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2024-05-06 00:12:57

Gene list

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COG category: Replication, recombination and repair
Organism: Haemophilus influenzae Rd KW20

Number of genes found: 119

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Haemophilus influenzae Rd KW20
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
HI0011 DNA polymerase III, psi subunit (holD)chromosome CDS11857 405 - 0.409877
HI0018 uracil DNA glycosylase (ung)chromosome CDS18676 660 + 0.406061
HI0041 exodeoxyribonuclease III (xthA)chromosome CDS43660 804 - 0.379353
HI0057 excinuclease ABC, subunit C (uvrC)chromosome CDS57655 1830 - 0.39071
HI0067 DNA mismatch repair protein (mutL)chromosome CDS70214 1890 + 0.395238
HI0070 DNA repair protein (recN)chromosome CDS76082 1677 - 0.376863
HI0081 conserved hypothetical proteinchromosome CDS87148 789 + 0.387833
HI0112 H. influenzae predicted coding region HI0112chromosome CDS120092 297 - 0.289562
HI0137 DNA polymerase III, epsilon subunit (dnaQ)chromosome CDS152492 771 - 0.364462
HI0138 ribonuclease H (rnh)chromosome CDS153323 465 + 0.365591
HI0192 seqA protein (seqA)chromosome CDS206691 594 + 0.345118
HI0209 DNA adenine methylase (dam)chromosome CDS223852 861 + 0.349593
HI0217 conserved hypothetical proteinchromosome CDS234763 531 + 0.322034
HI0220.2 H. influenzae predicted coding region HI0220.2chromosome CDS241428 645 - 0.336434
HI0231 ATP-dependent RNA helicase (deaD)chromosome CDS261572 1842 + 0.419653
HI0249 excinuclease ABC, subunit A (uvrA)chromosome CDS279439 2832 - 0.411723
HI0250 single-stranded DNA binding protein (ssb)chromosome CDS282424 507 + 0.443787
HI0260.1 H. influenzae predicted coding region HI0260.1chromosome CDS290110 726 - 0.381543
HI0305 conserved hypothetical proteinchromosome CDS339194 420 + 0.404762
HI0306 conserved hypothetical proteinchromosome CDS339663 909 - 0.372937
HI0309 integrase/recombinase (xerD)chromosome CDS342649 894 + 0.419463
HI0312 Holliday junction DNA helicase (ruvB)chromosome CDS344054 1008 - 0.426587
HI0313 Holliday junction DNA helicase (ruvA)chromosome CDS345069 615 - 0.380488
HI0314 crossover junction endodeoxyribonuclease (ruvC)chromosome CDS345746 573 - 0.415358
HI0316 datP pyrophosphohydrolase (ntpA)chromosome CDS347265 477 - 0.36478
HI0324 ribonuclease T (rnt)chromosome CDS352323 690 + 0.413043
HI0326 H. influenzae predicted coding region HI0326chromosome CDS354711 264 + 0.340909
HI0332 DNA repair protein (recO)chromosome CDS359129 711 + 0.40647
HI0339 primosomal protein N' (priA)chromosome CDS365938 2193 - 0.412221
HI0387 ATP-dependent helicase (dinG)chromosome CDS407000 1923 + 0.367655
HI0397 exodeoxyribonuclease VII, large subunit (xseA)chromosome CDS418569 1320 + 0.418182
HI0398 conserved hypothetical proteinchromosome CDS420065 654 + 0.415902
HI0402 methylated-DNA--protein-cysteine methyltransferase (dat1)chromosome CDS423567 573 + 0.399651
HI0403 DNA mismatch repair protein (mutH)chromosome CDS424136 672 + 0.421131
HI0422 ATP-dependent RNA helicase (srmB)chromosome CDS444029 1320 - 0.415909
HI0430 DNA-binding protein HU-alpha (hupA)chromosome CDS453698 411 - 0.347932
