Gene list
Applied filters:
COG category: Replication, recombination and repair
Organism: Dechloromonas aromatica RCB, RCB
Gene type: CDS
Number of genes found: 191
 | ||||||
| Show UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View as list | |
|
| ||||||
# Dechloromonas aromatica RCB, RCB >Daro_1657 conserved hypothetical protein MSKESVMALPNTALAIPTISPRPALKLVKTLNLSRERWLDVRKQGIGSSD AAAAVGLNPYKSPLELWLEKTGRDGNLPKADPHDEESPLYWGTLLEPIVA AHYTKRSGHRVRRINAVLQHPDPDKAWMLANIDREVIGVPDVQILECKTA GINGARLWKEGVPEYVQLQVQHQLAVTGKQAADVAVLIGGQHLEIHRIER DDLLIGRLIELERHFWQYVETDTPPPADGSDSADTALKALYPCDSGTTVD FSDNRNLSATFADWLSVRQTLADTEAFEAQLKQTLQQAMGEASKACFETG AVTWKKAKDSTTIDLPALLKDYPEFQQRYAIAKPGSRRFLVA >Daro_2223 Transposase, IS4 MNIGKTLFAQLMDFLPWTTFARYVARYEGDKGVRTLTCAEQFRIMAFAQL TYRESLRDIEVCLSAQAGKLYPMGFRQEIKRSTLADANETRDWRIYAEFA QRLIEQARKLYAGDSFGIELENTTYALDSTTIDLCLSLFPWALFRTTKSA VKMHTLLDLRGNIPSFIHISDGKLGDVNVLDILVLEVGAIYVMDRGYLDF ARLYLMHQAQAFFVTRTKSNTRLRRVHSAAVDRSTGIICDQTIALTGTTS RQDYPEHLRRIRFKDPETDKTLVFLTNNFTIPAANICALYKRRWQVELFF KWIKQHLRIKKFYGNSDNAVRSQIWIAISVYVLVAIVKKRLKLDASLYTL LQILSLTLFEKMPLQQAFSPSEYILPEGAHNNQLNLFTI >Daro_0820 Protein kinase:Protein phosphatase 2C-like MKLKISAGQYSDKGRKESNQDFHGLYVPNEPLLSSKGIAIALADGISSSQ VSQVAAQSAVTGFLEDYYCTSEAWSVRTSAERVLTATNSWLHAQTQQSQH RYDKDRGYVCTFSGMIIKSTTAHIFHVGDTRIYQLRGKTLKQLTEDHRVW ISSTQSHLARALGIDRKLDIDYQAIQVEQGDVFLLVTDGVYEHIDANFMI ATIDCCEGNLDAAAKAIVDEAILQGSGDNLTLQIIKVEALPSPEANEIYR QISELPFPPLLEARASFDGYQIVREIKGSSRSHIYLAVDSESGEKVVIKT PSINLQGDPAYLERFLMEEWIARRINSAHVLKPCLQTRKRHYIYVVTEFI EGQTLSQWMIDNPKPDLASVRGILEQAAKGLQAFHRLEMVHQDIRPDNIM IDSTGTVKIIDFGATRVAGVMEIATPIEQINLLGSATYAAPEYFLGENGS SRSDIFSLGVIAYQMLSGRLPYGVEVAKSRTRAAQRKLVYQTVLNDEKEI PAWVDDAIRKAVDPDPFERYEELSEFVFDLHHPNKDFLNKTRPPLIERNP VIFWKSVSFVLMLAVIVLSLARFR >Daro_3822 RNA-directed DNA polymerase (Reverse transcriptase) MALHAKAKSESGYRFYALYDKIYRTDILAHAYAQCRSNKGAPGVDRQDFE DVEAYGVRRWLEELALALKEESYRPDPIRRVFIPKANGKLRPLGISTLHD RVCMTAAMLVLEPIFEADLPDEQYAYRPGRNAQQAAEEVKNRLYLGQTDV VDADLSDYFGSIPHSELMKSLARRIVDRRVLHLIKMWLECAVEETDQRGR KKRTTEAKDQGRGIPQGSPISPLLSNLYMRRFVLAWKKLGLERSLGSRIV TYADDLVILCKCGKAEEALQWMRTIMGKLKLTVNEEKTRICQVPAGTFDF LGYSFGRRYVPRTGKPQIALWPSKKSIRRMVEKIHDMTERQTGWQETTEL VGKLNRTLRGWANYFSVGNVSRAYRALDSYTATRLRRWLRYKYKLRHCKG GSYPLSHLYGYFGLVRLGARGRSEAWVKA >Daro_2704 Phage integrase MPLSNTAIINAKPSDKPYALTDERGLSIQIQPTGGKWWRLRYRFDGKAKM