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# Haemophilus influenzae Rd KW20

>gid:851568  HI0011  DNA polymerase III, psi subunit (holD)
MNRRDLLLQEMGISQWELYRPEVLQGSVGISVAENIRLITVSDENISSSP
LLADVLLSLNLKKENCLCLNYDQIQHMECKQPIRYWLLSENSDQIDRTLP
FCKQAEQVYRSPSWQQFQSNHQAKRALWQQIQQP
>gid:851575  HI0018  uracil DNA glycosylase (ung)
MKNWTDVIGTEKAQPYFQHTLQQVHLARASGKTIYPPQEDVFNAFKYTAF
EDVKVVILGQDPYHGPNQAHGLAFSVKPEVAIPPSLLNIYKELTQDISGF
QMPSNGYLVKWAEQGVLLLNTVLTVERGMAHSHANLGWERFTDKVIAVLN
EHREKLVFLLWGSHAQKKGQMIDRTRHLVLTAPHPSPLSAHRGFFGCRHF
SKTNSYLESHGIKPIDWQI
>gid:851598  HI0041  exodeoxyribonuclease III (xthA)
MKFISFNINGLRARPHQLEAIIEKYQPDVIGLQEIKVADEAFPYEITENL
GYHVFHHGQKGHYGVALLTKQEPKVIRRGFPTDNEDAQKRIIMADLETEF
GLLTVINGYFPQGESRAHETKFPAKEKFYADLQQYLEKEHDKSNPILIMG
DMNISPSDLDIGIGDENRKRWLRTGKCSFLPEERAWYQRLYDYGLEDSFR
KLNPTANDKFSWFDYRSKGFDDNRGLRIDHILVSQKLAERCVDVGIALDI
RAMEKPSDHAPIWAEFK
>gid:851614  HI0057  excinuclease ABC, subunit C (uvrC)
MFDAKKFLTDVSHEPGVYRMYDDKDQVIYVGKAKDLKKRLSSYFRKNLSS
KKTEALVASIHHIDTTLTSSETEALLLEHNFIKLYQPRYNVLLRDDKSYP
FILLTKERHQRITSYRGSKKFAGEYFGPYPHAGAVRETLSLLQKLFPVRQ
CENSVYSNRSRPCLQYQIGRCSAPCVQGYVSDEEYNQQVELARLFLQGKD
QQVLDYLIGKMEQASRNLDFEQAARYRDQIQAVRSVIEKQFVSNERLDDM
DIMSIAYQHGLACVQVMFIRQGKVLGNRSYFPKVPANTDLSELTETFVGQ
FYLQGHQGRSIPNSIIVDRQLAEKSELEQLLSEQAGRKVTIQESVKGDKS
KYLQLAQVNAKAALNVQLKQSSRMSERYQALCDLLNLPKIKRMECFDISH
TMGNQTVASCVVFNKEGPLKSDYRRFNIEGITGGDDYAAMEQVLQKRYER
DLEEDKIPDIIFIDGGKGQLNRALNVFQHLQVKWDKNRPHLIGVAKGVDR
RAGQEVLIISKQDREIHLPDDSLALHLIQHIRDESHNHAISGHRKKRQKA
FTQSGLETIEGVGAKRRQALLKYLGGLQGVKKATLDEIASVPGISPKLAE
RIFETLKND
>gid:851624  HI0067  DNA mismatch repair protein (mutL)
MPIKILSPQLANQIAAGEVVERPASVVKELVENSLDAGANKIQIDIENGG
ANLIRIRDNGCGIPKEELSLALARHATSKIADLDDLEAILSLGFRGEALA
SISSVSRLTLTSRTEEQTEAWQVYAQGRDMETTIKPASHPVGTTVEVANL
FFNTPARRKFLRTDKTEFSHIDEVIRRIALTKFNTAFTLTHNGKIIRQYR
PAEAINQQLKRVAAICGDDFVKNALRIEWKHDDLHLSGWVATPNFSRTQN
DLSYCYINGRMVRDKVISHAIRQAYAQYLPTDAYPAFVLFIDLNPHDVDV
NVHPTKHEVRFHQQRLIHDFIYEGISHALNNQEQINWHTDQSAVENHEEN
TVREPQPNYSIRPNRATAGQNSFAPQYHEKPQQNQPHFSNTPMFPNHVST
GYRDYRSDAPSKTEQRLYAELLRTLPPTAQKDISDTAQQNISDTAKIIST
EIIECSSHLRALSLIENRALLLQQNQDFFLLSLEKLQRLQWQLALKQIQI
EQQALLIPIVFRLTESQFQAWQQYSDDFKKIGFEFIENQAQLRLTLNKVP
SALRTQNLQKCVMAMLTRDENSSSFLTALCAQLECKTFNALADALNLLSE
TERLLTQTNRTAFTQLLKPVNWQPLLDEI
>gid:851627  HI0070  DNA repair protein (recN)
MLTQLTINNFAIVRQLDIELAKGMSVITGETGAGKSIAIDALGLCFGQRV
ETSMVREGQERAEICATFQLESQNPAYHWLSEQELQDPDNPTECILRRII
NADGRSKAFINSTPVSASQLKEIAQYLVHINGQHASQLLLKNDYQLQLVD
NFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQLLQYQVDEL
DEFNLRPNEYLELEDEQRRLSSSEQLTQLSQSALQILSENDTVNIDSLLY
RATQYIDELAELDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQL
LQEIEQRISQTLQLARKHQVKPEDLVEQHKKLKAELTALLDFSESEEMLI
EQEKRAFEQMQATATALTASRQQSATRLAQNVTQSIKQLAMENAEFYVEL
NTDLDKVSANGADNVIFTLRSNLGQQPQPLAKIASGGELSRISLAIQVLT
SDQSAIPTLIFDEVDVGISGKTASVVGKLLRQLSERCQVLCVTHLPQVAC
HGHHQFNVEKFTVDNKTETKMTALSQAERVPALARLLGGSEITELALANA
QEMLDLVH
>gid:851638  HI0081  conserved hypothetical protein
MHFFDTHTHLNYLQQFTGEPLSQLIDNAKQADVQKILVVAVKEADFKTIQ
NMTALFPDNLCYGLGLHPLYIQEHAENDLILLEQALKNRDTNCTAVAEIG
LERAIPDLLTDELWAKQCHFFESQLYLAKQFNLPVNIHSRKTHDQIFTFL
KRIPLSKLGVVHGFSGSYDQAKRFVDLGYKIGVGGTITYERANKTRQAIA
KLPLDALVLETDSPDMPVFGFQGQPNRPERIVESFKALCTLRNEPAELIK
KLTWENACQIFS
>gid:851670  HI0112  H. influenzae predicted coding region HI0112
MIKARYFYLYKLIVRCRFFIAKYNTLFKQQVIEFYIQNGKNYSLISKHFQ
LDSRTLRHWINQFNHSRINGLAVLGKTRNYSLKFKLNVIQTVKNGQFL
>gid:851700  HI0137  DNA polymerase III, epsilon subunit (dnaQ)
MINPNRQIVLDTETTGMNQLGAHYEGHCIIEIGAVELINRRYTGNNXHIY
IKPDRPXDPDAIKVHGITDEMLADKPEFKEVAQDFLDYINGAELLIHNAP
FDVGFMDYEFRKLNLNVKTDDICLVTDTLQMARQMYPGKRNNLDALCDRL
GIDNSKRTLHGALLDAEILADVYLMMTGGQTNLFDEEESVESGVIRVMQE
KTAEEIKSAVDFSHNLKLLQPTNDELQAHLEFLKMMNKKSGNNCLWDKRF
GNNNVH
>gid:851701  HI0138  ribonuclease H (rnh)
MPKQIEIFTDGSCLGNPGAGGIGAVLRYKQHEKTLSKGYFQTTNNRMELR
AVIEALNTLKEPCLITLYSDSQYMKNGITKWIFNWKKNNWKASSGKPVKN
QDLWIALDESIQRHKINWQWVKGHAGHRENEICDELAKKGAENPTLEDMG
YIEE
>gid:851755  HI0192  seqA protein (seqA)
MKIIEVDEELYQYIASQTRSIGESASDILRRLLSLPVHTSIVNDLIITSA
ETDQKPKQAINVKEVNIKTTKKQSITAINQIVEKVQTLLNSTEFQEESKA
VVRFLAILRVLYRTNPESFAQATESLQGRTRVYFARDEATLLMAGNHTKP
KQIPDTPYWVITNTNSGRKMLMLEGAMQSMELPETLIDEVRSYFTVN
>gid:851771  HI0209  DNA adenine methylase (dam)
MLRPKKQSLKPKLKHRPFLKWAGGKFRLTDEINKAFPNKKNCLIEPFVGA
GAVFLNSNFERYILADINPDLINLFNIVKXNVDGYIEDCKPIFFADDANT
PDYYYAKRRQFNASTEPFERSIIFLYLNRFGFNGLCRYNSKNEFNVPFGA
YKTHYFPEDELRYFAHKAQSAVFLCCDFQKTFEFADKDSVIYCDPPYAPL
QQETNFTGYAGNEFGLAQQRALADLAKSIQKEKQISILISNHDTKFTREI
YNGAKFKRVKVQRSISQNPEKRVKVKELIAIFGARK
>gid:851780  HI0217  conserved hypothetical protein
MSNYRRDFTKGGLYFFTIVLQDRTKSYLTDYINEFRSAYKQTCEHYPFET
VAICILPDHIHLLMQLPENDDNYAIRIAYLKTQFTRQLPKECRQFNKNRQ
KYRESGIWQRRFWEHLIRDDKDLANHLDYIYYNPVKHGYVEVVKDWPYSS
FHRDVKAEIYPEDWGGNPDLKIKGDI
>gid:851784  HI0220.2  H. influenzae predicted coding region HI0220.2
MIFHIFQIDFIYSFLISFIMLKNLDEITSSIIADPQNKDFTERGIFPLFS
APKTARINIVGQAPGLKAEQSRLYWNDKSGDRLREWLGVDYDYFYNSGIF
AVLPMDFYYPGYGKSGDLPPRQGFAERWHPMILGNLPNIQLTILIGQYAQ
KYYLPENKDNVTNTVKNYRQFLPHFMPLVHPSPRNQLWVTKNPWFEEQVI
PELQILVKQIINKD
>gid:851800  HI0231  ATP-dependent RNA helicase (deaD)
MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQ
TGSGKTAAFALPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYA
QGTRIVTLYGGQRYDIQLRALKQGAQVVVGTPGRILDHIRRGTLNLSELR
FIVLDEADEMLRMGFIDDVETVMAELPENHQTALFSATMPEPIRRITKRF
MNDPQEVKIKVNNENAPDIDQSCWYVHGVRKNEALLRFLEVEDFDAAIIF
ARTKTGTLDITELLEKNGFRSAALNGDMTQQLREQTLDRLRNGSLDIVVA
TDVAARGIDIERISLVVNYDIPLDAESYVHRIGRTGRAGRSGRALLFVEP
RERRLLRNIEHLMKKGINEVELPNHLVLQECRRKKFVAKITKQLEHHDLE
QYRSLLEDLFTADQDQENIAAAMLMLLQGKQKLILPPDPPMEKRRRERND
RGDRRENPRSAERRGERKGYGNPQPMDLYRIEVGRADGVEVRHIVGAIAN
EGDINSRYIGHIKLYDDYTTVELPQGMPKELLQQFAKTRVLNKQMQMSFL
GAVKSDNSRGSDDFNGKRKGRGGDFRGERGRERGNDNRGNRKFNEKSNRT
FSDKPRRDRRSSF
>gid:851816  HI0249  excinuclease ABC, subunit A (uvrA)
MENIDIRGARTHNLKNINLTIPRNKLVVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLSLMEKPDVDSIEGLSPAISIEQKSTSHNPRSTVGT
ITEIYDYLRLLFARVGEPRCPDHNVPLTAQTISQMVDKVLSLPEDSKMML
LAPVVKNRKGEHVKILENIAAQGYIRARIDGEICDLSDPPKLALQKKHTI
EVVVDRFKVRSDLATRLAESFETALELSGGTAIVAEMDNPKAEELVFSAN
FACPHCGYSVPELEPRLFSFNNPAGACPTCDGLGVQQYFDEDRVVQNPTI
SLAGGAVKGWDRRNFYYYQMLTSLAKHYHFDVEAPYESLPKKIQHIIMHG
SGKEEIEFQYMNDRGDVVIRKHPFEGILNNMARRYKETESMSVREELAKN
ISNRPCIDCGGSRLRPEARNVYIGRTNLPIIAEKSIGETLEFFTALSLTG
QKAQIAEKILKEIRERLQFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQ
IGAGLVGVMYVLDEPSIGLHQRDNERLLNTLIHLRNLGNTVIVVEHDEDA
IRAADHIIDIGPGAGVHGGQVIAQGNADEIMLNPNSITGKFLSGADKIEI
PKKRTALDKKKWLKLKGASGNNLKNVNLDIPVGLFTCVTGVSGSGKSTLI
NDTLFPLAQNALNRAEKTDYAPYQSIEGLEHFDKVIDINQSPIGRTPRSN
PATYTGLFTPIRELFAGVPEARARGYNPGRFSFNVRGGRCEACQGDGVLK
VEMHFLPDVYVPCDQCKGKRYNRETLEIRYKGKTIHQVLDMTVEEAREFF
DAIPMIARKLQTLMDVGLSYIRLGQSSTTLSGGEAQRVKLATELSKRDTG
