFSGLDMISHAYGQIAGVEVVGFYLWLITEANAQAFN
SEIRTPISRLQNAFNTTGTKNVNVPDWIYKTIGKLESLGLVRTFFSQEKS
EMTFWIVEPLGWKEFNQKKHFKEKLIESMGKLEYDRNCLSFEQIDNIQFD
NALEITANFEANFTSKQDCLSFSFDFEAFHKQLVKQNLFVSFNQKTKAVI
NGYFEKYQITLEGILECVIPSVVNDEVDLELLQKLLEQLVKNNTAPIVDT
VINDRNFFYDNQNLATETKDAISRCHLEYNAEKYLFLLYGKVENEQLDLI
RRLRQEFGIADKVINLIVDFSFWKNNSMWREQYILKIAESVERYRSHNNY
QATLDNFIRASSLAKKQRTKTKIEKSEPETSAAPVNETDDVNYFLNRIKA
INKKNRENGKHKR
>gid:854350  H08_orf726  
MQQQGETKDQYNTFGLRLVRNSVGVSVLGLDGFVKFIKGGSGGSNGGSSS
AKKIDKEEQKKFLKFRAFQAKIGTFYNTNFAFSFPLNETLKGWFDKHRGL
ILANALVKVTLDTKEKASKALVDAFSSYKNWLSEYTPVGLATTMISFYFD
QMKALNNKLLERVRSLNQNVNQANPTPWLNGLSAKLPYVNTNGNYEKLNN
YFTFLITKVLWPKVGTEDTNVSEEKSKLKTKTEDVNKIREKILNNIDSKL
KTFVQKLKPTLAPRPAYSNVILLNINNDKVWSAGANWSLAVLLDPKKVNP
LSFMLLKQMFDQNSLFKKAKTLFENIQNKAKTSGSGKSGTTTNDDADALS
KVIGNYYYNTWAKLTDKSIYGNLKDDKFDDLFKLAFDSSINEKSFNVDYK
AVIEHYRFIYTLEWLVDKNLKNFKDLLKANLKFGEIAFIAYKNTETQNFS
NPQGIFGSYFNYENETNAAKSATQIIDPNSFFYKTTTKPEAKTTQSANTA
VMVQNTQMNNQQTNSYGFTGLSTSSGSMLGAATQQAILDQITKTSLQQYG
SQADLKKIIGETKNQLLLDRIANQLIALKPNTSGNSGTQKTIAAYFQTDA
VGNPTLDFKAKQKLLLDVLDQYKDFFGNNAQAVQRDSGKSGTGNYLTYTD
GSDKITYLQFSYKDIDGLSLSSSNGTSSKFASDVVAALLLFQAAYKGTQQ
LALSSINKPQLPIGDKRIKTGIDLLK
>gid:854177  H10_orf149  conserved hypothetical protein
MDNDKKDKIILSGELTNHRFNFTKDGENGYSAYEVDRFLDQLVHTLTHYE
AQRNREEEMKTAYEKLFQDRDEILKRCSKLEAELNNFYENGYSNRVLISR
VQALENKIESLPSGQNDRLERIEKLLKRVIKHWTDGEDLSYGDFDDDFF
>gid:854117  K04_orf222  conserved hypothetical protein
MISAKEQAKKGQIIYRYILLKIQSFKWPAGTRIFSERQLEIRFASSRSLI
RTILNTLLGKDLIRHTKGNAGYFVAKNAGFSFFHKTQDNKLPKWAKLSTL
MKNHLREVDRDVFSSIDSGVDFGNFKGLEAKLFDENKKNFLNLSFFGKDD
VLQIFSEQNLQEQFFKDFAYNGIVVERKSSLICVDDETKNLLIYDLFYDD
NNKFIVAMRSEYLNPRIKIINA
>gid:854126  K04_orf389  Ser/Thr/Tyr protein kinase
MALNLKIGDIVQNKYRIEKLINRGGMNSYLFLASNLHVQEFGPLQKRQFT
RLVLKVVQRTDKINDNNWKKFLDGTITTTRVSHKNLVQTFDVVSPRLSVL
SENQVIVLEDTVMIVMEYVDGPSLREMLNQKGYFSVQEVVYYFTKLVKVI
NYLHSFEHQIIHRDLKPENILFTSNLTDIKLLDFGIASAVIRNAEKTEVL
TDENSLFGTVSYMTPEVLESTVNKEGKRIRKPPTVQYDIYSLGVILFEML
VGRVPFNKSIDPKKERETIQKARNFDVPLMGNLRSDVPVSLENIVFKCTA
VKRENSKWMYSDTKQLLADLAQWQTEQTLIKPVHERILEGQNEMRELMVS
NYLPWYLRKGVLIFFSVVLLALLIAVVSFFIITGVVVHS
>gid:854328  MPN418  conserved hypothetical protein
MQYILGIDFGLKRIGTALVNTIDRFPSPFRVFAVQNNLQQAVNTLFKDLK
QAGYELVQIVIGFPHFHYQSSIQVSIHKFVELIKTRFNVPVTLIDESGTT
SEVKANLQELGLKNRTFKKAKDTLAATLILERFLNQQKPN
>gid:854409  P02_orf103b  hypothetical protein, see: MPN013
MGFYGNLNHMEKRKSGYVTQKQFNDFKNSNNQRLIKIENTLVSQGEQISQ
LIKVSILQGEQINKLTETVEKQGEQIQTQGETLKLILETLQVINKRLDRL
ESK
>gid:854434  P02_orf126  hypothetical protein, see: MPN013
MKEKISEKEYKALIRKTGKEHFDGEKEEYGDGTVGVWTYELRKYKLKPPV
KVKYVTQEQFQEYKDSNNQRLIKIENKVDKLVEIVQIHGEQIKAQGETLQ
LILQTLQKMSDRLDKMEKRIDKLESK
>gid:854558  deaD  similar to ATP-dependent RNA helicase deaD
MDSTFNELGVSPALIATLKDNNINQPTTIQQLAIPQFLQHQNLIVHSPTG
TGKTAVFGIPVIETLLKKPSKGTTQTLVVAPTRELAEQIKTTFINFAKHT
HLKVVSLIGGIPIWQQLKQLENQPEIVVGTMGRVMDLLERGVIKFEHLEH
