TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-17 05:56:29

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Acinetobacter sp. ADP1, ADP1

Number of genes found: 123

Free access
Sort by:

 

Hide UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Acinetobacter sp. ADP1, ADP1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA ACIAD2799 hypothetical protein; putative conserved domainSubName: Full=Uncharacterized protein; chromosome CDS2745769 453 - 0.448124
NA ACIAD2014 putative helicaseSubName: Full=Putative helicase; chromosome CDS2005012 1713 - 0.394046
NA ACIAD0212 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS207853 483 + 0.449275
NA ACIAD2779 fragment of transposase's ORF2 chromosome CDS2726460 216 - 0.361111
NA ACIAD3064 putative DNA uptake protein and/or related DNA-binding proteinSubName: Full=Putative DNA uptake protein and/or related DNA-binding protein; chromosome CDS2990694 387 - 0.397933
NA ACIAD2780 fragment of transposase's ORF2 chromosome CDS2726672 255 - 0.439216
NA ACIAD0957 transposase for IS1236, orf2SubName: Full=Transposase of IS1236, IS3 family (ORF 2); chromosome CDS943626 858 - 0.432401
NA ACIAD2728 fragment of umuC chromosome CDS2673741 195 - 0.4
NA ACIAD3237 conserved hypothetical protein; putative MutT/nudix family proteinSubName: Full=Uncharacterized protein; chromosome CDS3153439 405 - 0.419753
NA ACIAD2200 putative integrase/recombinase proteinSubName: Full=Putative integrase/recombinase protein; chromosome CDS2168414 1023 - 0.437928
NA ACIAD0850 hypothetical protein; putative signal peptideSubName: Full=Uncharacterized protein; chromosome CDS839089 576 + 0.326389
NA ACIAD3596 putative ATPaseSubName: Full=Putative ATPase; chromosome CDS3513635 1272 - 0.441038
NA ACIAD2941 conserved hypothetical protein; putative membrane proteinSubName: Full=Uncharacterized protein; chromosome CDS2869298 2061 + 0.414362
NA ACIAD3070 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2996521 837 - 0.419355
NA ACIAD0579 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS570239 543 + 0.381215
NA ACIAD1792 transposase for IS1236, orf1SubName: Full=Transposase of IS1236, IS3 family (ORF 1); chromosome CDS1800473 309 - 0.407767
NA ACIAD0320 transposase for IS1236, orf1SubName: Full=Transposase of IS1236, IS3 family (ORF 1); chromosome CDS321630 309 + 0.407767
NA ACIAD1336 hypothetical protein; putative protein kinaseSubName: Full=Uncharacterized protein; chromosome CDS1333684 795 + 0.373585
NA ACIAD1135 putative NADH pyrophosphatase (NUDIX hydrolase family)(NudC)SubName: Full=Putative NADH pyrophosphatase (NUDIX hydrolase family)(NudC); EC=3.6.1.-; chromosome CDS1121639 750 - 0.402667
NA ACIAD2257 putative DNA exonuclease XSubName: Full=Putative DNA exonuclease X; EC=3.1.11.-; chromosome CDS2229020 699 + 0.393419
NA ACIAD1249 transposase for IS1236, orf2SubName: Full=Transposase of IS1236, IS3 family (ORF 2); chromosome CDS1248198 852 - 0.431925
NA ACIAD0332 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS327653 765 + 0.354248
NA ACIAD0820 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS810384 393 + 0.346056
NA ACIAD3091 conserved hypothetical protein; putative enzymeSubName: Full=Uncharacterized protein; chromosome CDS3017386 819 - 0.42735
NA ACIAD1132 conserved hypothetical proteinRecName: Full=UPF0102 protein ACIAD1132; chromosome CDS1119550 423 + 0.361702
NA ACIAD1858 putative phage replication initiation factorSubName: Full=Putative phage replication initiation factor; chromosome CDS1856146 1164 - 0.406357