LSLGVYPDVGLKEARERREEARKLLATGVDPGEHRKAHKAAKAERSANSF EVICREWLEQRKDTVEPAQTAKTLARMENDVFPWIGGKAISEITAPDVLS VMRRMDERGARYTAHRVRSEISRAFRYAIATGRAERDPCPDLRGAIPPAK ETHFAAITDPKEVGGLLRAFDGFSGTFVVKSALLLAPLLFTRPGELRKAE WASFDLEKSDWRYFINKTKTEHLVPLATQAVVILRDLHALTGHGRYLFPN ARTSERPMSEAAVNAALRRIGYDTKTEISGHGFRAMARTILHEELHVKPE VIEHQLAHTVPDALGTAYNRTKFLKERKAMMQLWADYLDKLKAGAEVIPF HGAA >Daro_0018 DNA topoisomerase III MPRHPTGQTMSKKLIIAEKPSVAADIARALGGFTKHDDYFESEELVLSSA VGHLLELACPEEFEVKRGKWSFAHLPVIPPHFALKPIEKTESRLKVLNKL IKRKDVTGLINACDAGREGELIFNYIAQNAKSGKPVQRLWLQSMTQGAIR DGFSRLRPGQEMEGLGDAAVCRSESDWLVGINGTRAMTAFNSKTGGFHLT TVGRVQTPTLAIVVERERKIRDFKSRDYWEVEADFTAKAGSYKGKWFDEA FKGKNDDEHARADRLWEVARAEAIRAATEGKPGEVTEEAKPETRLSPALF DLTTLQREANARFGFSAKTTLSLAQALYEKHKVLTYPRTDSRCLPEDYLP TVKETLTILTGEGAGKGHDEVLLARYSPFAHQILARNWVLPNKRIFNNAK ISDHFAIIPTPQAPKSLNEMEQKLYDFVVRRFLSVFFPAAEYMVTTRITR VEGHPFKTEGKVLVNPGWLAVYGKEGQDGDEGNLVAVDAKEKVKTDEVTV KANATKPPPRYSEATLLSAMEGAGKMVDDEELKAAMAGRGLGTPATRAQI IENLIGEQYMHREGRELIPTAKAFTLMTLLNGLGIKELTQPELTGDWEWK LGRIEKGEFTRDEFMREIAEMTRHMVERAKQYEADTIPGDFGVLTAPCPK CGGQIRETYKKFQCGSCDYALWKIVAGRQYEPAEIEQLLTEKQVGPLTGF RNKMGRSFSAAIKLNDELQPEFDFGQDKADAADAEPVDFSAQESLGKCPK CAANVFEHGTSYVCEKSVGPAKTCDFRSGKIILQQPIDAAQMKKLLADGK TDLLKEFVSNRTRRKFSAYLVNQGGKVGFEFEKKVAKPKAPAKKKTEA >Daro_3894 DNA photolyase, FAD-binding:DNA photolyase, N-terminal MKKEKALVWFRRDLRDHDHAALSAALAEAQQVYCAFVFDSEILDPLPTRH DRRVHFIRESLVELDAALRARGGGLIIRHGQAVDEIPALARRLGVSAVFT NRDYEPSAKRRDAQVARQLRNDDIAFHGVKDQAIFDGDEVLTQAGKAFSV FTPYKNAWLKRLTTADYAAWPCDGRLAGQELAGIPTLEEIGFTPTDLAEL GIQPGMSGAKGLWDDFSRDRIERYGSLRDFPAVKGVSYLSVHLRFGTISI RQLVRQALAHQADTWLSELIWRDFYFMILDHFPHVAGHAFKPEYDAIQWA SRPEAFAAWCEGCTGYPLVDAAMRQLNFSGWMHNRLRMVVASFLTKDLGI DWRLGEKYFAEQLNDFDLSANNGGWQWASSSGCDAQPYFRIFNPVTQSEK FDAEGKFIRRYVPELAKVHDKYIHAPWKMGRIEQEALGVVIGRDYPSPIV DHATARDETLARYAVVKKQA >Daro_0468 UvrD/REP helicase MVLAIDRLEEDRIARQRALEVASFIVEAPAGAGKTELLTQRYLRLLAVVE HPEEVLALTFTNKAATEMRDRILGSLELASGDKLPEQPHKQLTFGLARQV LAHDAERGWSLLGHPGRLRITTLDSLCASLARQMPYLSRFGSQPGVSDDA EAHYATAARRTLEMVESGSDDAEVIAEALAFMDNNAGRLEKLLIAMLGRR DQWLHHASRIESGAMKREVEAGFAALIERDLAAVGGLLDGRMQSLLMPLA RFAAANAPGLLDAIADWSSPLTAAIADLPTWQALAGLLLTGTGTLRKSVD KRIGFPADKELADQKKAMLELLGDLRSVDGLEAALAMLVKLPQPELSEAE WATVECFSRLLRLAAGQLWLAFQEAGEVDFIEIAARAGLALGDDDAPTDL AQALDYRIRHLLVDEFQDTSPSQVGLIEKLTRGWMPDDGRTLFVVGDPMQ SIYRFRKADVGLFLRVRERGIGDIRLGHLRLFRNNRSYPGIVDWVNAAFP SIFPAEDSPEAGAVRYAESAATRSPRADSGVVVHPVIEHEGGDAAGEEAR