LIIDEVDLMLDRGFKRKLFDLLSRIEKFEQIAVYSASYNEETIETAKQIT
KNGIFLAAPELKQNAPEPDNKLIDQFVCYLFSNRKKQALYSLVSQTRAKS
IIVFCDTKKLVDELCIFLRKNDVKTYPLHGDKAQFIRERNLKLFANTTAP
IVLVTTDLIGRGIHVEGVDMVVNYSACVNFETYLHRMGRTGRNNHKGSCI
TFCTSHEKQAFLKLLEQVNDKRISPLRPMRLRLIPLKCKTQPKKGKLSLQ
SVQKIYVNPRSNGTFKRVPLAGDLFKSRMRQPERDMQKNKLHDSDWQSNM
>gid:854353  deaD  RNA helicase, eIF4-A translation initiation factor
MHFIQPLQAFLQTKHIVEFSSIQQAVFKVWPRQNVVGIAETGSGKTFAYL
LPALNQIDVTLNKPQAVVFVPTKELKWQILTILNDIKASFTGLKVSENFN
SNAHLIVSLIGKDIILHETIKYVVFDEVDMFLEDSSQAEWINCVQLFQKH
KPHFGFFSATLFNEQLQQIRKQVAPLTVVNQKKRAWKHSLVKHFLLNLNG
QEPFAGLLALLNYHHNEQVLVFCSNAKSLKQLTSLLAHNQLSFKSLHGQL
TPNERKHIFTSAANNTVRVLVVSDLLARGIDLPHFSVVISWDLPLVDSFY
IHRSGRVARFNSWGNSYVFDLPHNQHKLTKFAHKGILFNSVHLERDGTLK
FPQLKQSKQKPAVSSELKTAIKRIKAGYKKVKPNYKKRQKQQIAELFAKR
KQRRSWKNF
>gid:854621  dnaA  chromosomal replication initiator protein DnaA
MEQFSAFKLLLKKQYETTLGFYDKYIKNLKRFALKNNVLFVIVDNEFARE
TLNSNPDIVGLASKLYDDIRAVRFVNEQDFFINLAKLEEDNRETLYQSSG
LSKNFTFKNFVVGDGNRRVYEAGVRISETQDADFSPLFIYGETGLGKTHL
LQAIGNDKFFHFPNAKVKYVVSSDFAQEVVNAFYQKEKDQGIEKLKAAYE
SLDLLLIDDTQIFGKKEKTLEILFSIFNNLVSKGKQIVFVSDKTPDELAN
IDPRMVSRFKSGLLLKIEKHNLSSLCEILAVKLKEKDPNIQITNEAREKA
AQISGNDVRSLNGIATKLLFYVKTTKQNLINNDNLKEILFEEFEKFHKKS
FDPYLLIENVCRRFNVPVDSVLSENRKAELVRVRDVCNYILREKYKMQFQ
QIGKIFKRNHSTVVAAVKRVAKMIEKDDSLQDIITSLVI
>gid:854110  dnaB  replicative DNA helicase DnaB
MVSNKLEQTFKFANDKNIERAERVLMQALVQDAVGVDLILTKLEPKDFFG
FPFNFIFQTAQENYSEGNKLFGSALLEAVKFKLDTDSKTQREIEGLFEDV
LLKGLPFLERDIKVFVDVVKKASIFRQLKQFAKKVEKEEFKVKDDRFEGY
LQAIQNDFTKIIHSAFVSIPGLSYDEIVREEEELIPKVYRGELTVKGLKS
GFYPLDQLTSGWKEGELIVVAARPGRGKTALLINFLQGAVNDSEKFDKNK
DVLLFFSLEMRNREIYQRHLMLESQVNYTLTSRQRLANVYDDLIKASEVL
RDLPIKIFDYSTITLDEIRAQITEVSKTNNVKLVVIDYLQLVNAFKNSYN
ISRQQEVTMISKSLKSFAKEFNVPIIAAAQLSRRIEERKDSRPILSDLRE
SGSIEQDADMVLFIHRVKDEDSENQEAIGHNNIFQVELILEKNRSGPTGK
VQFDFQSDVSTFRVREYNPDGYS
>gid:854275  dnaE  DNA polymerase III alpha subunit
MFVNLHTNSYYNFLNSTLSPQKLVDLAVQDQQVAVCLTDPNLFGATEFFL
ACQKAHIKPLIGLSVTVRHYEQNVNLLVIAQTNRGYQNLMCLALVKDQPD
LQLEPFLDGNVVIICTQTELRLNTANPVYLAHGLSGRYPKIAVTQKPVKC
QNTNKDLTLLLTLKQISQINSEHFQPLEWKLSRSLNEIQLDPPLLQQLRH
QPFLSQKAAQQIFSEEELGNLQKLVEQSQWDLTKLKASSLQVSHNDAQML
SEQCQLALTEFLKLNPQLNKQLYEERLAKELEIINSLHFASYFLVVSDLV
QFAHNNDILIGPGRGSAVGSLVAFLLKITQIDPVANNLIFERFISRHRQG
LPDIDIDIMETKRDLVIDYVMQKYGREQCAQIVTFQKFKTRSALRDVGKV
FNHIEGAEDLLGKLPKDKSLLELDVNGVTDPVLQLSLKSFRLLWEVAREI
INFPRQPSIHASGVVIVTEPLITTIPLMVGNNNNYVTQVSMDWLEWYNLN
KFDLLGLINLTMIHEVVQAVKPKEVSVQQFLQQIPLDDEATFTNLTNQAT
LGVFQLESFGMKKVLKQIKPHNLHDLAIVLALYRPGPQDNINTFIANRNL
GFDTSDIDPRILPILKETYGVLIFQEQVINIAKTVANYSLETADSFRRAI
SKKNLQVIQDNMRSFYEGALANNFSLKAATTIFNYIQRFAGYGFNLSHAL
GYALLSYWTAWLKTHYFEQFNLWWLNHEQGKKEKQKQLLNEFISSGYEIC
PPLINKAKSDFSVQDKKLYLGFKLINGIGDKQAHALEHVQEVLKQNPNLS
LIATVNLCLSKTVGGLELKDITLLQQAGCFNCFNYTVDFNLAKSFWVQSN
HELFPKIPLDQPPVINWKSFGF
>gid:853865  dnaE  conserved hypothetical protein
MELRNTKLEQLFYIYHRNLKYRCPMQYLTKRGFNLQDLLSVGGGLAYLGE