KTLYILDEPTTGLHFADIKQLLEVLHRLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGQIIATGTPEQVAKVTSSHTARFLKPILEKP
>gid:851817  HI0250  single-stranded DNA binding protein (ssb)
MAGINKVIIVGHLGNDPEIRTMPNGDAVANISVATSESWNDRNTGERREV
TEWHRIVFYRRQAEICGEYLRKGSQVYVEGRLKTRKWQDQNGQDRYTTEI
QGDVMQMLGGRNQNAGGYGNDMGGAPQSSYQARQTNNGNSYQSSRPAPQQ
AAPQAEPPMDGFDDDIPF
>gid:851828  HI0260.1  H. influenzae predicted coding region HI0260.1
MHQFQQDNQYFIFNFDRTFEQATEFFQAEFWQKQERVIGSAKGRGITYFL
QTEDWFGVNCALRHYYRGGLWGKLNKDRYRFSALETTRSFAEFHLLQRLY
EAGLPVPKPIAARIQKGKLGICYQADILTEKIENAQDLTALLQTQTLPKE
TWMQIGRLIRKLHDLQICHTDLNAHNILLQQTEQGQKCWLLDFDKCGEKS
ADFWKVQNLNRLKRSFEKEVGRMNIQFTEQNWADLTSAYHQ
>gid:851874  HI0305  conserved hypothetical protein
MGITALAFDFGTKSIGCAIGQSITGTAQALPAFKAQDGIPNWEAIEKCLK
EWKPDVVIVGLPLNMDGTEQDLTLRARKFANRLQGRFGVNVHLQDERLTT
TQARSEIFERGGFKALKKGKIDGVSACLILESWFEYAEY
>gid:851875  HI0306  conserved hypothetical protein
MWFKNLMTYRLTKPLDWDLAQLQTQLEDCQFHPCGTQDQSKFGWSAPLRG
SDLLYFSVGKQILLIAKKEEKILPANVVKRELDDRIESLEQKENRKLKKV
EKQTLKDDVVMNLLPRAFSKNQHTALWIDTENNLIHIDAASSKRAEDALA
LLRKSLGSLPVVPLAFANEPSTILTNWILQDNLPHWLLALEEAELRGSQE
DSVIRCKKQPLENEEILALLQDGKKVVSKLALEWEDTLTFVFNEDCTIKR
LKFADTVREKNDDILKEDFAQRFDADFVLMTGILAKLTENLLDEFGGEKA
RL
>gid:851878  HI0309  integrase/recombinase (xerD)
MKNLALIDLFLNEYWIEKGLSENTVQSYRLDLTALCDWLDKNDLSLETLD
AVDLQGFLGERLEKGYKATSTARMLSAMRKLFQYLYREKYRVDDPSAVLS
SPKLPSRLPKYLTEQQVSDLLNTPNVEVPLELRDKAMLELLYATGLRVTE
LVSLTIENMSVQQGVVRVIGKGNKERIVPMGEEAAYWVRQFMLYGRPVLL
NGQSSDVVFPSQRAQQMTRQTFWHRVKHYAILADIDADALSPHVLRHAFA
THLVNHGADLRVVQMLLGHTDLSTTQIYTHVAKERLKRLHERFHPRG
>gid:851880  HI0312  Holliday junction DNA helicase (ruvB)
MIEADRIISGQAKVDEDVIDRAIRPKLLADYVGQPQVREQMDIFIKAAKL
RQDALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAM
LTNLEPHDVLFIDEIHRLSPAIEEVLYPAMEDYQLDIMIGEGPAARSIKL
DLPPFTLVGATTRAGSLTSPLRDRFGIVQRLEFYSVEDLTSIVARSAGCL
NLELEQQAAFEVARRSRGTPRIANRLLRRVRDYADVRNGGIISINVAKQA
LSMLDVDDAGFDYLDRKLLSAVIERFDGGPVGLDNLAAAIGEERDTIEDV
LEPYLIQQGFLQRTPRGRIATSQTYRHFGLQKLSD
>gid:851881  HI0313  Holliday junction DNA helicase (ruvA)
MIGRLQGILLEKQPPEILLNVQGVGYELLLPMTSFYDLPEIGQETTLFTH
LVVREDAHLLFGFAQKTDRTLFRELIKTNGVGPKLALAILSAMSVEQFAY
AIEREELSKLTKIPGVGKKTAERLLVELKGKFKGVKQSDFFVESTHIPLS
PSIESHSESSSDEAISALIALGYKPVEAEKMVKRVAKPELTSEQVIREAL
KVAL
>gid:851882  HI0314  crossover junction endodeoxyribonuclease (ruvC)
MSIILGIDPGSRVTGYGVIRQTGKHLEYLGSGAIRTQVEDLPTRLKRIYA
GVTEIITQFQPNMFAIEQVFMAKNADSALKLGQARGTAIVAAVNNDLPVF
EYAARLVKQTVVGIGSADKVQVQEMVTRILKLSDKPQADAADALAIAITH
AHSIQHSLHIANSVKMTETQEKMTALLKTRYSRGRFRLKI
>gid:851884  HI0316  datP pyrophosphohydrolase (ntpA)
MRSDLTAFLMMQYKNNQSVLVVIYTKDTNRVLMLQRQDDPDFWQSVTGTI
ESDETPKKTAIRELWEEVRLDISENSTALFDCNESIEFEIFPHFRYKYAP
NITHCKEHWFLCEVEKEFIPVLSEHLDFCWVSAKKAVEMTKSQNNAEAIK
KYLFNLRR
>gid:851891  HI0324  ribonuclease T (rnt)
MSDSQEIPYHNQLKNRFRGYFPVIIDVETAGFDAKKDALLELAAITLKMD
ENGYLHPDQKCHFHIKPFEGANINPESLKFNGIDIHNPLRGAVSELDAIT
GLFQMVRRGQKDADCQRSIIVAHNAAFDQSFVMAAAERTGVKRNPFHPFG
MFDTASLAGLMFGQTVLVKACQAAKIPFDGKQAHSALYDTERTAKLFCYM
VNHLKDLGGFPHIASELEQEKTTEKETAL
>gid:851893  HI0326  H. influenzae predicted coding region HI0326
MTVQQLIQRLDQKVQQLYQAHLSKREEKIFAKFDRTLFSENGQNVSFYLK
EINQTLDRIKTLESNDSNHYNFLAERLLANVPFFRKL
>gid:851898  HI0332  DNA repair protein (recO)
MQSELQRGFVLHRRPYSETSLLVDLFTEESGRLTVIAKGARAKRSSWKSV
LQPFTPLLLRWTGKSTLKTLTKAEPAAITLPLQQIALYSGFYVNELLTRV
IESETPNPALFQHYLKCLTGLATETNIEPTLRLFEFQLLQILGYGVDFLH
CAGSGEPVDFSMTYRYREEKGFIASLVKDNLTFYGRDLLAFEALDFSDDA
VRQAAKRFTRIALKPYLGDKPLKSRELFTQNILLLK
>gid:851905  HI0339  primosomal protein N' (priA)
MKIVRVALAVPLPRLFDYFVPDDVSLQIGMRVLVPFGTQKRVAIVADFPT
KSDVPEDKLKAILQPLDLAPLFTPIYWDWLHWAANYYQAGLGDVLFQALP
VKLRNGESAVKNDRTFWRITDAGKNALKQGELKRSKKQAEALQYLSETDL
EKGNNDFSSAIWSALKAKGFIEEITIQTNPLSWQQRLGNNPIVNAENRLT
LNKQQALAFSQLLFHSGFNVWLLDGVTGSGKTEIYLQYIEEILKSGKQVL
VLVPEIGLTPQTVQRFKVRFNVEIDVLHSNLTDTQRLYVWDRARSGQSAI
VIGTRSALFTQFSNLGAIILDEEHDSSYKQQDSWRYHARDLAIVLAQKLN
ISVLMGSATPSLESINNVQNGKYQHLVLSKRAGNSTALRHFVIDLKNQNI
QNGLSKPLLERMKAHLEKGNQVLLFLNRRGFAPVLLCHECGWIAQCPHCE
KPYTYHQHQNVLRCHHCGAQKTIPRQCGDCGSTHLVTTGLGTEQLEETLK
TLFPHYSVARIDRDSTSRKGKLEGYLEDIQQGKSQILIGTQMLAKGHHFP
NVTLVALVNVDSALFSLDFRAEERLAQLYIQVAGRAGRADKQGEVVLQTH
YPDHPLLTTLLANGYQAFAKETLQLRHSMGLPPFTFQALIKAQARHSDLA
ENCLSQIADFFQSKQITGLQMLGPMPAPFSKKAGQYRWQLLLQHPSRMTL
QKALREYQQAELEKNSQVRLILDVDPQDLS
>gid:851951  HI0387  ATP-dependent helicase (dinG)
MDYENQIANIFSLNGELSQNIKGFRPRAEQLEMAYAVGKAIQNKSSLVIE
AGTGTGKTFAYLAPALVFGKKTIISTGSKNLQDQLFNRDLPAIKKALNFT
GKIALLKGRANYLCLERLDQVIAQGVLGDKSVLAELSKVRKWNNSTKTGD
FTECIELAEDSPIIPQLTSTAESCLGTDCPNYSECYVASARKKALNADLV
VVNHHLFFADMAVKESGFGELIPNAEVIIFDEAHQLPDIASQYFGQSLTS
RQLFDLCKDINIVYRTELKDMQQLGTTSDTLLKVVQDFRLLLGNGSNVRG
NWRELYTQSAVKKAFELLQEKIDFLSEVIKLALGRSQTLDSIFERVESIK
IQLKRLSETNIVGYCYWYEGNGRQFGLHITPLTVADKFGAQLEAKEAAWI
FTSATLEVGGTFNHFCQRLGIENATQKILYSPFNYPEQSLLCVPRYLPNT
NQMNTLNSLGEILLPVIEANKGRCFVLCTSYSMMRGLAEYFREKSHLSIL
LQGETSKGKLLEQFIKETHSVLVATSSFWEGVDVRGDALSLVIIDKLPFT
APDEPLLKARIEDCRLQGGDPFNDIQIPEAVITLKQGVGRLIRDVTDRGV
VIICDNRLVMRNYGETFLKSLPNSSRTRDLNKVIQFLQNK
>gid:851962  HI0397  exodeoxyribonuclease VII, large subunit (xseA)
MSDNIYSVSQLNSAARQMLEGNFCQIWLTGEISNFTQPVSGHWYLTLKDE
NAQVRCAMFRMKNLRVAFRPQNGMQVLVRANVSLYEPRGDYQLIIDSMHP
AGEGLLQQQFEALKMKLAAEGLFAQNLKKTLPHFSKAVGIITSSTGAALQ
DILHILARRDPSLKVVIYPTAVQGKEATAEIVQMIELANARQEVDVLIVG
RGGGSLEDLWCFNEEEVARAIFRSTLPIISAVGHETDVTIADFVADLRAP
TPSAAAELVSRNQDELLQQLRHQQQRLDMAFDRLFTRKSQRLKQLALRLQ
NQHPQNQLRAQQAKNEQLTHRLQLAILRQFENTQQKFTALSVRLKQNPLP
YRIQRYQQGLEQLKVRLNFCVNRQVTERQNKLATLCGKLDGLSPLKVLAR
GYSIAENPQGKAIVSVKDVNQGDFITTQVADGKIVSKVL
>gid:851963  HI0398  conserved hypothetical protein
MQFWRKQMSEIQHFSQQDIEILGEQTLYEGFFTLKRIQFKHKLFAGGQSG
VVTRELLIKGAASAVIAYDPKEDSVILVEQVRIGAAYHPESHRSPWLLEL
IAGMVEKGEKPEDVALRESEEEAGIQVKNLTHCLSVWDSPGGIVERIHLF
AGEVDSAQAKGIHGLAEENEDIKVHVVKREQAYQWMCEGKIDNGIAVIGL
QWLQLNYAQLQQSWKRS
>gid:851967  HI0402  methylated-DNA--protein-cysteine methyltransferase (dat1)
MCFSFYKTRRKMTALYYTYYPSPVGRLLILSDGESITHIDFEKEQYAPNP
KWHKQDELPVFQKVRLAFERYFNGEVECFSNIPLKPEGTAFQQAIWQALR
EIDYGELSTYGELALRINNPKAVRAVGGAVGSNPISIIIPCHRILGKDRT
LTGFGGGLEAKRFLLQLEKIPYIDKGTENTKPRFFKKYHE
>gid:851968  HI0403  DNA mismatch repair protein (mutH)
MIPQTLEQLLSQAQSIAGLTFGELADELHIPVPIDLKRDKGWVGMLLERA
LGATAGSKAEQDFSHLGVELKTLPINAEGYPLETTFVSLAPLVQNSGVKW
ENSHVRHKLSCVLWMPIEGSRHIPLRERHIGAPIFWKPTAEQERQLKQDW
EELMDLIVLGKLDQITARIGEVMQLRPKGANSRAVTKGIGKNGEIIDTLP
LGFYLRKEFTAQILNAFLETKSL
>gid:851987  HI0422  ATP-dependent RNA helicase (srmB)
MNLSQFEQFDLSPELLKALEKKGYSRPTAIQMEAIPAAMEESDVLGSAPT
GTGKTAAFLLPALQHLLDYPRRKPGPPRILVLTPTRELAMQVAEQAEELA
QFTHLNIATITGGVAYQNHGDVFNTNQDLVVATPGRLLQYIKEENFDCRS
VEMLIFDEADRMLQMGFGQDAEKIAAETRWRKQTLLFSATLEGELLVDFA
ERLLNDPVKVDAEPSRRERKKINQWYYHADSNEHKIKLLARFIETEEVTR
GIVFIRRREDARELSETLRKRGIRSAYLEGEMAQTQRNNAIDKLKSGIVT
VLVATDVAARGIDIDDVSHVMNFDLPYSADTYLHRIGRTARAGKKGTAVS
