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2024-04-29 11:19:36

Gene list

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COG category: Replication, recombination and repair
Organism: Ehrlichia ruminantium str. Welgevonden, Welgevonden

Number of genes found: 118

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Ehrlichia ruminantium str. Welgevonden, Welgevonden
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA ERWE_CDS_04030 Hypothetical proteinchromosome CDS666334 570 - 0.266667
NA ERWE_CDS_02780 Conserved hypothetical proteinchromosome CDS456763 2739 + 0.260679
NA ERWE_CDS_08000 Putative Methylasechromosome CDS1276814 585 - 0.311111
NA ERWE_CDS_00830 Conserved hypothetical proteinchromosome CDS130560 1020 + 0.276471
NA ERWE_CDS_02480 Hypothetical proteinchromosome CDS398829 663 + 0.291101
NA ERWE_CDS_01930 Conserved hypothetical proteinchromosome CDS311820 693 - 0.278499
NA ERWE_CDS_05910 Putative Holliday junction resolvasechromosome CDS951728 471 - 0.271762
NA ERWE_CDS_00560 Hypothetical proteinchromosome CDS73401 369 - 0.271003
NA ERWE_CDS_03080 Conserved hypothetical protein (putative deoxyribonuclease)chromosome CDS507145 786 + 0.312977
NA ERWE_CDS_00250 Hypothetical proteinchromosome CDS29671 207 - 0.275362
NA ERWE_CDS_00440 Conserved hypothetical proteinchromosome CDS57688 792 - 0.344697
NA ERWE_CDS_04640 Hypothetical proteinchromosome CDS741918 228 + 0.298246
NA ERWE_CDS_05670 Hypothetical proteinchromosome CDS914104 828 - 0.312802
Erum0371 Erum0371 putative pseudogene (truncated exodeoxyribonuclease VII large subunit)chromosome pseudo48722 207 - 0.275362
Erum0372 Erum0372 putative pseudogene (exodeoxyribonuclease VII large subunit)chromosome pseudo48925 207 - 0.26087
Erum0530 Erum0530 putative uracil DNA glycosylasechromosome CDS77021 792 - 0.344697
Erum0631 Erum0631 conserved hypothetical proteinchromosome CDS92734 369 - 0.271003
Erum0870 Erum0870 conserved hypothetical proteinchromosome CDS150161 1020 + 0.276471
Erum1180 Erum1180 putative integrase/recombinase XerD or XerCchromosome CDS205948 939 + 0.284345
Erum1920 Erum1920 conserved hypothetical proteinchromosome CDS331827 693 - 0.278499
Erum2440 Erum2440 putative integral membrane proteinchromosome CDS418973 663 + 0.291101
Erum2730 Erum2730 hypothetical proteinchromosome CDS476906 2739 + 0.260679
Erum3030 Erum3030 putative deoxyribonucleasechromosome CDS527287 786 + 0.312977
Erum3900 Erum3900 hypothetical proteinchromosome CDS686489 570 - 0.266667
Erum4431 Erum4431 putative pseudogene (truncated DNA gyrase subunit B)chromosome pseudo762069 228 + 0.298246
Erum5410 Erum5410 conserved hypothetical proteinchromosome CDS934822 828 - 0.312802
Erum5640 Erum5640 putative Holliday junction resolvasechromosome CDS972446 471 - 0.271762
Erum6590 Erum6590 putative integrase/recombinase XerD or XerCchromosome CDS1112448 939 - 0.318424
Erum7170 Erum7170 putative methylpurine-DNA glycosylasechromosome CDS1221098 567 + 0.328042
Erum7590 Erum7590 conserved hypothetical proteinchromosome CDS1298724 585 - 0.309402
dnaA ERWE_CDS_02930 Chromosomal replication initiator protein DNAAchromosome CDS486450 1395 + 0.315412
dnaA Erum2870 chromosomal replication initiator protein DnaAchromosome CDS506593 1395 + 0.315412
dnaB Erum5710 replicative DNA helicasechromosome CDS985870 1461 + 0.322382
dnaB ERWE_CDS_06000 Replicative DNA helicasechromosome CDS965149 1461 + 0.322382
dnaE Erum1870 DNA polymerase III, alpha subunitchromosome CDS321503 3360 + 0.302083
dnaE ERWE_CDS_01870 DNA polymerase III alpha subunitchromosome CDS301487 3369 + 0.30187