KQWLNLSLYNFNNQLVGFLSRKVGFEKKFLYLPINKPPSKSESFLGLKHL
PTETNTIYLVEGDFDWLAFRKGGILNCLPLCGLTLSDKQMKFFQQSKIEK
VVLCLDNDFAGKVAAANLERILKNAGFQVKVVQLKGKVKDWNELLLLYPK
NWAKALRDHLAL
>gid:854242  dnaE  DNA primase
MTSPTSLDQLKQQIKIAPIVEHYAIKLKKKGKDFVALCPFHADQNPSMTV
SVAKNIFKCFSCQVGGDGIAFIQKIDQVDWKTALNKALSILNLDSQYAVN
FYLKEVDPKLKRYWDLHSALVDYYQTRLKLEPKEQGLTYLTETRKLSPQV
IERFQLGLAFTLEDQYFLPSLLNYPWISPAIEKAELCFATEKFPEALGFF
NQQTHYATFKSRIMIPIHDLKGNPVGFSGRALQKTEKIKYKNSAEHQWFK
KSELLFNFHRIDKNTLKLYLVEGYFDVFALTSAGIGDVVGLMGLALSESH
IIAFQQQLKALETVVLALDNDTAGHDATFKLLQELNAHGIIVEVVDWNQA
AYKDWDELFLAEGSDAVKAKTHRVLNLVEYLVAYFKTKGFDERITVNKVI
DIIAQNQKVTADTSFSRFLCQKLQQLLQYSDVETLFTQLQQQKLKVKVNK
TTTFTQRAPIYESVVGVVDNSFRNESQPVAITKEFLVENNWKETKERVFH
AEIFAYVLLDKQFLVELKQSDLDELFASLQTPLFDVALFIDKARLYWAKV
QEPDWAVFNSILGEQQAMFPTTFLAQIKEFFLNKSLSYDPEDYEEDLQFF
RQLIVKQKELLKYFKSMVEH
>gid:853852  dnaN  DNA polymerase III beta subunit
MKVLINKNELNKILKKLNNVIVSNNKMKPYHSYLLIEATEKEINFYANNE
YFSAKCTLAENIDVLEEGEVIVKGKIFSELINGIKEDIITIQEKDQTLLV
KTKKTNINLNTIDKKEFPRIRFNQNVDLKEFDELKIQHSLLTKGLKKIAH
AVSTFRESTRKFNGVNFNGSNGKQIFLEASDSYKLSVYEIKQKTDPFNFI
VETNLLSFINSFNPEGGDLISIFFRKEHKDDLSTELLIKLDNFLINYTSI
NESFPRVMQLFDFEPETKVTIQKNELKDALQRILTLAQNERFFLCDMQVT
NSHLKINSNVQNIGASLEEVTCLKFEGHKLNIAVNALSLLEHIDSFDTDE
IELYFQGSNKYFLISSNNEPELKEILVPSK
>gid:854553  dnaX  gamma-like
MRKVLYQKYRPTKFSDTVGQDSIKRIIVNAITQDQLPHGYIFAGERGTGK
TTFAKIIAKAINCLNWNGDVCNQCEACQAINSNSAIDVFEIDAASKNGIN
DIRELAENVFNLPFKFKKKVYILDEAHMLTPQSWSGLLKTLEEAPDYVLF
IFATTEFNKIPITILSRCQSFFFKQITNDLIQQRLAEVAAKESIKITTDA
LVKLADLAQGSLRDGLSLLDQISNFSESKTISLADVEKTFNLLDKEQKFG
FIEAVLSGDLKQSFHLIDNFESQGINFVHFLRELFALTVDLYGYVKTGQI
AVVKPSDQTMAAKLRFHPKQYALLVQAIEANTGYGPSQLSLSDQIKAIVI
HYNNAVSKEPHIPAYTPVVQTQSPAKEHVPSKTVEEAKPQLPAKEPVLYK
VIEEPKVSSFVKDPVASKLIEQPQTIVQPEAQQEITEVEQPTETSPAPAT
DLFGLAIKPEVVRKRGRRPLSVENTDFFQPAVKKLIQPVSKPAPIKLIEP
SDNNPVSIPIKLNRAVIAVSVYGHNDPKLVAHFQQLLDSFKREFTQAEKT
KDSSYLKQFSDKFTASDLSKVIKVLAASPFGLVLIFEDKEIATRLWKEAL
TEATAQATLLEIFQQNLFLSSFTLSEYETKVLAKVEQLTHKPQVLQLQQL
EQLSSTVVKKAQKTAAQEIADTFFKGLYEEK
>gid:854277  fpg  formamidopyrimidine-DNA glycosylase
MPELPEVATVITELKSCVLNKPVKQVKVHLDKVLKNTNVKQLNDALVNHS
FVDIKRRGKYIIFCLSNGLFLVSHLRMEGKYFFEAKGSQFDLNHVLVEFL
FQDGDQLNYHDTRQFGTFHLFNRYQFENARELNKLALDPLDQEFNHQAIF
NKGHKSNKKIKTFILDQTNISGIGNIYADEILFASKIHPETLAKNLNLSQ
YQLICQNATDILKKAVEMKGTTIGTFTFKKDHTGGYQHFLKIHGKKGKQC
QSCNTTIIKKKINGRGSYICEKCQIQR
>gid:853855  gyrA  DNA gyrase subunit A
MAKQQDQIDKIRQELAQSAIKNISLSSELERSFMEYAMSVIVARALPDAR
DGLKPVHRRVLYGAYTGGMHHDRPFKKSARIVGDVMSKFHPHGDMAIYDT
MSRMAQDFSLRYLLIDGHGNFGSIDGDRPAAQRYTEARLSKLAGELLRDI
DKDTVDFVANYDGEEQEPTVLPAAFPNLLANGSSGIAVGMSTSIPSHNLS
ELIQGLILLIDNPDCTINDLLGVIKGPDFPTGANIIYTKGIESYFETGKG
NVVIRSKVSIEQLPTRAALVVTEIPYMVNKTSLIEKIVELVKAEEITGIA
DIRDESSREGIRLVIEVKRDTVPEVLLNQLFKSTRLQVRFPVNMLALVKG
APKLLNMKQALTVYLEHQLDVLIRKTQFNLKKYQERFHILSGLLIAALNI
DEVIAIIKKSANNQVAMEALHERFGLDEIQARAVLDMRLRSLSVLEVNKL
