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# Chlamydophila abortus S26/3, S26/3

>CAB810 putative primosomal replication factor
MGNIESTTFRLYAEVIVNSNINQVLDYGLPHHLEHITKGTGVSVSLRGAK
KYGIVHQIKTQTECKRVLPVLGVIDSGIILPQDLLELMFWMSQYYFAPLG
RTLRLVLPGISSSIIQPKQQYRVLLKQSKAKTKEIILAIQKESPAQAATL
KTLLSCSSPPGLSELMDKAKVSQSPIHSLEKLGAIEIASAADLEIQEDRL
TFFLPEAHVLHPQQQDAVDKISSSLSSGKFQTHLIFGVTGSGKTEVYFQA
IREARKLGKSAILLVPEIALTIQTVTLFKAHFGKEVGILHHKLNDSDRNK
TWRDASNGNIHIVIGPRSALFCPLQNLGLIIVDEEHDPAYKQSESHPCYH
ARDVAVMRGKLANATVILGSATPSLESYANALSGKYILSELSSRAASAYP
AKISLIDMNMEREKTKTKTLFSQAALNSIEKRLAVGEQVLVFFNRRGYHT
NVSCSSCKHTLKCAHCDMVLTFHKYANVLLCHLCNSSPKNPQTSCPKCHG
TMTLQYRGSGTEKIEKVLHNIFPQVRTIRIDSDTTKFKGSHESLLKQFAT
GKADILIGTQMIAKGMHFPAVTLAIILNGDSGLYIPDFRASEQVFQLITQ
VTGRSGRSHLPGEVLIQSFLPDHSTIRCAIRQDYRAFYHQEIPGRELCSY
PPFVRLVRCIFIGKCPNLTRKEAQRIHSILKEKLDTHTQLMQITPCGHFK
IKDVFRYQFLIKSKQVLPVNKKLHEALLTAKLSPKVKFMIDVDPTTTFF
>CAB886 putative helicase
MLNFRKLRRDFTANILQDGKELFDQGAVINAKILSMNGESVCIGAQVRGL
YDNVYECEIEVDRSKSDTIDSNCDCSYNYDCQHIVALLFYLERYFNEMVV
AYSQEANLETNQEINEDVKKELQETFVAAANREEERKDRAHQKEILSEYI
HAANVLSANPFFLPQEYLEKNSAELAVLFVASNDEVFRPNQHVEFQLVLR
FPGRSKPFYISNIKTFLEGVLYQEPIILNGRHFFFTMQSFNASDRKLIDL
LIRYVRYANQPPEEKLLKSAYLTLTSLGVILAKMYEHQMADRGGCQSGEK
ESFSGIFCGNLEEPLYWSVTPAKMKFDLDFFDTPYKALLMTPLILVDDDT
LQPEQAILLESNVPGIIHNNVYHHFAPQIRRAHLRSFSKLRDVTIPEALF
GSFRENALLVFKEYAEVSNVEVLNSFVTLPYVEDVRGECNISYLDGELEA
KLYFIYDDLRVPAVPFSLQFDEIRAFIREDGILARNLVEERKIIDEVFSG
FIYDERDGAFHVKSEKKIVEFMTETIPNNQHRITFNCPETLSDQFIYDET
VFDLAFREGSEVNTYEAELKVNGYLKGISLDLLWDCISAKKRFLELPKKG
RHVKTRRGRASGSTKLPCILVLDLEKISPVIQIFNEIGFKVLDDFVEKCP
LWSLTGISPGLFKGLPVNFKMTKKLAEIQKQIRGEVDFKFQEVPEQIQAT
LRSYQTEGIHWLERLRKMHLNGILADDMGLGKTLQAIIAITQSKLEKGKG
CSLIVCPTSLVYNWKEEFRKFNPEFKAVIIDGVPSHRRRQLATLSDYDVA
ITSYNLLQKDIDVYKDFVFDYVVLDEAHHIKNRTTRNAKSVKMIRSGHRL
ILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVGKYIRTGNYMGNKTDNM
VALKKKVAPFILRRMKEDVLEDLPPVSEILYHCHLTDSQKELYHSYAASA
KKELSRLVKQEGFDRIHIHVLATLTRLKQICCHPAIFAKDVPEPGDSAKY
DLLMDLLSSLVETGHKTVLFSQYTKMLSIIKKDLEARGVRFVYLDGSTKN
RLEIVNQFNEDPGLLVFLISLKAGGTGLNLVGADTVIHYDMWWNPAVENQ
ATDRVHRIGQNRSVSSYKLVTLNTIEEKILTLQNRKKSLVKKVINSDDEV
VSKLTWEEVLELLQI
>CAB037 conserved hypothetical protein
MPKYPLEPVLAIKRDRVDRAEKIVKEQRKLLEIEQEKLREIEAARDKVKN
HYMQKIQQLRELLDEGTTSDAVLQRKAYIKVVAVQLAEEEEKVNKQKENV
LAAAKELEKAEVNLAKRRKEEEKTRLHKEEWMKEALKEEAREIEKEQDEM
GQLLYQLRKKKQRESGESSSWN
>CAB817 conserved hypothetical protein
MIKTKYEYSFGIIPIKFFGTPDKSTLKACFICHTQGKHWGFPKGHSEDKE
GPQEAAERELVEETGLSIVNFFPKVLVEHYSFNDNEVFVRKEVTYFLAEV
QGDVHADPNEICDTQWLSFQEGIRLLSFPELKEIAVEADKFINSYLFSF
>CAB496 putative DNA polymerase III subunit
MHGSSLSILSQYAYTLASHILLRDTPEAQYKISQKIHPDIQEFLPSGKGR
LHSIEIPRDIKKQIAILPYEGHYKIYIIHEVDRMTLPAISVFLKVLEEAP
SHNVILLTSAKLQRIPATILSRSLSIHIQGQDKTLPNEEEIAYLLKYASG
EMSITEVGKIVKGSVDTDKQVLRDKAKYLLEVLLTLFRDRFILSLNVSAS
AMTYPQYAKGILNLPVLPLEKVLVIIEKAYQALDNSSSATSCMEWVALQL
ASLNHRSSILTERTCP
>CAB704 putative site-specific recombinase
MTSAQFCDAILEQFTLFLSVDRGLSSNSISAYCQDITLFLKINTITSIAE
ISQDSVHLFVRQLHKRKEAEATLARRLIALKVFFRFLKEAKLLEHPPLIE
HPKIWKRLPTVLTPQEVDALLAIPKKTPTSSLISTRDTAILHTLYSTGIR
VSELCGLHIGDVSDDFLRVTGKGSKTRLVPLGKLASAAIDAYLCPFRENL
QKKQSEEHHLFLSIRGHKLERSCVWKRIHYYAKQVTHKRVSPHSLRHAFA
THLLDNKADLRVIQEMLGHARIASTEVYTHVAADTLMENFLSYHPRNLS
>CAB676 conserved hypothetical protein
MTDEERETLASQLDSLFQVLVEESQDLYHDLVLICKNENIELENSQQAVE
LIKELPSGKRILQACSDIFSSLRVPADDLNREDLSFDSLLQKLDQIAHVW
HAYRHSKDIEYAYKDLEMREKELEFKKDLFSWQKEKADRELAWKRERYAR
EIVTHKR
>CAB151 conserved hypothetical protein
MTIMSSSNQLSHQDSTSFNDQVTTNTDSLTIFDPIRYKILASTPEEKVRQ
ELITCLVEELHYPPSLIIVEKGLKTLFPLLSRKEIRLPRRRPDLLVITPA
TYTDAEGKTYNLGEPRPLLLIECKARVINQQTLNQLLSYNYIIGSPCISV
VCYKKQQTGFLNPKTHTLDFYPGLPCYSQLISYYLTLNSVQPIN
>CAB797 putative DNA primase
MYTEESLDNLRHSIDIIEVLSEHLHLKRSGGTYKACCPFHVEKTPSFIVN
PTGAYYHCFGCGAHGDAISFLMNHLGYSFSEAVLTLSKKFHVDLVIKMKD
VQSPFATGAKDELRQINAEAEKLFRFCLYQLAEGREALQYLYRRGFSPDT
VGCFHLGYAPEQTLFVHAMREKNISEKQLEDAGFIGNKWFLFSRRIIFPI
HDSLGHTIGFSSRKFLENTRGSKYVNTPETIIFKKSRALFGLHLSRRRIA
KEKRVILVEGQVDCLQMIDSGFNCTLAAQGTSFTEDHVKELSKLGVLKAY
LLFDGDDAGIKAAVRVGDMCQMAGIAAMVCRLPQGEDPDSFLMHKGARPL
GELLDQSEDYLTFLISQKMRVYPNFSPREKALVIEETITQIKKWGNPIVV
YEHLKQLASLMMIPESMVFSLAKLESGMTPAKSSLVNKEKLPKIHSDVII
ETDVLRCMLFCKTHQTCIPHTAKHYFTAMDFKHPECRKLFSHLIAYYEKH
QSNLPFDEALSLLEDRVIIELLIKRRMNTDCLETVFVQSLQKLADRQWKE
QCHPLSRQSKSAHEEKLSILEDYVRLRKDRVVITLLEPQAC
>CAB040 putative serine/threonine-protein kinase
MDCQSEILLLHQVIGAYHIKKILSKKEGSAVYQGLHSATLQSTAIKVLEP
PLVADTRRVHNFLKEARIIEQVSHPNIVKLYQYGQCRERLYIAMEYIQGV
SLRHYILTHQIPLSRAIDIILHIGRAIEYLHSRGILHRDIKPENILMNAQ
GEIKLIDFGLAVSSSTEHASHPSCLGTPAYMSPEQRQGDKVSEKSEIYSL
GLIAYELILGNLALGKVILSLIPDRVSKILAKALQPSPQDRYGSMKEFMS
HLHQYRYSQDLQQDYRNKDHTAQVNEQLYQQRFWLSPAEIVVPDFISASV
YEQGYPTHPHVYYEAYMSRDTFRLWFCYSLSGNATLVLTIIKTFVSQWGH
EDSIRSTMRKIHSELLRIHAPVDTAGMSLVCVTIPKEKKELSWITCGKTS
FWLKKQGKVPQNFTTSSLGLGKISSLQIQETKVAWEIGDGAVLHTLQADD
SMSSLNSPLFTELKDRGQTAIFCPIESVQFGILENHDGNLCPSTLISLKR
IW
>CAB646 putative SOS response nuclease
MPSLPVRISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAA
GRKRYLSTLPSFFATNLSSLPEPTVESIQGLSPTIAVKQNHFAYHSHATI
GSVTELSQHLALLFSLDGEARDPVSNKPLHLQSKEKILATLAQIPEGTQI
TLLAPLPDTSSLAIQECVRQGYTKIRMHNEISSIYPLLSSPLTTDHPIDI
VVDAFIKNESNNARMKVSLFAALQLGQGRCSIHTGSQEETFSTQVYIPET
QQTYTPLTRQLFSPHNLEDRCFKCQGTGVQITIEDPSLIQNHLSIRENCC
KLAGNCSTYFYHALYQSLADTLNFSLDTPWENLPEHIQDAFLYGQKCLVL
PVRLFDPALGKKSLTHKVWRGILNDIGEKVRYGAKPSKYVPEGTSAVPCP
QCQGIGIGEYASAATWQGKTFIELQKMPLDALFSLTSSITPSSQSVHEVL
EGFNNRLATLIQLGLSYLTLDRALATLSGGEQERTALAKHLGAELSGITY
ILDEPSIGLHPRDTDKLIQVIQKLRNQGNSILLVEHDEQMISFADRIIDI
GPRAGIFGGEVLFNGTPQEFLNKSNSLTAKYLRNELAIDIPERRAKTPST
LSLSHATTNNLKDVAISLPLERITAVTGVSGSGKSSLINDTLVPAMERLI
QGKPEPYLRIDGGEISRVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQ
LPKSQRLGLTKGHFSFNLPLGSCTECQGIGAVTVDDHTLIPCPLCHGKRF
QPQILEVQYQRKSIADILEMTAYEAEKFFMTTPHIHEKIHALCSLGLDHL
PLGRPLSSLSGGEIQRLKLTYELLSPSKKPTLYILDEPTTGLHTHDIHAL
IQVLFSLTHQGHTVVIIEHNMHIVKTADHVIELGPEGGNLGGYVLASCSP
EELILLDTPTAKALQPYFTKTPALPPCTTPCPNTHILRDISVKDAYHHNL
KHIDVTLPRNALTAISGPSASGKHTLVFDILYASGNIAYAELFPYYVREA
LIKKTPLPKVESVRGLSPVIAIRKTGIKKNSRHSLASALDITDGLEKLFS
LVGKPHCPLSGTLLEKITPQTLVAKLLHEYPHAYVTITAPISSDEDLSIT
LEAKKKEGYLKLFANKEVYDLEEPLPEILEDPAIVIQHTKISKNHEASLL
SSLTLAFSLSPTPKLHIHNHQGIVHSLTCNLGWQDSLGNSYPNVTRKLLS
REHTEGQCQQCHGSGTILKLSLMDHKEKILNYSPIALFELFFPEHPIQPV
LDLIQELKIAKATPIKNLDMHTQERLFKGTRRHPGLERILLDHGNRVPLC
PLLQPLLIQDVCPTCSGWGIHTYAQHVRIGNTSIVDIYQQDTHFLKDFLK
TLHDDQAQPIIQDLHNRLTFIDKVGLSYITLGQQQNTLSDGEYYRLHLAK
KISTNLTDIIYLLEDPLSGLHPKDVPTLIQLIKELIANNNTVIATDRSHI
LQHYAEHTIHLGPGSGPQGGYLTTARSVSLDNEEYPQTPFKHTLDVRLTV
HNITDLSVQAPLRSLVAIAGVSGSGKTSLLTEGFYQQAQKLIHNGDALFS
NVIFLDSHPLSSSQRSDISTYFDIAPSLRNFYASLTQAKALNITASMFST
NTKQGQCVDCLGLGYHLIDRAFYALEKRVCPTCSGYRIQPLAQEAVYEGK
HFGKLLQTPIEELPILFPFLQRIQAPLQALIHAGLGYLPLGQNLSSLSLS
EKIAVKIAKFLYLPPKEPTLFLLDEIAASLDRNQKSQLQKLFRTLVSQGH
SVIYVDLDVYLLKQADYIIELGPGSGKYGGKLLFAGRPKDILASESSILK
TYMCGL
>CAB224 conserved hypothetical protein
MTTYPVPQNPLLLRALRLMDAFSKSDDERDFYLDRVEGFILYIDLDKDQE
DLDKIYEELEVNAERYCLIPKLTFYEVKKIMETFINEKIYDIDTKEKFLE
ILQSKNAREQFLECIYDHESELEKWQQFYVERSRIRIIEWLRNNKFHFVF
EEDLDFSKHILEQFKIHLFDTKVSKELAQARQLLVNKAKVYYSNEALNPR
PKRGRPPKQSAKVESETTISSDIYTKVPAVARRFLFLPEITSASSITFSE
KFDTEEEFLAHLRGSGRVEDQLNLANLSERFASLKELSAKLGYDSLSTGD
FFGDDDDDSDDEKPAPKSSKTSAKRGRKKS
>CAB766 putative TMH-family membrane protein
MNTTPIATHVPTTQHALSNISSNKYQRLATVIALLAGMVLVGTLIGALVC
FALPASLTLVALVSTSLLASVILLSMSVYNLVSQFRRASSYAQIGKENIR
LEAEMIALQEKLTRSEVQLQEEQGRSSELSVKLMSTEIDLDQANQEKASL
ESKVKALKELVEKYPAIAEESQLIQSLDQVAVLVKQKEELKSALEKIKEE
GAGKLVTVQGEQIDLADLDRQLVEAYVQLEACTKRFSDLQKQLLEVSEAI
QSRDSSS
>CAB821 conserved hypothetical protein
MDTSDNSFYSSEAKQGSIVVSSEELKFKSDDISNAAMTNESFTIFTQELA
AFSSIEEQVTFSLEKMEQALRNNQGANLKLFWAIRKHCLPLFHQVENVGK
RAEFWRRYIDLTKEGRHIKSLQDEEGTFVVGQIELAISCLEQDITNFLEG
TNPLTVQEEQSVFLETQTLEKRKAFYKELHTSLVWLSSFSARIIDLRKEL
MNVGMRMRLKSKFFQHLSSLGNQVFPKRKELIEKVSDAFSEDVESFVAKY
FSRADKDALKRSVFFLRKEIKNLQQAAKCLAVSSTVFSDTRLKLSKCWDQ
LKGLEKEIRQEQSRLRVASAENSKDVREQLSGIAQVLEEGGDLFRIRKDL
DVAAKRIRSLDLIHDDVVALKTELQVLFEKLREKQEAAEQVYQEQLARDK
QIRQEAIKELTEKIKLFSEKCTSGDIHSETRSEWQELKESLTKAAFLSAS
ERISLDNQLNLTLQHITAYFEEQLLSSPDSREKLTNMRQVLSQRQERRKE
LKDKLEQDKKLLGSSGLDFDRAMQYSALVEEDKRALEELDQSILDLKRQI
QQLT
>CAB939 conserved hypothetical protein
MDLADAHLHLSDEAFVEDADDVIHRAQDSGISLLVNVTTTIDELDTSFRY
AERFPDLRFCHVAGTPPQDAHTDIDAHFHYFQGFAQAGKLAAIGEVGLDY
CFAEDSSAKERQKEVLKKYLSLALDCALPLVVHCRGAFDDFFHMIDLYYH
HDERSCPGMLHCFTGTLHEAEELLSRGWYISISGIVSFKNAGDLRSVVAQ
IPLEHLLIETDAPFLAPTPYRGKRNEPAYITHTIKAIADLHGIDPQELAA
IARKNVLRFLEGRKKG
>CAB012 putative endonuclease IV
MQVFPPPQVPLLGAHTSTSGGLQNAIYEGQEIGASTVQMFTANQRQWRRR
PLTDDLINSFKTALEETSLSYIMSHAGYLINPGAPNPEILEKSRICIQQE
IQDCLSLGITFVNFHPGAAVNDTKEACLDRIVSSFSLVEPLFEDSPPLVV
LFETTAGQGTLVGSTFEELGYLIDKLKHKIPVGVCIDTCHIFASGYDITS
PGSWKQVLKNFDDAIGLSYLRAFHLNDSMFPLGKHKDRHAPLGEGDIGME
SFKFLMTDELTRMIPKYLETPGGPDLWTKEIRQLKSFQK
>CAB764 putative TMH-family membrane protein
MTTSPVNTNPIATHVSTTQHTLFSTSVSKYQRIATAIALLAGMVLVGTLV
GALVFFALPTSVTLVALVSVALLASVILLSMAMYNLVSQSRRVSSDPQLG
EENTRLEAEMIGLREQLIRSEAQLAEEQGRCSELSVKLMSVIGDLAQANQ
EKTSLESKVQALKELVASYPAIAEEAQKMQAELKKRIADVTSAKQDVGRL
EEQVQDLETQLIQSLKQVDTLSKEKEELELCLKQLQDEGVSAVVKLQGKV
VDLVEEIEVKEKNLEFYDGRIKNLINQNSDLVATVRCLESKLDKDQRSIE
DLQDRVSLLAYMRDELTEKMKNLHCDLDTKVAAMLRLENRVQELEEEKKK
VEEDFLKAQNQIKALEASVSHKVNVTMQETARLLCQVAELNEQLDESKKE
IKVLQSEKSSLISGMDKLQAQLDELQEQLVASASSVDDSAPSEVDPDGSE
VSAADDHVGGSGNSNDLED
>CAB590 putative serine/threonine protein kinase
MESEQNIGIEFLGDYKILCYLRKDLWCQDILAEHRFIKKRYILKLLHSEF
SSSEAFMNAFHETIIKLATIKHPGILSIENVSQADNQYFLVTEEKEVPTL
SLSQYLSSFPQGLSELEIQEIVVQLAEVLDYAHSRGLVHGGLSLDSVHVD
LSGESPTVFLPELGFSFLLKDHYTQHLLTKFPERSSLDKLKELLVFQAPE
PMSGTISEDVYAFGVIVYFLLFRKFPQGVFPLPSEAFPDYIYSWDQLIKS
CLSYSIDKRPRKLTLLIVKKTLGEQLLTAKMQCKEEQLREISNEPQVPSV
ANIFREGEKRIHQEPSDHLAFVLVEAKSIDEAMDTSVDSTEEVVREDESY
ANALQSLLIREPVVSRYVEEEKEEVKPQPLFTEMVFIEGGAFIRGSREGQ
RDEHPVHEIFLQSFFLDIHPVTNEQFVRYLECSGSEQDKYYNELIRLKDS
RIQRRSGKLVIEPGYAKHPVVGVTWYGASGYAAWVGKRLPTEAEWEIAAY