FVEAHDYKLLGKIKRYTEEILKARILAGLEPRTKPPKDGEVKSVSKKQKA
RIKEKREEKKKTEAKKKVKLRHKDTKNIGKRRKPSNSNV
>gid:851995  HI0430  DNA-binding protein HU-alpha (hupA)
MRFVTIFRNPAFNSSQVRLSFAQFLRQIRKDTFKESNFLFNRRYKFMNKT
DLIDAIANAAELNKKQAKAALEATLDAITASLKEGEPVQLIGFGTFKVNE
RAARTGRNPQTGAEIQIAASKVPAFVSGKALKDAIK
>gid:851997  HI0432  conserved hypothetical protein
MKILQQDDFGYWLLTQGSNLYLVNNELPFGIAKDIDLEGLQAMQIGEWKN
YPLWLVAEQESDEREYVSLSNLLSLPEDEFHILSRGVEINHFLKTHKFCG
KCGHKTQQTQDELAVQCIHCGYQTYPVICPSIIVAVRRGHEILLANHKRH
YSPNGGIYTTLAGFVEVGETFEQAVQREVFEETGISIKNLRYFGSQPWAF
PNSQMVGFLADYESGEITLQESEIHDAQWFSYDQPLPELPPTGTIARKLI
HVTLELCKAEHKCD
>gid:852008  HI0443  recombination protein (recR)
MQSSPLLEHLIENLRCLPGVGPKSAQRMAYHLLQRNRSGGMNLARALTEA
MSKIGHCSQCRDFTEEDTCNICNNPRRQNSGLLCVVEMPADIQAIEQTGQ
FSGRYFVLMGHLSPLDGIGPREIGLDLLQKRLVEESFHEVILATNPTVEG
DATANYIAEMCRQHNIKVSRIAHGIPVGGELETVDGTTLTHSFLGRRQID
>gid:852009  HI0444  DNA topoisomerase III (topB)
MRLFIAEKPSLARAIADVLPKPHQRGDGFIKCGDNDVVTWCVGHLLEQAE
PDAYDPKFKQWRLEHLPIIPEKWQLLPRKEVKKQLSVVEKLIHQADTLVN
AGDPDREGQLLVDEVFSYANLSAEKRDKILRCLISDLNPSAVEKAVKKLQ
PNRNFIPLATSALARARADWLYGINMTRAYTIRGRQTGYDGVLSVGRVQT
PVLGLIVRRDLEIEHFQPKDFFEVQAWVNPESKEEKTPEKSTALFSALWQ
PSKACEDYQDDDGRVLSKGLAEKVVKRITNQPAEVTEYKDVREKETAPLP
YSLSALQIDAAKRFGMSAQAVLDTCQRLYETHRLITYPRSDCRYLPEEHF
AERHNVLNAISTHCEAYQVLPNVILTEQRNRCWNDKKVEAHHAIIPTAKN
RPVNLTQEERNIYSLIARQYLMQFCPDAEYRKSKITLNIAGGTFIAQARN
LQTAGWKELLGKEDDTENQEPLLPIVKKGQILHCERGEVMSKKTQPPKPF
TDATLLSAMTGIARFVQDKELKKILRETDGLGTEATRAGIIELLFKRGFL
TKKGRNIHSTETGRILIQALPNIATQPDMTAHWESQLTDISQKQATYQQF
MHNLNQILPDLVRFVDLNALRQLSRIKMIKSDRAKPKSAVKKSSKSNGET
D
>gid:852020  HI0454  conserved hypothetical protein
MFIVDSHCHLDALDYENLHKNISDVVEKAHARDVKHLLAIGVTLSRFEQA
YDSLREFNNVSLACGVHPLDFEEEPYDAERLLRLAQDPKVIAIGEIGLDY
YYSADNKAAQQAVFGSQIDIANQLDKPVIIHTRSAGDDTIAMLRQHRAEK
CGGVIHCFTETMEFXKKALDLGFYISCSGIVTFKNAEAIREVIRYVPMER
LLVETDSPYLAPVPYRGKENQPAYTREVCEYVATLKGVSAEAFAQITTQN
FERLFKIRVE
>gid:852021  HI0455  DNA polymerase III, delta' subunit (holB)
MTALYPWLMPIYHQIAQTFDEGLGHHAVLIKADSGLGVESLFNALAQKIM
CVAQGDKPCGQCHSCHLMQAHSHPDYHELSPINGKDIGVDQVRDINEMVA
QHAQQNGNKVVYVQGAERLTEAAANALLKTLEEPRPNTYFLLQADSSASL
LATIYSRCQVWNLSVPNEEIAFEWLKSKSAVENQEILTALAMNLGRPLLA
LETLQEGFIEQRKNFLRQFWVFYRRRSPLELLPLFDKERYVQQVDWILAF
LSDCLKHKLEIDSHRQVADLGRGIEQFSDEQTALGLLQAIKIMQKVRSDL
LTINGVNVELMLLDGLTRLVTEVFETQ
>gid:852058  HI0493  conserved hypothetical protein
MRGRTRIGKFTTCGERNPKKVARTQPTKKDLKTQNPILHSDQGWLYQMVG
YQAILRENSIQQNMSRKGNYLDNNAMENFFGRLKTECYYDKRFETFKQLK
KQLMSIFIITTMITFRGN
>gid:852078  HI0513  modification methylase (hindIIM)
MDESKKISLGQFFTPTHIVKYMIGLMTKNKNASILEPSSGNGVFLDSLIQ
LGYTNLTSYEIDGDIISHPFVINSSFITSYDKPQYDSIIGNPPYVRWKNL
SELQKKELKDNSIWKMYCNSLCDYFYIFIIKSILQLKVGGELIFICPDYF
FSTKNAEGLRKFLINNGSFEKIILFNESKVFHGVSSSVVIFKYIKGKNID
NINIINIDSKSPIKSEDIESLGESYYIPRFSSSDVWVTSPNHIKVALDKF
ESYCKTIKKVQPKSLFDDLEFSRIGSVCDIGNGMVSGLDKAFQMNDINYS
ELELLNSICVAKAKHLDAFCFSGYTRYKFILDDINEDKLITYFPNFFYEF
NNYKDYLLKRYSYNKYLPYWKWAFLRNFSLFSKNEKKIFVPCKERISKKS
NFRFSLVDEFIYPTQDVTALYKKENVKESIEYITAYLNSKAVFLWMKYKG
VVKGNVVEFSEKPLANIPFRRIDWQLKSEKKIHDDITNLVRKYLSNKEFS
ILHEINLNLEKLGIKVEI
>gid:852097  HI0532  DNA primase (dnaG)
MKGSIPRPFIDDLLTKSDIVDVINTRVKLKKAGRDYQACCPFHHEKTPSF
TVSQKKQFYHCFGCGAHGNAISFLMDYDKLEFIEAIEELAAMAGLEIPYE
KRVNHSGKPQANYQTKRNLYELMQEIATFYQNQLPLNTQAQEYLQQRGLS
PEIIERFQIGFVPNAMDTVLRKFGVNREEQQKLIELGMLSRNDRGNIYDK
FRNRIMFPIRDKRGRTVAFGGRVLTDEKPKYLNSPETITYHKGKELYGLY
EALQTNDEPKQLLVVEGYMDVVALAQFGVDYAVASLGTSTTSEQIQLILR
STEQVVCCYDGDRAGRDAAWRALENALPYLEDGRQLKFIFLPDGEEPDTY
IRQYGKEKFEEYIESAQSLSEFMFAHLSPQVDFSTKEGRGKLVALAAPLI
HQIPGEMLRLSLRNMLAQKLGIFDQTQLENLIPKKLEQANTQQKVTHNKI
KKTPMRMVISLLMQNPELVKRMSESGVQALRAEAGFEILEKLTALCRQRE
GITTGQILEYFRNTSYSNPLEILATWDHLLDESDIINAFSQNYRRLNIQA
IERDIEMLIAKERTEGLTNEEKTVLVHLLAGKEQQKKQLVNPL
>gid:852111  HI0546  primosomal replication protein N (priB)
MGVVSRLPKRLKSPSGIEHCKFLLEHRSDQIESGFTRQAWLKMPVQISGN
QLIEKTQSITVGSKILVVGFITSHKTQSGLCQLVLHAEQIEFID
>gid:852119  HI0554  H. influenzae predicted coding region HI0554
MTTKYNAGIHHRRSIRLKHYNYRSEGFYFITICCKNKECLFGHIINQQMQ
LNDLGNYVKQCWENIPMFFPQVRIDEFVIMPNHLHGIIEIIEQVKGKCNL
PLQLRATQLPQKGTSQTIGSIVRRFKAGVTSWARKNSEIFDVWQRNYYEH
IIRDEKSYLQIYEYIQNNPILWEQDQLYVD
>gid:852132  HI0567  DNA gyrase, subunit B (gyrB)
MSETTNDNYGASSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDN
AIDEALAGHCSDIIVTIHDDNSVSVQDDGGGIPVDIHPEEGVSAAEVIMT
VLHAGGKFDDNSYKVSGGLHGVGVSVVNALSDKLQLTIRRQGHVHEQFYH
LGEPQSPLTVIGETEATGTTVRFWPSSDIFAITTFDYKILAKRLRELSFL
NSGVSIRLIDKRDGSEDHFHYEGGIQAFVEYLNKNKNPIHPKPFYFTAEK
DGIGVEVALQWNDGVNENVYCFTNNIPQRDGGTHLAGFRGALTRSLNSYM
ENEGMLKKEKVATSGDDAREGLVAIISVKVPDPKFSSQTKDKLVSSEVKS
AVESAMNEKMQEYLLENPADAKIIVNQIIMAARAREAARKAREMTRRKGA
LDIAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKVGRDRKTQAILPLK
GKILNVEKARFDKMLSSQEVGTLITALGCGIGRDEYNPDKLRYHHIIIMT
DADVDGSHIRTLLLTFFYRQMPELIERGYVYIAQPPLYKVKKGKQERYIK
DADEMEQYELTLALDGAELHISTNAPAMNALVFEKLVAEYNSVQKLIGRL
NRHYPAPVLQGLIYQSPISIEMMKEESAVENWGKSFVEQLTAKETEAHQY
SVRTQFNAERQVYEAVITVRKHGIDTDYFLNFDFVHGNEYAKIVSLNKQL
NGLLEEGAYVIRGEKVQPVRSFEQAVEWLVKESRKGLEVQRYKGLGEMNA
DQLWETTMDPNSRRMLKVSIKDAVAADQLFTTLMGDEVEPRREFIELNAL
RANLDV
>gid:852165  HI0600  recA protein (recA)
MATQEEKQKALAAALGQIEKQFGKGSIMKLGDTKTLDVESISTGSLGLDV
ALGIGGLPMGRIVEIFGPESSGKTTLTLSVIAQAQKAGKTCAFIDAEHAL
DPIYAAKLGVDVKELFVSQPDNGEQALEICDALVRSGAIDVIIVDSVAAL
TPKAEIEGDMGDSHMGLQARLMSQALRKLTGQIKNANCLVVFINQIRMKI
GVMFGNPETTTGGNALKFYSSVRLDIRRTGSVKDGENIIGNETRVKVVKN
KLAAPFRQVDFQILYGEGISKAGELLELGVKHKLVEKSGAWYSYNGEKIG
QGKANSMKWLNENIEKSDELEARLRAELVANPEQALMADIEQSENNTESE
SDFE
>gid:852187  HI0616  ATP-dependent helicase (hepA)
MPFAIGQRWLSESENALGLGVITALDQRTVTIYFPAADETRIYAMAQAPL
SRIVFSKGETLSHQAGWQGEILDVQNMNGLLFYLVKNPQDEDVIVQERDI
SPIISFSQAKDRLFSAQIDRSTHFALRYRTLCHQQAQFKSPLRGLRGTRA
SLIPHQLHIAAEVGNRVNPRVLLADEVGLGKTIEAGMILQNQLFAEKVQR
VLIIVPETLQHQWLVEMLRRFNLHFALFDEERCNDFDLDAVNPFTTESLI
ICSLNWLETHPNRVELVLNAQFDCLIVDEAHHLVWSETSPSTAYLLVEQL
ARIIPSVLLLTATPEQLGQESHFARLRLLDPERFFDYQTFVKEQEHYQPV
VNAVESLLANKALSAVEKNHISDLLLEQDVEPLFKAIASNNDEEQQRARQ
ELIQALIDRHGTGRMLFRNTRQGVKGFPHRVYHQITLSEENDKIDWLIDF
LKLHRNEKIFVICQTAATAIQLEQILREREAIRAAVFHEKMSIIERDRAA
AYFADLENGAQVLLSSSIGSEGRNFQFAANLVLFDLPTNPDLLEQCIGRL
DRIGQKRDVQVYVPCAKDSPQSRLARWYNEGLNAFEQTCPMGMALFSQFA
DELEKVRSNSTALSENEFSGLLKQTKTAREKLKIELEKGRDRLLELNSHG
GEQAQALADQIADEDNSPELVNFALKLFDIIGVEQEDLGANSIVISPTGT
MLVPDFPGLKEEGVTVTFDRELALAREEMEFLTWDHPMIRQGIDLVASGD
IGKAAMALLVNKQLPAGTLLIELIYVVESQSPKGLQLNRFLPPTPIRLLL
DNKGNNIGEQVAFETLHSKLKPLGKNITNQMVKMARSNIESLIMRGDQLV
KSLAEPIIAEAKNQADQQLSAEINRLQALRAVNKNIRQSEIDILEQQRTQ
SLDELSKANWRLDCLRVIVTNKE
>gid:852228  HI0649  ATP-dependent DNA helicase (rep)
MKLNPQQQQAVEYVTGPCLVLAGAGSGKTRVIINKIAHLIEKCGYSPKQI
AAVTFTNKAAREMKERVAHSIGKEQSKGLLVSTFHTLGFDILKREYKALG
FKSNMTLFDEHDQFALLKELTADVLKEDKDLLRELISVISNWKNDLISPK
QAFALARDAKYQTFAKCYERYATQIRTYNALDFDDLIMLPTLLFKQNEEV