QTEQQELKALIEFCQQVLADKQLQLKLIKEQLTKINEQFGDPRRSEILYG
ISEDIDDEDLITQENVVITMSTNGYLKRIGVDAYNLQHRGGVGVKGLTTY
TDDSISQLLVCSTHSDLLFFTDKGKVYRIRAHQIPPGFRTNKGIPAVNLI
KIDKDEKICALISVNDYQNGYFFFCTKNGTIKRTSLSEFANILSIGKRAI
LFKENDVLFSVIRTSGQDDIFIGSTAGFVVRFHEDTVRPLSRAAMGVLGI
NLNQCEFVNGLSTSSNGSLLLSVGQNGIGKLTSIDKYRLTKRNAKGVKTL
RVTAKTGPVVTTTTVFGNEDLLMISSAGKIVRISLEQLSEQRKNTSGVKL
IKLKEKERLETVTIFKKEEAIKTTTATETDDVGSKQITQ
>gid:853854  gyrB  DNA gyrase subunit B
MEDNNKTQAYDSSSIKILEGLEAVRKRPGMYIGSTGEEGLHHMIWEIIDN
SIDEAMGGFASTVKLTLKDNFVTIVEDDGRGIPVDIHPKTNRSTVETVFT
VLHAGGKFDNDSYKVSGGLHGVGASVVNALSSSFKVWVAREHQQYFLAFH
NGGEVIGDLVNEGKCDKEHGTKVEFVPDFTVMEKSDYKQTVIASRLQQLA
FLNKGIQIDFVDERRQNPQSFSWKYDGGLVQYIHHLNNEKEPLFEDIIFG
EKTDTVKSVSRDESYTIKVEVAFQYNKTYNQSIFSFCNNINTTEGGTHVE
GFRNALVKIINRFAVENKFLKETDEKITRDDICEGLTAIISIKHPNPQYE
GQTKKKLGNTEVRPLVNSIVSEIFERFMLENPQEANAIIRKTLLAQEARR
RSQEARELTRRKSPFDSGSLPGKLADCTTRDPSISELYIVEGDSAGGTAK
TGRDRYFQAILPLRGKILNVEKSHFEQIFNNVEISALVMAVGCGIKPDFE
LEKLRYNKIIIMTDADVDGAHIRTLLLTFFFRFMYPLVEQGNIYIAQPPL
YKVSYSNKDLYMQTDVQLEEWKQQHPNLKYNLQRYKGLGEMDAIQLWETT
MDPKVRTLLKVTVEDASIADKAFSLLMGDEVPPRREFIEQNARNVKNIDI
>gid:853858  holB  similar to DNA-polymerase subunits
MFNPTHALLIIQRRGSYLQPVLTEYLTRVVCEQQTGCQTCPSCLEILHGT
YNNFYSFDQANPFKREHALHLSEVLNRQSESNQKQLYLIKNLETLTATAM
NSLLRLIEEHPVNTYGVFTTKNENMILPTILSRVQKVVLKKATQLPFQVD
SKDQAILKSFFSVDEQLQALDNGSFTRLKTIITTLTNKKNTASTVHEAWV
LFKQLNQTETAQVLNFMVDYTKDLTKKDRLLNMVQNLVFNPPKAALFANL
INW
>gid:854246  lig  DNA ligase
MAKVAQIRAIVEQLKRYDYHYYVLDDPLVSDFEYDQLYKQLQALEQAHPE
LIQPDSPTQRVGGIVVEAFNKFPHQNPMLSLDNAFDTATIASFIANINNL
TGVQNRFVVEPKIDGVSISLTYENGLLTRALTRGDGLVGEDVLSNVKTIK
SIPLTIPFHKQVEIRGEIFVDKKTFAQINENLAKPFANARNLAAGTLRNL
NSEVSAKRKLKAFFYFVPNALTLGCRSQSAVLAQLKQWNFPVSKAVASFD
RPEALIEYLEQFDQTRDQLNFQVDGLVVKLDNFHFYDQLGFTSKFPRWAL
AYKFKPKFVQTKLRGVLVTVGRTGKINYTAQLDPVNLEGTVVSAATLHNF
DYIKEKDIRLNDTVIIYKAGEIIPKVLEVCLPLRTAANQPIPEQTHCPAC
QAPLVQYKDEVDQYCTNERCDQRNLEAINYFVSKTAMDIQGLSIQTISKL
YENNLVRSVVDLYHLKEHKAAVLALELKIGEVLFNKLISSIEQSKTKGMA
RLLTGLGIKHVGQVLAKSLTKHFENIDALQSASMETLLELPDVGPTVAES
LFNWFHNDNNLQLLAALKAVGVQMDALKSNTNFDTASIYFQKSFVITGSF
PISRDTIKNLLVNKYDCRFTNNVTSKVDFVLAGIKATPRKLEQAKALNIP
IINEPIWT
>gid:854471  mucB  UV protection protein MucB
MIGTFTYLDPTIQADPNLLFFYFDFDAFFASVEEIENPELKNQPLIVGNR
TSRSVVSTCNYLARSYGIKSGMPIAKALELCPQAIFATSHFRNYRKYSAK
IFAMIAEQFNLEVHTLSIDEGFVCFRDLSPRKAFSLAKRIQRHVYEQLNF
HISIGISNQFTLAKIFSNQAKPFGVKSCFSKEVKRKLWPLPIVELPGIGK
RQLDNAFKNNFHKIGDLAKCKDVTLFKRVFGIAWESLHAVALGETYTQSE
QDVKSRSIAVSETLEYLNYSSNQLQQKLTSIFNELYARLQLSFQMCKGVV
VQLKSNDFIVNSHSQSIKKYTADYQTLLVIVKKLFNRLLMGVGLNIRLIG
VSFFGLKNNPSSSRPEGLLFYEYQQAKPKQQTAHFALDQMIYEINQSFGY
EIIQRAKKLAAS
>gid:854230  mutB1  DNA helicase II (with Mycoplasma specific C-terminal domain)
MAFNISTQLNKEQRAAVTCGKGVNIVYSGAGTGKTTIISQRFAYLFNQKR
INPSNILALTYTRKAASEMKQRILELLPEKYHKDVNIYTFHSFCSRFLRE
EGQKNFVIDDDLSNFLKDFLKESELKSQKVLQIIDGFKNAYFDFDTNSLK
DDERLVELCEFHLDPQERNFQLFKETAIAAFVEYEKGKQQNNKIDFADLL
IKTCTLLSKDHKLLRKWSKKFQYILGDEFQDTNQIQYELIKMLASHHQNL