GGVAQQRYPCGEEIDKSLANFFSSDTTAVMSYPANAYGLYDMAGNVYEWC
EDWYSYDFYELSAQESHAPQGPAQGVYRVLRGGCWKSLKDDLRCAHRHRN
NPGAVNSTYGFRCAKGVK
>CAB772 putative TMH-family membrane protein
MKSVSPCFYLKLENSEDRCCHFSDSRVHFLTTIVSLIASLLIITGAIAAV
ILFGTQLGVLYSTVIIGVSVAIGVLLFSASLQCFSCPAVVSQSQRFSEDN
PRSHIHDSKLSEATTLTEESVEAIERELHTLLSEYEQERLAYECCISQRN
LVKISMDSAKEEFDNAYADVQRLHRLFTAEDSNNLSNECQESLSRYREKS
IDYARSIQRYEDLFQQMHSHQDLMHFQKIAPIHERVHILLQERDESQTRI
RALEDALSLRNRDLVVLSSMDTDLQSSIKKLQNTQTVNQGTIRALQTRLE
EVEKNRNSLEEAPFLVIGRESEGHSREIVLPDNIINVRSLEEENEKLKRT
LAFYYRMVERMETRFESQSPSMLTETATSQDFLMIANSEEYTRKQVGAMI
ASYFEDERESQQRELIRLRELSSQQAQEIADLRSGFLRSGDTISEDTNLD
IIDMSLEEDTVHNVVVAEDPFFGSP
>CAB900 putative DNA helicase-related protein
MVLNALAGFRQTAMDYLATNRHDIALDFSGDCYTIRIPDEDSPDGDWVST
LKFSNIDNLTFASCSCPDGDCCVHLMTAFFSAYDAHGWLPLHHKFHLSFW
YALFFKFFIEEARLHADGDRHYSIASSHVTLEISALSPEAFTKWLPIVHQ
STEPKIPSEKTFPQSALYRIAKCFFFFAEAGAQLDLIENNQGFPTQFSLQ
WEGLSLKGEILDFTTLEYLFPKINFAQTSLPGNYRDFSVTKVRVAPEESK
IYFTIHPAQQDNTTQTITPLGSVGYVAGSQLVILPSQETSVSIYVLSLLP
ATLKKQILSLLHYDAEERPIRYSIHFLRDSSLSFSAYLDTPGDLENGELI
YPDFCYVPERGLFTIEGLLSPQISFIIKADQVEEFLNHEGSLIREPGFEV
FTNQVPEGQLTYNITQQGVLLFHYNTGDPAAIDIHYGPWTYYSGQGFFLQ
RKADLEIQDGLIVEADQIPSFIMKHEVVLRTIPNFFAPTPPLKNLFFEVH
KETKGSGLYLKPVFQGLEEENCRLFGVFLYRENLGFNLLPTPLQSLCSLP
KKIPPEQVPDFIHQNFQNDKLVFVDPQLCLPETFELVIRSITRPHPSSPL
HLQLELKTNIGSIPLGTALQALKNKRAFAFTKAGFLNFQHCLFQFLKQFI
SSQKCLIPENTLIATVTDIFKLDALAPLSTHEKIQASESDLAFFSQLKAA
CLPPIPQSLFSTDHKLRPYQNSGLLWLWFLYNHRLSGLLCDEMGLGKTHQ
ATALLDIVFQSAEPTERPKFLVVCPTSVLPHWEHTLATHLPTVSIFSFHG
PNKPEHLPPADVIITSYGTLRQNYAKFYKLSFTVTVFDEIHMAKNKSSQI
HKILCRLDSQMKLGLTGTPIENNLLEFKGLLDIILPNYLPSDALFKKLFT
KKHTAEVDDEIIPSQDLLLKLTRPFILRRTKKLVLPELPEKVESIIPCTL
SPEQKKLYLSTLKREKAQIQQLESPEEQTVNYLHVFALLNHLKQICNHPA
IFFKNPDKYREHESGKWEAFVRLLHDSLSSGYKVVVFSQYIHMIRIIMLY
LEEIGVKYASIQGKSLNRKEEIEYFTTDPECRVFVGSLLAAGTGINLTAG
NVVIMYDRWWNPAKENQALDRVHRIGQKNTVFIYKLMTEDTLEERIHYLI
EKKIRLLDKVISTQDSNILHMLNREDLITILSYKDERGGVDETLSNTSEE
DEVSLF
>CAB176 putative exonuclease
MASKDNSSVSSPIWIYPKHDPALLSFIIKEFHLHPVAAQTFISRGFQTID
EVRDFLYVHLSNLHDPELLLDMSKAVQRLLLAKERREHVMVYGDSDVDGI
TGVALLVEFLRSIEIKVSYCFLGAFLKHYGELSLLIAKMKEEGVTLLITV
DCGITAGKEVSDINKQGIDVIVTDHHMPTGKIPHCVATLNPKLRDHAYPN
KDLTGVGVAFKLARGVVDALQKNHPKLKLDIQHLLDLVSLGTVTDVGTLL
GENRTMVRHGIKEIAKGSRLGLHKLCIFSGVNPSEVTSTDIVLKISPKLN
SLGRLADASKGVELLLTKDPEVADDIIQYLDKINRERQKIEADVFHDVQK
ILKNHPDIVKQAAIVLSSQDWHSRVIPIISARLAKAYNKPVAIISNQGGV
GKGSLRTIGSFPLLGILQKCSPMFISYGGHDFAAGIIINEDRIEAFRKKF
IHLVNSSLKKEKAVVTLPLDARADFDEIDHDLLSSIDLFEPFGKGNPVPI
FYTIVHQVRYPKLLPGNHLKLYLNYGERNLEGIAFGLGDRIGALKASWNQ
PLELAYTPRLSQSANGGVIHLLVRDFHILPLNYKDTTAKF
>CAB007 putative UvrD/REP helicase
MKPFDIFHPQTSIQGKYFLEASAGTGKTFTIEQIVLRALLEGSVSHVENI
LIVTFTNAATNELKLRISENLKQAGAQLKSAITDPEQPLPPYLHHPCDVK
LLYMQVRNALATIDRMAIFTIHGFCNYVLQQHFPEIQISQKNSALTHSQA
VLHHIRKYLSQDLWENILFPEQFYLLAARYNSHGKHTSFLTDKLLSSYTA
QTFDHLPSKSTTASLLNTWHSSIRSKINAIPKEKFLEQALKYTESFRKQP
FSITEDLVSFIEHLYAAETSVRLFSFSKIAETFHPKNRLARYQPCHAFSY
IEETSWFQYTEQFCNVDTIFNTLLHDVQVYLKNHYTWWLSPDESIVTLED
LLHSSQAEEVIPSLRKRFQLILIDEFQDTDRKQWNIFAKLFAHKDFSGSL
FLIGDPKQSIYEWRNADLVTYLKAKSTFPKTSQLHLINNYRSTPQLMQAI
NILFCKCSPFLEIPGYEPIEYHSLTPQSLEYFDNTEHAPIHFFSYDNVLD
QAAWISQTAAHLQATHGIPFGRMAILVSDSAQAFDLITHCSIPVSFFKNK
SIFHLTETYLLTLAWLEAIFYPENYEKIQRVLLSSLFRHDLNDVLEKKEH
YSSYFFSLRSYIFDHGLLATFYHFMTLHGEALLKTPQGDLTFQEMERLCA
YLGTISSQPQHQLLYLQYFSETGRWEENLSFSSYSEDTEILKITTIHASK
GLEYDIVFCPGLDKSKKNKSSSEWIREMYVACTRAKKQLFIPFQTSLSTR
RNTALTNYVNQDGSHASILDLAKNLSKEHPSLFSLSTTNTQDRSTWPIYH
ITPPATFALSSYPTKQIFSFSSVKTMLDNEVLLDSDMEISSISSALPRGR
KTGILIHKILENISPNFKIPMSKIFTTVLHFVKNTHLEGYEEIISEKLFS
TISSPLSFTSASFALKDICPDKILSEEAFLFSNKDQLWQGAIDLFFEHQG
KYYIIDWKTSFLGETSSKYSQENLFSYIKEHNLDYQGAIYIHAAKRFLQQ
FDITSDVEMGFVFIRGTDSSGNGFFCLPNYKTSNPTINQKYPVYH
>CAB621 putative exodeoxyribonuclease
MEKISGKLESVLFEDHDSKETAARMRIPYKGTMIVIKGQFPDSFLQLGMQ
LHLYGKWSENPHLGKYFQVYSCDSQEMRDNRGIINYLTSRLIKGIGPKIT
EKIIEKFRNDTADILDNQPERLIEIPGISQTRCDSLCEQLREQKNLRTTL
LFLQQYNIAIHYGVKIYKKYKENSIEKICEDPFLLAREMEGIGFKTADLI
ATRLGVPLNSQSRLCAGIQYSLEELQEDGHTCYPLQSLAQLVEKLLNQDI
PEKLIRIEEIISQVYTMQEKNLLHIQELENTPYVWAKHIYLAEKTVVSDL
KRILFSSRKIRPIDSNKAIQWVEENLSIHLEHNQKEAIRACFSEKIHIIT
GGPGTGKSTITKAILKIFEQVTYKIILAAPTGKAAKRMTEITGKHSVTIH
ALLQYDFKTRSFRKNYENPIDCDLIIVDESGMMDTYLLYHFLKALPDHVI
VIFIGDVHQLPSIGPGNILKDIINSKKITVTQLNKIFRQVHDSNIIINAH
KVNEGEFPILYSESGRKDFLFFQKEDPQEAVDHIVHLVTQFIPKKYHIYP
KDIQILAPMKKGVLGIHNLNRVLKSALNPKQATLHGRFHSYAVGDKVMQI
RNNYNKEIFNGDIGYISMINFENKRVVVNMEGKYVVYSFSELDDLVLAYA
TSVHKYQGSESPCIILPIHTSHFMMLYRNLLYTAITRGKQLVVLVGTKKA
IAIATRNDKVQHRCTGLLQALEQLTQPQSSGT
>CAB760 putative TMH-family membrane protein
MFEIMNDISLLKNSEQTSVNTLPTYSSKKQLLIHTTLIAISVVFILTHVI
AVSAFASLLPSFVVVLSGISIILGLVFLGLRLKHIFAHSWKTKTIDSSTR
DEHHATVQKLLAEIQDLQNKALDYKNEAAEMKNEYDSLLQGCIEDRATYL
GNEDAWRSENKELEACITELKDYIAALQQMNEDCDTRLQEE
>CAB134 conserved hypothetical protein
MKILAGKYKGKSLKTFSNPSVRPTCGVVKEAVFNICSVYVEDARFLDLFA
GVGSVGFEALSRGAASVTFVDSSAQSVRLIRANSQLLHPNLPITIIKQEA
RSAIQRLAKKNMSFDLIYIDPPYNLEDSYLAAVLRDIVVGGILDKHGCLF
LENASMEPILVEGLIRKRSRKLGGTCLSEYVFEDSSN