RSKWQAKIRYLLVDEYQDTNTSQYELIKLLVGDRACFTVVGDDDQSIYSW
RGARPENMVRLRDDFPRLNVIKLEQNYRSTQRILHCANILIDNNEHVFDK
KLFSTIGKGEKLLVIEAKNEEHEAERIVAELIAHRFSRKTKYKDYAILYR
GNHQSRLLEKVLMQNRIPYKISGGTSFFSRAEIKDMMAYLRLVVNQDDDA
AFLRIVNTPKREIGTATLQKLGELAQEKHISLFEAIFEFELIQRITPKAY
DSLQKFGRWIVELNDEIQRSEPERAVRSMLSAIHYEEYLYEYATSPKAAE
MQSKNVATLFDWVADMLKGDETNEPMNLNQVVTRLTLRDMLERGEDDDDS
DQVQLMTLHASKGLEFPYVYLIGMEEGILPHQTSIDEDNVEEERRLAYVG
ITRAQKELTFSLCRERRQYGELVRPEPSRFLAELPNDDVLWERDKPKLTT
EQKQEKTQNQLDRLRAILKS
>gid:852233  HI0654  DNA-3-methyladenine glycosidase I (tagI)
MTTRCPWVGEQSIYIDYHDKEWGKPEFDSQKLFEKICLEGQQAGLSWITV
LKKRESYREAFHQFDPKKIAKMTALDIDACMQNSGLIRHRAKLEAIVKNA
KAYLAMEKCGENFSDFIWSFVNHKPIVNDVPDLRSVPTKTEVSKALSKAL
KKRGFVFIGETTCYAFMQSMGLVDDHLNDCPCKTS
>gid:852236  HI0656.1  conserved hypothetical protein
MNQSLFHHSKQQEYCPQCGAPLQIKQGKKGLFLGCSAYPECDYLRPLQRS
EHKVLKTLDEICPKCGNLLQLKQGSFGMFIGCSHYPECDFVVREESESEE
KITCPECKTGHLISRRGRQGKIFYGCDNFPKCKFSLPAKPYSVPCPTCHF
PLSLLKSEDGEKQIFQCANKTCRHIFEQ
>gid:852255  HI0676  integrase/recombinase (xerC)
MLTALNRYWDYLRIERQMSPHTITNYQHQLDATIKILAQQDIHSWTQVTP
SVVRFILAESKKQGLKEKSLALRLSALRRFLSFLVQQGELKVNPATGISA
PKQGRHLPKNMDGEQVQQLLANDSKEPIDIRDRAILELMYSSGLRLSELQ
GLDLNSINTRVREVRVIGKGNKERVVPFGRYASHAIQEWLKVRALFNPKD
EALFVSQLGNRISHRAIQKRLETWGIRQGLNSHLNPHKLRHSFATHMLEA
SSDLRAVQELLGHSNLSTTQIYTHLNFQHLAEVYDQAHPRAKRKK
>gid:852284  HI0707  DNA mismatch repair protein (mutS)
MISEENFQQHTPMMQQYLKLKAENPDILLFYRMGDFYELFYDDAKKAAAL
LDISLTKRGQSAGQPIPMAGMPYHAVEGYLAKLVQLGESVAICEQIGDPT
TSKGPVERQIVRIVTPGTVSDEALLPERQDNLIAAVYQEKEKFGLATLDM
TSGRFQLCEPADKETLRAELQRIAPVELLYCEEFNEMAAIEHCKGLRRRP
IWEFELSTAITLLNRQFGTKDLRAFGVEKSPLGLSAAGCLLQYAKETQRT
ALPHIQSISLIQNQDCIQLDAATRRNLELTQNLAGGTENTLASVLDKCVT
PMGSRLLKRWIHQPVRDVEKLKQRQQSIAEILNFDLVDELQPYLQLVGDM
ERILARVALRSARPRDLTRLRTALEQIPALRAIVQQKTPPFLTALFSQIA
DFSEQCDLLQRALIETPPLLIRDGGVIAEGYNAELDEWRMLSDGATQYLE
NLEKRERESTGIDTLKIGFNAVHGYYIQISQGQAHKAPIHYVRRQTLKNA
ERYIIPELKEYEDKVLKSKGAALALEKQLYDELFDLLLPHLGSLQLASLA
LSELDVLVNLAERADTLNYVMPTFCDEVSVKIKNGRHPVVEQVLKDPFIA
NPVELNHNRHLLVITGPNMGGKSTYMRQTALITLLAYIGSFVPADSARIG
PIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLVLIDEIGRG
TSTYDGLSLAWACAEWLSKKIRSLTLFATHYFELTALPEQLEGIANIHLD
ALEHNNTIAFMHAVQNGAASKSYGLAVAALAGVPQSVIKLAKQKLTQLEK
NSSYSAEQQIQALREANHNQGELFFEQETDALREAIEKLDPDDLSPKQAL
AYLYQLKKMVG
>gid:852288  HI0710  H. influenzae predicted coding region HI0710
MALTNSSISFRTVEKTKLEAYQVIEQYGLTPSQVFNMFLAQIAKTRSIPV
DLNYLRPNKETLAAIDELDSGNAESFFIEASENYSAEEFTKRILNGGQ
>gid:852311  HI0728  ATP-dependent DNA helicase (recQ)
MLDSPLLSKIIEKPTALSVLKSVFGYQSFRKGQEEVINAALNGQDALVVM
ATGNGKSLCYQIPALCFDGLTLVISPLISLMKDQVDQLQANGIEADFLNS
SQTLEQQQQVQNKLISGQLKLLYVSPEKVMTNSFFQLISYSKVCFIAIDE
AHCISQWGHDFRPEYTQLGGLKASFPDAPIMALTATADYATQQDILRHLN
LKNLHKYIGSFDRPNIRYTLEEKYKPMEQLTRFVLAQKGKSGIIYCNSRN
KVERIAESLRNKGVSAAAYHAGMETAIRERVQQDFQRDNVQVVVATIAFG
MGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAW
LQKILLEKPETPQRQIEQHKLEAIGEFAESQTCRRLVLLNYFGEHRQTPC
NNCDICLDPPKKYDGLVDAQKVMSTIYRVGQCFGAHYVIAVLRGMHNQKI
IERQHHKLSVYGIGKDKSKEHWQSVIRQLIHLGFVQQVISELNPTLQLTE
SAKVILKGEEPLELAMPRISAISKIAHNPQRQGVANYDKDLFARLRFLRK
QIADKENIPPYIVFNDATLQEMAQYMPTSNIEMLQINGVGSIKLERFGQP
FMALIQEHKAILANAQNND
>gid:852323  HI0739  DNA polymerase III, alpha subunit (dnaE)
MSSQPRFIHLRTHTDFSMIDSIVKVKPLVKACAANEMVAMGLTDFTNFCG
VVSFYSEMLSSGMKPIIGADVKVKSPLCGDEYFDLTLLAKNNEGYRNITL
LLSKAYQRGYNDLPYIDQDWLIEHRDGVIILSGGTQGDVGKKLLKENVAE
IESAVAFYQEFFADHFYLALSRTGRPNEERYIQAALKLAERCDLPLVATN
DVMFLNTEDFEAHEIRVAIHDGYTLDDPKRPKCYTSQQYFRSEEDMCKLF
ADIPSALENTLLIAQRCSVTLRLGQYFLPQFPTGDLSTEDFLVQKSKEGL
EERLVFLFPDEKVRLEKRPKYDERLQVELDVINQMGFPGYFLIVMEFIQW
SKDNDIPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMP
DFDVDFCMDGRDRVIEHVAETYGRGAVSQIITFGTMAAKAVIRDVGRVLG
HPYGFVDRISKLIPPDPGMTLAKAFETEPQLQTAYDSDEEVRALINMARK
LEGVTRNAGKHAGGVVISPTLITDFAPLYCDNEGLHPVTHFDKNDVEYAG
LVKFDFLGLRTLTIIKWALDIINVRMVREGKPRVDIAAIPLDDPESFELL
KRSETTAVFQLESRGMKDLIKRLQPDCFEDIIALVALFRPGPLQSGMVDN
FIDRKHGREEVSYPDAEYQHASLKPILEPTYGIILYQEQVMQIAQVLAGY
TLGGADLLRRAMGKKKPEEMAKQRLVFKEGAEKNGIDGELSMKIFDLVEK
FAGYGFNKSHSAAYALVSYQTLWLKTHFPAEFMAAVMTSEMDNTDKIVGL
YDECLRMGLKVTPPDINIGKHHFSVNEQGEIVYGIGAIKGVGEGPIEALV
AARNEGGIFKDLFDLCARVDLKKINRRTFESLIMSGAFDKLGPHRAALSK
NLEDALRASDQHAKDEAMGQTDMFGVLTETHEDVENAYANTPPYTEKQIL
DGERETLGLYLSSHPVSRYLKELSHYTSTRLKDLAPNRRGQISTVAGLVV
ASRIAMTKKGNRLGIATLDDRSGRLDLTLFGESLEQFGEKLQKDTVIVAS
GQVSFDDFSGGLKMTVRELMTLDEARSRYVKSLAISLSEHQITPSFIKQF
KALLEPVSGGTLPINVYYQSPKGRALLRLGVQWSIIPTDEILTELVNLLG
ESAVELEFE
>gid:852342  HI0759  A/G-specific adenine glycosylase (mutY)
MLAKSSINAPFAKSVLAWYDKFGRKHLPWQQNKTLYGVWLSEVMLQQTQV
ATVIPYFERFIKTFPNITALANASQDEVLHLWTGLGYYARARNLHKAAQK
VRDEFNGNFPTNFEQVWALSGVGRSTAGAILSSVLNQPYPILDGNVKRVL
ARYFAVEGWSGEKKVENRLWALTEQVTPTTRVADFNQAMMDIGAMVCMRT
KPKCDLCPLNIDCLAYKNTNWEKFPAKKPKKAMPEKTTYFLILSKNGKVC
LEQRENSGLWGGLFCFPQFEDKSSLLHFLAQEKVTHYQEWPSFRHTFSHF
HLDIHPIYAEMESTLCVEQANLDWRKVMESTKEYQSNLSSAVKYWYDPQN
PEPIGLAQPVKNLLIQFVRNHYGKNSIL
>gid:852350  HI0767  conserved hypothetical protein
MKKIQTPNAKGEVRIIAGLWRGRKLPVLNSEGLRPTGDRVKETLFNWLMP
YIHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLK
CSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFHFNLAEQAISLLCEN
NWLKPNALIYVETEKDKPLITPENWTLLKEKTTGIVSYRLYQN
>gid:852440  HI0856  DNA polymerase I (polA)
MAQIATNPLVLVDGSSYLYRAFHAFPSLTNAAGEPTSAMYGVLNMLKSLI
SQVQPTHIAVVFDAKGKTFRDEMFEQYKSHRPPMPDDLRKQIQPLHDMIR
ALGIPLLVVEGIEADDVIGTLALQASSLGKKVLISTGDKDMAQLVDDNIM
LINTMNNSLLDRKGVIEKYGIPPELIIDYLALMGDSADNIPGVAGVGEKT
ALGLLQGIGSMAEIYANLEKVAELPIRGAKKLGEKLLAEKNNADLSYTLA
TIKTDVELNVTTDQLLLGESQKDQLIEYFARYEFKRWLNEVMNGADSITQ
TTEQPVKMNQYKATSQDQSAVENTPKIQIDRTKYETLLTQADLTRWIEKL
NAAKLIAVDTETDSLDYMSANLVGISFALENGEAAYLPLQLDYLDAPKTL
EKSTALAAIKPILENPNIHKIGQNIKFDESIFARHGIELQGVEFDTMLLS
YTLNSTGRHNMDDLAKRYLGHETIAFESLAGKGKSQLTFNQIPLEQATEY
AAEDADVTMKLQQALWLKLQEEPTLVELYKTMELPLLHVLSRMERTGVLI
DSDALFMQSNEIASRLTALEKQAYALAGQPFNLASTKQLQEILFDKLELP
VLQKTPKGAPSTNEEVLEELSYSHELPKILVKHRGLSKLKSTYTDKLPQM
VNSQTGRVHTSYHQAVTATGRLSSSDPNLQNIPIRNEEGRHIRQAFIARE
GYSIVAADYSQIELRIMAHLSGDQGLINAFSQGKDIHRSTAAEIFGVSLD
EVTSEQRRNAKAINFGLIYGMSAFGLSRQLGISRADAQKYMDLYFQRYPS
VQQFMTDIREKAKAQGYVETLFGRRLYLPDINSSNAMRRKGAERVAINAP
MQGTAADIIKRAMIKLDEVIRHDPDIEMIMQVHDELVFEVRSEKVAFFRE
QIKQHMEAAAELVVPLIVEVGVGQNWDEAH
>gid:852477  HI0892  ATP-dependent RNA helicase (rhlB)
MIFMQQDYLSQQRFSALPLHPIVRGALAKKGFDFCTPIQALSLPISLNGR
DVAGQAQTGTGKTMAFLTATFHHLLTHQDPNLKYPHPRALILAPTRELAV
QISNDAEFLAKASGLKTALAYGGDGYDKQLQAIERGVDILIGTTGRVIDY
VKQGVIGLDEIQVVVLDEADRMFDLGFIRDIRYLLRKCPAPQARLTMLFS
ATLSYKVRELAFEDMNEPEYIEIEPEQKTGHRIKEELFYPSNQDKMALLL
TLMEDEWPERCIVFANTKHRCEEIWGYLAADGHRVGLLTGDVAQKKRLSL
LKQFTDGDLDILVATDVAARGLHISDVTHVFNYDLPDDREDYVHRIGRTG
RAGESGVSISFACEEYAMNLPAIEEYIGHSIPVSQYETEALLELPKPYRL
KRAVPPQGHTRHRSYHAK
>gid:852486  HI0901  conserved hypothetical protein
MIDFDGYRPNVGIVICNRKGQVLWAKRCGQNSWQFPQGGINDNESAEQAM