FLVGDNNQMIYRWRGAVSDIIDSLKSDFKVRPENEFYITQNYRCDQNILT
VANSILGTIYAKENQPDSTKGFLFSAIKSNRLPVYFQASSVEGQHSWIIN
KIKNLHKNHGIQYKDMAILFRTNRNMDSMTEALEADGSIPLKQNKGFFKQ
LETFKKVLVALITRSNYDIKLALKSLRVWPNVLNKSLTVNEQVNLDKILQ
NLEQAIFLDEHTRGELTEAAKVFTRLIKFVEEQQFEALLAFTFEALNTDQ
FVCNFIFRTLQKLQTENKNFTITDFINELRFQQDELKQSKDNVINLITVH
SAKGLEFEAVFIYGINQDNFPLKSKNQIIDLQRELDELRLFYVALTRAKK
YLFLLSVYQMSGEIIYPSKFIRFINKEDRLEIATINHKVHQDDEFFDSSK
TEDYQKKYLTENTDFVNGDSVSHRTYGKGVVVEVREDAVCVAFKNSKYGQ
RWIVKNHRDLVKAVY
>gid:854217  nfo  endonuclease IV
MPKLLGSFISFKSPHYLVGSVRDAVSIKAQAFMIFLGAPHTALRVDPNRM
QIDEGHTLMEQHNLSKSGMVVHAPYIINCASKDPVKQTFAIDVLTREVKL
CHAVGAKLIVLHPGSAVEQTQTQALDHLIKVLNTVIANTKEVIICLETMA
GKGNEIGRDLDQLKYVINHIEQQERIGVCLDTCHFHDSGNDFNNTAEIME
TIDTKLGFEFLKVIHLNESKNVCGSKKDRHANLGEGMIGFDNLMRFIAQP
QIKQIPIVLETPSDKHNYPAVYGAEIERIRAWFGAR
>gid:854360  orf7  conserved hypothetical protein
MGCGACCILWVQSFTMTVVYGADIGLIHQQLNQLLNPAACKQVWFQDVNK
LYDVVLNQNLFAEDTKPILIHNCSFLEKNNLTKAELHCLKTLKDTDVVVT
IYSDSPANALINDRAITKYACKPVTAKTIHQVISKAAKTLKLNLNPDLID
HLATILPFNLGVIEQELRKLTLLSPAELQDKKMLEAVLCDYQTSQILQLT
DAMVRLQTAKALKLIERLFLPKQLTPPQFLEFLANELLLALMVKGVKPQA
VFQLQWNVNPFRLKAIQSQYRFWSTNQLTALINAIWQLDIKIKRNDGLAI
HLLKHFVLRFFAQK
>gid:853987  parB  topoisomerase IV subunit B
MKNNYSEANIKILKGLDAVKKRPGMYIGSTDSRGFHHLLWEILDNCVDEV
LSGFANTIAVVLHAENQITVSDNGRGIPFETHSDSKISTIDTVFTYLHAG
GKFDNDSYKIAGGLHGVGASVVNALSDQLQVTVKRQGKVYRSVYENGGKI
KQKAHCIGNAKIDEHGTSVTFRPDPKVFKKIHFDSELIRARLKELAFLFK
KLQLTFVDETGSGEKEVFFTEAGISQYLDELNADSKQIAQKIFVSGTEDD
IELEAVFQFIDGEDEKLLSFANSIRTSEGGSHEASFRQSVGDVINNYCRK
YNFLKERDKNFEASEIREGLNGIIKVNLPEKIIAFEGQTKSKLFSKEVKA
VVQKLTQKHFFQFLERNSVDAKLIVEKLFYNRKLRQELKQQRQIKKNLSN
PKAERILFGKLAPAQSKKVAERELFVVEGDSAGGTAKMGRDRFLQAILPL
RGKVLNVEKINNKKEAINNEELLTLIFCIGTGIGNNFTIRDRKYDKIIIM
TDADNDGAHIQILLLTFFYRYMKPLIEKGHIYLALPPLYKFEGRDKKARY
LWTEQELEQYRAKHSHFNVQRYKGLGEMNADQLWETTMNPMTRKLIQVKL
DNFIQAEKQINVFMGDKTELRKSWIEANINFSSEN
>gid:853988  parC  topoisomerase IV subunit A
MEKNKQALLLQAIEDVFAFSFSKYAKYIIQDRALPDLRDGLKPVQRRILY
GMYQMGLKPTSPYKKSARAVGEIMGKYHPHGDASIYDAIVRMSQAWKNNL
TTISIHGNNGSIDGDNAAAMRYTEARLSPYGFELLKDIEKQLVPFVNNFD
DSEVEPSVLPTLLPNLFINGTSGIAAGYATNIAPHNVGELLDGLSYRIEN
PDCDLKAILKIVKGPDFPTGGLVYFEQELANIYQTGKGKFVIQAKYETNT
AFGQNQIVITEIPYETVKANIVKQIEELISDNKLSALESVIDSSDRSGIR
IIINHKDFLSADKIMAFLFKHTQLQVNFNLNNTVIANRCPVRVGLLAYFD
QFLAFAHELIINSAKYDLALANKRLEIIKGLIKAVSMIDEIIRLIRRATD
KQDAKTKLIDKYAFTLNQAEAIVSLRLYQLTNTDIKVLFAEQKELEQTIQ
TAERLIAKPQARNQLLQAQFFQYKKQFNQPRRAQIVGLIEKQKVQDSDFI
EHKEVGLLISHDGIYFKFEPEQLAKHLVEFKSEQDQLIFGGVVQNSDYFF
MVTSLGNIITVPIYKTLSNTKTKMNELLAKKPILMEDEKLVLAGIVNPDK
MEQQLLVLTSQCGMVKRVELSKVINTKQIKSSCCMALRERDKLVNAFVQT
KGEPKLVCLVSSSNSFATFLAEEIPIISNKGIGVKGIKLKAEEKVRFAMP
LQDNDALVVINSDGGVYNFEVVELAVASRMSVGKKLIPKTKTPVSCFAAN
KHSEIIGHRGKNGSDLFTLNELNRLPKSTVSQMRLFKWS
>gid:854229  pcrA  DNA helicase II
MEHLNQEQKAAVTCDNGVNVVYSGAGTGKTTVIAERFAYLVNEKGVNPQS
ILAFTFTDKAASEMRQRIIKLIPQKSLQDLHIYTFHSFANRFLQKHGKSD