>CAB898 putative DNA repair protein
MGNRDCIKNFILSTLNELFPDPQPSLTGWETPFQLLVAIVLSGNSTDKAV
NAVTPRLFSLAPDAQALVQLPLEDLYFIISPCGLGRRKAAYLHHLAQILL
EKYHGEPPASLELLTQLPGVGRKTASVFLGIIYKIPTFPVDTHILRLSQR
WGISNKRSPSAAEKDLVLFFGEANSPKLHLQLIYYAREYCPALYHDTNKC
KICAYLIRRSYEKKTNKTL
>CAB008 conserved hypothetical protein
MNATKHSQAIFSNSPIHLLAKLAEDLFSTYQQPFTKRWILVANTEIGHWL
RRELTNATSNHIFMGSTIFSSSDSLIKHLFTEVCHEKPLIPDYITLPLFI
HELLKTSAATPNILQNPSFLSEPSYSSTKHLAAIFKKFYTFSQAPSENNR
YHKDLFSQLEKHFMPMGKVFASILSSVKVKKQNRSLHIFGYSHLPRHFAT
FFTKLSNFFPVYFYCFSPSREYFGDLLSDKSIDFLWRQLIDQPNRDAWQH
YVLTDRQALLANLSHKSQASQNFFLDKEIHYSEVFIPPQETTSLGVVQSN
LFHLKPSSHENIADKKQTITISKALSPSREVQEVFSKISILLHQGVRPEE
IFILSSQLEIYEVYLKAVFSPHLPLYCCNNTSSHAEDLKEKLLLLSSILQ
TQGNLYRLLQLLTHPQLQNPIDPSKTPYLLNKLSSEWEKLYKGDGTHLQH
LGDNILHDYPFVEECGKVSQVELWERILPLLYDLQKFLDLYASTTIKSYE
EHCNHILSFLESLFILSPEELSFITSLRNALFPAFSSSECSLKFFTDFCL
DFFSRFCANSPLYDKPGPYVGTLGDLSLIPKGYTFILGANKQKQAIDLLD
LVDASTEEELVFSSSEDEENFHFLQVIVSTKYELHMSYPSSAHNPALPSA
YIHYLQEALQLPVSHLPTKAYIPSLFADTTLVHTSQEHYYKLAQAFCSKK
EPLPSLFQTPDTTPNLPDHLSVSQIIKAIFSPLDFFLKSNYQISLRSPTV
LESREKLFPTKKHILMFWENRLSNTSEDHTYNYLSSFSEAMFTYYDDLIA
QWLNTVRLNPLTAPYTVLFSSSLFHDHLADQDQVLSPVSLTLNNSELYLH
GNFSGVFSKGIYLCSIDPTAKTRKTVRKTKSILENPADMKNYLKAYIAIA
MLQKSGVLSEHAVIRNILSQEVFEDLPLPFSHPDNYLHQVLRVYQMMRDF
PIPLISSDCWKFLDNAEKFHEAIHTAIEADVNNPSLSTFWKFHNRDYKEQ
FTVSEEQRLLILSLFKGAHETV
>CAB396 putative single-strand DNA binding
MFGYFVGYLGADPEERMTSKGKRVVVLRLGVKSRVGTKDETVWCKCNIWH
NRYDKMLPYLKKGSGVIIAGDISVESYMSKDGTPQSSLVISVDTIKFSPF
SRSETRSPATEENVSHVSYDNVSIGFEGESLDTEAIADKDMYAGYGQGQQ
YISEDVPF
>CAB358 chromosomal replication initiator protein
MLTCSDCSTWEQFVNYVKTRCSKTAFENWISPIQIIEETQEKIRLEVPNI
FVQNYLLDNYKQDLCSFVPLDAQGEPALEFVVAEIKKAPPQPVAPREQQE
TPIETFEESKDFELKLNTAYRFDNFIEGPSNQFVKSAAVGIAGRPGRSYN
PLFIHGGVGLGKTHLLHAVGHYVREHHKNLRVHCITTEAFINDLVQHLRL
KSIDKMKNFYRSLDLLLVDDIQFLQNRQNFEEEFCNTFETLINLNKQIVI
TSDKPPGQLKLSERIIARMEWGLVAHVGIPDLETRVAILQHKAEQKGLHI
PNEIAFYIADHIYGNVRQLEGAINKLTAYCRLFGKTLTETIVRDTLKELF
RSPSKQKVSVESILKSVATVFQVKLQELKGNSRSKELVLARQVAMYLAKT
LITDSLVAIGSAFGKTHSTVLYACKTIEQKIEKDETLTRQISLCKNHIVG
>CAB235 putative 3-methyladenine DNA glycosylase
MLPESFFLNDDVLYLAKELLGHVLVTHLEGQRTSGIIIETEAYRGPEDKA
CHAYNYRKTQRNLPMYSRGGIAYIYRCYGMHSLFNVVTGHQDLPHAVLIR
AILPYEGEDIMVLRRQWQNKPKHLLTNGPGKVCQALNLTLEYNTHSLSSP
QIHISKKKFSGTITQKPRIGIDYAQEYRDLPWRFLLHIKN
>CAB405 conserved hypothetical protein
MKSERLKKLESELRDLTQWMQLGLVPKKEIDRHKEEMRSLENKIHEEKER
LQLLKENGEVEEFVTPRRSPAKTVYPDGPSMSDMEFVEATETEIDIDPSE
TVEIDLHDEDREEGAAEIDDSSDDDEDPFSDRNRWRRGGIVDPDANEW
>CAB342 putative inner membrane protein
MSEQYPIYHSPRLNQIEIGKSFLDHHPKAARSLQIVGIVLAILAVVSSVF
LVVATPIGLPISMALGGVFLGIGGSMLFTSINSLANSMKKAAIEKKRQNL
LIQQRSQEIEIEGHQTQENIWSKYNKMVDRFAHLNMSVSQHEKSVLKHLG
REEGRELMENLDQITGDYIACTSLLEGRQEVYSEEDFAQKEDSYPTSMRK
NDLLIKLGNSIVSKLSQGGGVFALKLQPLSKTMSKVHAGVTLGLVAGGIA
AVGVIAACIPGGILALPLIVASAIGIGLAILGLSYAIKTILKRSKTNKKQ
LLKDLKSEIDIDALKDVARHQHVLLGMLKTSLQTDQRMTLGHKDFYEDYN
KVRDTLQRLNEHLDEMEFKYKYASESYQRRADSLEKTIQQLSDNKNALEE
EMYYPQVPVADRAGLLSDTAGFDELVAQGVKAARERRQKDQRGEVFIGDY
SQYLEEDDLAFGDGWSPSGKRALETMWSAKPTVMNEEDYLILNEDVNKVL
RSYRSDILRIKEDIAPIDNLFKELKAGKQRIEVFSEEIINVWYNVSSNCQ
EILNHLVGMQMRLVSLVEQDLTEYSS
>CAB843 putative transcription-repair coupling factor
MPMDFDPVNLNLSILSEITNTSVPLLIENILPGARSFLAAKLFHERKESV
VMITTRSRIDDLFEDLASFLGFPPVEFPSSEIDLSPKLVNIDAVGKRDKI
LYDLYQKKAPIFCVTTLKALLEKTRSPKDTAHQHLDIQVGDVLDPDIMID
LCKNLGYRHETLASDKGEFAYRGGIIDIFPLSSQEPFRIEFWGEKIISIR
PFNPSDQLSTGKVSQLSISPATKDSGTEVLSHCLLDYFATPPTFLFDNLT
MLEDDFSDISGTLSSLPNRFLPIQDLCQRAFQSQTIFFEEKNFPNVRTIK
HNTVNIEVFHCDVQASRLVAPFIYPNEILDEQTNPLLGFLQKLQEYLPSQ
GQPFNVALYNTKAKALKEARALIETLGQNSIHIYEKSGNLSSSFALVNER
FAAISLAEFASTKVLRRQKQRNYFSVTTEEVFVPIPGETVVHLHNGIGKF
IGMEKKPNHLNIETDYLVLEYADKARLYVPSDQAYLISRYVGISDKTPDL
HNLNGSKWKRSRDLSEKSLVLYAEKLLQLEAQRSTTPAFIYPPHGEEVIK
FEESFPYEETPDQLKAIEQIYSDMMSDKLMDRLICGDAGFGKTEVIMRAA
VKAVCDGQRQVIVMVPTTILANQHYETFTQRMAGLPINIAVLSRFSEGKA
LKKIFEDTAQGNVDILIGTHKLINKNLEFKNPGLLIIDEEQRFGVKVKDF
LKERYPTIDCLTVSATPIPRTLYMSLSGARDLSLITMPPLDRLPVSTFVL
EHNEETVSAALRHELLRGGQAYVIHNLIESIFRLGNTIRTLVPEARIAVA
HGQMSSDELASIFQKFKDKETNILVATALIENGIDIPNANTILVDHADKF
GMADLYQMKGRVGRWNRKAYCYFLVSHLDRLSGPAAKRLQALNKQEYGGG
MKIALHDLEIRGAGNILGTDQSGHISAIGFNLYCKLLKKTVAALKNNSSP
LLFNDDVKIEFPYKSRIPDTYIDLASLRIEFYQKIGGAEDAEQLDFIKEE
MRDRFGPLPEEVLWLFALAHLRLFALQHNISSIKGTGNALYIQQRHGKTE
QIKKTLPYSLSPTPELLVSEVLESIEKAFPLKTPR
>CAB647 putative serine/threonine-protein kinase
MQHYDIIRMIGKGGMGEVYLAYDPICSRKVALKRIREDLSDNELLKKRFL
REAKIAADLVHPGVVPVFTICSDSDLVYYTMPYIEGYTLKSLLKSVWQCD
SLPKDLAEQTSVGTFLSIFHKICSTIEYVHSRGILHRDLKPDNILLGLFS
EVVILDWGAALSKEMKEDVLLDLDIPMPGSMFSNMTVPGKIVGTPDYMAP
ERLRGAPASESTDIYALGVILYQMLTLSFPYRNKKGKKIHVPNHIISPEE
VAPHREIPSFLSQVVMRALATDPKERYTSVQALKADIEQHLQGSPQWTPK
IALHTQDAECWKFHESILLSKYFPMLEVSPALWYSLAISKIESFSEVRLE
YTLLRKGLEGGFGILLPPSENVDHGDFYRGYGFWLHIKKNVLSVSLVRNG
LEIQKTSGNIDVNQEKFFIAFEKQNHRLSLNIDHTVWMIHMDYLPGRGGR
IGVIIQDITDVCGNIVVLESSGALHVSCLAVPDAFLNEKLYDRAITFYRR
IVESFPGRKEGYEAQFRIGIAVLEKAAEEGDQEGFSQALREFSVLHDSVA