NA ACIAD0953 transposase for IS1236, orf1SubName: Full=ORF1 gene product; SubName: Full=Transposase of IS1236, IS3 family (ORF 1); chromosome CDS942177 294 - 0.408163
NA ACIAD2484 conserved hypothetical proteinRecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS2447064 954 + 0.377358
NA ACIAD2782 fragment of transposase's ORF1 chromosome CDS2727343 195 - 0.410256
NA ACIAD2359 conserved hypothetical protein; putative deoxyribonucleaseSubName: Full=Uncharacterized protein; chromosome CDS2318379 774 - 0.419897
NA ACIAD2632 putative chromosomal replication initiator, DnaA-typeSubName: Full=Putative chromosomal replication initiator, DnaA-type; chromosome CDS2585389 708 - 0.413842
NA ACIAD1882 putative G:T/U mismatch-specific DNA glycosylaseSubName: Full=Putative G:T/U mismatch-specific DNA glycosylase; chromosome CDS1875207 585 - 0.37094
NA ACIAD0495 putative ATP-dependent DNA helicase (PcrA)SubName: Full=Putative ATP-dependent DNA helicase (PcrA); EC=3.6.1.-; chromosome CDS488419 2019 + 0.435364
NA ACIAD2864 putative methyltransferaseSubName: Full=Putative methyltransferase; chromosome CDS2799971 402 - 0.348259
NA ACIAD0248 putative DNA modification methylase (Adenine-specific methyltransferase)SubName: Full=Putative DNA modification methylase (Adenine-specific methyltransferase); EC=2.1.1.72; chromosome CDS247744 1296 + 0.447531
NA ACIAD1250 transposase for IS1236, orf1SubName: Full=ORF1 gene product; SubName: Full=Transposase of IS1236, IS3 family (ORF 1); chromosome CDS1249064 294 - 0.408163
NA ACIAD0379 putative DNA helicaseSubName: Full=Putative DNA helicase; EC=3.6.1.-; chromosome CDS371980 1503 - 0.448436
NA ACIAD0674 putative MutT/nudix family proteinSubName: Full=Putative MutT/nudix family protein; chromosome CDS668987 615 + 0.42439
NA ACIAD1847 putative phage replication initiation factorSubName: Full=Putative phage replication initiation factor; chromosome CDS1849100 1164 - 0.406357
NA ACIAD0134 fragment of transposase for insertion sequence chromosome CDS138808 168 + 0.422619
NA ACIAD2187 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2161436 369 - 0.425474
NA ACIAD1100 putative methyltransferaseRecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; chromosome CDS1090168 546 - 0.397436
NA ACIAD2781 fragment of transposase's ORF2 chromosome CDS2726933 252 - 0.424603
NA ACIAD3108 putative DNA polymerase III, delta subunit (probably ATP hydrolase) (HolA)SubName: Full=Putative DNA polymerase III, delta subunit (Probably ATP hydrolase) (HolA); EC=2.7.7.7; chromosome CDS3032008 996 + 0.450803
NA ACIAD0720 putative MutT/nudix family proteinSubName: Full=Putative MutT/nudix family protein; chromosome CDS704853 405 + 0.414815
NA ACIAD1222 putative Nudix hydrolaseSubName: Full=Putative Nudix hydrolase; chromosome CDS1225332 501 - 0.431138
NA ACIAD0352 conserved hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS345524 444 - 0.477477
NA ACIAD1964 conserved hypothetical protein; putative protein kinaseSubName: Full=Uncharacterized protein; chromosome CDS1950963 1530 - 0.41634
NA ACIAD2378 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS2337708 330 + 0.381818
NA ACIAD2185 putative replicative DNA helicaseSubName: Full=Putative replicative DNA helicase; chromosome CDS2159134 1329 - 0.472536
NA ACIAD0958 transposase for IS1236, orf1SubName: Full=ORF1 gene product; SubName: Full=Transposase of IS1236, IS3 family (ORF 1); chromosome CDS944492 294 - 0.408163
NA ACIAD0209 putative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf)SubName: Full=Putative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf); chromosome CDS204848 1152 - 0.450521
NA ACIAD3245 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome CDS3159264 1923 - 0.469059
