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2024-05-16 01:46:32

Gene list

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COG category: Replication, recombination and repair
Organism: Ehrlichia ruminantium str. Welgevonden, Welgevonden

Number of genes found: 118

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Ehrlichia ruminantium str. Welgevonden, Welgevonden
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA ERWE_CDS_04640 Hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS741918 228 + 0.298246
NA ERWE_CDS_02480 Hypothetical proteinSubName: Full=Putative integral membrane protein; chromosome CDS398829 663 + 0.291101
NA ERWE_CDS_05910 Putative Holliday junction resolvaseRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS951728 471 - 0.271762
NA ERWE_CDS_05670 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS914104 828 - 0.312802
NA ERWE_CDS_00560 Hypothetical proteinRecName: Full=UPF0102 protein Erum0631/ERWE_CDS_00560; chromosome CDS73401 369 - 0.271003
NA ERWE_CDS_02780 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS456763 2739 + 0.260679
NA ERWE_CDS_01930 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS311820 693 - 0.278499
NA ERWE_CDS_08000 Putative MethylaseSubName: Full=Putative Methylase; chromosome CDS1276814 585 - 0.311111
NA ERWE_CDS_00250 Hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS29671 207 - 0.275362
NA ERWE_CDS_04030 Hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS666334 570 - 0.266667
NA ERWE_CDS_03080 Conserved hypothetical protein (putative deoxyribonuclease)SubName: Full=Putative deoxyribonuclease; EC=3.1.21.-; chromosome CDS507145 786 + 0.312977
NA ERWE_CDS_00440 Conserved hypothetical proteinSubName: Full=Putative uracil DNA glycosylase; EC=3.2.2.-; chromosome CDS57688 792 - 0.344697
NA ERWE_CDS_00830 Conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS130560 1020 + 0.276471
Erum0371 Erum0371 putative pseudogene (truncated exodeoxyribonuclease VII large subunit) chromosome pseudo48722 207 - 0.275362
Erum0372 Erum0372 putative pseudogene (exodeoxyribonuclease VII large subunit) chromosome pseudo48925 207 - 0.26087
Erum0530 Erum0530 putative uracil DNA glycosylaseSubName: Full=Putative uracil DNA glycosylase; EC=3.2.2.-; chromosome CDS77021 792 - 0.344697
Erum0631 Erum0631 conserved hypothetical proteinRecName: Full=UPF0102 protein Erum0631/ERWE_CDS_00560; chromosome CDS92734 369 - 0.271003
Erum0870 Erum0870 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS150161 1020 + 0.276471
Erum1180 Erum1180 putative integrase/recombinase XerD or XerCRecName: Full=Tyrosine recombinase XerC; chromosome CDS205948 939 + 0.284345
Erum1920 Erum1920 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS331827 693 - 0.278499
Erum2440 Erum2440 putative integral membrane proteinSubName: Full=Putative integral membrane protein; chromosome CDS418973 663 + 0.291101
Erum2730 Erum2730 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS476906 2739 + 0.260679
Erum3030 Erum3030 putative deoxyribonucleaseSubName: Full=Putative deoxyribonuclease; EC=3.1.21.-; chromosome CDS527287 786 + 0.312977
Erum3900 Erum3900 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS686489 570 - 0.266667
Erum4431 Erum4431 putative pseudogene (truncated DNA gyrase subunit B) chromosome pseudo762069 228 + 0.298246
Erum5410 Erum5410 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS934822 828 - 0.312802
Erum5640 Erum5640 putative Holliday junction resolvaseRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS972446 471 - 0.271762
Erum6590 Erum6590 putative integrase/recombinase XerD or XerCRecName: Full=Tyrosine recombinase XerC; chromosome CDS1112448 939 - 0.318424
Erum7170 Erum7170 putative methylpurine-DNA glycosylaseRecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS1221098 567 + 0.328042
Erum7590 Erum7590 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1298724 585 - 0.309402