APLEYLGKALVYQRLEEYNEEVKSLLLALKRYGQRPEISRVRDHVVDRLH
EALYSNHRVSLVFMLLALHVAPESINSSEEEHFLKNLQGKIHDTLFCSLD
ISPIDFRSSKMELLLSYWSGFTPFLPGLFQRSWDLKDYRALADIFYTAAD
LGEREFIDVYGNTLRENIQATTFTEDIVEIFPHQLIHFLSALDAIFLHAP
VEKIFSDVDILDPVLIIYLFDLFAKDVLIHGKGEQILDAIQVLETYVSPQ
QRHTYLLPYEILAYLWMKEGKKVHELLSAHYDESFWIEDSHWAFVLYGYW
LALTEESSLAYLHLSGCREDHVAPRALIGLFCSPLGICENQWSYQERRNL
LLQKFIFFHCLGDDVERDNCRVAYDLLVKERLL
>CAB026 putative DNA gyrase subunit A or topoisomerase IV subunit A
MHDVSELFKTHFMHYASYVILERAIPHILDGLKPVQRRLLWTLFCMDDGK
MHKVANIAGRTMALHPHGDAPIVEALVVLANKGYLIDMQGNFGNPLTGDP
HAAARYIEARLSPLAKEILFNTDLMSFHDSYDGRDKEPDILPAKLPLLLL
HGVEGIAVGMTTKIFPHNLCELIEAQIAILNNRAFTLLPDFYSGGVMDAS
EYQDGLGSITMRASIQTVDQKTLIIKEICPSTTTETLIRSIENAAKRGVI
KIDSIQDFSTDQPHIEIKLPKGVYAKDIIEPLFQYTECQVVLTSRPTAIY
NNKPVETSISEILKLHTEVLEGYLQKELEILQDELAQEHYYKSLEYIFIK
YRLYDTVRANLSKLKNTVSQEDLHAAVLTALAPFLSSLPTIPSKQATGQL
ASLAIKKILCFNENRYTKDLAAIEKKQAAVNKDLSNMKKFTIKYLKGLSA
KYGELGKRKTQVLSFSKQKKSILKQQTLV
>CAB312 putative integrase/recombinase
MVSAFYAFLDYLKNIKTASPHTLRNYCIDLNSFKTFLEKHGELTPSPPIC
LLTKERQEAELPFSLLTKDTVRLYILKLMQENKAKRTIKRRLSAIKSFSQ
YCVKQRILPDDPTETIQGPRLPKELPSPITYEQVEILMATPDLSKYTGLR
DRCLLELFYSSGLRISEIVAINHWDIDFTSHLIRIRGKGKKERLVPITPH
AAQWLQHYLTHPARTSIEKDAQAIFLNRFGKRLTTRSIDRKFQKYLRQSG
LSGHITPHTIRHTIATHWLENGMDLKTIQALLGHSSLETTTIYTHVSMKL
KKQTHNESHPHS
>CAB399 putative DNA-binding protein
MQDYTCFQDFSKFYKEKAPHLTVIGSNSEEDRRVCVELLVSGKAQEMDAL
GLTISDLSQWTESYGLFASREVVSIFQAEKLSSQTRDFLARYARNPHPHL
TLILFTTKQSFFQSLRKELPSAVFLSLFGEWQSDAEKRMAILLSQKASLL
GISCSLALASAFIKKFPQAEMHNLLGEFHKLLCCLGKKQVLEYNDIENFV
VKQEQVSLWKLRDAVFQRNTSASQAMLQALLHEHGEEPLGLIAFLRGQCL
YGLRSLEEAAGDRKHRFFVAYGKERLYQALSYLFYAESIIKNNAQDSIIA
METLLIRMTSI
>CAB143 ada, putative DNA methyltransferase
MSENLYLVSDDSKFSLSQACSQGLQIAKYPPLQVIVHFQNNAVVKTELSV
SPVFSCLFLGPGSHKAMEEIVLLCAKYSQKIDMPRSSYINTSILKKQQEM
ILNCVATIPFGQTHTYGDIAQATDTHPRTVGAVCKQNPFLLFFPCHRVIG
SHGERHYCAGKQIQDILLNFEGSIS
>CAB459 dnaA, chromosomal replication initiator protein
MRAWEDFLLLQEKEIGTSTVDKWLRSLKVLCFDACNLYLEAKDSFQVTWF
EEHIRHKVKTSLVNNNGKLIRVHVTSLDKTTPFYKEKQMQQEKTAYFTMQ
YGNVNPEMTFANFLVTPENDLPFRILQEFTKPSEDATGFPFNPIYLFGPE
GSGKTHLMQAAVNVLRESGGKILYVASDLFTEHLVSAIRSGEMQRFRSFY
RNVDALFIEDIEVFSGKGATQEEFFHTFNSLQTEGKLIVISSAYAPADLK
AMEERLISRFEWGVAVLIHPLTKEGLRSFLMRQTEQLSIRIEDSALDFLI
HALSSNMKALLHALTLLSKRVAYKKLTQQLLYEDDIQSLLHDVLEAAESV
RLTPSGIVHAVAKYYGVSPESILGRSQSREYVLPRQVAMYLCRQKLSLSY
VRIGDVFSRDHSTVISSIRAISQKVEEGGHDISIATQDLMKYLTSAYKSL
EFFPEEEIPC
>CAB123 dnaB, putative replicative DNA helicase
MHLDHVIKIMSTQIEKTPPPTLPSPPNSKESEMIVLGCMLTGVNYLNLAA
NQLNEDDFYYLEHKIIFRVLQDAFKHDKPIDVHLAGEELKRRNQLAVIGG
PSYLITLADFAGTAAYIEEYIQIILSKSILRKMIQTAKEIEKKAIEEPKD
VAVALDEAQNALFKISQTTSLSQYVLVADKLQGLTSSQDKPFLIQLQEKQ
EFFQQYAQSDDALPISGIPTHFIDLDKMINGFSPSNLMILAARPAMGKTA
LALNIAENMCFQNQLPIGIFSLEMTVDQLIHRIICSRSEVESRKINVGDL
SGQDFQRIVSVVNEMQQHTLLIDDQPGLKVTDLRARARRMKESYDIQFLI
IDYLQLLSGSGTLRSVESRQTEISEISRMLKTLARELNIPILCLSQLSRK
VEDRTNHRPMMSDLRESGSIEQDSDLVMFLLRREYYDPNDKPGTAELIVA
KNRHGSIGSVPLVFEKELARFRNYAAFEFNG
>CAB075 dnaE, putative DNA polymerase III alpha subunit
MTRGLLVTWIPLHCHSQYSILDATSSIKSFVAKAKEYQIPSLALTDHGNL
YGAIEFYKECQQNDIKPIIGCEVYVAPSSRFDKKKEKKSRVAHHLILLCK
NELGYRNLCLLSSLAFTEGFYYFPRIDRELLSQHAEGLICLSACLSSSVA
QAALESEEALEKDLRWYQNLFGEDFYSEIQLHKMSEEKIASLGEEWLKHE
YYQFIDSQTKVNQAVLDASKRLGIRSVATNDIHYIHADDWLAHEILLNVQ
LGETIRIAKQNTYIPNPKRKTFRSREYYFKSPEEMARLFADHPETITNTL
EVADKCNLHLNLSSKHYPIYVPEFLKSKQNYTEEERYAASAAFLRELCEK
GLSTKYTPEKLAHISKKFPDRDPLELVKERLEMEMSIIIPKGMCDYLLIV
WDIIYWAKDNGIPVGPGRGSGAGSVMLFLLGITEIEPIRFDLFFERFINP
ERLSYPDIDIDICMAGRERVINYAIERHGKDNVAQIITFGTMKAKMAVKD
VGRTLDVPLSKVNHIAKHIPELNTTLAKALETDPHLNELYTNDAEAAQVI
DMAMRLEGSIRNTGVHAAGVIICGDRLTNHIPICISKDSTMITTQFSMKP
VESVGMLKVDFLGLKTLTSIHIAMRAIEKKTGKLLEMASLPLDDKTTFAL
LHQGKTMGIFQMESKGMQELAKNLRPDSFEEIIAIGALYRPGPMDMIPSF
INRKHGKEIIEYDHPLMESILKETYGIMVYQEQVMQIAGSLASYSLGEGD
VLRRAMGKKDIDQMLKERTRFCERARKNGIDAELATTIFDKMEKFASYGF
NKSHAAAYGLITYTTAYLKANYPKEWLAALLTSDSDDIEKIGKLIHEAHS
MDICILPPDINESGTDFVATDKGIRFAMGAIRGIGKGLVESIIEEREKHG
PYQSIRDFIQRSDLKKVTKKHTENLIDAGCFDVFEPDRDVAQATLESLYD
SISKEKKEAATGVMTFFSLNAMHQKHPIPLTPATNVVRRSKKDILKKEKE
LLGIYLTEHPMDAVKDILPRLSVVSPGEFANLPHGAVIRTIFIIDKVTTR
ISSKGQRKFALLRVNDGVDSYELPIWPEMYAEQQDLLEEDRLIYAILSID
KRSESLRLSCRWMRDLSLINEDLIQECDDMFDKIKSQMQKMSYLNLETNK
DTNQGKTSTMSKSTDHRSQAPIVKLSLDLEQLRHSHLCTLKQIIRKYPGS
RTLSLVFTKNNERVATISPDADYFVSEDTSGLQKDLENSQLPVRFIAV
>CAB085 dnaF, putative DNA polymerase III epsilon chain
MTLLKDTVFVCLDCEMTGLDVKKDRIIEFAAIRFTFDSVIDSMETLINPD
RVISAESQRIHHISDAMLKDQPRIAEVFPKIKSFLKEGDYIVGHSVGFDL
QVLSQEAERIGETFLSKYYIIDTLRLAKEYGDSPNNSLEALAVHFNVPYD
GNHRAMKDVEINISIFKHFCKRFRTIEQLKQMLSKPIKMKYMPLGKHKGR
CFSEIPLSYLQWASKMDFDPDLLFSIRHEIKHRQKGIGFTQVNNPFIGL
>CAB431 dnaN, DNA polymerase III, beta chain
MKFVVSRNELGNLIKKIQSVVPQNTPIPVLTHMLIETCNDELVFTATDLT
VSTRCVAQAKVYESGAISIPSKRFFQLVKELTEANLEISATTGEMAKITS
GSSCFRLLSMGKEDFPMLPDIQNSVRFTLPAEQLKEMLQRTSFAVSREES
RYVLTGVLLTIANGTATVVGTDGKRLAKTDIEVSLDKSFTGDYIIPIKAV
EEIIKLCSEDSEASIFLDQAKIAVECGNTLLITKLLSGEFPDFSPVISTE