FAILSDSNRFFSDYEMGDQLQTVVEIYKNKVVDLELDNLEYNSAFRDACT
DTFNEDFSTISNGQFRKRAATALRAYQNYLITNNLFDFSDLIIETCHLLK
GNSELLQAFTESVHYILVDEFQDTNLAQYELVKLLATTHPNLFLVGDSNQ
MIYGWRGAVVEIFELLKNDFQAVKEFYTTQNYRSIQAVLAVANDVLTAIA
RKERKALVLLHSSIDSKAVPVHYKANSLKNQDQWIIYQMKQLHLNNGVPY
DQMAVLFRKNKHLDAFSQTVLEDGDLPLAKLNLLTIHAAKGLEFEAVFVY
GLVERAFPSLHWDGSDKHKLLEEMKLFYVAITRAKQFLFLVSVSVESFNA
YYEPSRFLKLIEKEHLQTQKAAYFKEQLKTQPKPVNLYTETENAENLQKA
TDSKKWIILGAILLIIVIITAVLKLFVEN
>gid:854276  polA  5'-3' exonuclease (complete)
MKNAILIDGNSLAYRAYFATWQQVEFAKLHNLPFNNAIRTMLMMCWNLLQ
SKQYDYGVISFDTKAPTFRDQLYSEYKSKRSKTPSELLVQIPVVKESLRH
LGFLVCEQDGFEADDLIGSYARLMTQNNVAVDIYSSDRDLLQLVDSMTSV
WLCVKGTKEMKEYNTDNFAEQFFGLTPKQVIEYKGLVGDNSDNLTGIKGI
GPKKGIDLLKQYGTIDNIFANFDKLSKALQTILQGQIDTAKKFSFLASIK
TDIKLNDDIVHAALKPIDKQALLELLDKYGIKALAQKFSQL
>gid:853887  polC  DNA polymerase III (dnaE) alpha chain
MVFDTETEKGKRIWALSQFLVKKNILDHNELHQLNNRIELVYLENDRENA
LFLVALTLKKPLTIDIWNALYEGFQDAEGAELRITFQEDATFFKDGSTKS
SVTLAIIKDYFKSFFGKDKKYRILLEQELTHPNFLSYSNHELKANCQSQE
LDQWLIEQRQAFIKWMHQAGFTHFGFVSLFNPPAEKQLKVKSMKVSKYDK
QFETEVFSTEFVPIHKINQQMDEIKLMGQIFELKDFPGYNNLRNTLNIYV
TDFQLGGSLILKWFYKDPKTIEGIKIGTWVKATVKVERDAKTQLLQGIIK
EISPIETPAYYRRPDQDKQKRVELVFHTKMSAFDGINSVQEYAQFAKERD
WKTIAVTDKDNIHIYPTLYEVAKKYGLKAIYGLECNLIDDHIKIVSNPDK
TKLKDATFVIFDIETTGLHGRYDSVIEFAGIKVKHNREVERMQFFLKIDG
PLPAAVTEITKITQAQLEDGMEQQAGLEKLRAWLDGCVMVAHNGLSFDLP
FLQTQFEKYNIAPLTNPLIDTLALSWALNPGFASHTLSNICAKLKFDFDD
ERLHRADYDTQALKKVFDYFKEQVELMGITNLEQLDQELNQQCHFELLKR
TFTNTGIIYIKSQSGFAKLYELLSIALTDNNATRPLVLTSTLQKFAKSFV
ITDNPVQGDIFKAALTKPLKELEAAIKRVDFVLIAPPGAYAGYTIREGLK
KEAIPNAIKLVVDTAQRLNKLVAVASDAYFIHPWENEYYKAIVCAKGLGG
RWHRHFNYKEREQRVPNVFVRTTGEMLNEMSFLGEQLAYELVVENTNKLA
KQLTADDLVPVQTKLQPPVIEGSNENLAAKTWSQAKAIYGDPLPKLIEQR
IQEELKAIIDNGFGIIYWISHLLVKQSVQDGYFVGPRGSIGSSLVANLIG
ISEINPLVPHYLCESCQYFEVNEEVDDGYDLMVRDCPKCGAKAAFKGDGH
NIPFATFMGFAGDKIPDIDLNFSSEYQAKAHAYVRELFGEQYTFRAGTIA
TVAEKTAYGYARNYFEIIKQTELATAPEIERFKQKLVGIKRTTGQHPGGI
MIFPNHKSVYEFTPCGYPADDTSSDWKTTHFEYDALGNTILKLDILGQDD
PTMLKHLGDLTHVNPQNIPRFDKKLTEMFWSVNPLKLKPHYLDEPTGAIG
IPEFGTKFVRKILEQTKPKGFGDLIRVSGLSHGKNVWADNAQKILKDQNL
SLKDVIACRDDIMLYLIHKGMQAKDAFEIMEKVRKGIALNAKEVQLMQSN
GVEQHWINSCLKISYLFPKAHAAAYVLMAWRIAWFKLYHPLSYYACLLSF
KLKEHDVSGFKSGVSFVKQKLEELNTLYRIKRIKPKEAELLTSYEVYLEM
MARGIKLEQISLTHSHATRFVEHNGMLIAPFITIPGMGEAVANSIIEARN
EKPFSSLDDFKKRTKITKKHIEAFTQMQLLDEFREQDNQKKLF
>gid:854416  recA  
MVQKEMINKKISQDNSFIQNNNLADFDFLDAKKNSEIKTVSTGSLHLDEA
LGTGGLPLGRIVELYGNESSGKTTVALHAVASFQKAGKVACYIDAEGALD
LSYAKAIGIDLGKLLVAHPKHGENAFALMESLIKTNKVALIVVDSVAALI
PKQELEGNMDDQTIGLHARMMSKGLRRVQSLLPESDTCLLFINQLREKPG
VMFGNGEVTTGGRALKFYASMRMEAKRSELLKDRFGNYVGIKSKLTVSKN
KVARPFGVAFLEIMFNRGIVYEHEVIELALKHNVVVRSDNAYSFKSQNIA
IGKEKLFSVLAEKPELFEQIKQLTIKQIHSPPPPAS
>gid:854469  ruvA  Holliday junction DNA helicase RuvA
MIASIFGKITFVGKRKIIVEANCISYWFNVKENHSFEKNLEKPRQVFCQI
IKRMVTNQILEEGFAFNTLEEKEWFSKFIELNGIGSKTALNLLNNNLEEM
RDYIKNSNYHALTKLTGSNSKVARALLALELYDRDDGGKRIKPNTAMAND