NA ACIAD3414 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS3327660 330 + 0.333333
NA ACIAD1791 transposase for IS1236, orf2SubName: Full=Transposase of IS1236, IS3 family (ORF 2); chromosome CDS1799607 858 - 0.432401
NA ACIAD2254 putative tellurium resistant protein (KlaA/kilA)SubName: Full=Putative tellurium resistant protein (KlaA/kilA); chromosome CDS2225150 792 - 0.376263
NA ACIAD0321 transposase for IS1236, orf2SubName: Full=Transposase of IS1236, IS3 family (ORF 2); chromosome CDS321947 858 + 0.432401
NA ACIAD0952 transposase for IS1236, orf2SubName: Full=Transposase of IS1236, IS3 family (ORF 2); chromosome CDS941311 858 - 0.432401
ada ACIAD0344 bifunctional protein [Includes: transcriptional regulator of DNA repair (AraC/Xyl family); O6-methylguanine-DNA methyltransferase]SubName: Full=Bifunctional protein; EC=2.1.1.63; chromosome CDS339360 861 + 0.450639
alkB ACIAD0345 DNA repair system specific for alkylated DNASubName: Full=DNA repair system specific for alkylated DNA; chromosome CDS340217 609 + 0.433498
aspP ACIAD0275 adenosine diphosphate sugar pyrophosphatase (ADP-ribose pyrophosphatase)SubName: Full=Adenosine diphosphate sugar pyrophosphatase (ADP-ribose pyrophosphatase); EC=3.6.1.13; chromosome CDS275197 621 - 0.439614
crc ACIAD3526 catabolite repression control proteinSubName: Full=Catabolite repression control protein; chromosome CDS3453721 858 + 0.444056
dinP ACIAD0225 DNA polymerase IV, devoid of proofreading, damage-inducible protein PRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS224762 1056 - 0.410985
dnaA ACIAD0001 DNA replication initiator protein, transcriptional regulator of replication and housekeeping genesRecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS201 1398 + 0.438484
dnaB ACIAD2433 replicative DNA helicase;chromosome replication, chain elongationSubName: Full=Replicative DNA helicasechromosome replication, chain elongation; chromosome CDS2397789 1446 + 0.397649
dnaE ACIAD2089 DNA polymerase III, alpha chainSubName: Full=DNA polymerase III, alpha chain; EC=2.7.7.7; chromosome CDS2072315 3564 + 0.428171
dnaG ACIAD2899 DNA primaseSubName: Full=DNA primase; EC=2.7.7.-; chromosome CDS2837360 1890 + 0.418519
dnaN ACIAD0002 DNA polymerase III, beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1834 1149 + 0.441253
dnaX ACIAD1970 DNA polymerase III, tau and gamma subunits (DNA elongation factor III)SubName: Full=DNA polymerase III, tau and gamma subunits (DNA elongation factor III); EC=2.7.7.7; chromosome CDS1957924 2136 - 0.402154
fis ACIAD2446 DNA-binding protein for site-specific recombination, transcription of rRNA and tRNA operons and DNA replicationSubName: Full=DNA-binding protein for site-specific recombination, transcription of rRNA and tRNA operons and DNA replication; chromosome CDS2410329 291 + 0.426117
gyrA ACIAD2652 DNA gyrase, subunit A, type II topoisomeraseRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS2605946 2730 - 0.445421
gyrB ACIAD0004 DNA gyrase, subunit B (type II topoisomerase)RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS4127 2469 + 0.44674
hepA ACIAD1204 RNA helicaseRecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; chromosome CDS1204255 2862 + 0.424878
himA ACIAD3040 integration host factor (IHF), alpha subunit, DNA-binding protein, DNA replicationRecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome CDS2970092 294 - 0.44898
himD ACIAD2346 integration host factor (IHF),beta subunit, site specific recombinationRecName: Full=Integration host factor subunit beta; chromosome CDS2308539 306 - 0.385621