SSVLLDLHREELITLLKQVALFTNESSHSVKFTFTPGELTLTANCTKVGE
GKVSMAVNYSGELLEIAFNPFFFLDILKHSKDELVRLGISDSYNPGIITD
STRSLFVIMPMRLHDD
>CAB371 dnaQ, DNA polymerase III, epsilon chain
MTTLIFYDTETTGTQIDKDRIIEIAAYNHITKESFVTYVNPEIPIPEEAS
KIHGITTSTVISAPKFPEAYKHFCEFCGNDAVLVAHNNDSFDFPLMEKEC
RRHALEPLSLKTIDSLKWAQKYRPDLPKHNLQYLRQVYGFAENQAHRALD
DVITLHNVFSALIGDLSAEQVLALMEESYHPKTFKMPFGKYKGKPLSEVP
PSYIQWLENQGNLDKDMKAAIDLMKQLT
>CAB327 dnaX, DNA polymerase III subunit gamma/tau
MTSATYQVSSRKYRPQTFAEMLGQDAVVTVLKNALQFQRVAHAYLFSGIR
GTGKTTLARIFAKALNCKELTPEHEPCNQCCVCKEISSGTSLDVIEIDGA
SHRGIEDIRQINETVLFTPAKSQYKIYIIDEVHMLTKEAFNSLLKTLEEP
PSHVKFFLATTENYKIPSTILSRCQKMHLKRIPETMIVDKLASISQAGGI
ETSREALLPIARAAQGSLRDAESLYDYVIGLFPTSLSPELVADALGLLSQ
DTLATLSECIRTQKYAEALLPVTTAINSGVAPITFLHDLTVFYRDVLLNK
DQGNSPLSAIAMHYSSECLLEIIDFLGEAAKHLQQTIFEKTFLETVIIHL
IRICQRPSLETLFSQLKTSTFDTVRNVPQQQEPSKPSIQPEKHYQDQSFL
TSPSPTPKVQHQKEASPSLVGSATIDTLLQFAVVEFSGILTKE
>CAB494 gyrA, DNA gyrase subunit A
MLNKEEIIVPKNLEEEMKESYLRYSMSVIISRALPDVRDGLKPSQRRILY
AMKQLNLTPGAKHRKCAKICGDTSGDYHPHGESVIYPTLVRMAQNWAMRY
PLVDGQGNFGSIDGDPAAAMRYTEARLTHSAIFLMEDLDKDTVDMVSNYD
ETKHEPVVFPSKFPNLLCNGSSGIAVGMATNIPPHNLGELIEATLLVLSK
PDVSIEEILEVMPGPDFPTGGLICGSEGIRSTYYTGRGKIKVRARLHVEE
NADKHRENIILTEMPYNVNKSRLIEQIADLVNDKTLSGISDVRDESDKDG
IRVVLELKKGESSEVVINRLYKFTDIQVTFGANMLALDKNLPRTMNIHRM
ISVWVRHRTEVIRRRTRYELNKAEARAHILEGFLKALSCLDDVVHTIRNS
ESKEHAKHQLIEKFGFTEHQSIAILELRLYQLTGLEAEKIQKEYDELVNK
IAYYKRVLADEGLVKDIIRNELQELQKLHKTPRRTTIEFDADDIRDIEDI
ITNEPVIITISGDDYVKRMPIKVFREQKRGGHGVSGFDMKKGSDFLKAVY
SASTKDYLLIFTNFGQCYWLKVWQLPEGERRAKGKPIINFLEGIRPGEQL
AAVLNIKNFENAGFLFLATKHGVVKKVALDAFSNPRKKGIRALEIDDGDE
LIAAVHITSEEEKVMLFTRLGMAVRFPHDKVRPMGRTARGVRGVSLKNEK
DRVVACQIVRDDQSVLVVCDNGFGKRSQVEDFRETNRGGVGVRSILINER
NGDVLGAISVTDHDSILLMSAQGQAIRINMQDVRVMGRSTQGVRLVHVKE
GDTLVAMEKLSLNEDETLTNIEEESASPQV
>CAB027 gyrB_2, putative DNA gyrase subunit b or topoisomerase IV subunit b
MATYTEASVVSLASLEHIRLRAGMYIGRLGDGSQVEDGIYTLFKEVVDNA
IDEFIMGYGKTLVIFSDDSTITVRDSGRGIPLGKMIECVSKINTGAKYTQ
DVFHFSVGLNGVGLKAVNALSEKFTVRSVRKKKYHYAIFHKGILQDSRQG
STKDPDGTEITFSPDPTIFTNFSFNDEFLRKKIHRYTYLHPGLEIIYNNE
AFVSQQGLLDLFKEEIPEETLYPPLAFHNAELSFLFSHLDTHTERYFSFV
NGQETIDGGSHLAAFKEAIVKGINEYFGKNFTSNDIREGIVGCIAIKIAS
PIFESQTKNKLGNTQIRSGIIKEVKSAIIQELKKNKSYADLLLDKIKLNE
KTRKNIQFIKQDLKDKQKKLHYKIPQLRDCKFHYNERSLYGEASSIFVTE
GESASASILSSRNPLTQAVFSLRGKPMNVFSLEEEKVYKNDELFYLATAL
GITKNSTQHLRYNKIILATDADVDGMHIRNLLITFFLKTFVSVVENHHLF
ILETPLFKVRYKDTTLYCYSDQEKTQAIQKLGKKEAHLEVTRFKGLGEIS
PKEFKTFIGADMRLTPVTISSSESLESLLQFYMGKNTKERKQFIMDNLIT
NV
>CAB493 gyrbB, DNA gyrase subunit B
MDAKEKNYDASAITVLEGLQAVRERPGMYIGDTGITGLHHLVYEVVDNSI
DEAMAGYCSEIHVRILEDGGITISDNGRGIPIQTHEKESKKQGRDVSALE
VVLTVLHAGGKFDKDSYKVSGGLHGVGVSCVNALAEKLVATVYKDKQAYQ
MEFSRGVPVTSLQCLGATNKQGTEITFYPDNKIFSSCVFDRSILIKRLRE
LAFLNRGVTIIFEDDRDVSFDKVVFFYEGGIQSFVSYLNQNKESLFPEPI
YISGSRTGDDGEIEFEAALQWNSGYSELIYSYANNIPTRQGGTHLTGFST
ALTRVLNAYIKAHNLAKNDKLSLTGEDIREGLTAVVSVKVPNPQFEGQTK
QKLGNSDVGSVSQQITGEALTIFFDENPQIAKMIVDKVFIAAQAREAAKK
ARELTLRKSALDSARLPGKLIDCLEKDPAKCEMYIVEGDSAGGSAKQGRD
RRFQAILPIRGKILNVEKARLQKIFQNQEIGTIIAALGCGIGSDNFNLSK
LRYRRIIIMTDADVDGSHIRTLLLTFFYRHMTALIENECVYIAQPPLYKV
SKKKDFRYILSEKEMDDYLLTLGICDSKLVFKNGDREISGEALDSFVKLI
LNIENFIVALEKKAVPFSEFLEMRKETVGYPLYYRPPQSGKQGGRYFYSS
EEKEEEMVSGEDSDSTKVIELYKTSIFAEIQEELRNYGLDIRHYLNPKDS
EMVITNEDAKTLPYTCYTLKEVIEHLKALGRKGIEIQRYKGLGEMNADQL
WDITMNPEQRTLVRVSLKDAVEADHIFTMLMGEEVPPRREFIENHALSVK
MNNLDI
>CAB365 ihfA, integration host factor alpha-subunit
MATMTKKKLISTISQDHKIHPNHVRTVIQNFLDKMTDALVKGDRLEFRDF
GVLQVVERKPKVGRNPKNATVPIHIPARRAVKFTPGKRMKRLIETPSKHS
>CAB589 ligA, putative DNA ligase
MQSTYSREQYISLCKDIEEDDYRYYVLHNPTISDYDYDMKMRQLLSIEAQ
HPEWKVLWSPSMRLGDRTSGSFPIVAHAHPMLSIANAYTLEELYEFFSRI
EKTLGYTPKYTLEIKIDGIAVAIRYEQRVLVQALSRGNGRKGEDITANIR
TIRSLPLRLSKEAPEFLEVRGEVFFSRATFCQINAAQRQAEKPEFANPRN
AAGGTLKLLSAKEAAQRNLEISIYGSLAEENKRSHYENLLLCKEWGFPVF
GQPRQCQTIEKVVASLHEIEVARAQLPMEIDGVVIKVDDIEDQKVLGMTA
KHYRWALAYKYAPERAETILEDIIVQVGRTGVLTPVAKLRPVVLSGSRVS
RASLYNEDEIERKDIRIGDTVYVEKGGEIIPQVVGVCLEKRPEGTQPWVM
PEYCPVCHQKVTRESDKVSVRCTNSLCSAGVIEKIRFFCGRDALDIDHLG
EKVVTKLFDLGCIHRRCDIFQITEEDLRQVPGFKDKSIRNVLKSIEKAKS
VPLDRFITALGIPYVGIGGANALAQHFLSLESVMAASLDDLKAIEGIGDK
VAESIVAYFHQPEHLEEIQKMLSLGVHILPCHRASSSCLGKAFVITGTLE
KLTRSEAETYIRNCGGKVGSSVSKNTDYLVVGQDPGSKLKRAQELGVPIL
SEDELLKLLY
>CAB920 mutL, DNA mismatch repair protein MutL
MAVRPRIQLLDTVTINQIAAGEVIENAVSVVKELVENALDAGADEIEVET
LGGGQGLIVVKDNGCGMSSDEVTLALKRHATSKIEEFSDVFSLSSFGFRG
EALPAIASISKMEILSCPKGEEGSRTIIHGGEVIAAEAKPRQLGTTISVD
SLFYNVPVRRGFQKSPQTNRIAMRKLLENRILSLESVGWSWISERQQEFH
ILKHQGLAERVAFVMGEGFMQEALRVDRVEEPIRIVGFLGSPCFHRPTRL
GQRIFINDRPVDSPLISKQISEAYTMLLPPQRYPVFVLKLYLPPQWCDFN
VHPQKTEVRILKEEFVREFLSESIGEVLARSQESSSYKKTSLTLPTLRFF
DGQLPEISLEQPRESMSLPVTQLATPSIRSISSLGCQQEIPAVDTQTEIV
WGESQEVRFLTSLGKIVLAEDSEGVHAIFTEAARKHLFYLSLIENQQEHY
KSQSFLVPLCLEVTPQERVFLLSHIEEFKQLGIEISQIGPCVFAIESAPT
FIGEEELKSWILSLAAESHTKVDKKAIALLIKESLTQTIFGKTLRTFDIS
WLSLLWQIGKPEKAFDGTLIRRLILDEDFIKE
>CAB798 mutS, putative DNA mismatch repair protein
MTSKKTTPMMKQWHQCKEKAGESLLLFRMGDFYEAFYDDAIVLSQNLDIT