RVLTIIREARRAAPAERIAVLVRARSHLDALVSEIRRSAPELRFQAVDIE GLDGRQHVQDLLTLFRALHHRADRVHWLALLRAPWCGLKLADLHALAADD KKSTIWQLMQDEARLARLSDDGQQRLRHVLGVLHQAFAGRDRQHPRRWLE GVWLMLGGPRCLEAPEALNDVEAFFALVDKLVASRTLSAETLAAHAAELY APSDPLGDAVQMMTVHKSKGLEFDTVILPGLHRETGGNDSSLLLWDEVAG ADGDEHLLVAPIKQKGAGNGEPTAYDYLKKLEAERAAHEDERLLYVAATR AIRRLHLLGIAVADAKKEEGLKSPANGTLLKLLWPGVAQREFLAALTEGE SGEPARASIDPATFVPPLVRLREVHVPPALRSPAEGVRPADNPVDLDTPE STLSLEASVGTLVHRCLELIAKNGLPAWSDKRISGLQPVYQRWLQAQGHS EADAESGAGEVVAALVSTLASDTGRWLLTDHPQSAAEQAWSSTDGSLTVN HVIDRVFVADACRWIIDYKTVRLPDAELPQRAESYRPQLERYASLFAGDP LPLRLAIYFPLQGRLIELPAAMPSARAAQFSLFE >Daro_3523 Resolvase, N-terminal:Resolvase helix-turn-helix region MSGQNVGYVRVSTIVQNTARQLEGVALDEVFEDKASGKDTSRPQLEACLK HLRKGDTLHIHSLDRLGRNLDDLRKIIKELTGRGVVVKSHKENLTFTGDD SPMANLLLSMLGAVAEFERSLILERQREGIAIAKAAGAYKGGKKKMNEEQ AQELRRRAAAGEKKAALAREFGISRETLYSYLGQ >Daro_2560 UvrD/REP helicase MIKADRWQPSDGLKLEPNALAAARESQRSLALTAGPGAGKTEMLAQRADF LLRTGICRYPQRILAISFKVDASRNLKDRVRRRCGFELAARLDSHTFHAF AKRLIDRFRPVLTGRNALDPDYSIGSPRVQGRQIDFEDMVPLAVQILQSS EVARNAVRQTYSHVFLDEFQDCTDPQYQLIRIAFLGTGIPLTAVGDTKQR IMGWAGALEGVFQAFAEDFQALPLNLYQNFRSQPRLRRMQNAMVKIMDPK AAVPDSELAGKGGSVDVLAFADSQTEAEALADLIQAWIADEGMPPSEIAV LVSKLPDLYADRLMAELASRHLPFRNEQNLQDLSVEPAARLIVDFLSVVA GEREPDAYGRLMDVLLATGVDEDTAYELRARWNRHIDGARNQVREEGPVA HNAAALLKLADSFLALLGREALAALSADYERGNRLDEVIAQTLNRITDLL ALDTDTAGALSRFSEDSAVRIMTIHKSKGLEFDSVIMLGIEEQTFFGKRA DERSAFFVGISRAKRRLYLTVANHRERPEGYRRRWDEARSPLVEFLEYAT NTT >Daro_2971 conserved hypothetical protein MLSDNQKRWGVDQWAAFLSSKELPCMPRSKAMLLALESCQGEQLAARELA DIAAGDPFLCLRVLREAENRRAQRLGHETTTPLAAVMQLGTDTFRRLLLN SQETDESEIGLARCEASAYLARHLALRWGSARADISPDEVAMAALLSELG ELLLWLFARELPEAAQAALHSGRASRSAQAQLDTCGFRFKDLTLKCATIW HLPSLLTQLIRGVDNPRSNLSRLCVDAARHLASGGPDDPALPSDIAEAKH IIPSASLEWLAEQLPGLDEVQVANIALKASDLLDPTHH >Daro_0542 DNA polymerase III, delta subunit MLLKGEQLAAHLERELRPLYVLYGDDPLLVIEAADAIRAKSRQQGYSERE VLTVLPQFDWGTLLSAGGNMSLFGDKKLIDLRIPTGKPGKEGSAALQQWC QHLSMDNMLLITLPELDWREEKAVWFTALVNAGVAIKLMAPPLAELPGWI AGRLRRQQQSADLESLKFIAERVEGNLLAAHQEIQKLGLLYPTGQLSMAQ IREAVLNVARYDIDGLREALLAGDIGRLTRTLDGLMQEGEAPPLVLWAMS EEIRALTIIRAGMDAGKPMDMLLKDAKVWGPRATPVKKALQRLSTSALEA ALQHAGKIDRLAKGIGQGNIWEEFLRLGLRLTAAK >Daro_3526 Phage integrase MKLDKNVPKPYPDPDSGIYYTNFRIPADLVPHYNKTHIQKTLRTRDKKKA KDLNDERWFLLLREFDRIRRERTLGVSMTEEFIPHLLDEWLHFSLREDEE LRLRCSSARTNENSEHVYYGMVDELREGARTGKHPDFLLRDAAWFFKQKG