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2024-05-06 07:29:14

Gene list

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COG category: Replication, recombination and repair
Organism: Desulfotalea psychrophila LSv54, LSv54

Number of genes found: 140

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Desulfotalea psychrophila LSv54, LSv54
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA DP2576 probable DNA photolyasechromosome CDS2930025 1377 - 0.491649
NA DP1087 probable DNA polymerase Ichromosome CDS1225753 2670 + 0.501498
NA DP1460 unknown proteinchromosome CDS1629171 492 + 0.445122
NA DP2169 probable DNA-binding protein HUchromosome CDS2490261 273 - 0.428571
NA DP2473 unknown proteinchromosome CDS2823807 594 + 0.501683
NA DP2698 related to exodeoxyribonuclease VII small subunitchromosome CDS3059245 222 + 0.423423
NA DP2012 related to pore-forming cytotoxin integrasechromosome CDS2292660 1224 - 0.486928
NA DP1033 probable uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvasechromosome CDS1170542 1323 - 0.522298
NA DP0965 probable DNA polymerase III, epsilon chainchromosome CDS1079935 720 - 0.488889
NA DP0291 related to extracellular deoxyribonuclease [Precursor]chromosome CDS318719 759 + 0.525692
NA DP1002 related to serine/threonine-protein kinasechromosome CDS1133616 1311 + 0.543097
NA DP1976 probable ATP-independent RNA helicase (DbpA)chromosome CDS2243011 1410 - 0.520567
NA DPPB05 probable reverse transcriptase/maturase family proteinLSv54, large plasmid CDS6170 1320 - 0.449242
NA DP0421 conserved hypothetical proteinchromosome CDS449460 2595 - 0.464355
NA DP0860 probable insertion element IS1 1/5/6 protein (InsB)chromosome CDS966657 504 - 0.545635
NA DP1006 related to NAD-dependent DNA ligasechromosome CDS1137320 2040 + 0.516667
NA DP0650 probable DNA gyrase, subunit Achromosome CDS713638 2544 + 0.45283
NA DP2099 hypothetical proteinchromosome CDS2390087 159 + 0.45283
NA DPPB53 probable transposase (partial length)LSv54, large plasmid CDS52394 255 + 0.4
NA DP1572 unknown proteinchromosome CDS1753281 1605 + 0.538318
NA DP0792 related to DNA primase (DnaG)chromosome CDS890067 1854 + 0.492449
NA DP2573 related to serine/threonine protein kinasechromosome CDS2925525 1551 - 0.486138
NA DP2720 hypothetical proteinchromosome CDS3081764 333 + 0.477477
NA DP2372 hypothetical proteinchromosome CDS2707605 894 - 0.40604
NA DP2806 probable ribonuclease HIIchromosome CDS3163253 678 + 0.463127
NA DP1760 related to DNA polymerase, bacteriophage-typechromosome CDS1985097 810 - 0.507407
NA DP2040 related to integrasechromosome CDS2320753 1221 - 0.437346
NA DPPB95 probable transposase (partial length)LSv54, large plasmid CDS116046 402 - 0.470149
NA DP1908 probable endonuclease IIIchromosome CDS2148515 621 - 0.458937
NA DP2765 probable excinuclease ABC, subunit Bchromosome CDS3128646 2121 - 0.491749
NA DPPB50 probable transposase (partial length)LSv54, large plasmid CDS50600 858 + 0.41958
NA DP0898 related to ATP-dependent RNA helicase (RhlE)chromosome CDS1010645 1497 + 0.493654
NA DP0861 probable insertion element iso-IS1d protein (InsA)chromosome CDS967079 276 - 0.528986
NA DP2521 related to 7,8-dihydro-8-oxoguanine-triphosphatasechromosome CDS2872154 411 + 0.440389
NA DP2140 probable integrase, fragmentchromosome CDS2462049 204 - 0.45098
NA DP0840 probable DNA mismatch repair protein (MutS)chromosome CDS942823 2640 - 0.52803
NA DP1713 related to transposasechromosome CDS1930672 303 + 0.376238
NA DP2393 conserved hypothetical proteinchromosome CDS2734930 666 - 0.445946
NA DPPB65 related to transposase (partial length)LSv54, large plasmid CDS80484 582 - 0.455326
NA DP0116 probable excinuclease ABC, subunit Achromosome CDS125826 2832 - 0.516596
NA DP1343 related to exodeoxyribonuclease V, gamma chainchromosome CDS1497618 3171 + 0.524125
NA DP2783 probable integration host factor, alpha-subunitchromosome CDS3147463 285 + 0.424561