YDEMFDTLKSLGYKPQDIQNALSKIEIKPNFDVSEVIAEVIKLMSFQNNE
VTNKTA
>gid:854470  ruvB  Holliday junction DNA helicase RuvB
MKLQIKPPNNFAEFVGKQEIINQIQLSIKASRINKAQLDHILLYGPPGVG
KTTLARLIASEMNTKLQIIQGGHLQRPSDFLNAVSLIKKGDVLFVDEIHA
VAPSVMELMFPVMDDFRVQVLIGKDFNSKMVEMKVNPFTWIGATTQFGKI
INPLEDRFGMILNIDYYSNQEIERIVSIYGEQMELELKPEEITQITQHSK
QTPRIAIRIVKRLFEQKIVNKKIDLAALFKSLMIYKNGLQSIDVQYLKAL
NGQYEPQGIKSICSMLGIDKSTVENKIEPFLLRENMIQKTKKGRIITRTG
RNYLTSC
>gid:854107  ssb  single-stranded DNA binding protein
MNRVFLFGKLSFDPNKLQTRTNNIGASFSLACIDSSGFNDSKSYIRITAW
GKVASFVLTLKPGDSVFVEGRLSTYKMNNRSDDPNSKATYALQVIADKVY
RPDEENSLEQPVDKATVIDSPFLAAKTNATENELAQAFPISLDDEDDDIN
PILNNDSQLEEESDDE
>gid:854139  topA  DNA topoisomerase I
MSKNLVVIESPNKVKTLQKYLPNDFEIVSTIGHIREMVHKNFGFNEADYS
PVWEDWTKSKKKFSSLSFKGNLKGKKLLSKYDIIKSIKEKASKATNIYLA
TDPDREGEAISWHVYDVLDEKDKSKCQRITFNEITKNAVLDALKNPREID
QSWVQSQFARQILDRMIGFRLSRLLNNYLSAKSAGRVQSVALRFLEEREQ
EIRSFVPRFWWTLDVLLNPKAEGVREACANRSIPIVLREINPALRAGLKF
EEEKSVSGIDFLDEASAKKFGEQLKGVFEVYNIDETKHYSSSPNSAYTTA
SLQKDAINKLGWSSKKVTLIAQHLYEGVSINGEQTALISYPRTDSTRLSA
QFQQSCKEYILNHYGEKYLSNRIVSAKGKKGEKIIQDAHEAIHPTDINIT
PEMVKNAIKKDEFLLYRLIWIRTVASLMADCKKSHTHIRFINDGNKFYAS
SKSLVFDGYRKIYEHFENKESNDLYIDLDKIRVGDRFMAKDIKITARQTH
PAARYTQASLIEALEKSNIGRPSTYNTMASVNLDRGYASLNKHAFHVTQL
GEQVNEELSKHFGKIINKEFTKNMEKSLDEIAENKKNYQEFLRDFWSNFK
EEVKLAEGSIQRVKKEKEFVGRDCPSCASPLLYRYTKRGNEKFVGCSNFP
NCKYNEFSQNKPNLTLEKLEELCPECNSQLVKRRTKFNPNKTFVGCSNFP
RCRYIKKDNAS
>gid:854113  ung  uracil DNA glycosylase
MEQLLDQFLSGVLSEWKAFILQEAKQTYFQELLAKLKNVEQELTPKASQV
FRPFSFFAPNNTKLIIYGQDPYPNPQHACGLSFASNAPKLPQSLKRMILR
LQQEYPELAGQNHWTKQLLEGWAQQGILLLNGVFTTNAFQTNAHRNWGWE
QFNCHLLDFLLSQKLYVLLVFLGKQTENFVLKKIGGASQFASLSYPHPSP
LTGRKFFDHPDALFKQINQWLKHHNHTPIDWTNGQVQYQF
>gid:854554  uvrA  excinuclease ABC subunit A
MKPELKTNDFIRVKGARENNLKNVNIDIPKNQFVVITGLSGSGKSSLAFN
TIYAEGRRRYLESLSSYARQFLGNSDKPDVDSIEGLSPAISIDQKTTSHN
PRSTVGTVTEIYDYLRLLWARIGIPFCPNGHGAIQTQTVNQIANQIFNLP
VKSRIQILAPTIKNQRGTFANEFAKYQQLGFLRVWVDGQVYTLDEEIKLD
KNTKHNLSVVVDRIVINQDKQTLGRIVDAIEGVIKLTEGRIEVLLEDGKI
LSFNKNHGCDQCGFSISELEPRLFSFNSPLGSCEYCKGLGFSYEPDVEKI
IPNPLLSINEGGIDIFKNIVHGTSLDWQRFLSLINHYQIPLDQPLGQMDT
DLVRMILEGSDEPIEIKTVSNSGAKNVRFEHYEGVAHLIKRRHLETSSQA
SREWYSAYMSEITCKKCQGKKLTTNSLSVKLGGLDIISFTELSIDKAIEF
LLQIELNQEQKKIGELALKEIINRLSFLKNVGLEYLNLARRASTLSGGEA
QRIRLATQIGSQLTGVLYVLDEPSIGLHQKDNDRLINTMMVMRDLGNTLL
VVEHDSETMLAADYLIDIGPKAGNQGGEVVAAGTPLEVMENPDSLTGQYL
SGKKQIEVPKTRHAGNGRTLTLKGAKGNNLKNINVTIPLNKLVLVTGVSG
SGKSTLINQTLVPILERLVNYKNVKPAPYKEIIGVNHIDKVVVVSQDPIG
RTPRSNPATYVSVFDDIRELFANTKEAKARGYTNSRFSFNVAGGRCDKCF
GDGVIRIEMHFLPDVYVTCEMCDGKKYNPQTLEVKYLGKSIFDVLQMSCQ
EAYDFFKAIPNIARKLKLLCDVGLEYLQLGLNVTFLSGGEAQRIKLAKFL
QKKATGKTLYVLDEPSTGLHIEDINKLLTVIQRIIKNGDSVIIIEHNLDI
IKMADYIIDLGPEGGEKGGQIIAQGTPEQLLNQVDKSYTAQYLAKILK
>gid:854089  uvrB  excinuclease ABC subunit B
MKSPTKDSKLFHLKSNFAPTGDQPAAIAKLAEFQTNEQVLLGATGTGKTF
TIANVIQKVQLPTVVIAHNKTLAGQLYQELKELFPNNAVEYFISYFDFYQ