dnaA ERWE_CDS_02930 Chromosomal replication initiator protein DNAARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS486450 1395 + 0.315412
dnaA Erum2870 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS506593 1395 + 0.315412
dnaB Erum5710 replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS985870 1461 + 0.322382
dnaB ERWE_CDS_06000 Replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS965149 1461 + 0.322382
dnaE ERWE_CDS_01870 DNA polymerase III alpha subunitSubName: Full=DNA polymerase III alpha subunit; chromosome CDS301487 3369 + 0.30187
dnaE Erum1870 DNA polymerase III, alpha subunitSubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; chromosome CDS321503 3360 + 0.302083
dnaG ERWE_CDS_03380 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS555112 1779 + 0.294547
dnaN ERWE_CDS_08330 DNA polymerase III, beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1323199 1128 + 0.309397
dnaN Erum7880 DNA polymerase III, beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1345111 1128 + 0.309397
dnaQ ERWE_CDS_05220 DNA polymerase III, epsilon chainSubName: Full=DNA polymerase III, epsilon chain; chromosome CDS828548 729 - 0.282579
dnaQ Erum4990 DNA polymerase III, epsilon subunitSubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7; chromosome CDS848673 729 - 0.279835
dnaX ERWE_CDS_09490 DNA polymerase III gamma and tau chainsSubName: Full=DNA polymerase III gamma and tau chains; chromosome CDS1499228 1503 + 0.264138
dnaX ERWE_CDS_03000 DNA polymerase III subunit gammaSubName: Full=DNA polymerase III subunit gamma; SubName: Full=Putative DNA polymerase III, delta prime subunit; EC=2.7.7.7; chromosome CDS492730 891 - 0.277217
gyrA Erum2420 DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS415358 2697 + 0.332221
gyrA ERWE_CDS_02460 DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS395214 2697 + 0.332221
gyrB ERWE_CDS_04430 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS715294 2397 + 0.303296
gyrB Erum4260 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS735447 2397 + 0.303296
hupB ERWE_CDS_02990 Putative DNA-binding protein HUSubName: Full=Putative DNA-binding protein HU; SubName: Full=Putative DNA-binding protein HU-beta; chromosome CDS492133 285 - 0.336842
ihfA ERWE_CDS_01050 Integration host factor alpha-subunitSubName: Full=Integration host factor alpha-subunit; SubName: Full=Putative integration host factor alpha-subunit; chromosome CDS169935 300 + 0.323333
ihfB ERWE_CDS_06450 Putative Integration host factor beta-subunitSubName: Full=Putative Integration host factor beta-subunit; SubName: Full=Putative integration host factor beta subunit; chromosome CDS1006912 264 + 0.268939
ligA Erum6940 NAD-dependent DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1173549 2025 + 0.298272
ligA ERWE_CDS_07290 DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1151929 2025 + 0.298272
mfd ERWE_CDS_07670 Transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1222852 3369 + 0.274562
mfd Erum7290 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1244758 3369 + 0.274562
mpg ERWE_CDS_07540 Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS1199192 567 + 0.328042
mutL ERWE_CDS_02150 DNA mismatch repair protein MutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS345072 2070 + 0.300483
mutL Erum2130 DNA mismatch repair protein MutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS365216 2070 + 0.300483
mutM Erum4330 formamidopyrimidine-DNA glycosylaseSubName: Full=Formamidopyrimidine-DNA glycosidase; SubName: Full=Formamidopyrimidine-DNA glycosylase; EC=3.2.2.23; chromosome CDS745913 810 + 0.261728
mutM ERWE_CDS_04520 Formamidopyrimidine-DNA glycosidaseSubName: Full=Formamidopyrimidine-DNA glycosidase; SubName: Full=Formamidopyrimidine-DNA glycosylase; EC=3.2.2.23; chromosome CDS725761 810 + 0.261728
mutS ERWE_CDS_02740 DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS447374 2415 + 0.303934
mutS Erum2700 DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS467517 2415 + 0.303934