dnaG ERWE_CDS_03380 DNA primasechromosome CDS555112 1779 + 0.294547
dnaN ERWE_CDS_08330 DNA polymerase III, beta chainchromosome CDS1323199 1128 + 0.309397
dnaN Erum7880 DNA polymerase III, beta subunitchromosome CDS1345111 1128 + 0.309397
dnaQ ERWE_CDS_05220 DNA polymerase III, epsilon chainchromosome CDS828548 729 - 0.282579
dnaQ Erum4990 DNA polymerase III, epsilon subunitchromosome CDS848673 729 - 0.279835
dnaX ERWE_CDS_09490 DNA polymerase III gamma and tau chainschromosome CDS1499228 1503 + 0.264138
dnaX ERWE_CDS_03000 DNA polymerase III subunit gammachromosome CDS492730 891 - 0.277217
gyrA ERWE_CDS_02460 DNA gyrase subunit Achromosome CDS395214 2697 + 0.332221
gyrA Erum2420 DNA gyrase subunit Achromosome CDS415358 2697 + 0.332221
gyrB Erum4260 DNA gyrase subunit Bchromosome CDS735447 2397 + 0.303296
gyrB ERWE_CDS_04430 DNA gyrase subunit Bchromosome CDS715294 2397 + 0.303296
hupB ERWE_CDS_02990 Putative DNA-binding protein HUchromosome CDS492133 285 - 0.336842
ihfA ERWE_CDS_01050 Integration host factor alpha-subunitchromosome CDS169935 300 + 0.323333
ihfB ERWE_CDS_06450 Putative Integration host factor beta-subunitchromosome CDS1006912 264 + 0.268939
ligA Erum6940 NAD-dependent DNA ligasechromosome CDS1173549 2025 + 0.298272
ligA ERWE_CDS_07290 DNA ligasechromosome CDS1151929 2025 + 0.298272
mfd Erum7290 transcription-repair coupling factorchromosome CDS1244758 3369 + 0.274562
mfd ERWE_CDS_07670 Transcription-repair coupling factorchromosome CDS1222852 3369 + 0.274562
mpg ERWE_CDS_07540 Putative 3-methyladenine DNA glycosylase (EC 3.2.2.-)chromosome CDS1199192 567 + 0.328042
mutL Erum2130 DNA mismatch repair protein MutLchromosome CDS365216 2070 + 0.300483
mutL ERWE_CDS_02150 DNA mismatch repair protein MutLchromosome CDS345072 2070 + 0.300483
mutM Erum4330 formamidopyrimidine-DNA glycosylasechromosome CDS745913 810 + 0.261728
mutM ERWE_CDS_04520 Formamidopyrimidine-DNA glycosidasechromosome CDS725761 810 + 0.261728
mutS ERWE_CDS_02740 DNA mismatch repair protein MutSchromosome CDS447374 2415 + 0.303934
mutS Erum2700 DNA mismatch repair protein MutSchromosome CDS467517 2415 + 0.303934
nth ERWE_CDS_02470 Endonuclease IIIchromosome CDS397927 636 + 0.298742
nth Erum2430 endonuclease IIIchromosome CDS418074 633 + 0.296998
polA ERWE_CDS_00390 DNA polymerase I (POL I)chromosome CDS49732 2598 - 0.303695
polA Erum0490 DNA polymerase Ichromosome CDS69066 2598 - 0.303695
possible holB Erum2940 putative DNA polymerase III, delta prime subunitchromosome CDS512873 891 - 0.277217
possible ihfB Erum6140 putative integration host factor beta subunitchromosome CDS1028201 264 + 0.268939
possible recO Erum4920 putative DNA repair protein RecOchromosome CDS837890 735 + 0.253061
priA ERWE_CDS_05620 Primosomal protein N'chromosome CDS903204 1995 - 0.299248
priA Erum5360 primosomal protein N'chromosome CDS923922 1980 - 0.297475
probable dnaG Erum3310 putative DNA primasechromosome CDS575253 1779 + 0.294547
probable dnaZ Erum0040 putative DNA polymerase III, gamma subunitchromosome CDS5143 1464 + 0.260246
probable exoA Erum3810 putative exodeoxyribonucleasechromosome CDS668689 837 + 0.291517
probable hupB Erum2930 putative DNA-binding protein HU-betachromosome CDS512276 285 - 0.336842
probable ihfA Erum1080 putative integration host factor alpha-subunitchromosome CDS189536 300 + 0.323333
probable recB Erum6250 putative exodeoxyribonuclease V beta chainchromosome CDS1042032 2574 + 0.277389
probable recF Erum0520 putative DNA replication and repair protein RecFchromosome CDS75334 1119 + 0.286863