HI0432 conserved hypothetical proteinchromosome CDS454736 795 - 0.388679
HI0443 recombination protein (recR)chromosome CDS464716 603 + 0.436153
HI0444 DNA topoisomerase III (topB)chromosome CDS465334 1956 + 0.402863
HI0454 conserved hypothetical proteinchromosome CDS475521 783 - 0.408685
HI0455 DNA polymerase III, delta' subunit (holB)chromosome CDS476358 984 - 0.401423
HI0493 conserved hypothetical proteinchromosome CDS510454 357 + 0.355742
HI0513 modification methylase (hindIIM)chromosome CDS528932 1557 - 0.2614
HI0532 DNA primase (dnaG)chromosome CDS554392 1782 + 0.398429
HI0546 primosomal replication protein N (priB)chromosome CDS568473 285 - 0.368421
HI0554 H. influenzae predicted coding region HI0554chromosome CDS575203 543 - 0.298343
HI0567 DNA gyrase, subunit B (gyrB)chromosome CDS585576 2421 - 0.410574
HI0600 recA protein (recA)chromosome CDS621492 1065 - 0.391549
HI0616 ATP-dependent helicase (hepA)chromosome CDS648322 2772 + 0.409091
HI0649 ATP-dependent DNA helicase (rep)chromosome CDS693363 2013 - 0.408346
HI0654 DNA-3-methyladenine glycosidase I (tagI)chromosome CDS698164 558 - 0.392473
HI0656.1 conserved hypothetical proteinchromosome CDS700107 537 - 0.389199
HI0676 integrase/recombinase (xerC)chromosome CDS718776 888 - 0.408784
HI0707 DNA mismatch repair protein (mutS)chromosome CDS751161 2586 + 0.428848
HI0710 H. influenzae predicted coding region HI0710chromosome CDS757421 297 + 0.346801
HI0728 ATP-dependent DNA helicase (recQ)chromosome CDS780622 1860 + 0.396774
HI0739 DNA polymerase III, alpha subunit (dnaE)chromosome CDS796139 3480 - 0.417529
HI0759 A/G-specific adenine glycosylase (mutY)chromosome CDS822600 1137 + 0.386983
HI0767 conserved hypothetical proteinchromosome CDS829898 582 - 0.371134
HI0856 DNA polymerase I (polA)chromosome CDS902724 2793 - 0.403151
HI0892 ATP-dependent RNA helicase (rhlB)chromosome CDS945227 1257 + 0.409706
HI0901 conserved hypothetical proteinchromosome CDS957302 591 + 0.401015
HI0910 mutator mutT protein (mutT)chromosome CDS964502 411 + 0.381995
HI0923 DNA polymerase III, delta subunit (holA)chromosome CDS980328 1035 + 0.363285
HI0942 exodeoxyribonuclease V, gamma chain (recC)chromosome CDS999495 3366 + 0.366607
HI0946 formamidopyrimidine-DNA glycosylase (fpg)chromosome CDS1005582 816 - 0.378676
HI0952 DNA repair protein (radC)chromosome CDS1011307 705 - 0.339007
HI0980 Hin recombinational enhancer binding protein (fis)chromosome CDS1038094 300 + 0.37
HI0985 DNA processing chain A (dprA)chromosome CDS1041677 1122 - 0.4082
HI0991 DNA/ATP binding protein (recF)chromosome CDS1053715 1080 - 0.399074
HI0992 DNA polymerase III, beta subunit (dnaN)chromosome CDS1054796 1101 - 0.38238
HI0993 chromosomal replication initiator protein (dnaA)chromosome CDS1055909 1365 - 0.396337
HI1008 conserved hypothetical proteinchromosome CDS1073118 339 + 0.39233
HI1041 modification methylasechromosome CDS1105412 915 + 0.315847
HI1056 H. influenzae predicted coding region HI1056chromosome CDS1121801 1890 - 0.351852
HI1058 H. influenzae predicted coding region HI1058chromosome CDS1123464 585 - 0.401709
HI1059 ribonuclease HII (rnhB)chromosome CDS1124264 594 - 0.425926
HI1070 ATP-dependent helicase (hrpa)chromosome CDS1134200 3915 - 0.425287