nth ERWE_CDS_02470 Endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS397927 636 + 0.298742
nth Erum2430 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS418074 633 + 0.296998
polA Erum0490 DNA polymerase IRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS69066 2598 - 0.303695
polA ERWE_CDS_00390 DNA polymerase I (POL I)RecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS49732 2598 - 0.303695
possible holB Erum2940 putative DNA polymerase III, delta prime subunitSubName: Full=DNA polymerase III subunit gamma; SubName: Full=Putative DNA polymerase III, delta prime subunit; EC=2.7.7.7; chromosome CDS512873 891 - 0.277217
possible ihfB Erum6140 putative integration host factor beta subunitSubName: Full=Putative Integration host factor beta-subunit; SubName: Full=Putative integration host factor beta subunit; chromosome CDS1028201 264 + 0.268939
possible recO Erum4920 putative DNA repair protein RecOSubName: Full=Putative DNA repair protein RecO; SubName: Full=Putative DNA repair protein recO; chromosome CDS837890 735 + 0.253061
priA Erum5360 primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS923922 1980 - 0.297475
priA ERWE_CDS_05620 Primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS903204 1995 - 0.299248
probable dnaG Erum3310 putative DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS575253 1779 + 0.294547
probable dnaZ Erum0040 putative DNA polymerase III, gamma subunitSubName: Full=Putative DNA polymerase III, gamma subunit; EC=2.7.7.7; chromosome CDS5143 1464 + 0.260246
probable exoA Erum3810 putative exodeoxyribonucleaseSubName: Full=Exodeoxyribonuclease III; SubName: Full=Putative exodeoxyribonuclease; EC=3.1.11.2; chromosome CDS668689 837 + 0.291517
probable hupB Erum2930 putative DNA-binding protein HU-betaSubName: Full=Putative DNA-binding protein HU; SubName: Full=Putative DNA-binding protein HU-beta; chromosome CDS512276 285 - 0.336842
probable ihfA Erum1080 putative integration host factor alpha-subunitSubName: Full=Integration host factor alpha-subunit; SubName: Full=Putative integration host factor alpha-subunit; chromosome CDS189536 300 + 0.323333
probable recB Erum6250 putative exodeoxyribonuclease V beta chainSubName: Full=Putative Exodeoxyribonuclease V beta chain; SubName: Full=Putative exodeoxyribonuclease V beta chain; EC=3.1.11.5; chromosome CDS1042032 2574 + 0.277389
probable recF Erum0520 putative DNA replication and repair protein RecFRecName: Full=DNA replication and repair protein RecF; chromosome CDS75334 1119 + 0.286863
probable recJ Erum8550 putative single-stranded-DNA-specific exonuclease RecJSubName: Full=Putative single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; chromosome CDS1467707 1758 + 0.308305
probable recR Erum2570 putative recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS442689 588 + 0.304422
probable ruvA Erum6760 putative Holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1144838 576 + 0.274306
probable smf Erum2140 putative DNA processing protein chain ASubName: Full=Putative DNA processing protein chain A; SubName: Full=Smf protein (DNA processing chain A); chromosome CDS368495 1128 - 0.307624
probable xseB Erum7560 putative exodeoxyribonuclease VII small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; chromosome CDS1294433 189 - 0.291005
radC Erum6440 DNA repair protein RadCSubName: Full=DNA repair protein RadC; SubName: Full=DNA repair protein radC homolog; chromosome CDS1082789 693 + 0.305916
radC ERWE_CDS_06750 DNA repair protein radC homologSubName: Full=DNA repair protein RadC; SubName: Full=DNA repair protein radC homolog; chromosome CDS1061500 693 + 0.305916
recA ERWE_CDS_09010 RecA protein (Recombinase A)RecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1436018 1074 - 0.331471
recA Erum8500 RecA protein (Recombinase A)RecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1458249 1074 - 0.331471
recB ERWE_CDS_06560 Putative Exodeoxyribonuclease V beta chainSubName: Full=Putative Exodeoxyribonuclease V beta chain; SubName: Full=Putative exodeoxyribonuclease V beta chain; EC=3.1.11.5; chromosome CDS1020743 2574 + 0.277389