IEYDSRSIAFAKFIEELSPRYARYLNTLASRDQGEREPTPPPPQQSLIPL SQVTKEFLGSRSKGKATALKKDSACVDKLLEIVGDKPITALKQQDIRDFF DVVQRLPSQRGGPKKPKAVTLRAWAGDEVTMSPETFKNNYVAPIRHLLKW AKSMYHDQGFPVGLTVDAITYQGTRVKGEDKQRAFKQPELERLFLGEEMQ AIASDPEKAGRYWLPMLGLYTGARINEVCRINPEVDWIEQEGIQCLSITT ETEPGEDITKSIKTGTPRIVPIHPKLIELGFLAYLERVKASGTGRLFPEF KPKGGKAGERAREWFSSFVADTGLRDDTPFAKITGFHAFRHTLITYAANH EDASMESAIDQITGHVGQGSAVKRGYISSRAIKRAYETVCKVDFGLTFWM TKVWQGESR >Daro_0878 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal MHFSDLGLKAELLRAVADQGYDTPTPIQQQAIPAVMTGRDLMATAQTGTG KTAGFTLPILHRLCSGPNDRLTRVAKTPRVLVLTPTRELAIQVEESVRTY GKHLPITSLAVFGGVGINPQIANLRRGVDILVATPGRLLDHVQQRTVDLS KIEIFVLDEADRMLDMGFIRDIRKIIALLPKQRQNLMFSATFSPDIRELA AGLLHNPASVDVAARNTAAETVTQRVIETNRDQKKELLCHLFETRGWHQV LVFARTKHGADALSKTLEKAGIKSAAIHGDKSQGARTRALTEFKEGKLVA LVATDIAARGIDIDALPYVINYELPNVAEDYVHRIGRTGRAGMEGEAISL VSHDERGSLRDIERLIKRDLERVVIPGFEPSAIAPPKPVQPPRGARKPQP GRPSAQKTAQKPGGPAQHRSGSRHR >Daro_1381 DNA polymerase III, epsilon subunit MDVVAVIDFETTGLSPAQGDRATEIAAVILENGKVVDRYQSLMNAGVRIP SFIEQLTGISNAMIRSAPPAAQVMREVSDFVGDIPLVAHNASFDCKFWDA EVARINLQRCQEFACSLLLARRLMPLAPSHKLGALIEFAKLPVAGRAHRA LADAEMAASLLAYLAGELRSKHGIQQVTHELLRKIQGLPKAKIAQVLARY QQSQ >Daro_0002 DNA polymerase III, beta chain MILIKTQRDTLLAPLQSVSGIVERRHTLPILSNVLLEKKGDRLTLLATDI EIQITTSTECAGGEGDGAVTVGARKMQEILRSLPDTSEVSLVLEDKRLQV RAGKSRFSLQTLPADDFPRMTMSEGETKQFSISQKAFRQLISKTQYSMAA QDVRYYLNGLLLLVEGKELRAVATDGHRLAYASVEIDTDLPRQEMILPRK TVLELNRLLVDTDDLLNITLTPNQVRFSFGSVVLVSKLIDGKFPDYERVV PATLKNHMKVGRQTLMQAMQRAAILTNEKFRGVRVVLGDNSLKLIAANAE QEEAVEEIEVDYTGDVIDVGFNVGYLLDVLNNIHADEIQWSFNDANSSAL ITLPGNDRFKYVVMPMRI >Daro_2671 Integration host factor, alpha subunit MTLTKAELADLLFEKVGLNKREAKDMVEAFFEEIRNALEVGDGVKLSGFG NFQLRDKPQRPGRNPKTGQEIPITARRVVTFHASQKLKSDVELAFDGTAA >Daro_2240 hypothetical protein MSWPSSSSRTRMTQKRRRLFSTSATGAFLSSTVASSPTAVSPPDIQGDDV QFDESPSRDSQAAKVNARIVDLVARQGVAPGDITVLIADALHKAEYYAAL RRLPLPRPATWLEEGVRRNNTVLIDTIQRFKGLESPIVILWGLDTIDLSR NLELRYVGMSRAKSLLVVVGKAGTCAAFRLDAVPKD >Daro_1636 hypothetical protein MLGLKKFLFRGGAPSHLPDDVRASLEGWRASAAPALDDLHFHTRYIVVDI VSSGLQPDSDQLLSIAASSVWQGAIQPDDTFYIDFSTLDGEGAAVDRQLA AFLLFAAKAPLVTYHVPYVGGFLQRAFKERLGVDFQPQWVDLAWLLPSMF EEKGHTVMPLDHWIDVFGLDSGSGRRDAMANTLLIGRIFQMLLVRAVGKQ IDTAKHLVDESRASSFLRRNH >Daro_2041 Transposase IS116/IS110/IS902 MNIVTVGIDLAKNVFALHAVDQYGKAIFIKPKVARGQLLEMVAQLPPCLI