YRELHEEVGLQPKDVRLLYVSKHWLRYKLPKRLLRYDSKPMCIGQKQRWF
LLQLVSDEKNINMQTTKSPEFDGWRWVSFWYPVRQVVSFKRDVYRKVMKE
FASILFTDNPLIFSASREANSLHYSANKKYSQTKYTKRHFYKSRGQ
>gid:852494  HI0910  mutator mutT protein (mutT)
MDKKIIQVAAGIIRNEFGQIYLTQRLEGQDFAQSLEFPGGKVDAGETPEQ
ALKRELEEEIGIVALNAELYERFQFEYPTKIISFFFYLVNEWIGEPFGRE
GQEGFWVEQHALDAGQFPPANAKLIHRLLNETHNFI
>gid:852507  HI0923  DNA polymerase III, delta subunit (holA)
MNRIFPEQLNHHLAQGLARVYLLQGQDPLLLSETEDTICQVANLQGFDEK
NTIQVDSQTDWAQLIESCQSIGLFFSKQILSLNLPENFTALLQKNLQELI
SVLHKDVLLILQVAKLAKGIEKQTWFITLNQYEPNTILINCQTPTVENLP
RWVKNRTKAMGLDADNEAIQQLCYSYENNLLALKQALQLLDLLYPDHKLN
YNRVISVVEQSSIFTPFQWIDALLVGKANRAKRILKGLQAEDVQPVILLR
TLQRELFTLLELTKPQQRIVTTEKLPIQQIKTEFDRLKIWQNRRPLFLSA
IQRLTYQTLYEIIQELANIERLAKQEFSDEVWIKLADLSVKICL
>gid:852526  HI0942  exodeoxyribonuclease V, gamma chain (recC)
MFIVYYSNQLEKQKEILSSLFKSLPPEDPFQQDIILVQSPNMAQWLQIEL
AKETGISANLKFPMPASFIWQLYAQNLPATALENPFDKDSMMWRLMRLIP
IFLEKENFSPLRNYLSSSPHSEQYKLYQLSSKIADLFDQYLVYRPEWIFA
WEKGEDEQITDQIQKQQPNLNATLFAQIQGNTKWQGELWRALVVDVKSDV
NEATHRAALHNQFLALLADKKAPKKLPSRIFIFGIPALPTAYLNILQAIS
SEVDIHLFFNNPCQEYWGDISDLRLDYLRSRQRYQFNKQDENQPLFSEDQ
LSQLENAQFDVTYQKENLQLGNPLLAAWGKMGRDFLYILVRDEEHIPTYP
VNAYQEIESNSLLGQLQSQILHLENKPLNIAKNDRTLTLHSCHSAMREVE
VLHDYLLDLFNQDPSLTPKDVVVMVADINQYTPYIQAVFGQKNGDVPQIP
FSLSDNKLSESDVLVSSYLTLLRLKESNFSAEDVLVLLDIPAMRERFNIS
LADLPLVREWVTDSGIRFGLQKNQDGINFNSWQAGLERMILGYAMREEQG
IWQDSLGLNSSYGLKGELAGNLSHFFTALSALHETLQQAHSIEKWQEILT
ALLSDFFVRNEDTSDMIFYIQEKINELAEHLKTLHFNEELQAEVIADVIT
MQLEDAPNSLKFLAGKVNFCTLLPMRSVPFKVVCLLGMNDADYPRTQTPN
SFDLMQYHYQKGDRVRRDDDRYLFLEALLAARDYCYISYVGRSITDNQPK
EPSVLVSQLLDYINQGQKENVLTVIEHPMTAFSPDNFKNNEKFTRSFATK
WLPIAQFDASSNNSEFAVTMTENLEKIEEVELDALVSFVENPVKFFFEKQ
LGVYFRDKDERIADSENFTLSGLDNYSLNNDLIYLDEQNFADYFRQAEVK
GVLPRAEFGKVYAENIRDNVLEFKKKIADLGEAKHASVDFNLSVDWQNEN
QKIRLFGYMDALFGDDSQVIHWHFAKYKDRYCIRPWIYYLIQCVTQENAV
PAKLITQDKVLELPPIEREVALAQLQIYVKDYLQSQIEIQLVPTVRNISD
FIVSDENSVSEKLQELTESNGFGPKADPYWSRVLAQTSRFKQPENIAKLL
KQTKAWFGLLFAQKKTRKTQS
>gid:852530  HI0946  formamidopyrimidine-DNA glycosylase (fpg)
MPELPEVETALRGISPYLKNFTIEKVVVRQPKLRWAVSEELITLKNVKIV
DLTRRAKYLIIHTEKGYIIGHLGMSGSVRIVPQDSAIDKHDHIDIVVNNG
KLLRYNDPRRFGAWLWTENLDDFHLFLKLGPEPLSDEFNAEYLFKKSRQK
STALKTFLMDNAVVVGVGNIYTNESLFICGIHPLKLAKNLTRNQCFSLVN
TIKDVLRKAIIQGGTTLKDFLQPDGRPGYFAQELLVYGNKDKPCPKCGGK
IESLIIGQRNSFFCPKCQKRG
>gid:852537  HI0952  DNA repair protein (radC)
MRSKSFLFFFYKYMENNDELMPREKLLAFGAKALSDYELLAIFLRTGIKG
CPVMSLSKNVLTHFGPLHALLSADKKAFCSVKGLGITQFIQLQAITEMTK
RYLKQDMLSTPIINDPETVKLFLLTELQHEEREVFMVLFLDNQHRLIKKE
RLFLGTIYVSAVYPREIIKEALYCNAAALILAHNHPSGITEPSYSDQLIT
KKIQDAAELMEIRVLDHLIVGKSDCYSFAENCLL
>gid:852567  HI0980  Hin recombinational enhancer binding protein (fis)
MLEQQRNSADALTVSVLNAQSQVTSKPLRDSVKQALRNYLAQLDGQDVND
LYELVLAEVEHPMLDMIMQYTRGNQTRAANMLGINRGTLRKKLKKYGMG
>gid:852572  HI0985  DNA processing chain A (dprA)
MNDITYTLLRLMQVPKLGGVGIDKILSNITLNELLNYDDVAFRQMGWGAI
QIRRWFKPEAKFIEPALVWSQKEGNHLVNYFSPFYPFLLKQTASFPPLLF
VKGNLTALSQRQMAMVGSRYCTTYGEYWAKHFATELSLAGFTITSGLALG
IDGHCHQAVVNIQGQTIAVLGSGLEQIYPSKHQRLSAQIIENNGALVSEF
LPNQAPIAANFPRRNRIISGLSVGTLVVEATEKSGSLITARYALEQNREV
FAVPGNIQNKSSQGCHRLIKQGAMLVENAKDILETLYQHSIHSQTEIDFD
QIAVPNYTPPPDPRRLVEAPSHPKLYSRIGYTPVSIDDLAEEFNLSVDVL
LVQLLDLELQDLIISENGLYKRV
>gid:852578  HI0991  DNA/ATP binding protein (recF)
MAISRLLVEKFRNLTAVDLDFDPCFNFLIGNNGSGKTSLLEAIFYLGHGR
SFKSAVTNRIISYDEPHFTLFGQIQESQHQWSIGLQKLRQGNTLVKINGE
DGNKISDLAHLLPMQLITPEGLTLLNGGPSYRRAFLDWGLFHHQTSFYSA
WSNLNRLLKQRNAALAQNQPYSAIKIWDVELAKLAHQVSEWRAEYAEALS
PEIEQTCQLFLPELEINVSFHQGWEKNADYYEILQQNFERDRALNYTFSG
PQKADFRFKAQGLPVEDVLSRGQLKLLMCALRLAQGEHLMKEKQRHCIFL
IDDFASELDQYKRALLAERLQQSGSQVFVTAITQRQLKEMQVENKKMFSV
HNGIINALN
>gid:852579  HI0992  DNA polymerase III, beta subunit (dnaN)
MQFSISRENLLKPLQQVCGVLSNRPNIPVLNNVLLQIEDYRLTITGTDLE
VELSSQTQLSSSSENGTFTIPAKKFLDICRTLSDDSEITVTFEQDRALVQ
SGRSRFTLATQPAEEYPNLTDWQSEVDFELPQNTLRRLIEATQFSMANQD
ARYFLNGMKFETEGNLLRTVATDGHRLAVCTISLEQELQNHSVILPRKGV
LELVRLLETNDEPARLQIGTNNLRVHLKNTVFTSKLIDGRFPDYRRVLPR
NATKIVEGNWEMLKQAFARASILSNERARSVRLSLKENQLKITASNTEHE
EAEEIVDVNYNGEELEVGFNVTYILDVLNALKCNQVRMCLTDAFSSCLIE
NCEDSSCEYVIMPMRL
>gid:852580  HI0993  chromosomal replication initiator protein (dnaA)
MNLSNLWQSCLLQLQDQVSASDLSTWLRPLQADVVADNHIVLYASNMFVK
GWVETHYLAQIQQICQTLAQNPELRISLKEGVKPAPKIVESTPNTSLRSE
SAVDFQAESSASVKFESHLNTKHLFDNFVEGKSNQLARAVGQKLAQAPGE
PSANPFFLYGGTGLGKTHLLHAIGNGILADKPNARVLYIHANNFMQHMVK
AVRDNKMDQFKKFYRSLDALLVDDIQFFAEKEKTQEEFFHIFNSLFETGR
QIILTSDRYPKEIEKIEERLKSRFGWGLTTAIEPPDLETRVAILLKKAEE
HNMNLPEEVAFFIAQRLRTNVRELEGALNRVKAMQDFKGGDIDIDFVRDT
LKDILALQERLVTIENIQKVVAEYYRIKVSDLKSKSRARSVTRPRQIAMA
LAKELTNRSLPEIGRAFDRDHTTVLNACREVPKFREQDNSIQEDWANLIR
TLSA
>gid:852594  HI1008  conserved hypothetical protein
MKTLFTSVVLCGALVVSSSFAEEKATXQTAQSVVTTQAEAQVAPAVVSDK
LNINTATASEIQKSLTGIGAKKAEAIVQYREKHGNFXNAEQLLEVQGIGK
ATLEKNRDRIIF
>gid:852627  HI1041  modification methylase
MKCVDLFSGCGGLSLGFELAGFEICAAFENWEKAIEIYKNNFSHPIYNID
LRNEKEAVEKIKKYSPDLIMGGPPCQDFSSAGKRDISLGRADLTYSFANI
VCNIRPKWFVMENVEQIKKSHILQDIINQFIDFGYGLTSAILDASYCGVP
QSRTRFSLIGKLNSEHNFLIPTLSRKLSDKPMTVRDYLGNSLNLEFYYRH
PRNYNRRGIFSIDEPSPTIRGVNRPIPKGYNINSCDPKGVELAKVRPLTT
IERSYIQTFPKSFLFSGTKTDLEQMIGNAVPVNLAKFVASAIINFEKEPI
RSMG
>gid:852642  HI1056  H. influenzae predicted coding region HI1056
MAGKAPKKAKKFILNAIIVSQSVSQSVSQSVSQSVSQSVSQSVSQSVSQS
VSQSVSQSVSQLYTKLTRKRQEIFFNQTLAFDEIDRLFDAKAFSKFSRYT
ADGKQAVGEIKRHSDGTPAENLIIKGNNLIALHSLAKQFKGKVKLIYIDP
PYNTGNDGFKYNDKFNHSTWLTFMKNRLEIAKTLLADDGVIFVQCDDIEQ
AYLKILMDDIFDRDNFLNIVTVKTKIGGVSGSSEGKSLKDSTEFINVFSK
NRERLFLNPVYQKTEVNEFIKNYEDSGKSWKYTQVLIDLGEKILLEEKDG
FKYYHYPNAQMTSIVKFSQDQNLSKEIIYTEYSHKVYRTTNAQSSIRSKI
IEDLYSIKNGIVSIEYIPQKGKNAGNLIEVFYNASNKDMFMFLSDMLIKE
KNKYFYLQKVNTLWDDIQYNNLNKEGGYIDFKNGKKPEALLRRIIDMTTK
EGDIVLDYHLGSGTTAAVAHKMNRQYIGIEQMDYIETLAVERLKKVIDGE
QGGISKAVNWQGGGEFVYAELAPFNETAKQQILACEDSDDIKTLFEDLCE
RYFLKYNVSVKEFSQIIEEPEFQSLPLDEQKQMVLEMLDLNQMYVSLSEM
DDEQFAGCLNDDDKALSRAFYQAEKKDGE
>gid:852643  HI1058  H. influenzae predicted coding region HI1058
MKTDIQTELTQALLSHEKVWANEEKTILAKNILLDLVEKTDPTIIGLLLG
NDDLKRHFFVEVNGVLVFKLQDFRFFLDKHSINNSYTKYANRIGLTDGNR
FLKDSSDIVLDFPFKDCVLNGGQSTEEGEEIYFKRNNSQSVSQSVSQSVS
QSVSQSVSQSVSQSVSQSVSQSVSQSVSQSIIHQINPKKTRNLF
>gid:852644  HI1059  ribonuclease HII (rnhB)
MFEYPQGYKLIAGVDEVGRGPLVGAVVTAAVILDPHNPIEGLADSKKLSE
KKRLALAEEIKEKARAWALGRAEADEIDEINILQASLLAMTRAVKSLKIQ
PHFVLIDGNKIPKDLAIPAQAVVKGDSLVAEISAASILAKVARDQEMEEL
DKQYPEYAFAQHKGYPTKLHLEKLAELGALPQHRRSFAPVKKALEQF
>gid:852655  HI1070  ATP-dependent helicase (hrpa)
MKNSSVKHTLTPLQQSLFSQLNDIMLVDQRRLSARIHGIGKIKSQEAQQA
VAAEIQQQIEQARLRVEQRKSAVQNPIVFPESLPVSQRKVEIQKLISEHQ
VIVVAGETGSGKTTQLPKMCLELGFGNLGMIGHTQPRRIAARSVAARIAE
ELETELGGLVGYKVRFNDQISDNTQIKLMTDGILLAEIQNDRFLNQYSCL
IIDEAHERSLNNDFILGYLKQLLPRRRRDLKLIITSATIDVERFSKHFNN
APIIEVSGRTYPVEVRYRPVVEEDDQDQLQGILNAVDELQAEGRGDILIF