NA DP1978 probable site-specific recombinase (XerD-like)chromosome CDS2245267 1038 - 0.476879
NA DP2142 related to transposase, fragmentchromosome CDS2462839 411 - 0.423358
NA DP0053 probable endonuclease IVchromosome CDS58967 879 + 0.515358
NA DP2773 hypothetical proteinchromosome CDS3138758 633 + 0.42496
NA DP0888 hypothetical proteinchromosome CDS998175 1359 - 0.518028
NA DP2141 probable transposase, fragmentchromosome CDS2462366 339 - 0.39233
NA DP0936 probable ATP-dependent RNA helicasechromosome CDS1048796 1272 - 0.507862
NA DP2463 related to A/G-specific adenine glycosylasechromosome CDS2806265 1101 - 0.547684
NA DP2873 probable 7,8-dihydro-8-oxoguanine-triphosphatasechromosome CDS3244118 498 - 0.433735
NA DP2507 related to reverse transcriptase/maturasechromosome CDS2857015 1320 - 0.459848
NA DP1929 related to single-strand DNA-specific exonucleasechromosome CDS2190052 1659 - 0.481013
NA DP1663 related to DNA polymerase III, alpha subunitchromosome CDS1857794 3600 - 0.5125
NA DP1402 unknown proteinchromosome CDS1567761 282 - 0.482269
NA DP0526 related to ATP-dependent dsDNA exonuclease (SBCC)chromosome CDS573880 3246 - 0.509858
NA DP1430 related to DNA polymerase III, subunit gamma/tauchromosome CDS1595547 1005 - 0.496517
NA DP2206 related to primosomal protein N' (PriA)chromosome CDS2533830 2601 - 0.472511
NA DPPB94 probable transposase (partial length)LSv54, large plasmid CDS115473 543 - 0.45488
NA DP1517 unknown proteinchromosome CDS1685978 567 + 0.435626
NA DP2280 probable topoisomerase IV, subunit Bchromosome CDS2614232 1842 + 0.470141
NA DP0913 probable formamidopyrimidine-DNA glycosylasechromosome CDS1024977 834 - 0.498801
NA DP1744 related to ATP-dependent helicasechromosome CDS1960804 2331 - 0.505791
NA DP1422 related to integration host factor, alpha subunitchromosome CDS1587217 312 - 0.458333
NA DP2617 probable DNA topoisomerase IIIchromosome CDS2974560 2463 + 0.476248
NA DP2054 unknown proteinchromosome CDS2331706 390 - 0.54359
NA DP2125 related to DNA repair photolyasechromosome CDS2441167 1272 - 0.474843
NA DP2807 hypothetical proteinchromosome CDS3163893 387 + 0.387597
NA DP2433 related to exodeoxyribonuclease (partial length)chromosome CDS2779349 285 + 0.424561
NA DP2007 related to terminase, small subunitchromosome CDS2289831 579 - 0.438687
NA DP2394 conserved hypothetical proteinchromosome CDS2734930 546 - 0.483516
NA DP0136 hypothetical proteinchromosome CDS153170 813 + 0.487085
NA DP0406 probable ATP-dependent DNA helicasechromosome CDS435764 2085 + 0.421103
NA DP2560 hypothetical proteinchromosome CDS2918125 1224 - 0.418301
NA DP0794 probable SMF protein (DNA processing chain A)chromosome CDS893681 1074 + 0.501862
NA DPPB92 probable transposase (partial length)LSv54, large plasmid CDS113432 534 - 0.447566
NA DP2083 related to ATP-dependent helicasechromosome CDS2374177 2523 - 0.439952
NA DP0882 related to ATP-dependent DNA helicase II (Rep)chromosome CDS988369 2313 + 0.554691
NA DPPB93 probable transposase (partial length)LSv54, large plasmid CDS114049 1362 - 0.477974
NA DP0648 probable DNA polymerase III, beta chainchromosome CDS709919 1131 + 0.3687
NA DP1746 hypothetical proteinchromosome CDS1964840 408 - 0.367647
NA DP1967 related to DNA mismatch repair protein MutLchromosome CDS2234475 939 + 0.511182
NA DP0407 conserved hypothetical proteinchromosome CDS437864 1287 + 0.454545
NA DP0788 hypothetical proteinchromosome CDS886356 873 + 0.450172
NA DP2416 probable exodeoxyribonuclease (ExoA)chromosome CDS2758766 1443 + 0.506584
NA DP0784 related to DNA polymerase III, delta subunitchromosome CDS881678 1017 + 0.486726
NA DP2478 related to excinuclease ABC, subunit Cchromosome CDS2829807 1824 + 0.506031
NA DP2585 probable uracil-DNA glycosylasechromosome CDS2942322 657 - 0.496195
NA DP0278 related to chromosomal replication initiator protein DnaAchromosome CDS301842 1464 - 0.473361
NA DP0412 probable DNA-invertasechromosome CDS441990 579 - 0.438687
NA DP2198 probable DNA-damage-inducible protein Pchromosome CDS2521931 1131 + 0.458886