GMEACSGAHHWAREFSRVGHTVKLMAPKFVVPYRMSGKRGKNDAADAAAI CEAVTRPNMRFVPVKDVDQQAILCLHRTRQGFVEERTALYNRLRGLISEF GIVLPQKVERLRREIGAHLEALPGWANRCVGDLLAHADRLNEHIDEYDKA IALAAKQDQRSRQLMQLPGIGPTTASALVASLGGGHDFKNGRQLAAWVGL VPGQYSSGGKARLGRITKAGDAYLRSLLVMGGRSVLAGLGDKQDRFSRWA RNLVERRGYWKAAVAIAAKNLRLAWAVMHYGEEFRRIEDLA >Daro_1867 Gram negative topoisomerase IV, subunit B MRSTDIISLIPERMTDYSAASIRVLKDLEPVKERPGMYTRTTCPTHIVQE VIDNAADEALAGFAKKIAVAIRADGVIEVSDNGRGIPVEIHPEEGRPAVE LVFCKLHAGGKFNKKESGNAYRFSGGLHGVGVSVTNALSIRLEVEIKRGG GIHHIAFGAGFVTEPLSRIGDCGQRNTGTTVRIQPDPKYFDSPKVNLGQL EHLLRSKAVLMPNVTVELDIEGQDKKVWCYENGMADYLNEMMVGTPVAPI FVGEKYVETANGFAVGEGATWALAWFEEGGGKPESYVNLIPTLDGGTHEA GLKAGVFEAIKAFADHHAILPAKVKLAQEDVCGKMTYLLSAKVLDPQFQG QTKEKLTSRDAYKLVSQMVRDPFELWLNSHADFGKKIAELAVKAAQNRMK STQKIEKKKSSGIATLPGKLTDCESDDILRNEIFLVEGDSAGGSAKQGRD KETQAVLPLRGKVLNTWEVERDQLFKNNEVHDISVAVGVDPHGIEQIDSV DVTGLRYGRIIVMSDADVDGSHIQVLLFTLFLKHFPALVERGHIHVAQPP LFRVDVEARGHTRKVYCLDEAEKEQTLQKLADEGVSENKITVSRFKGLGE MNPDQLWETTLCPDTRRLVPFQASRETIKEMATTFTLLMGKGEASGRRAW MEKDGGLVEADV >Daro_2163 hypothetical protein MTLRPFIFSLLLLASVSIPALASTTSLPKSIMQQIPAGYEVISTAEGNLD EDQLPDFLVALGRKVEVQFAKKNPTGIIGYDAQPRPLLIFIQNKDGTYRL AKRNDHLILRMNEGGQCDPFEDGEDGLVINKRFFTVQNSVACGQHWSLYY TFKYSKELKDWIFHKEISETWILNPRAKNSDDEALVRGGSSVISAKKNAP VRFENYRPKN >Daro_1734 NAD-dependent DNA ligase MGLPEDVAKRAAWYRSELERHSYAYYVLDAPTIPDTEYDKLFRELQELEQ QYPELLTADSPTHRVGGVPLKEFPPRQHGVPMLSLNNAFAPEEVEAFDKR IRDGLETIAAVDYAVEPKFDGLAISLTYENGVFTCGATRGDGVTGEEVTP NLRTLRCIPLRLRGEGWPALIEIRGEVLMFKADFAELNARQRERGDKEFA NPRNAAAGSLRQLDSKITAGRPLSFFAYGVGAGADALAVKTHGEMMGLLA AWGFPVAEERRVVQGVRGLLGYFVEIGVKRPGLPYDIDGVVYKVNRLDWQ AQLGFVSRAPRFAIAHKFPAEEALTEVLGIDVQVGRTGAITPVARLKPVF VGGVTVTNATLHNEDEVRRKDVRLGDTVIVRRAGDVIPEVVAIVPEKRPM RDLFGSEPLNPPFELPATCPECGSAVVKGDDEAIARCTGGLYCPAQRKQA LWHFAARRAMDIEGLGDKLVDQLVDAGLVHSPADLYGLTVETLAGLERMG EKSAQNLVAAIDKSRQTTLARFIFGLGIRNVGEATARDLAKHFGGLDALL AADSAALQMVPDVGPVVAESLAAFFAEAHNREVIDGLRRAGVSWPEGEPA QAGPQLLAGKTLVLTGTLPTLKRDEAKALVEAAGGKVAGSVSKKTDYVVA GEEAGSKLEKAQELGVPVIDEAELMKLLAKGVE >Daro_1711 Integrase, catalytic region MIDKAHDLPVVRQVQLLELSRSSVYYQPQPIPEDDLRLMRRIDELHLEYP FAGARMLRDMLKLEGHGIGRKHVGTLMKKLDIQAIYRKANTSRRNQAHRI YPYLLRDLAIDRPNQVWAMDTTYIPMRRGFVYLSAVLDWATRRVLAWRLS NSLTSDPCVDALEEAIMKYGRPEIMNTDQGSQFTSSAFIGLLQESTIQVS MDGKGCWRDNVFVERLWKSVKYEEIYLHGYDTVSEVRQALARYFDFYNRR RPHSTLDGQTPDTAYFNQPLLAAAA >Daro_1850 Gram negative topoisomerase IV, subunit