holB ACIAD2361 DNA polymerase III, delta prime subunitSubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7; chromosome CDS2319517 996 - 0.400602
holC ACIAD0252 DNA polymerase III, chi subunitSubName: Full=DNA polymerase III, chi subunit; EC=2.7.7.7; chromosome CDS250800 408 - 0.357843
hrpA ACIAD2102 ATP-dependent helicaseSubName: Full=ATP-dependent helicase; EC=3.6.1.15; chromosome CDS2088950 3855 - 0.410117
hupB ACIAD1408 DNA-binding protein HU-betaSubName: Full=DNA-binding protein HU-beta; chromosome CDS1401297 273 + 0.388278
ligA ACIAD0848 DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS835730 2031 + 0.454948
mfd ACIAD1395 transcription-repair coupling proteinRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1388642 3516 + 0.410978
mutL ACIAD2375 enzyme in methyl-directed mismatch repair, stimulates binding of Vsr and MutS to heteroduplex DNARecName: Full=DNA mismatch repair protein MutL; chromosome CDS2334119 1962 - 0.422018
mutM ACIAD0707 formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS693723 819 - 0.422466
mutS ACIAD1500 methyl-directed mismatch repair, recognize exocyclic adducts of guanosineRecName: Full=DNA mismatch repair protein MutS; chromosome CDS1495787 2646 - 0.400605
mutY ACIAD3606 A/G specific adenine glycosylaseSubName: Full=A/G specific adenine glycosylase; EC=3.2.2.-; chromosome CDS3520893 1035 + 0.45314
nth ACIAD1108 endonuclease III DNA glycosylase/apyrimidinic (AP) lyaseRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1095871 666 - 0.403904
nudH ACIAD0455 (di)nucleoside polyphosphate hydrolase (Ap5A pyrophosphatase)RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS453598 501 - 0.457086
ogt ACIAD0692 methylated-DNA--protein-cysteine methyltransferase (6-O-methylguanine-DNA methyltransferase) (O-6-methylguanine-DNA-alkyltransferase)RecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; chromosome CDS681122 504 + 0.400794
parC ACIAD0234 DNA topoisomerase IV, subunit ARecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS233653 2217 + 0.425801
parE ACIAD3544 topoisomerase IV subunit BRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS3468943 1881 - 0.45933
phrB ACIAD1182 deoxyribodipyrimidine photolyase (photoreactivation), FAD-bindingSubName: Full=Deoxyribodipyrimidine photolyase (Photoreactivation), FAD-binding; EC=4.1.99.3; chromosome CDS1178836 1434 - 0.366109
polA ACIAD3030 DNA polymerase I, 3'--> 5' polymerase, 5'--> 3' and 3'--> 5' exonucleaseSubName: Full=DNA polymerase I, 3--> 5 polymerase, 5--> 3 and 3--> 5 exonuclease; EC=2.7.7.7; chromosome CDS2959118 2763 + 0.435758
priA ACIAD0409 primosomal protein N' (= factor Y) directs replication fork assembly at D-loops, ATP-dependent.SubName: Full=Primosomal protein N (= factor Y) directs replication fork assembly at D-loops, ATP-dependent; chromosome CDS410989 2232 - 0.448477
radC ACIAD3126 DNA repair protein, associated with replication forksRecName: Full=UPF0758 protein ACIAD3126; chromosome CDS3053102 816 + 0.383578
recA ACIAD1385 DNA strand exchange and recombination protein with protease and nuclease activity.RecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1380692 1050 - 0.405714
recB ACIAD0398 exonuclease V, beta chainSubName: Full=Exonuclease V, beta chain; EC=3.1.11.5; chromosome CDS394104 3705 + 0.435088
recC ACIAD0397 exonuclease V, gamma chainSubName: Full=Exonuclease V, gamma chain; EC=3.1.11.5; chromosome CDS390432 3666 + 0.443808
recD ACIAD0399 exonuclease V, alpha subunitSubName: Full=Exonuclease V, alpha subunit; EC=3.1.11.5; chromosome CDS397904 1779 + 0.437886