NA DP0527 related to ATP-dependent dsDNA exonuclease (SbcD)chromosome CDS577142 1239 - 0.54318
NA DP1431 related to DNA polymerase III, subunit gamma/tauchromosome CDS1596514 810 - 0.522222
NA DP1345 related to exodeoxyribonuclease V, alpha chainchromosome CDS1504353 1584 + 0.517677
NA DP0995 probable helicasechromosome CDS1121996 4200 - 0.469762
NA DP2281 probable topoisomerase IV, subunit Achromosome CDS2616145 1992 + 0.462349
NA DP0418 hypothetical proteinchromosome CDS447098 939 + 0.473908
NA DP0920 probable methylated-DNA-protein-cysteine methyltransferasechromosome CDS1031098 495 - 0.50101
NA DP1966 probable DNA mismatch repair protein MutLchromosome CDS2233528 1029 + 0.496599
NA DP1604 related to integrase/recombinasechromosome CDS1786612 1074 - 0.509311
NA DP0176 related to integrasechromosome CDS192031 1398 + 0.482117
NA DP2779 conserved hypothetical proteinchromosome CDS3143845 813 + 0.479705
NA DP1945 probable exodeoxyribonuclease VII, large chainchromosome CDS2206327 1347 + 0.444692
NA DP2156 related to UV-endonucleasechromosome CDS2471913 921 + 0.411509
NA DP1977 related to DNA gyrase inhibitory proteinchromosome CDS2244740 468 + 0.491453
NA DP1600 unknown proteinchromosome CDS1784275 447 + 0.47651
NA DP2579 probable single-strand binding protein (Ssb)chromosome CDS2934313 429 - 0.526807
NA DP2958 probable RecA proteinchromosome CDS3348438 1068 + 0.496255
NA DP1714 related to transposasechromosome CDS1930971 807 + 0.403965
NA DP2434 related to transposasechromosome CDS2780078 1104 + 0.416667
NA DP2034 probable modification methylasechromosome CDS2313536 1083 + 0.423823
NA DP0164 probable DNA-3-methyladenine glycosylase Ichromosome CDS183507 615 + 0.479675
NA DP1250 hypothetical proteinchromosome CDS1394784 408 - 0.431373
NA DP2599 probable replicative DNA helicasechromosome CDS2953417 1407 + 0.473348
NA DP2419 related to serine/threonine protein kinasechromosome CDS2764518 1143 - 0.418198
NA DP0613 conserved hypothetical proteinchromosome CDS668047 2004 + 0.319361
NA DP0818 probable DNA-binding protein HU-betachromosome CDS918895 366 - 0.434426
NA DP0665 hypothetical proteinchromosome CDS732013 216 - 0.393519
NA DP0715 related to DNA repair protein RadCchromosome CDS791362 750 + 0.472
NA DP0649 probable DNA gyrase, subunit Bchromosome CDS711120 2424 + 0.440594
NA DP0534 unknown proteinchromosome CDS582550 483 - 0.445135
NA DPPB73 conserved hypothetical proteinLSv54, large plasmid CDS88110 1068 - 0.418539
NA DP2879 Probable ATP-dependent DNA helicase, UvrD/REP familychromosome CDS3249627 2202 - 0.490917
NA DP1931 similar to DNA transport competence protein (ComEA)chromosome CDS2192679 450 - 0.482222
NA DP1690 probable ATP-dependent RNA helicasechromosome CDS1892197 1899 + 0.45445
NA DP1987 related to 5' to 3' DNA helicasechromosome CDS2255442 2463 + 0.460008
NA DP1344 related to exodeoxyribonuclease V, beta chainchromosome CDS1500778 3576 + 0.529922
NA DP1166 unknown proteinchromosome CDS1301052 444 + 0.448198
NA DP0425 probable prophage integrasechromosome CDS454057 1200 - 0.461667
NA DP0177 unknown proteinchromosome CDS193443 690 + 0.433333
NA DP0282 related to transcription-repair coupling factorchromosome CDS307857 3555 + 0.519831
NA DP0002 conserved hypothetical proteinchromosome CDS810 825 + 0.505455
NA DP2647 related to nucleasechromosome CDS3010421 492 - 0.420732
NA DP2207 related to ATP-dependent helicase HrpAchromosome CDS2536534 3774 + 0.457605
NA DP1413 related to ATP-dependent RNA helicasechromosome CDS1578578 1275 - 0.450196
NA DP0900 probable DNA-binding protein HUchromosome CDS1014346 294 + 0.435374
NA DPPB96 probable transposition resolvaseLSv54, large plasmid CDS116449 561 - 0.483066
NA DP0520 related to predicted helicasechromosome CDS564385 3162 - 0.461101
NA DPPB15 probable conjugal transfer protein TrbJLSv54, large plasmid CDS16825 864 + 0.390046
NA DP2237 hypothetical proteinchromosome CDS2573260 333 + 0.429429