LTQRQGIPMSGIPVSTINGYIDRLVSKGFKVAVAEQLDEAQDNKGKSEPL
SRELQRFITPGTLLSSSLLPEKANNYIVSINRVGALFGLACLDFSTGSFL
LQEYDNMKDLVDEICRLAPTEILSCDKFYKKHADIIEQIQQHLKLTLSTY
ADWAFEHQFATQKLSLHFHVSSLDGFGLKGLVPAINSAGALLSYLQDKLL
LPVEHISIPKTQGNQKHLLIDTASQVNLELLTPIHDPQGKSSLLHVMERT
STPMGGRLLRNTLVNPFYDQKEILLRQDAVEFLLDRSELRKNLKSLLSQV
RDLERLTTKITTSLAGPKDIGMLRDSLNASIRVCEVLSPLPLPKFFQGRF
TLPIGLTSLSELLSRALLGELPLRISEGNIFCDNHHPDLQRLRYTKEHSK
EWLWQYQETIRQQTGVKKLKVCYSQALGYYIEVSSDFAPLLPKEFIRRQS
RLHAERFTTEKLQEFQDDMLNISDKLQTLETQLFKDLCAQILQQREEILS
LSQVIADIDYILSLSDLAAEYNYCRPIVDTSDSLSISGGIHPVAQTLLDK
GTFIPNDIKMHSTRTRMILITGPNMAGKSTYIRQIALLVIMAQMGSFIPA
KSAHIGMIDKIFTRIGAGDNLSKGMSTFMVEMAETANILHNATDRSLVIL
DEVGRGTSTYDGLAIAQSVVEYLLFTEGKKAKTLFATHYKELTDLENHCP
HVENFHASVKENGGQPVFLYEILKGHSQKSFGIHVAKLAGFPLCVISRAQ
QILRQLEGPEATSKQPQEKELQLTLF
>CAB380 mutY, putative A/G-specific adenine glycosylase
MTKIAFSERAKNFPIGKLKQWFIENKRSFPWRDDPSPYNVWVSEVMLQQT
RAEVVVKYFIEWMKKFPTIESLATANEEDVIKAWEGLGYYTRVRNLLHGA
RMVMTDFGGKLPDDPLDLMQIKGLGPYTVHAILAFAFKRRTAAVDGNVLR
VISRVFLIDASIDLESTKTWVFRIVLSFLPAEDPQVIAEALIELGACICK
RAPKCDICPLQSICGAFKEGRQKSLPVRHARKKTVTLFRWVAIVLYNDCI
VLEQRKPEEMMAGLYEFPYIEVKSLEDLSDIDGLVHDMEEYVQAPLVFAG
ELEEQRHAFTHYKVHLIPKIFYAKSKPKAELLYPLDSIDSLPFSSGHRKI
KAWLLEHPYATFHSELIQV
>CAB127 polA, putative DNA polymerase I
MRKVFILDASGFVFRAYFALPDMKNSSGEGTQAVFGFIRSMNKLIKEFSP
KHMVAVFDGPNNKQSRREIYADYKIHREKQDENLYQQIPIVKEYCHLLGL
RYLEIEGVEADDVIASITKQAVSEGCEVCLCTADKDLLQLVGPNVVAWNP
WKAGPPIDENSVVDIYGVPPSRIADYLALVGDTSDNIPGVSGCGPQKATA
LLQKYHSVEGILEHLDELTGSTHKMISEQKDVLLLSKDLAVLDNNVPLPM
GISGFAFPLHEVPQEEINTFYMRHGFKTLVQPVEEASNIDIEIIHSCQPL
VRVLSTLQGKSVAFSVGYKGNFLPSLTLMGVALACDEQVYYVDIEHAQDD
VITPLRDFFKRKDTEFYGYNIKRDNHALKNAGIHIHNITLDLALAEHLIN
GGAKISYQTLLVDHGLVESAGKYGKEWGQLSLPILKSPAKPAEYFGEFVS
HLPKIKKSLLEELKVKGLEDLFFNMEMPLEKVLFTIERNGMPLDVEDLQE
LERTLSEELAILTDDIYTVAGTSFNIKSPKQLSDVLYNKLGLTPIDKARS
TKAEVLAALLGEHEIVEKILAFRAIEKLLSTYVKALPRQIDPHTSRIHPT
FNQMGTVTGRLACQDPNLQNIPIRSERGRLLRKAFCDTRQNNYFLSADYS
QIELRFLAHLSQDESLRLAFASREDVHTFTASQVFHVPLEEVTKQQRMQA
KTVNFGIIYGQQAYGLSKILKISVSEAQKLIDAYFDRYPAVARFINETIN
EACENLRVKTLLGRERIIDNWTEFSNSRAASGRLAVNTRIQGSAAELIKL
AMLQLAAALEKRKLRSRMLLQIHDELIFEVPEEEKEEVQTLVRDIMESAM
ILSVPLVVNILIGKNWAEC
>CAB965 recA, recombinase A
MNVPDRKKALEAAIAYIEKQFGSGSIMSLGKHSASHEISTIKTGALSLDL
ALGIGGVPKGRIVEIFGPESSGKTTLATHIVANAQKMGGVAAYIDAEHAL
DPSYASLIGANIHDLMISQPDCGEDALSIAELLARSGAVDVIVIDSVAAL
VPKSELEGDIGDVHVGLQARMMSQALRKLTATLARSQTCAIFINQIREKI
GVSFGNPETTTGGRALKFYSSIRIDIRRIGAIKGNESFDLGNRIKVKVAK
NKLAPPFKTAEFDILFNEGISSAGCILDLAVEHNIVEKKGSWFNYQDRKL
GQGREAVREELKKNKKLLEELEKRILEVTASPKTIVEEKKEELAMQPVA
>CAB975 recD, exodeoxyribonuclease V alpha chain
MLSLSPDVSHLLHDVVQQQIVLPLDLAFAKHHISAESKKAFAFLAISSAL
WRCGYPFLSIENERLFPSISGISETLFYEYFRALPHDVLSSLFVIENNKI
YLKSLYTVREKLFKKLSLLSQATNRYSLTTPTLPSLSQEQNKVFHKAVNR
CFSLICGGPGTGKTFLAVQIIIALIKQYPKIRIAIVSPTGKATSHIRHIL
SKHHISEASVTIQTIHRFLQEHAYHQCTSFDLLLVDEGSMVTLSLLHSLV
NTLSGENKRGEILADNLIILGDENQLPPIGVGAGNPLQDLIVRFPERALH
LHVSHRAKTHRVQDFAKAILERQAIPFTPLPPMLTALSRIKEAFIHTPSS
QTQLCVLTPMRHGPWGYLRLNELIFHEIQKTHPELPIPIMITKRYEAWGL
FNGDTGYLCPKTQKLFFSHSRVIDAKEFSYYTYNYAMSVHKSQGSEYEDV
IVILPKGCETFDISILYTAITRAKNNIDVWADRETLYKIIKKPHKYTYGV
DRLP
>CAB430 recF, DNA replication and repair protein
MNILSLRLKNFRNYKEAEVSLSPNINYIFGENAQGKTNLIEALYVLSLGR
SFRTSHLTEAIFFGSSYFFLEMTFEKDGVPHTLSTYVDKHGKKIFCDQSP
IKTLSQLIGMIPIVLFSAKDRCLIAGAPSDRRLFLNLLLSQCDPQYKHSL
SYYHRALLQRNTLLKTKQTSTLSVWDEQLATLGSYLCLSRYTCCAQLNQL
IQTLWNNSLSERLFIKFKSSLIKQCKISQEAVKNELHKQLTASLHRDLEL
GNTSVGPHREDFTLMINDLPVAQFSSEGQKHSLLAVLKLAESLYIKSLHN
VYPLFCMDDIHAGLDNQRISQLLGLAPSLGQTLITSTTLPHQTLSEANRI
FSVNQAQISIHSHAIIK
>CAB150 recO, DNA repair protein
MHTLTPAITLKTLPQGKHHCITTIFSPLGLLTFFAKQGQSLYYDFREALI
PLSLGVYNLDHSPPKMRKLLFAEVKNTFTTIKSELPLLQAAGKMTQSILG
SQWQEKPSQELFSLFLNFLHRLPESKNPEMFAATFLLKLLQYEGILDLST
TCAACKKTILSASFYRHKGRKFCIEHSPESAVMIENEEEKILHALVHAKR
FQDLLHLSNFHLEFSEKITLMFDSVFHEDKHKKLPQSNGSA
>CAB469 recR, recombination protein
MLKYPDYLSKLISLLRKLPGIGFKTAEKLAFELLDWDKDQLESMGKAFSE
LSAARSHCPTCFCLKSHPESVCSFCQNNRDTSILCIVATPKDIFSLERSQ
IFQGHYYVLGALLSPITGRHIDAERMHLLKQRIEFLKPKEIILALDATLE
GDATALFLKQELSHSSASVSRLALGLPIGLSFDYIDSGTLARAFSGRNPY
>CAB625 rnhB, ribonuclease HII
MNTLAMDAEQLFLSKTIFEEEVFHEGFSLIAGIDEVGRGPLAGPVVAGAC
ILPRGKVFAGVNDSKKLTPKERGKIRDILVNDSEVYYGLGVVSVERIDEI
NILEATKEAMAAAIANLPIHPDFLLVDGLHLPHKIPCKKIIKGDSKSASI
AAASILAKEYRDDLMRELHQLYPDYGFDKHKGYGTAAHLAALKAFGPCDC
HRKSFAPVRQVF
>CAB291 rnhC, ribonuclease hIII
MSTPFVTTLSPSLHGLLKDRLEEKGFIFTQPQHTIFQARSPSVSCTLYNS
GKLVVQGKGAQEFIDFFLEPEILLTFTHNRMEKDLRPRLGVDESGKGDFF
GPLCIAGVYARDAETLKNLYKTKIQDSKMLNDNQILALAKTIRACSTYDV
MILYPEKYNELYAKFHNLNLLLAWAHATIIDQLAPRPSGEVFAISDQFAS
SESVLLQALRKKSTDISVIQKVRAEQDIVVAAASILAREAFIHTITKLEQ
RFSVKLPKGASAHVKSAGKTILNTQGKEILSLVCKTHFKTFYEICDSTDI
>CAB119 ruvA, putative holliday junction DNA helicase RuvA
MPRAYFCIYLFGSSIMYDYIRGVLTYISSSTMVIESQGLGFSIFAPERWL
IELSSQLHRELIVYTYTVVRETEHVLYGFHTRGERECFRMLISFSGVGPK
TGLAILNTFSLSQLCSIARAEDIKAIASVPGIGKKTAEKLMVDLKQKLAD
LLPLDAQILASWEPAKPSCMEEGIQALAALGYPKSSAERMIAEAMSELPD