probable recJ Erum8550 putative single-stranded-DNA-specific exonuclease RecJchromosome CDS1467707 1758 + 0.308305
probable recR Erum2570 putative recombination protein RecRchromosome CDS442689 588 + 0.304422
probable ruvA Erum6760 putative Holliday junction DNA helicase RuvAchromosome CDS1144838 576 + 0.274306
probable smf Erum2140 putative DNA processing protein chain Achromosome CDS368495 1128 - 0.307624
probable xseB Erum7560 putative exodeoxyribonuclease VII small subunitchromosome CDS1294433 189 - 0.291005
radC ERWE_CDS_06750 DNA repair protein radC homologchromosome CDS1061500 693 + 0.305916
radC Erum6440 DNA repair protein RadCchromosome CDS1082789 693 + 0.305916
recA Erum8500 RecA protein (Recombinase A)chromosome CDS1458249 1074 - 0.331471
recA ERWE_CDS_09010 RecA protein (Recombinase A)chromosome CDS1436018 1074 - 0.331471
recB ERWE_CDS_06560 Putative Exodeoxyribonuclease V beta chainchromosome CDS1020743 2574 + 0.277389
recF ERWE_CDS_00430 DNA replication and repair protein recFchromosome CDS56001 1119 + 0.286863
recG ERWE_CDS_00310 ATP-dependent DNA helicase RecGchromosome CDS36444 2034 + 0.297935
recG Erum0420 ATP-dependent DNA helicase RecGchromosome CDS55495 2034 + 0.297935
recJ ERWE_CDS_09060 Single-stranded-DNA-specific exonuclease recJchromosome CDS1445461 1773 + 0.307953
recO ERWE_CDS_05140 Putative DNA repair protein recOchromosome CDS817765 735 + 0.253061
recR ERWE_CDS_02600 Recombination protein RecRchromosome CDS422545 588 + 0.304422
rnhA Erum7260 ribonuclease HIchromosome CDS1239485 441 - 0.351474
rnhA ERWE_CDS_07640 Ribonuclease Hchromosome CDS1217579 462 - 0.348485
rnhB Erum1760 ribonuclease HIIchromosome CDS300081 639 - 0.302034
rnhB ERWE_CDS_01750 Ribonuclease HIIchromosome CDS280074 663 - 0.297134
ruvA ERWE_CDS_07090 Holliday junction DNA helicase RUVAchromosome CDS1123437 576 + 0.274306
ruvB Erum6770 Holliday junction DNA helicase RuvBchromosome CDS1146568 996 + 0.336345
ruvB ERWE_CDS_07100 Holliday junction DNA helicase RuvBchromosome CDS1125167 996 + 0.336345
ruvC ERWE_CDS_00030 Crossover junction endodeoxyribonuclease RuvCchromosome CDS1552 483 - 0.310559
ruvC Erum0160 crossover junction endodeoxyribonuclease RuvCchromosome CDS20405 483 - 0.310559
smf ERWE_CDS_02160 Smf protein (DNA processing chain A)chromosome CDS348351 1128 - 0.307624
ssb Erum2830 single-strand DNA binding proteinchromosome CDS501494 471 - 0.318471
ssb ERWE_CDS_02890 Single-strand binding proteinchromosome CDS481351 534 - 0.314607
topA ERWE_CDS_03470 DNA topoisomerase Ichromosome CDS570688 2460 + 0.315854
topA Erum3400 DNA topoisomerase Ichromosome CDS590829 2460 + 0.315854
uvrA ERWE_CDS_03160 UvrABC system protein A (UvrA protein)chromosome CDS516739 2880 - 0.300694
uvrA Erum3110 uvrABC system protein Achromosome CDS536881 2880 - 0.300694
uvrD Erum2390 DNA helicase IIchromosome CDS408503 1920 - 0.3
uvrD ERWE_CDS_02420 DNA helicase IIchromosome CDS388359 1920 - 0.3
xerC ERWE_CDS_06910 Integrase/recombinasechromosome CDS1091158 957 - 0.314525
xerD ERWE_CDS_01150 Tyrosine recombinase xerDchromosome CDS186192 939 + 0.284345
xseA Erum0370 exodeoxyribonuclease VII large subunitchromosome CDS47559 1167 - 0.293916
xseA ERWE_CDS_00260 Truncated exodeoxyribonuclease large subunitchromosome CDS29874 207 - 0.26087
xseA ERWE_CDS_00240 Probable exodeoxyribonuclease VII large subunitchromosome CDS28508 1167 - 0.293916
xseB ERWE_CDS_07960 Putative Exodeoxyribonuclease VII small subunitchromosome CDS1272523 189 - 0.291005
xthA ERWE_CDS_03930 Exodeoxyribonuclease IIIchromosome CDS648534 837 + 0.291517