HI1100 DNA ligase (lig)chromosome CDS1161552 2040 - 0.407843
HI1182 H. influenzae predicted coding region HI1182chromosome CDS1248907 558 + 0.358423
HI1183 H. influenzae predicted coding region HI1183chromosome CDS1249536 177 + 0.378531
HI1188 DNA helicase II (uvrD)chromosome CDS1253722 2184 - 0.399267
HI1214 single-stranded-DNA-specific exonuclease (recJ)chromosome CDS1281398 1728 + 0.403356
HI1221 integration host factor, beta-subunit (himD)chromosome CDS1292005 285 + 0.357895
HI1225.1 conserved hypothetical proteinchromosome CDS1294919 696 - 0.33477
HI1229 DNA polymerase III, subunits gamma and tau (dnaX)chromosome CDS1297779 2067 - 0.377842
HI1247 excinuclease ABC, subunit B (uvrB)chromosome CDS1322490 2040 - 0.398039
HI1258 transcription-repair coupling factor (mfd)chromosome CDS1332180 3441 + 0.401918
HI1264 DNA gyrase, subunit A (gyrA)chromosome CDS1341719 2643 - 0.41695
HI1280 conserved hypothetical proteinchromosome CDS1356988 276 + 0.384058
HI1287 type I modification enzyme (hsdM)chromosome CDS1367826 1332 - 0.487237
HI1296 nuclease, putativechromosome CDS1375488 537 - 0.370577
HI1313 integration host factor, alpha-subunit (himA)chromosome CDS1391712 291 + 0.378007
HI1321 exodeoxyribonuclease V, beta chain (recB)chromosome CDS1396509 3636 + 0.357811
HI1322 exodeoxyribonuclease V, alpha chain (recD)chromosome CDS1400144 1923 + 0.383255
HI1328.1 H. influenzae predicted coding region HI1328.1chromosome CDS1406758 372 - 0.360215
HI1329 IS1016-V6 protein (IS1016-V6)chromosome CDS1407095 312 - 0.394231
HI1365 DNA topoisomerase I (topA)chromosome CDS1450938 2607 + 0.391638
HI1377 exodeoxyribonuclease I (sbcB)chromosome CDS1472239 1422 + 0.353727
HI1392 modification methylase (hindIIIM)chromosome CDS1490870 930 - 0.305376
HI1397 DNA polymerase III, chi subunit (holC)chromosome CDS1493866 435 - 0.381609
HI1411 terminase, small subunitchromosome CDS1506035 516 - 0.393411
HI1424 integrase/recombinase, putativechromosome CDS1512159 915 - 0.397814
HI1437 exodeoxyribonuclease, small subunit (xseB)chromosome CDS1526179 255 + 0.368627
HI1478 transposase (muA)chromosome CDS1561212 2064 + 0.481589
HI1480 H. influenzae predicted coding region HI1480chromosome CDS1563537 471 - 0.392781
HI1512 conserved hypothetical proteinchromosome CDS1582885 357 + 0.467787
HI1528 topoisomerase IV, subunit B (parE)chromosome CDS1598289 1899 + 0.417062
HI1529 topoisomerase IV, subunit A (parC)chromosome CDS1600254 2244 + 0.402852
HI1564 H. influenzae predicted coding region HI1564chromosome CDS1633127 153 - 0.372549
HI1574 replicative DNA helicase (dnaB)chromosome CDS1641702 1515 + 0.39934
HI1577 IS1016-V6 protein, putativechromosome CDS1646128 219 + 0.3379
HI1590 conserved hypothetical proteinchromosome CDS1658455 1341 - 0.417599
HI1656 conserved hypothetical proteinchromosome CDS1722664 360 + 0.358333
HI1664 conserved hypothetical proteinchromosome CDS1733161 780 - 0.35641
HI1689 endonuclease III (nth)chromosome CDS1759288 636 + 0.382075
HI1720 conserved hypothetical proteinchromosome CDS1793079 567 + 0.386243
HI1721 transposase, putativechromosome CDS1793813 651 + 0.382488
HI1740 ATP-dependent DNA helicase (recG)chromosome CDS1824562 2082 - 0.417867