recF ERWE_CDS_00430 DNA replication and repair protein recFRecName: Full=DNA replication and repair protein RecF; chromosome CDS56001 1119 + 0.286863
recG ERWE_CDS_00310 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS36444 2034 + 0.297935
recG Erum0420 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS55495 2034 + 0.297935
recJ ERWE_CDS_09060 Single-stranded-DNA-specific exonuclease recJSubName: Full=Single-stranded-DNA-specific exonuclease recJ; chromosome CDS1445461 1773 + 0.307953
recO ERWE_CDS_05140 Putative DNA repair protein recOSubName: Full=Putative DNA repair protein RecO; SubName: Full=Putative DNA repair protein recO; chromosome CDS817765 735 + 0.253061
recR ERWE_CDS_02600 Recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS422545 588 + 0.304422
rnhA Erum7260 ribonuclease HIRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS1239485 441 - 0.351474
rnhA ERWE_CDS_07640 Ribonuclease HRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS1217579 462 - 0.348485
rnhB ERWE_CDS_01750 Ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS280074 663 - 0.297134
rnhB Erum1760 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS300081 639 - 0.302034
ruvA ERWE_CDS_07090 Holliday junction DNA helicase RUVARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1123437 576 + 0.274306
ruvB ERWE_CDS_07100 Holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1125167 996 + 0.336345
ruvB Erum6770 Holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1146568 996 + 0.336345
ruvC ERWE_CDS_00030 Crossover junction endodeoxyribonuclease RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS1552 483 - 0.310559
ruvC Erum0160 crossover junction endodeoxyribonuclease RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS20405 483 - 0.310559
smf ERWE_CDS_02160 Smf protein (DNA processing chain A)SubName: Full=Putative DNA processing protein chain A; SubName: Full=Smf protein (DNA processing chain A); chromosome CDS348351 1128 - 0.307624
ssb ERWE_CDS_02890 Single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS481351 534 - 0.314607
ssb Erum2830 single-strand DNA binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS501494 471 - 0.318471
topA Erum3400 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS590829 2460 + 0.315854
topA ERWE_CDS_03470 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS570688 2460 + 0.315854
uvrA Erum3110 uvrABC system protein ASubName: Full=UvrABC system protein A; SubName: Full=UvrABC system protein A (UvrA protein); chromosome CDS536881 2880 - 0.300694
uvrA ERWE_CDS_03160 UvrABC system protein A (UvrA protein)SubName: Full=UvrABC system protein A; SubName: Full=UvrABC system protein A (UvrA protein); chromosome CDS516739 2880 - 0.300694
uvrD Erum2390 DNA helicase IISubName: Full=DNA helicase II; EC=3.6.1.-; chromosome CDS408503 1920 - 0.3
uvrD ERWE_CDS_02420 DNA helicase IISubName: Full=DNA helicase II; chromosome CDS388359 1920 - 0.3
xerC ERWE_CDS_06910 Integrase/recombinaseRecName: Full=Tyrosine recombinase XerC; chromosome CDS1091158 957 - 0.314525
xerD ERWE_CDS_01150 Tyrosine recombinase xerDRecName: Full=Tyrosine recombinase XerC; chromosome CDS186192 939 + 0.284345
xseA ERWE_CDS_00260 Truncated exodeoxyribonuclease large subunit chromosome CDS29874 207 - 0.26087
xseA Erum0370 exodeoxyribonuclease VII large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; chromosome CDS47559 1167 - 0.293916
xseA ERWE_CDS_00240 Probable exodeoxyribonuclease VII large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; chromosome CDS28508 1167 - 0.293916
xseB ERWE_CDS_07960 Putative Exodeoxyribonuclease VII small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; chromosome CDS1272523 189 - 0.291005
xthA ERWE_CDS_03930 Exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; SubName: Full=Putative exodeoxyribonuclease; EC=3.1.11.2; chromosome CDS648534 837 + 0.291517