MNGEREIRDTAEALQKQNLKHTEILPLFARLSAQEQNKIFHPSGLNRIVL
ATNVAETSLTVPSIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQR
KGRCGRVSEGICIRLYSEEDFNSRPEFTDPEILRTNLASVILQMTALGLD
DIEAFPFVDAPDERHIQDGVKLLEELGAFETVQTKSGEKRLLTRVGRQLA
QLPVDPRLAKMILSAVNFGCVYEMMIIVSALSIQDPRERPQEKQQASDEK
HRRFADKKSDFLAFLNLWRYLQEQQKESSKNQFRRQCQKDFLNYLRIREW
QDIYHQIRLTVREMSLPINSEKAEYQQIHTALLSGLLSHIGLKEAEKQQY
LGARNAHFAIFPNSVLFKKQPKWVMAAELVETSKLWGRMVAEIEPEWIEP
LAEHLIKKSYSVPLWSKSRGAVIADEKVTLYGVPIVAVRPVNYGAIDPTV
SREIFIQSALVEGGWNTKHKFFKENQRLVREVEELEHKSRRRDILVDDRT
LFEFYDQRIGTEVVSQKHFDTWWKKAQQKDPELLNFEHSFLINDDAEQVS
KLDFPNFWHQGNLKLKLTYQFEPGTDADGVTVHIPLPLLNQVEMTGFDWQ
IPGLREELVIALIKSLPKSYRRNFVPAPNYAQAFLSRAVPLEKPLLDTLI
YELRRMTGVTVEAEHWNWEQIPSHLKMTFRVVDENGKKIAESMNLDELKF
NLKDRVQESISAVADDGIEQSGLHIWSFADLPQCYEQKQRGFSVKAFPAI
VDEKDAVGIKLFETEFEQSVAMQQGLRRLLLLNVPSPIKYLHEKLPNKAK
LGLYFTPFGRVLDLIDDCIACAVDKLIADFGGFVWDEAGFEKLRDFVREN
LNEVTVDIAQKVEQILTLTYQLNQRLKGKMDFTMAFALSDIKSQLAGLVY
QGFVQKSGYDRLPDLQRYLQAVDKRIDKLAQDVNRDRAAMLRVEQVQQAY
QQLLAKLPKSKPISDEVAEIRYMIEELRVSLFAQQLGTKYQISDKRIGNI
ISQY
>gid:852683  HI1100  DNA ligase (lig)
MRSFFSENFMTNIQTQLDNLRKTLRQYEYEYHVLDNPSVPDSEYDRLFHQ
LKALELEHPEFLTSDSPTQRVGAKPLSGFSQIRHEIPMLSLDNAFSDAEF
NAFVKRIEDRLILLPKPLTFCCEPKLDGLAVSILYVNGELTQAATRGDGT
TGEDITANIRTIRNVPLQLLTDNPPARLEVRGEVFMPHAGFERLNKYALE
HNEKTFANPRNAAAGSLRQLDPNITSKRPLVLNAYGIGIAEGVDLPTTHY
ARLQWLKSIGIPVNPEIRLCNGADEVLGFYRDIQNKRSSLGYDIDGTVLK
INDIALQNELGFISKAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPV
AKLEPVFVAGVTVSNATLHNGDEIERLNIAIGDTVVIRRAGDVIPQIIGV
LHERRPDNAKPIIFPTNCPVCDSQIIRIEGEAVARCTGGLFCAAQRKEAL
KHFVSRKAMDIDGVGGKLIEQLVDRELIHTPADLFKLDLTTLTRLERMGA
KSAENALNSLENAKSTTLARFIFALGIREVGEATALNLANHFKTLDALKD
ANLEELQQVPDVGEVVANRIFIFWREAHNVAVVEDLIAQGVHWETVEVKE
ASENLFKDKTVVLTGTLTQMGRNEAKALLQQLGAKVSGSVSSKTDFVIAG
DAAGSKLAKAQELNITVLTEEEFLAQITR
>gid:852765  HI1182  H. influenzae predicted coding region HI1182
MKFYRTLLLFFASSFAFANSDLMLLHTYNNQPIEGWVMSEKLDGVRGYWN
GKQLLTRQGQRLSPPAYFIKDFPPFAIDGELFSERNHFEEISSITKSFKG
DGWEKLKLYVFDVPDAEGNLFERLAKLKAHLLEHPTTYIEIIEQIPVKDK
THLYQFLAQVENLQGEGVVVRNPNAPYERKRSHKF
>gid:852766  HI1183  H. influenzae predicted coding region HI1183
MMGALTCKNHRGEFKIGSGFNLNERENPPPIGSVITYKYRGITNSGKPRF
ATYWREKK
>gid:852771  HI1188  DNA helicase II (uvrD)
MMDISELLDGLNDKQRERVAAPLGNHLVLAGAGSGKTRVLTHRIAWLIAV
ENISEGSIMAVTFTNKAAAEMRHRIQSTLAKHAQHQLFGMWIGTFHSIAH
RLLRAHHLDVGLPQDFQILDSEDQLRLIKRLLKLHNFDEKAFPPKQACWY
INNKKDEGLRPNDIEDFNDRQEREWIKIYQIYQDTCDRAGLVDFAELLIR
VYELFEKKPLILQRYQQRFQHILVDEFQDTNKIQYKWIKILAGKTGQVMI
VGDDDQSIYGWRGAQIENIQKFLKDFKAETIRLEQNYRSTANILNSANEL
IANNSDRLGKNLWTEGEKGDPVGIYSAFNELDEAKFVASQIQDWVEHGGK
LDDCAVLYRSNSQSRVIEEALIRCQIPYRIYGGMRFFERQEIKDALAYLR
LINNRQDDAAFERVINTPTRGIGDRTLDILRNLTRERQITLWQAVQVATQ
ENMLAGRASTALLRFQELINSLQLDTAEMPLFAQTDFVIKHSGLYEMYQQ
EKGEKGEVRIENLEELVTATREFIKPDNAEEMTELTAFLTHASLEAGEEQ
ASPHQSCVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAKKKLTISYAESRRLYAKEERHLPSRFIAELPRECIQEIRL
RGTVTRAMNLAKVGSLSNTSAVENEWKMGQKVKHEKFGFGTVINVEGSEN
NTRLQIAFQAQGIKWLIAHLAKLEKVR
>gid:852797  HI1214  single-stranded-DNA-specific exonuclease (recJ)
MKKLIKRREIPIGNSVSNHPLLDRLYRARHIQNTKELDRTLKSMLNPNQL
YGIEQAVNLLVEAYQPQQKIVIVGDFDADGATSTALSVLALRQLGFSDVD
YLVPNRFEQGYGLSIPVAEMAIEKGVQLLMTVDNGVSSFDGVAFLKEKGI
RVLVTDHHLPPETLPPADAIVNPNLSQCGFPSKSLAGVGVAFYLMLAVRA
KFRELGIFTAETQPNFTDLLDLVALGTIADVVPLDQNNRILAYQGLMRIR
ARHCRLGIIALAEVANRNVEQFTSSDLGFCIGPRLNAAGRLDNMSIGVEL
LLANEMSKARELALDLDQLNQTRKEIEAGMKLEAIKICQNLTALFKELPY
GITLYQPDWHQGVLGIVSSRIKDQYHRPVIAFAQDSEGILKGSARSIEGL
HMRDVLERIHSQHPNMILKFGGHAMAAGLSIREEHFADFQHIFNQTVADW
LDEEHLQGVIWTDGELNSNEFNLETAELIKSVGTWGQGFPEPCFDGEFKI
LDQRAIGQNKNHLKMLLEPKQGGVLLDAIAFNINTRLYPDLSIKQARLAY
KLEINEFRGNRSLQLLVDYIEPIDE
>gid:852804  HI1221  integration host factor, beta-subunit (himD)
MTKSELMEKLSAKQPTLPAKEIENMVKGILEFISQSLENGDRVEVRGFGS
FSLHHRQPRLGRNPKTGDSVNLSAKSVPYFKAGKELKARVDVQA
>gid:852809  HI1225.1  conserved hypothetical protein
MNKQLPLPIHQIDDATLENFYGDNNLLLLDSLRKNSSDLKQPFFYIWGDK
GSGKTHLLRAFSNEYLINQRTAIYVPLSKSQYFSTAVLENLEQQELVCLD
DLQSVIGNDEWELAIFDLFNRIKASGKTLLLISADKSPSALSVKLPDLNS
RLTWGEIYQLNSLTDEQKIKVLQLAAYQRGFQLSDETANFLITRLARDMH
TLFEALDLLDKASLQAQRNLTIPFVKKILNL
>gid:852812  HI1229  DNA polymerase III, subunits gamma and tau (dnaX)
MSYQVLARKWRPKTFADVVGQEHIITALANGLKDNRLHHAYLFSGTRGVG
KTSIARLFAKGLNCVHGVTATPCGECENCKAIEQGNFIDLIEIDAASRTK
VEDTRELLDNVQYKPVVGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYV
KFLLATTDPQKLPVTILSRCLQFHLKALDETQISQHLAHILTQENIPFED
PALVKLAKAAQGSIRDSLSLTDQAIAMGDRQVTNNVVSNMLGLLDDNYSV
DILYALHQGNGELLMRTLQRVADAAGDWDKLLGECAEKLHQIALMQLLPQ
KSSDNNEHFSFLAKHISPENVQFFYQVIVSGRKDLSNAPNRRIGAEMTLL
RALAFHPKFLTAVPKANTTITPPPSTPSAVENTGNYVDVPVLSQSIKSAY
SQAKPNKTSIPNLASLSALDALEHLTQLENQERQEHKAESLAVVSETLHH
IQELDEEKSHKKMTALPVREMTEPKPKHIEKPTLPSNAAQAPQKNSTEEN
SSDDNVEIAQDEQEILSADTYRWEWSNPELAKADTGVCPSDIKQAILKDI
TPELRLKIITQTQQQDQWADIVERSGLTGFSKELALNCFLQSKTDDEINL
GLHSEKSHLRQDRSIKNLAEALSKLQGKDIRLTINLDDSNVTTPIEYRRN
IYQALREKAQNELQKDSKLQILLNEFDAKLDVESIRPV
>gid:852830  HI1247  excinuclease ABC, subunit B (uvrB)
MSEKINTKPFILHSDFRPSGDQPQAIEKLAENLTDGLAHQTLLGVTGSGK
TFTIANVIAQLNRPAMLLAPNKTLAAQLYAEMKAFFPENAVEYFVSYYDY
YQPEAYVPSSDTFIEKDASINDQIEQMRLSATKSFLERRDTIVVASVSAI
YGLGDPDSYLQMMLHLQQGAIIDQRQILAKLAELQYTRNDQAFQRGTFRV
RGEIIDIFPAESDDRAVRIELFDDEIERLSLFDPLTGSSFGAVPRFTIYP
KTHYVTPRERILDAIENIKKELVSRREYFIKEHKLLEEQRISQRTQFDIE
MMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYMPPDAILIIDESHVTVP
QIGGMYRGDRSRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSAT
PGAYELEKSGSEIIDQVVRPTGLLDPLIEIRPVSIQVDDLLSEARQRADK
NERVLVTTLTKKMAEDLTDYLDEHGIRVRYLHSDIDTVERVEIIRDLRLG
EFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARN
LNGKAILYADSITKSMEKAITETNRRREKQTKYNEEHGIVPQALNKKVGE
LLDIGQGANQKAKANKQRGKMAAEPTALYNAPKNAKEYQQQIKKLEQQMY
KFAQDLEFEKAAAIRDQLHQLREQFVFDN
>gid:852841  HI1258  transcription-repair coupling factor (mfd)
MKTAFFQPDIPTQPNDHKILGNVLPGADALAISEISEQNQNLTVVVTPDT
RSAVRLSRVLSELSSQDVCLFPDWETLPYDTFSPHQEIISSRLSALFHLQ
NAKKGIFLLPISTLMQRLCPPQYLQHNVLLIKKGDRLVIDKMRLQLEAAG
YRAVEQVLEHGEYAVRGALLDLFPMGSAVPFRLDFFDDEIDSIRTFDVDT
QRTLDEISSINLLPAHEFPTDDKGIEFFRAQFRETFGEIRRDPEHIYQQI
SKGTLISGIEYWQPLFFAEMATLFDYLPEQTLFVDMENNQTQGERFYQDA
KQRYEQRKVDPMRPLLSPEKLWLNVDEVNRRLKSYPRITFKAEKVRSSVR
QKNLPVAALPEVTIQSQQKEPLGQLRQFIEHFKGNVLFSVETEGRRETLL
DLLSPLKLKPKQIQSLEQIENEKFSLLVSSLEQGFIIEQSLPVAIIGEAN
LLGKRIQQRSRDKRKTINPDTLVRNLAELKIGQPVVHLDHGVGRYGGLVT
LDTGGIKAEYLLLNYANESKLYVPVTSLHLISRYVGGSDESAPLHKLGNE
AWAKSRQKAAEKIRDVAAELLDVYAQREAKKGFAFKYDREEFQQFSATFP
FEETYDQEMAINAVISDMCQPKAMDRLVCGDVGFGKTEVAMRAAFLAVMN
HKQVAVLVPTTLLAQQHYENFKDRFANLPVNVEVLSRFKTAKEQKQILEN
LAEGKVDILIGTHKLIQSDVKFNDLGLLIIDEEHRFGVGQKEKIKQLRAN
IDILTLTATPIPRTLNMAMNGIRDLSIISTPPARRLSIKTFVRQNDDLVV
REAILREILRGGQVYYLHNDVASIENTAEKLTALVPEARVIVGHGQMRER
ELERVMSDFYHQRYNVLVCSTIIETGIDVPTANTIIIERADHFGLAQLHQ
LRGRVGRSHHQAYAYLLTPPPKMMTKDAERRLDALENLDNLGAGFILATH