PEAYLPAKGVYIEKSATVNEEIKRLRVSTLHSLSTRKDVIVVGSVASIYP
TSSPADFAQYSLWLVVGKEYGLSELKTQLIHLNYVVNKQQLTPGKFRFQG
DVVEVFPGYAQDYVLRLSFFDQQLEQIARIDPLTNKVLETLNSFKLGPAD
EYIVNQNDLGVALDTIKAELKDRLKYFERLNFPERAQRLQTITEHDLADL
KAWGVCSGVENYARHLEHRPPHSKPYNIFDYFTKGEWLLVVDESHQTLPQ
IKGMYNTDISRKQSLIEYGFRLPSALDNRPLSYEEFRQGINKVIYVSATP
REEEIQLSHNNVVEQLVRPTYLLDPEVIVKPKDNQVEDLVSEIINQRKHN
GRTFVTVLTIKMAENLTDFLKERNIKVAYIHKDIKALERLILLTDLRKGE
YECLVGINLLREGLDVPEVSLVAIFDADIPGLPRDERSLIQIIGRAARNV
HGRVIMYANTISEQMDKAIKETQRRRTIQMAYNEQHHKTPMTVQKPITLN
QPIKLKTKSSEQQKAALIKQLTKEMKQAAANQNYELAIEIRDSIFELEKQ
FRGKIKS
>gid:853990  uvrC  excinuclease ABC subunit C
MIIVNNTLAFKLKNAPHKPGCYLWKDDAGQVLYVGKAKDIFKRVHHYFNP
NRSFKTRALVERIADVEYVILKNENDALNLEAKLIKQYKPRFNLVLKENN
GYLYFFITASVKPTLELGRRYEFSKNKYFGPFASSKFRLRDIYDLLLKLF
PLRKCAPHERGHPCFYYQLKMCMGQCMGEDTPERYQTTVKGIEQFFNHGP
EQVLNHLQQQEIKASEQQNFEAARHFLDLQKAVLELVNMQQTAFIKAKQS
HDFIGYVFEKNVLAITVFAYVDNQLIGKNQQVFELPQDDEKEVESALVTF
IYHYYSTNKIPKTLTVSLSEENLSLLANSLKINVTQPKNGEQKSILQTVI
DNARYALNTKWTGFINNLNRAEVHQQLAQLLQVPSIQSLEIIDISFYDKD
HVVGAMLRYENGKRMKALSRRYNINIDHKGDTNYMADVVYRRIISSIQTH
KQLPLSDLLIVDGGIAQINTVTKVFASFPNVTQPIIIGLAKNTRHQTDHI
VLTDNTTINIDKNTPLFAYLTTIQEEVDSFAKHNAFKRVSRARFQNPLLQ
IEGVGRKTVQILLDNFQTNAKHWSCFFERIITVYSC
>gid:853860  yabD  hydrolase
MEYFDAHCHLNCEPLLEQHEKSLANFRLIGLKANVVGTNLTNSQIAVNLA
KQHPDLLKAGVGIHPNDVQLFDLKAAQATLKKLVSTHRSFISCIGEYGFD
YHYTKDYITQQEQFFLMQFQLAEQYQLVHMLHVRDVHERIYEVLKRLKPK
QPVVFHCFSEDTNTALKLLTLREVGLKVYFSIPGIVTFKNAKNLQAALSV
IPTELLLSETDSPYLAPVPFRGKTNWPECVVHTVQTIADIKQVPLAEIKQ
AIVHNAKKLFW
>gid:853926  yabF  similar to nucelotidyl transferase/polynicleotide cleavage
MDKKTRLKLDGVIVCEGKTDQARLQQLFDVSVITTNGSALNQRTINLIKA
VAKKQPVILFLDPDVAGQKIRRQLEQHLDKYESCFIARKDMKPNSTKIGV
AEATDAALIQALQQRQVFTKTTQPTLSWEQYLELNLNSKSKRLALCNKLH
LSYFNHKQLFRKLNLLQLTFDQVCQLLK
>gid:853873  yb95  similar to helicases
MTIAEIRKFAQTTQKFVEAENLFEHGNVVLPKKYLNKARGMAEVLYNSQV
IKVSFTAKDGELTCKCSCLANVDNCVHIVAVLLKYHQMLVESKRSFNLAE
AFHLDCDQAEMLIENLSLEIIAGGWNFKLGFTINLDKHNPQPSVLRFYCC
DATFVYFLHLENDTLHSVELSKFKPEERATLLFFDKLCKQFTVGYDRNSL
LFPLAGFLKELQANTEPTIFVFNDDKIDNILFLRISKKHHGLNHVCGFSG
KKVFDFVTYKQKEKQIVLRSAYLSKFTDFKFPYTINIYKLQFGEPLFFYF
LIQLKRDGFKNFYFQSEDSIVKEKEYLPKLYFKVEYDPVKNKFVSDAFFK
YKNHFNKGTTTVYPHRYYMAKKSDRGGFNRLLFYEEAVENFYQDQFDLGY
FRKFEHLPIQDKNQIEAFKAALDDLMPVDLAEVSLSDNLLHQKPLHFALS
DLEAVAVDDKQIKLSFAPSAVELKLIKRILSAYHKGNVVCIDQESWYDLK
QPAAKELIQFWNQFDLRNATSDGNHIYLPKYYLFEVAKIFSQYLDIKNLF
DVPTIKKIEDQNNNVFDLSLEHKKITSLRNYQQEGVKWIRGLEENKFGGI
LADEMGLGKTVQVIFALLDSYLKNHVNLPSLIIVPASLLLNWKSEFEKFA
PQIKVKVANIPSKERGELYEKLTNEILIVSFNVLRSDVKLITKQRFHYVV
IDEAQGIKNDSSSITKAAKKVKGNFCLALTGTPIENRLLDLWSCFDFVLP
SFLGNKKQFTDQFEKEKTDQSFHLLMQRTSPFILRRTKSKVLKELPNKIT
TDIYVELNPMHQKLYEEERDRGLEEIKQIQDKSSFNILTLILKLRHLCSL
PKNSQGILENSAKKEAALEIIHEAIENQRKIILFTQFIDVIDHFKDTFKE
QGIEYFIFDGRKSPKSRHSIIEKFNNAKNPCVLLASLKAGGVGINLTAAE
VVIHFDVWWNTAVENQATDRAHRIGQKKTVQVYRIIAKNTIEERVCQVQA
EKQELVSKTLVEDVNFFESLTNEELLRLFE