HASVAEILPIALKKNLQGLNKI
>CAB392 ruvB, holliday junction DNA helicase
MTHQVSVLHQDKKFDVSLRPKGLKEFCGQAQLTERLELFLNAAIQRGEVP
GHCLFFGPPGLGKTSLAHIVANTVGKGLLVASGPQLVKPSDLLGLLTSLQ
EGDVFFIDEIHRMGKVAEEYLYSAMEDYKIDITIDSGPGARSVSVDLAPF
SLVGATTRSGMLSEPLRARFSFTGRVAYYSDEDLATILRRSSNLLGIDAD
ASALYEIARRSRGTPRLANNLLRWVRDFAQMREGNCINSDVAEKALAMLL
IDEWGLNEIDIKLLTTIMNYYQGGPVGIKTLSVAVGEDVRTLEDVYEPFL
ILKGLLKKTSRGRMVTQLAYNHLKRCSDNLQSLGEEK
>CAB118 ruvC, putative crossover junction endodeoxyribonuclease RuvC
MIMGIDPGTLVSGYAIILVEQRYKIRAHSYGAIRLSSKDSLTQRYKQLFQ
TLSGVLDNVTPDAVVLETQYVHKNPQSAIKLGMGRGVLVLAAALRDIPVF
EYTPNVAKRAVVGKGNASKQQVQLMVSKILNIPDVLNSDCEDIADAFALA
ICHAHTSAYTCLGVR
>CAB571 ruvX, putative Holliday junction resolvase
MSNPQVAKVFLGVDYGERRIGLAYAAYPLGISLPIGFIATGKTLEATAKL
LVGIIQERRVSTVVLGNPLPMQKGQKSALQEDILKLSSLLQESCPVEVIL
WDERLSSAQAERMLKGDCGLSRKKRKGKTDSIAATLILTSFLEHSPRLPS
>CAB958 topA, DNA topoisomerase I-fused to SWI domain
MKKSLIVVESPAKIKTLQKLLGKGFIFASSLGHVVDLPAKEFGIDIEQDF
EPDYQILPDKQEVISQIRKLASSCDIVYLSPDPDREGEAIAWHIANQLPK
HTRIQRISFNAITKGAVNEALKHPREIDMALVNAQQARRLLDRIVGYKIS
PILSRKLQQRSGISAGRVQSVALKLVVDREKAIEAFVPTEYWNIRVFLQD
PKTSTTFWAHLYSAEGKKWEKELPKGKTEDEILLIQSEAQAQHYVALLED
AAYRVTRVEVKEKRRNAAPPFITSTLQQEASRHFRFSSSKTMSVAQTLYE
GVELDNEDATGLITYMRTDSVRIDPEALSNVRDYIHNTFGQEYLPKSPNV
YTTKKMTQDAHEAIRPTDIHLSPDKLEGKLSDDQLKLYSLIWKRFVASQM
NPAIYDTLAMTISTNVKIDLRASGSLLKFKGFLAVYEEKLDDDTTEEENL
SLPQLHAQDVLDKEKVSAEQAFTKPLPRFTEASLVKELEKSGIGRPSTYA
TIMNKIQSREYTIKENQRLRPTELGKIISQFLETNFPRIMDIGFTALMED
ELELIADNKKSWKLLLKEFWDQFLPVVTAAEKEAVIPRVLTDITCSACHK
GKLVKIWAKNRYFYGCSEYPECDFKTSEEELAFNKDDYAVDTPWNSPCPV
CGGDMKVRHGRFGTFLGCLNYPQCRGTISIHKKGEEVEKEETLPCPAVGC
SGKILKKRSRYNKTFYSCSEYPDCSVIGNTIDAVITKYTGTPKTPYEKKT
TGKKKATTKSSSKTTKTTTKKKKSEGKTPKTPKAGALLTPSPQLALMIGP
EPLGRGEATKKVWQYIKDHNLQSPENKKMLLPDDKFAAIIGPEPVDMFQL
PKLLNQHLFKSDVSPGSSSASS
>CAB954 ung, uracil-DNA glycosylase
MQNAFTIDQLPLSWQEQLENEWSQPYMYKLREFLQSEYSQKTIYPAKDNI
FTALKSTPFDSVRVVILGQDPYPGEGQAHGLSFSVPQGVRLPPSLVNIFS
ELHADVGVKNTTGCLQSWADQGILLLNTVLTVRAGSPFSHAGQGWEQFTD
AIITKLIENRSHVIFVLWGNAARKTCDLLFRSTHKHAILAAAHPSPLAAH
RGFFGCSHFSKINYLLKKLNKPMINWKLP
>CAB931 uvrB, UvrABC system protein B UvrB
MTFELRAAFSPCGDQPEAIAKLTQGVRNRTPSQVLLGTTGSGKTFTIANV
VANVNRPTLVLAHNKTLAAQLYQEFKEFFPNNAVEYFISYYDYYQPEAYI
ARNDTYIEKSLLINSEIDKLRLSATRSILERRDTLIVSSVSCIYGIGSPE
NYTSMALELTVGTEYPRALLASQLVKMHYQASSVPQRSTFRERGSVIDIF
PAYESELAIRLEFFNDTLTSIDYSDPLTMMPKESVTSVILYPGSHYVTPE
AVREQAIRSIREELEERLAFFQDRPIEQDRLFHRTTHDIEMIKETGFCKG
IENYSRHFTNTPPGAPPTCLLDYFPEDFLLVIDESHQTLPQIRAMYRGDF
SRKQSLVEYGFRLPSAYDNRPLTYEEARKYFHNVIYVSATPGETELNESQ
GHIVEQILRPTGIPDPIPEIRPATGQVDDLLEEIRKRLSKSQEKILVISI
TKKLAEDIAAFLSELDIAAAYLHSGIETAERTRILSDLRLGNIDVLIGVN
LLREGLDLPEVSLVAILDADKEGFLRSTSSLIQFCGRAARNVDGKVIFYA
DHKTLSIEQTLKETERRRHIQLEYNKANNITPKPIIKAIFANPIPQGGKK
AVQDTPQKPLSTQELEKLIKKYENLMLQAANAFRFDEAAQYRDKMKAAKE
QLLYLS
>CAB799 uvrC, putative nuclease
MRVEDFTPKLIPASPGVYLMKDSSGEVLYIGKAKNLRNRISTYFRKDGDS
RERIPFLMKKTTDIETILVSNETEAFLLENNLIKKYHPKYNVLLKDDKTF
FCLAISLTHLWPKIDVVRTKAVTSSKKQIIFGPYVSAEACRTLLEVISQW
FPLRTCSNREFASRKRPCILYEMKRCLAPCVNLCSHEEYEQTLDKAVLFL
KGQISEIVQDLEKSIEKASKEQKFEQAGMYYRTLKLIQQAMEKQHVEKFH
FQNIDAIGLYRKYQKTVITVLTIRSGKLLGARHFPFSENAQEDADVLSSF
ILQYYTNQPQTPKEILTPIPLNIPDLPSLLNKDTPPQLRSPKTGYGRELL
NLAKNNAQVHAETTIQSSALPYEELKKILKSPDYPYRIECYDNAHLQGSH
AVGVYIVYENDALSPKDYRTFSISSSAYNDLAAFHEVLSRRFISLTSSIP
DMILIDGGRTQYAQAKKTLKELNLTGIQVVSIAKEAGNHSGSLKNEKLFC
DTFPQGVLLPPTSKLLQFFQKLRDEAHRFALSRHRKKRHKDFLLPKEKIP
GIGEIKRKRLLQKFKSWEQVMKASQGELEAIPGLTKKDIQHVLAKQAEDT
YLED
>CAB955 uvrD, DNA helicase II, UvrD
MLTSELNEAQIAAVTSPLSPILVLAGAGAGKTRVVTCRILHLINEGIAPK
EILAVTFTNKAAKELKERILHLCPQAHGSDIPMVCTFHSLGVFILRRSIQ
ALNRENNFIIYDQSDTDKLLKQCLQKFNLKKTLSSSIQYHISQAKNRLLS
PEDLDPEEYIDPVVSIYKEYQQRLHEANALDFDDLLFLTVRLFQEFPEVR
KEYSELWKALLIDEYQDTNHAQYKMAQTIAGKHQNIFAVGDPDQSIYSWR
GANIHNILNFEKDYPRALVLRLEDNYRSYGNILNAANALIQNNASRLKKD
LRSVKGPGEKIRVFLGKTDKEEAEFVADEISRLHRRSQIPLSDICIFYRT
NFQSRTFEDALLRRRIPYEILGGLSFYKRKEIQDILAFLRMFTAKSDVVA
FDRTVNLPKRGLGPSTISSLIEYALTNNLPILEACNNVLQTQEVKLSKKQ
QEGLREYLSIFQQLEHAYATLPLNEFVVATIRITGYFQVLKEDPDTFEDR
KSNLDELASKTFEWEQQNTDGTLENFLDDLALKSSTDDTELIADRVNLMT
IHNGKGLEFRIAFVVGLEENLFPHANSKSSYENLEEERRLCYVGITRAQD
LLYLTAAQTRFLWGTVRVMKPSRFLKEIPRDYLIQVH
>CAB304 xseA, probable exodeoxyribonuclease VII large subunit
MATSSPPQAVTTLTESIKNLLESNFCHIVVKGELSNVSLQPSGHLYFGIK
DSKSFLNGAFFHFKSKYFDRRPKDGDSVIIHGKLTVYAPRGQYQIVAHAL
VYAGEGDLLQKFEETKKRLAAEGYFSIEKKQPLPRIPKCIGVITSPTGAV
IQDILRILSRRCYQYKVLIYPVTVQGATAAKEISQAIEVMNRDKLVDVLV
IARGGGSIEDLWAFNEEIIVKAIDASTIPIISAVGHETDYTLCDFAADVR
APTPSAAGEIVCQSSQEQIQIFKSHLRYLNAHAQQLLAGKAKQIQQWKRY
LDHVDFFRPPHQSLDYLRVSIERSIQTTLSQSKQRYRQYTRWLQSDILQR
MTYRLQDLWKMINLAFQNRLLALKHHCVHIKKNLVIHNTQQYRQRFDPCR
DQIHRALSQRLGYFQQSLAHKQTLLKHFTTKINQLFIKETSALNLLKKRL
NKAFVYTVCERREHFLYAKENLFLSLNHLVERHRAKYHTVSQQLISLNPK
NVLKRGYAMLFDFNENSAIISAKSLHKHSCVRVRLQDGEATLTVTDVQNF
ETQEF
>CAB303 xseB, probable exodeoxyribonuclease VII small subunit
MEEITFEKAMERLEEIVDLMNQPSTSLDASLKFYEEADALMRICESRIRK
AEERVRELSEKRNEDFLSEEESFVH