A MTDQLNLFDPNAKAAATEPEAPALPATETQELAPELPLETAAEPALEPAS ALPPDLPPSATGPASDIPSPADYAARRYLEYAMSVVTGRALPSAADGQKP VQRRILYAMHRMGLYKSPRHVKSARVVGDVIGKYHPHGDSSVYDAMVRMA QDWSLRYPIVDGQGNFGSRDGDNAAAMRYTEARLTPIAELLLAELDEGTV DWKPNYDGANDEPALLPARLPFALLNGASGIAVGMATEIPAHNLREVANA AVNLIRNPDFGEDEVLKLIPGPDYPGGAQIISSPEEIAATYRSGRGSLRV RAKWKIENLARGQWKLVITELPPGVSTATVMSEIEACSNPVAKEKAGKKV FTPEQLNLKAAFLSSISESGVRDESGKEHAVRLVIEPASSRQGQDDLVRM LLAHTSLETNASINLTILGVNGTPRQASLYSMIAEWCRFRLTTVERRTRH RLTAAEKRIHILEGRQAILLDIDRVIKVIRESDDPKADLMAHFKLSEIQA EDILEIRLRQLARLEGIKIGEELAKLREEAAGLNKLLDSEEALRACVAAE IEADAKKYGDDRRTLIEADAKVTMSDAKTVSIVDEPTTLIVSKHGWLRSR TGHNIDPTQLTFRSGDSLLACLPCRTVDSLIILDHLGRAYSISAADIPGG KGDGVPATSVVDFQDGGKLCLALSTSADKRYLVAADGGYGFRCQGSDFLS RGKAGKAFLTLGDGEAPAIFMPAPAEGEIACVTKDGRALVFNIEEVRLLA KGRGLKLIDAAPGKTALEEIIPVVDGVAGKLKGERLEICRGNRGGKGKPV KAPRK >Daro_3867 conserved hypothetical protein MSPMSQIQGFSPVVDARARILILGSMPGEASLRAGQYYANERNAFWRIIG DLIGAGPSLPYAQRLESLQAAGIALWDVIATCERYGSLDSDIVRGSVCVN DFPAFFAAHPGIESVYFNGATAEASFRRHVLPGLGGKELRLLRLPSTSPA HAARSYLEKLAAWSAITKQTPGVGSV >Daro_1712 Transposase IS3/IS911 MRRPRRNHTAAFKAKVAIAALKGDETLATLAEKFDVHPNQITQWKTQLLE NASGVFATAAEKQAATPDLKDLHAKIGQQALEIDFLAGALGRIGDASAKR >Daro_2489 hypothetical protein MNNWPRLLPTEKALLLSSGSDGLFYFLQLGKLCSSNRHGADQSEEIDEAI EPRRDGFPAEGGEANPQGSIPSGGGIRWSRGHTLNGYSNPAMEEALYDVP MLRRFAGLDAFEDVMPDESAILRFQRCRRSMTWP >Daro_4063 Crossover junction endodeoxyribonuclease RuvC MSITTPRILGIDPGLRVTGFGVIELHGKQLVYVASGCIKSNDKESLPERI KTLFAGISEVIATYQPNQAAVEKVFVNVNPQSTLLLGQARGAAISALVHA DLPVAEYTALQTKQAVVGHGKAAKDQVQAMVVRLLNLPGAPTADAADALA CAIAHAHGGQGLGAMATAGYRIRGGRLIG >Daro_2499 Resolvase, N-terminal MTTTKLVSYHRVSTSKQGSSGLGLEAQQASIEAYRNRIGASLVASFTEVE SGKNNERPELLKALHHAQVTGSILVIAKLDRLSRNAAFLLTLRDSGVKFV AADMPEANNLTVGIMALVAQEEREAISRRTKEALQAAKARGTKLGNPNGA AALLKAGKGNAAGVVAVKAKAEEYAKQMRPVIEHLQAQGKTSLGALAEAL NGGGYRTPRGGAWHKTSVGNLLERLALAA >Daro_1872 hypothetical protein MNTKISSLLLSALLFTACTPMEGRGGLDSSSPRRGEMEGGSGDGSAMVVD NLQAQLQKTAEALTLTPTQATLWDAYQERVGALMADQMKLQPYRAIRLNA MQQIDQKVETVRNRLTAMEEIQETASKLYSALNESQKKTADQMLPGTVPA LYSGLRNAGDGGGERNNSRRNGPDGGMRGPGGGMGGFGRM >Daro_0527 DNA primase MIPDSFIQDLLARVDIVDLVDGYVPLKKAGANYAACCPFHNEKSPSFTVS PTKQFYHCFGCGAHGTAISFVMEYQGLGFVDAVKDLATRAGMQVPESEGR SFKDEKPGQTRTLIEIMARAAAYYKDQLKKSPHAIEYCKKRGLTGEIAAR YGIGYAPDGWQNLQEVFPDYNADELKIAGLVIENEAGRRYDRFRDRLMIP IINPKGEIIAFGGRIIDQGEPKYLNSPETPLFEKGRELFGLPQARQALRE