recF ACIAD0003 DNA replication, recombinaison and repair proteinRecName: Full=DNA replication and repair protein RecF; chromosome CDS2998 1077 + 0.420613
recG ACIAD3235 ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; chromosome CDS3150747 2061 + 0.447356
recJ ACIAD3500 ssDNA exonuclease, 5'--> 3' specific , Mg dependentSubName: Full=SsDNA exonuclease, 5--> 3 specific , Mg dependent; EC=3.1.-.-; chromosome CDS3424072 1707 - 0.440539
recN ACIAD0354 protein used in recombination and DNA repairRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS346630 1662 - 0.441637
recO ACIAD2578 DNA repair proteinSubName: Full=DNA repair protein; chromosome CDS2537001 711 - 0.372714
recR ACIAD2312 recombination protein, gap repairRecName: Full=Recombination protein RecR; chromosome CDS2278015 597 - 0.428811
rep ACIAD0900 ATP-dependent DNA helicaseSubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; chromosome CDS882754 2040 + 0.410784
rhlB ACIAD1314 ATP-dependent RNA helicase (DEAD box)RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; chromosome CDS1313277 1152 + 0.404514
rnhA-dnaQ ACIAD1137 bifunctional protein [Includes: ribonuclease HI; DNA polymerase III ,epsilon subunit, 3-5 exonucleolytic proofreading function]SubName: Full=Bifunctional protein; EC=2.7.7.7; EC=3.1.26.4; chromosome CDS1124144 1353 - 0.427938
rnhB ACIAD1248 RNAse HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS1247459 570 + 0.422807
rnt ACIAD1149 ribonuclease T (degrades tRNA , has exonuclease and ssDNAse activity)RecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; chromosome CDS1140263 666 - 0.412913
ruvA ACIAD2614 holliday junction helicase subunit ARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS2569766 615 + 0.40813
ruvB ACIAD2615 holliday junction helicase, subunit BRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS2570388 1005 + 0.483582
ruvC ACIAD2041 holliday junction nucleaseRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS2029228 576 + 0.428819
sbcC ACIAD0916 ATP-dependent dsDNA exonuclease (Suppression of recBC)SubName: Full=ATP-dependent dsDNA exonuclease (Suppression of recBC); chromosome CDS897336 3597 - 0.392549
sbcD ACIAD0917 ATP-dependent dsDNA exonuclease (Suppression of recBC)SubName: Full=ATP-dependent dsDNA exonuclease (Suppression of recBC); chromosome CDS900942 1251 - 0.421263
ssb ACIAD3449 ssDNA-binding protein controls activity of RecBCD nucleaseRecName: Full=Single-stranded DNA-binding protein; chromosome CDS3371292 579 - 0.447323
tag ACIAD3611 3-methyl-adenine DNA glycosylase I, constitutiveSubName: Full=3-methyl-adenine DNA glycosylase I, constitutive; EC=3.2.2.20; chromosome CDS3523373 558 + 0.422939
topA ACIAD0493 DNA topoisomerase type I, omega proteinRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS484929 2646 + 0.449358
ung ACIAD2352 uracil-DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS2313666 714 - 0.40056
uvrA ACIAD3455 excinuclease ABC subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS3376566 2898 + 0.451001
uvrB ACIAD2569 excinuclease ABC subunit B (ATP-dependent DNA excision repair enzyme UvrAC)RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS2527299 2028 - 0.430966
uvrC ACIAD0340 excinuclease ABC subunit C; UvrC with UvrAB is a DNA excision repair enzymeRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS335860 1800 + 0.439444
xerC ACIAD2657 site-specific tyrosine recombinaseRecName: Full=Tyrosine recombinase XerC; chromosome CDS2611761 918 - 0.408497
xerD ACIAD0266 site-specific tyrosine recombinaseRecName: Full=Tyrosine recombinase XerD; chromosome CDS266488 918 - 0.431373