DLEIRGAGELLGNEQSGQIESIGFSLYMELLDAAVKALKEGREPSLEELT
QQQADIELRVPALLPDDYLGDVNMRLSFYKRIAAAESKAELDELKVELID
RFGLLPDATKNLLQITELRLLVEPLNVVRIDAGTQGGFIEFSAKAQVNPD
KFIQLIQKEPIVYRFDGPFKFKFMKDLSDNKVRLEFVVDLLRTIAA
>gid:852847  HI1264  DNA gyrase, subunit A (gyrA)
MTDSIQSSITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVL
FSMDREGNTANKKYVKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLR
YMLVDGQGNFGSIDGDAPAAMRYTEVRMQKITQALLTDLDKETVNFSPNY
DGELMIPDVLPTRIPALLANGSSGIAVGMATNIPPHNLNEVLNGCLAYID
KNEITIDELMQHIPGPDFPTAALINGRKGIEEAYRTGRGKVYVRARATVE
TNEKGREQIIVSELPYQVNKAKLVEKIAELIREKKIEGISNITDLSNKEG
IRIEIDIKRDAVGEVVLNHLYSLTQMQVTFGINMVALDHGQPRLFNLKEI
IEAFVLHRREVVTRRSIFELRKARERTHILEGLAVARSNIDEMIAIIRNS
KNREEAATSISSRSWTLHSDIINLLDASARPDELEENLGIQGEQYYLSPA
QVNAILELRLHRLTGIAFEEVIKEYEELLVKIADLLHILSSAERLMEVIR
EELEEVKAQFGDDRLTEITAASGDIDLEDLIAQEDVVVTLSHEGYVKYQP
LTDYEAQRRGGKGKSATKMKEEDFIEKLLVANTHDTILCFSSRGRLYWLK
VYQLPQASRGARGRPIVNILPLQENERITAILPVSAYEEDKFVVMATAGG
IVKKIALTEFSRPRSNGIIALNLRDEDELIGVDITDGSNEIMLFSSQGRV
VRFAENAVRAMGRLATGVRGIKLALTNDISDDESAVEIEDISDDNAEASL
DLNIDKVVSLVVPKGEGAILTATQNGYGKRTQLSEYPTKSRNTKGVISIK
VSERNGKVVAATQVEETDQIMLITDAGTLVRTRVSEVSIVGRNTQGVRLI
RTADDEHVVSLERVCDADEDDSLEESSSEE
>gid:852861  HI1280  conserved hypothetical protein
MLTFWHWKWLGIKNTEFKCVKGKLYLSPIKDLFNNEIIAYDLVRSPNSEQ
ITQMMKQAVARLAGAKPILHSDQGWQYQMIGYQNILRENGI
>gid:852868  HI1287  type I modification enzyme (hsdM)
MPASARWQALQEVSILNTGAELPWGGKFSGVAKLIDDAFDAIEKDNEKLK
GVLQRISGYAVNEDTLRGLIILFSDTHFTRPTYNGEPVHLGAKDILGHVY
EYFLSRFAQAEGKRSGQYFTPKSIVSLIVEMLEPYSGRVYDPAMGSGGFF
VQTERFITAHQGNINNVSIYGQEFNPTTWKLAAMNMAIRGIDYDFGKYNA
DSFTQPQHIDKKMDFIMANPHFNDKEWWNESLADDPRWAYGTPPKGNANF
AWLQHMIYHLSPNGKIALLLANGSMSSQTNNEGEIRKAIINADLVECMVA
LPGQLFTNTKIPACIWFLNRNKKRKGEVLFIDARQIGYMKDRVLRDFTAD
DIAKIADTLHAWQTSDGYEDQAAFCKSATLEEIKNNDFVLTPGRYVGTAE
QEDDGVPFAEKMQNLTALLKEQFAKSAELEAEIKKNLGGLGYE
>gid:852876  HI1296  nuclease, putative
MINRKILLTSLLLIFTVLSACSREKNTCRVVKISDGDTLTCLTKGNKSIK
VRLAEIDAPEKSQAFGQKSKKTLSDLVYQKNVRLARKGKDRYQRTLAVVY
YQKQNINLEMVKQGMAWAYKQYSHDPIYLQAQENAQAKGIGLWADNNPIE
PSQWRRQEKINMAFDYQTFPSSISLFPT
>gid:852893  HI1313  integration host factor, alpha-subunit (himA)
MATITKLDIIEYLSDKYHLSKQDTKNVVENFLEEIRLSLESGQDVKLSGF
GNFELRDKSSRPGRNPKTGDVVPVSARRVVTFKPGQKLRARVEKTK
>gid:852901  HI1321  exodeoxyribonuclease V, beta chain (recB)
MAETIPLNPITLPLNQISLIEASAGTGKTYTIGSLYLRLLLKAGENNFSR
PLNVEEILVVTFTEMATEELKKKIRERITDAINKLTAFAKTQDKSAFKND
EFLTALCDNLNIFEAIHRLKLAEQNMDLAAIYTIHGFCRRMLMQYAFHSG
IHFNLELIKDQSDLLVRFANEFWREHFYPLDFESANFIATELVSPANVLS
LLKADLGKDLQVEIENKQALSVPIQIFLPQYLGGYQKALNELKAFWLESA
DEISAIITNELVKDYPKDQLKSLNRKKYQVKRLGDWINKINQWSNNPRDY
QINTTLKDYFLQSSIEKNCEESTDKNKDKKPATPFYSPIFADLEKRVNAL
MTPDLLSKLTLYHYRQGLQQKLLDYKLNHQEKSFDDLLRLLCEALQDAQG
DELAEMIRFQYPFAMIDEFQDTDSQQYAIFSKIYRDNPEKNTGFIMIGDP
KQAIYRFRGADIFTYLKASDEAQSRFELTKNYRSEKHLVDGVNALFDFPQ
SPFIYQNIKFTAVDSRDDHLRFYLNGKVEPAYRFYLTESDKVNKTEMAKI
CAISIQHWLKSAAENQAVFQNEDTYKTLQAANIAVLVRDKNEAALVKNEL
QKLGIASVYLSDQNSVFDSNVAKELAWVLKACLNVAERPILNAIATALFG
LNAADIHQIQQNEADWQRWADSFAQYQQTWQRQGILAMLHQILLEQGISE
RLLSQATGERDLTDFLHLAEILQQAATLHESEAALLSWFEKQIQGEARQE
AQIRLESERQLVKIVTIHKSKGLEYDLVWLPFLAAPSKDPSKKYINIYYS
KERDETLWDIENRNLNALCEETFAEELRLLYVALTRAKYQMAFALPAQFD
KKWNALHYVLSQGEIGKEINLSDSKDTETLLQTFKEKMQDNVEICTKPNL
EALPTLSINTKNDDFKASEFTGNIEQDWRITSFTSIEQAHRRQNYFTESA
GKKHAVFDDAKDYDSQNAIEISTALLNENESNILDLPRGKQVGTALHRHF
ENCYFSDLANTEEIDKLRQSLQLDETFTESLQNWLQQISHTPLSNEIGIA
LADLANKDCIKEMPFYLAIREHFDVEAFNHTLKAHHHLPSESLQFEQIQG
MVRGSIDLVFRHNGKYYLVDYKSNFLGSTLADYNQEALKKEMLHSHYDWQ
YLIYTLALHRYLQSVVPHYDYARDFGGVFYLFLRGMNGEPQSGVFYDRPS
VELITELDGVF
>gid:852902  HI1322  exodeoxyribonuclease V, alpha chain (recD)
MLSVLHKLKELRILSQGDYYFAKLIADKQCHTDYAEPVKNLAILLAALCS
WRYTQGNTCSQLDRYLEHNLFGLAYRTTEEDYLAEIHEKIGYLPVEDWQN
ALCGHMAFTQDPVNQIAPMAFQFGALYFYRAWQDEYRIVQYIKNTLKKYR
TLAFSYDEIHQKLEKYFPEKQEKTDWQKVAVATAIKSPFSIITGGPGTGK
TTTVTRLLLVLQELFDCKLHIKLVAPTGKAASRLEESIKNALGFMQEKMN
VSHSLFNAIPQKASTLHSLLGVNAFNDYTRYNSHNPLQLDVLVVDETSMI
DLPMMAKLINALKPETRLILLGDQAQLASVEAGAVLGELAQFVTQPYSHE
QAAYLLATTGYKVEGSDCSNPIRDCLCHLTESRRFDKDSGIGKLSEFIQK
GKADDSLELFDHYPQELHFNSLNDEGDAVNQVVKSAVENYRTFLKMLDDL
RKQKIDPNAKNEQGISYAEAIQVQFNSVRFLTALRNNNLGVENLNKEIAL
ALREQKLLWFRNEQDWYIGKPIMITENDHNVRLYNGDIGLCLANGKVWFG
NREVLTNRIPAHEPAFMMTIHKSQGSEFKHTVMVLPTEVNPVLSRELVFT
GVTRAKKELTVFADEKIWKTAIRQTVKRQSGLGKLLEDLN
>gid:852909  HI1328.1  H. influenzae predicted coding region HI1328.1
MKCKVYTVVVPNVQSATLLPIIREKVKPDSIVYTDTFRSYDVLDVSEFSH
FRINHSTHFAENHNYINGIGNFWNHAKRHLQKFNGIPKEHFELYLKECEW
RFNNSEIKSQISILKQLVKGSLV
>gid:852910  HI1329  IS1016-V6 protein (IS1016-V6)
MRKSRLSQHKQNKLIELFVAGVTARTASKLVNVNKNTATITFIDYAYSFI
KQAHIWKCLKAKLKPMKAISAVLEKANVVAVLQGKSQYSGFSNEMQGLYR
RCS
>gid:852945  HI1365  DNA topoisomerase I (topA)
MSKSLVIVESPAKAKTINKYLGSQYVVKSSVGHIRDLPTVGSSTGEKAKP
ISTKGMDAEEKAKIKAEKERNALVKRMGIDPYHDWKANYQILPGKEKVVS
ELKSLAKKADHIYLATDLDREGEAIAWHLREVIGGNDDRFSRVVFNEITK
NAIKQAFEKPEQLNMDRVNAQQTRRFLDRVVGFMVSPLLWKKVARGLSAG
RVQSVAVKLLVEREREIKAFQPEEYWEVAVLTNNQNKQAIRLDVTDYKGK
KFDPKNQKEAQSAVDFLNVSDYVVTDLETKPTSSRPRAPFITSTLQQTAS
TRLGFGVKKTMMLAQRLYEAGYITYMRTDSTNLSQDALNMARSYIENHFG
AQYLPEKPNFYSSKENAQEAHEAIRPSDIRALPESLEGMEKDAVRLYDLI
WCQFLACQMPPAQYDSSTLTVTAGDYTLKAKGRILRFDGWTKVLPQIGKN
PEDQELPSVTVSEKLALKEVQPTQHFTKPPARFTEAALVKELEKRGIGRP
STYAAIISTIQERGYVRTENRRFYAEKMGEIVTDRLNESFGELMNYDFTA
NMEDTLDKIASGSVNWKTELNQFFKDFSSQLSKAELDELEGGMRPNSLVE
TDIKCPTCGRNMAIRTASTGVFLGCTGYALPPKERCKTTINLIPEAELLN
VLDESSETKALMDRKRCTKCGTAMDSYVIDAHRKIHICGNNPNCDGYLIE
EGSFKIKGYDGPVVECDKCGADMHLKLGRFGKYMGCTNCDNTRKILKNGE
VAPPKEEPVHFPELKCEKSDAYFVLRDGASGVFMSAHNFPKSRETRPVKI
AELVQYRERLPEKLAYLADAPQKDPEENEAIVRFSRKEKKQYVTSEKEGK
ATKWIVDFTNGKWVERKK
>gid:852958  HI1377  exodeoxyribonuclease I (sbcB)
MVKDFSFFIYDYESFGVNPATDRPAQFAGIRTDADFNIIGEPIMFYCKQT
NDYLPAPEAVMVTGITPQECNEKGLSEPEFAANILAEFSQPNTCVMGYNN
IRYDDEMTRYTFYRNFIEPYEYSWKNGNSRWDLLDLVRACYALRPEGINW
AYDDDGMPSFRLEKLTKANSIEHENAHDAMADVYATIAMAKLIKEKQPKL
FQYFFENRGKKEIEKLVDTGAMTPLVHVSGMLGNYRGNCTWVAPLAWHPT
NQNALIVCDLTGDIDNLLAKSADELRADLYTKKLELEERGVSSVPLKLVH
INKCPILAPAKTLLPETANRLGIDRQLCLDNLAKLRASFDIREKVADIFN
EERQFASNDNVETELYNGFFSNADKNNMAILRSLPAEKLSEHGLAFEDKR
ILELLFHYRARHFYKTLTRAEQIKWKKYRQNKLEKSAVEFEASLQRLVEX
HSDNSEKLSLLQQVYEYGIKLLG
>gid:852975  HI1392  modification methylase (hindIIIM)
MIDCIYNSDSIXEIKKLDSNSIHAIISDIPYGIDYDDWDILHSNTNSALG
GTSSAQHKTSLFKRRGKPLNGWSEADKKRPQEYQEWVESWSNEWFRVLKS
GSSVFVFAGRQFAHRVVVAFENSGFTFKDMLSWEKDKAPHRAQRISCVFE
RRGDIANTNKWVGWRVANLRPLFEPILWFQKPYKTGSTLADNLIKHEVGA
WNENSLTHWNIQQGALNHSNILKVRITSEDKGYHVAQKPLNLMKLLIDLV
TKEEQIVLDPFAGSGTTLLAAKELNRHFIGYEKNNGIYNIAVNRLGIEKN
NCFYNKEKK
>gid:852980  HI1397  DNA polymerase III, chi subunit (holC)
MAKTAQFYILTENCTLTVEEIACNLAASIWRSGKKVLISCESEAQALEID
ERLWQRDPNEFVPHNLSGEATQYPTPIEISWLGKRNLQRRDLLINLQQEI
PDFSHSFTQIIDFVPKDDALKTQARERYKQLRLQGWNLSTENVG
>gid:852993  HI1411  terminase, small subunit