TDTAIVTEGYMDVIALAQNGVGNAVATLGTATTATHVTKLLRQVDRIVFC FDGDNAGRKAAWRALENSLEALADNKRLGFIFLPQEHDPDSYIREFGKEQ FDRQVTQAMPLSDFLLRELAQRCDLTSSEGKAQLIYEAKPLLLKLPTPLL RLQLVKRLAEASGFAQAEVERLCELKSYTPAAPPKAKRTAPSLTRNLLRI VLHKPQLAAQLPIALLPDTPERAALTRLHQLVTANRETSSYAGLREQLRG LPEESVIENAASELLGLPFDEEGAEMEFRDTLEKLQEGGEKRAFAELQVK AQQFGVAGLSAAEKQAYIQFLTTKANRS >Daro_2555 DNA repair protein RadC MNMSILSRADLVRELLAPTVCASSALPLHVSDAVANMGMGNLPETELAHR LDVARELLLRDLREQMCDSPVMASPQVLRDWLRLHCAGLQHEVFLVIYLD AHHRLIEAEELFRGTLTQTSVYPREVVKGALTRNAAALALAHNHPSGEAE PSRADELLTQTLKSALSLVDVRIIDHFIVAGDKVVSFAELGLI >Daro_2531 Phage integrase, N-terminal SAM-like MSTFNASHSRRRAQGSIGSGRAAQHQPARRQEWASLTPTEILSRYRPGKA DPLQVLDVLLELFNTQHTALDKTVSHKTRQERADFLRRFFRDLKVKANFA TVPDPRNLGDRHIRAIVAVWREERLAPATIQTYLSFLRGLALWLRKPGFI RSPAYYGLSPNEYQRDENAQRDKSWTAASIDIDAVVEQVIAFDRYVGASL GLIRTFGLRRKESVMIRPHLCVVPFEATGLPPGERQADNYVRIKEGAKGG RRRFVPLDSEQRIAALEFAQAVVPGEEAHLGDPRHSLKHNLRRFDYVMAK FGITADGLGATAHGLRHEAMIDHYTTKAGGTPPVRGGGDVPPEEDAAARL SAARLAGHNRARAAGAYLGGLLPRQAALKDQAKDSLPCTSDAEKSPGGH >Daro_2237 putative ATPase involved in DNA repair MQPLSLTLKGFRGIRDGLGRDVLKLDFERLADGAELVAIAGANGRGKTTV MDNMHPYLTMPSRAAMAGPGGFSYYDHVCLPENEKDLIWAHEGRSYRSQV VIRVNGRRKTEAFLLMLADDGAWKPVVLDDGTVSDGKVDTYTRCVEALCG SADTFFTSVFSAQGKRQLSAYRNAEIKTLLADLLGQEEIRALGQQAGETA RLLKAGLAAIRQEQAGLDAEAQRIEGERRRLDGAQARVAQRLAGRQATQA AQESVRTRHAQLMAEREQSRGVEARREQLQGECHAVIQAGTQAIDALKAQ DQGESQRLERLTQRIAQRVTQERNRGQGLQNQRRECLTVLAGAQAVQRAE LHLPLAERVLSLRSAQIGSWRQQVQRLTQCQASERMVQQKLSGVEREAGQ AALKAEELARRFGLTGEVPCAGTDLQGQCQLLGDARDAKALIPSAQGTIQ RLGREKAAAQQELDALRGRQAELAGAPQALAWAEHRAEFARERASRFARL AAQAGEMARARTTLAGIEQELTELQAALGPDAVAGQPPVETPEEAAERQQ INVARQAIGAQHGQQAKHYRATLDRLNQALAALPEPCDEQRLIDAQTAME QAAQSVAAAEQAHLAAVRDAETLGAVVQQATALAGRQAQVANRIAKVETE LGNWNLFAKCMGNDGLIALTIDDAGPTLSGLANDLLLACYGPRFTVSIQT LVETGKGEQKEGFDILVHDGESGESKSVGLMSGGERVWINECLIRAVALY LAQHTGRRYGALFSDEADGPLDPERKRMFMAMKREVLRLGGYQREFFVSQ TPELTAMADAVIDMDLQGRL >Daro_2031 Recombination protein O, RecO MNLRSKVDSQPAYVLHSYPFRETSLIVEVFSRDFGRMALLARGARRPRSA IRGLLMAFQPLEIAWAGKGEVLTLMKAEWQGGLPLLAGEALFCGYYLNEL LMHLLPREDAHEQLFASYAKMLALLAADPSGKVREADLRCFEKALLQELG YGLTLNHDSDANLIEPDTFYTYRIEQGPVRIDHGEGATQVVRGKTLLDLD AEDFSDPRTRHEAKALMRMLMAYYLAGKELETRKIFKELQEL >Daro_2546 Helicase, C-terminal MARRSTAPSMWLPGFDPDEPEPPTLPKLAIPIVIPTVDAALAECIEATQI ETPEPAIVARASWRTTSQVVEAAPRILWPRLTSAGRLYPVGAVAKFEANL