MSDVKGKSTSGRGLTPKQEKFCQLYIELGNASEAYRQSYDCSKMTTEVIN
VKASELLNKNGKITVRVEELRQAHQQRHNLTLDNIIADLQEYRDICMGRK
PLTITTVVKNAQEGTAQSVNTECFVFEPTGANKALELLGKHLGMFTNKVD
VTTDGKPLPTVINVTFSDEPA
>gid:853005  HI1424  integrase/recombinase, putative
MHRLRQCNMKWGAEEEKKIELQAQGLQPDTLFSDVIKRYLNKITPTKRGE
KHEFNRLNRFLRHPVTDKYISDVSRRDIEDWIAERLESVKSESVRRELST
IGHIFKIALERWGYIQKSPMVGIQLPEKGKPRTQRVTEENINAIVAISEY
VDTLKTAKARTAAAILFAVETAMRAGKICSLSWGNVNFEKRTAFLPMTKN
GTSRTVPLTKNAIAILERLKVEIGDAGLCFDIKSSVLDATFRKLKKLAER
EYLHFHDTRREALTRLSKKVDVMTLAKISGHKDISILQNVYYAPDMAEVA
ELLD
>gid:853022  HI1437  exodeoxyribonuclease, small subunit (xseB)
MARKPASSQDFETTLVQLENIVTHLENGDLPLEEALKEFEQGVQLAKLGQ
ERLQQAEQRIQILLQKTEDAPLNDYKGNDYEGNA
>gid:853063  HI1478  transposase (muA)
MDNQSLKTHYSVYELANLKLKTLPSAPKNIWEQAKRENWKSQKRQGRGGG
LEYELASLPIEVQNELLLKTTPEQTAVALQKIEETRPLASNEVWQLWDEA
SAKAQEQAKIKLGTMFAVANLVESGVNVLDAFRLVCGKENAERLKNNEKL
LSVGSLKNWWYRVKDAPRQDWLPLMLNNSGKSSKNVAEIDEAAWQFFKNF
YYSREKPSLAHSYEVLKQAAQYNGWRIPSRSSLKRKMERDVPKTEEVFRR
EGQYALSRLYPSQVRTVAMLQAMEWINGDGYQHNVWVRFPDGEIKRPKTW
LWQDVRTRKVLAARTDKSENTDTIRLSLLDVISRYGLPKHLTIDNTRAAA
NKKMTGGVKNRYRYQVNENEVQGIIPALGIELHWTSIQFGKGRGQAKPIE
RAFSHGGLGDYVDKHLLLRGAYAGANAYEKPDYDGKNGAEQPVDYATFLM
ALEQGIQQWNNVGNRLTEICAGKSSYAEAFERDWAVAEKRPISQSQMRLL
LTLHEEVRLNQDGTFYLNAGKIGTNKNRYESLALIGTSHKRVVVRYDPAN
LHDKVWVYAXTGEYLAEAEITEKAGFGDQMAGREHNKAMRNWVKHTEKAA
KERAKAEEMELSNYAPAVEFEERFLEMLPEPVKAPQTQAEEVEYEEVLDF
NTVRKVPKAVEVEAEEISEFNRDWEKGLELLKKSKGR
>gid:853065  HI1480  H. influenzae predicted coding region HI1480
MSETDLLLKMVRQPVKLYSVATLFHEFSEVITKLEHSVQKEPTSLLSEEN
WHKQFLKFAQALPAHGSASWLNLDDALQAVVGNSRSAFLHQLIAKLKSRH
LQVLELNKIGSEPLDLSNLPAPFYVLLPESFAARITLLVQDKALPYVRVS
FEYWHA
>gid:853098  HI1512  conserved hypothetical protein
MATQFQGSAIIRLNGKEWPSDNDGTLTPGGKERETVKGSRVYGFSEKPTE
AMVECTVFNCAETDVMELQNITNATVEFETDIGQVYLLPGAWTVETGTLS
ADGKIKLKMASIECKRVQ
>gid:853114  HI1528  topoisomerase IV, subunit B (parE)
MTTNYSAQEITVLKDLEPVQIRPGMYTDTTRPNHLAQEVIDNSVDEALAG
FATKIEVILHPDQSIEVTDNGRGMPVDIHPTEGVSGVEVILTKLHAGGKF
SNKNYEFAGGLHGVGISVVNALSERVDIQVKRNGEIYKIAFENGSKVEEL
EIIGTCGRRTTGTIVHFKPNPKYFDSAKFSVSRLRHLLRAKAVLCSGLEI
KFIDKVNNTQDIWLYEDGLSDYLIEAVNGFETLPKKPFVGEFKGANEAVS
WALLWLPEGGELIGESYVNLIPTIQGGTHVNGLRQGLLDAIREFCEFRNL
LPRGVKLTADDIWDRCSYILSLKMQDAQFAGQTKERLSSRQSAVFVSGVL
KDAFSLWLNQNVQDAEKLAEIAISSAQRRLRAAKKVVRKKLVSGPALPGK
LADCGSQDLEKTELFLVEGDSAGGSAKQARDREYQAILPLRGKILNTWEV
SPDQVLGSTEIHDIAVALGIDPDSNDLSQLRYGKVCILADADSDGLHIAT
LLCALFLRHFPKLVQDGHVYVAMPPLYRIDLNKEVFYALDENEKEAILDR
LKNKKGKPNVQRFKGLGEMNPSQLRETTMDPNTRRLVQLTYDLGEDQGSD
TLELMDMLLAKKRSEDRKNWLQAKGDQVDLSV
>gid:853115  HI1529  topoisomerase IV, subunit A (parC)
MTNINYEGIEQMPLRTFTEKAYLNYSMYVIMDRALPFIGDGLKPVQRRIV
YAMSELGLNATAKYKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPFSYR
YPLVDGQGNWGAPDDPKSFAAMRYTESRLSKISEILLNELGQGTVDYQPN
FDGTLAEPQYLPARLPHILLNGTTGIAVGMATDIPPHNINEIADAAVMLL
DNPKAGLDDVLEIVQGPDFPTEAEIISPKSEIRKIYEQGRGSIKMRATWK
KEDGEIIISALPHQSSPSKVIAQIAEQMTAKKLPMLEDIRDEADHENPIR
IVLVPRSNRVDTDALMAHLFATTDLEKSYRVNMNMIGLDHKPAVKGLLEI
LNEWLDFRRTTVTRRLQYRLDKVLSRLHILEGLMIAFLNIDEVIEIIRHE
DDPKAELMARFNLSDEQADAILNLRLRHLAKLEENQLKAEQDELEKERLN
LEAILGSERRLNTLIKKEIQEDAKKYANPRMSQLVEREEAKMISESDMTP
AEPVTVILSEMGWVRCAKGHDIDPKSLSYKAGDSYLAHACGKSNQAVVFI
DSTGRSYALDPLSLPSARSQGEPLTGKLNLPTGATIEYVVMASEQQELLM
ASDAGYGFICKFEDLIARNKAGKALISLPENAKVLKPKTLINSTALVVAI
TSAGRMLIFPAQDLPVLSKGKGNKMITIPAANAKDRSELLTKLLLISDQA
SLEFYSGKRKIVLKPEDLQKFRAERGRKGSTLPRGLHTNLEIMVIEP
>gid:853150  HI1564  H. influenzae predicted coding region HI1564
MEKTGLPLSLESFQQLLPQIFMRAKGRSIRLIGLHVNLPEENKQEQMSLW
>gid:853160  HI1574  replicative DNA helicase (dnaB)
MDFSTVFYFLFSPHFSLKSNRYLRYHRRHSSIEISPMASQPQIKSSDKKT
AQVSIPPHSTEAEQAVLGGIMLSNQHWDGIAERVIADDFYTFQHRLIFTE
MEHLMRNQSPIDLITLDQALRSRGVSDEVGGFAYLAELSNNTPNAINILA
YADIVREKAILRELISVGNRIAENSYSPKGQDIKLILDEAEREVFAIAEK
RTTSSEGPQNVINVLESTIEKIDILSKLENHSGVTGVTTGFTDLDKKTAG
LQPSDLIIVAARPSMGKTTFAMNLCENAAMASEKPVLVFSLEMPAEQIMM
RMIASLARVDQTKIRTGQNLDEIEWNKIASVVGMFKQKNNLFIDDSSGLT
PTDVRSRARRVYRENGGLSMIMVDYLQLMRAPAFSDNRTLEIAEISRSLK
ALAKELQVPVVALSQLNRTLEQRGDKRPVNSDLRESGSIEQDADLIMFIY
RDEVYNDNSEDKGVAEIIIGKQRNGPIGRVRLKFNGQFSRFDNLAEQREY
RDDY
>gid:853163  HI1577  IS1016-V6 protein, putative
MRESRLSQYKQNKLIEIFLASVTALATAKLVNINKLQLITFIVYHCLSLK
AAYIWKCLKVKFKRMKAILVVL
>gid:853175  HI1590  conserved hypothetical protein
MSNFNFDFAENDFGPLAAKMRPTSLEQYFGQSHLIGEGKPLRKAIQAGHI
YSMIFWGPPGTGKTTLAEIIAQRINAEVERISAVTSGIKEIREAIDRAKQ
NRLADRKTILFVDEVHRFNKSQQDAFLPHIEDGTVIFIGATTENPSFELN
NALLSRARVYVLKSLTTAEIEQVLQQAVEDPKRGLGKERLILEENLLQVL
AEYVNGDARLALNCLELMVDMADETENGKKIDRTLLKEVLGERQARFDKQ
GDRFYDLISALHKSVRGSAPDAALYWYARILTAGGDPLYVARRLLAIASE
DVGNADPRAMQVALAAWDCFSRVGAYEGERAIAQAIIYLSVAPKSNAVYT
AFNTAKQQAKDLPDYDVPPHLRNAPTNLMKELGYGTEYRYAHDEPNAYAA
GENYFPPELKDTQYYFPTNRGMEIQIKEKLERLREQDKSAVKKRYK
>gid:853240  HI1656  conserved hypothetical protein
MFSLKRQQGASFEHQARLFLESKGLIFIAANQNFKCGELDLIMNDKETIV
FVEVRQRSHSAYGSAIESVDWRKQQKWLDAANLWLAKQNMSLEDANCRFD
LIAFGKTPQDIQWIPNFLD
>gid:853248  HI1664  conserved hypothetical protein
MRFFIGKEMLFDSHLHLDQLSDENIQQTLAHSKIIGMLAVSTNLNSAKKL
LNLKQTYPKKLYIAAGFHPEQQLPSLEEQKKLFQWIDEHHSSISAIGEVG
LPHYSKRENPNLDYVPYIELLERFILIAKKWDLPLNLHIVHNDVEIALEL
LQKHNIQRAHFHWFKTDEKSFQKFFSTPYFASLTPDILWNSKTQYVAQHL
SLNRLMIETDSPWQHEGFERAGISEQLLAVLQKLAELKSLPLHSVQKQIL
LNTQQFYRL
>gid:853273  HI1689  endonuclease III (nth)
MNKTKRIEILTRLREQNPHPTTELQYNSPFELLIAVILSAQATDKGVNKA
TEKLFPVANTPQAILDLGLDGLKSYIKTIGLFNSKAENIIKTCRDLIEKH
NGEVPENREALEALAGVGRKTANVVLNTAFGHPTIAVDTHIFRVCNRTNF
AAGKDVVKVEEKLLKVVPNEFKVDVHHWLILHGRYTCIARKPRCGSCIIE
DLCEYKEKVEF
>gid:853304  HI1720  conserved hypothetical protein
MICTPKVGLNNQLTKVQFFMTKYNFLFKQQVIEFYLQNDKNSSLTRRHFQ
LAETTLERWINQFNHSGINGLALLGKKRNYSPEFKLNVIQAVKNGKFSAE
AACLHFGIANSGVVSQWLQAFEKQGINGLIPKPKGRPTMKLQYPKMPPKP
KTREEELELENLRLRAENAILKKLQELNQQKMQKKPLS
>gid:853305  HI1721  transposase, putative
MTFKLRETIKINHKKVQRIMQWLGLKGKCKTQKYRSYQGEVGHIADNLLQ
RDFTATQPNEKWTTDITEFKCAEGKLYLSPIKDLFNNEIIAYDLARSPNF
EQITRMMKQAVARLEGAKPILHSDQGWQYQMIGYQNILRENGIQQSMSRK
GNCLYNSAMESFFGRLKTECYYGKRFETFEQLEKTIHEYIHYYNHERIQG
KLKGLSPVNYRTQSLN
>gid:853329  HI1740  ATP-dependent DNA helicase (recG)
MSLELLDAVPLTSLSGVGAAISNKLAKIGIHNLQDLLFHLPIRYEDRTRI
TLIANLRPEQYFTIEGIVQTCEVAFGRRPILSVSLSDGTSKIMLRFFNFN
AGMRNSFQVGVRVKAFGEVKRGRHMPEIHHPEYQIVRDNAPIVLEETLTP
IYSTTEGLKQNSLRKLTDQALALLDKVQIAEILPNEFNPHQYSLKEALRL
LHRPPPDISLEMLEQGKHPAQQRLIFEELLAHNLAMQKVRLGTQQFSALP
LHYQTDLKQRFLATLPFQPTNAQKRVVSDIEQDLIKDYPMMRLVQGDVGS
GKTLVAALAALTAIDNGKQVALMAPTEILAEQHANNFRRWFKPFGIEVGW
LAGKVKGKSRQAELEKIKTGAVQMVVGTHALFQEEVEFSDLALVIIDEQH
RFGVHQRLMLREKGEKAGFYPHQLIMTATPIPRTLAMTVYADLDTSIIDE
LPPGRTPITTVVVSEERRAEIVMRVKNACVNEKRQAYWVCTLIDESEVLE
AQAAEAIWEDLTKALPMLNIGLVHGRMKPQEKQDVMMRFKNAELDLLVAT
TVIEVGVDVPNASLMIIENAERLGLSQLHQLRGRVGRGCTASFCVLMYKP
PLGKVSQKRLQVLRDSQDGFVISEKDLEIRGPGEVLGTKQTGIAELRVAN
LMRDRKMIPTVQHYAKSLIQKYPDVAESLIRRWLNNKEIYSNA