VAIDTLQRMENENRIPSAEERQALLRYTGWGGLPASFNLDTDEPAWAERA RRLQDLLPAEDYASGRASVNNSHYTEIHVIEAMWQAIHRFGFSGGRVLEP AAGIGHFIGTMPEDLAGCSTVTAIEIDRLSGRILQALYASGGADVRIAPF EKTPLPENWFDLVIGNVPFGKYQVADQSNRAYAHYNIHNYFLGRAIDLVR PGGLVCLITSSHTMESRQETVRQYLASQAHLLGAIRLPKGAFAGIAATEV QTDILFLRKRQRSETVEAEWLDITAVPNELRHPLAPPNRYLPINEWYMRH PEFCIGRIRSESNGYEEVPMAVFEGDLEAALRERIALLPTGVFEPVKHAT APLRVVVPAEAGARPGSFRLHQGRVHRVEGGELVDVHDQLNATQRGQITG MCAIRDHARTLLDAQLEDENNGRLGHQRAMLNGTYDRFVAKYGCLTARAN ALAFRRDPDYPLLLSLEHYDEESGTARKAALFSQRTLSRVVEPDRAGEPS EALAASVQWRGRVDPAYMAGLLEAPEAEVMAMLASAGHIFLDPMDGDWKT ADDYLSGNVKTKLKQAALSGPAYRRNVEALERVQPEDLPPAAIEPRLGAV WVPAHDVETFVQEVLELKDCQVGYSAEAGAWSVKYGEWEARQNVKVTQEF GTSRMNAIELVQCALNVQVPTVRDRDPETDKYYVNADETLAAREKLGLVK ERFATWAFSETERRERLCRIYNDLFNATRPRHFEGSHLKLPGFSRCFDLH PHQPDAVWRIVQSGNTGLFHVVGAGKTAVCVIASMELRRLGFANKPCHVV PNHMLAQYTAEFVRLYPNASVLMASKEDLEGDRRRELVSRIATGDWDAVV ITHSSFERIKLSPQFTEGYIKEIIHEIEMAVRAEKSNDRSNRIVKQLEAM KKSWQVRLEKLSADSKKDDLLTWERLGIDWLFVDEAHLHKNLYRFTKMTR VAGLPLTSSERAFDLFLKTRYTMQRHGNAQRGVVFATATPVANTMAEVHT MMRYLQPKRLEELGLQQFDAWAATFGESVTALEIAPDGSGYRMHTRFARF INVPELMAVFGEVADIRTAEMLALPVPKLRGGKPRVVACPASPSLKAFVQ TLVLRAEAIRNGEVDPKDDNMLAVTTDGRKAALDFRLVAPTARFDDNGKV AACVREVHAIWQRTMDFRGAQLVFCDLSSPKGGKTFSVYDDLRARLMAAG IPEKEIAFVHDAESDAQKAALFKAVREGRVRVLLGSTAKMGVGTNVQTRL VALHHLDAPWRPCDVEQREGRILRQGNLSEEVEIFRYVTQQSFDSYSWQT LETKARFIAQVMAGDKGIRSLEDVELAALSYAEVKALASGNPLVIEKAGV DAEVAKFSTLFSVWRNQRFANEGEVSRLPIMIEALENKIALYAQDLERVE TPTFQGLALELGRRRIVGADAVGEALRGLVKSAKDEVQTANRPIERVVGR FGGFDLGVRATRSGEVPNLYLSGHCLYQADPYQTGPALVAALLGALESIA KHHTDAGTLLATRQKRLEDLRLELTRPFEYEGRLTDLLIRQRELLRQLDL DKDEAGIGKIDTEDLRQTA >Daro_1715 Histone-like bacterial DNA-binding protein MNKTDLIDSIAAQADISKAAAGRALDAAVESIKGALKAGDSVSLIGFGTF YVGERAARTGRNPRTGKTLEIKAAKQPKFRPGKGLKDACN >Daro_0559 DNA polymerase III, alpha subunit MNSPRYVHLRLHSEYSVTDGIVRVGDAVKRAAGDSMPAMAMTDLGNLFGL VKFYTGARGKGVKPIAGADVWITNPDAPEDAYRLLLLVRNRVGYQQLCEL LTKAYLVEGRRDRAEIRREWFAELGSDGLIALSGAHLGDIGEALLNGNFD LAGERAKAWEAIFPGAFYLEVQRYGQPQQEAIVQQTADLAGELGLPLVAT HPIQFMNRDDFRAHEARVCIAEGYVLGDTRRPKLYTEEQYFKTQAEMVEL FADLPEALENTLEIAKRCNLTMTLGKNFLPDFPIPPGMTDGEYLVQEAKK GLEVRLAELYPDPEVRQQRRPEYDERLVFECKTILQMGFPGYFLIVADFI NWGKKNGVPVGPGRGSGAGSLVAYSLRITDIDPLEYALLFERFLNPERVS MPDFDIDFCQDNRWRVIEYVREHYGADAVSQIATFGTMSSKAVIRDVGRV FGLPYSMCDRISKLIPIVQNKPVSLAEALEQEPQLKQMMEGDGDGETIRE LFDLAGRLEDLTRNVGMHAGGVLIAPGKITDFCPIYQATGADASPVSQFD KDDVEKAGLVKFDFLGLRNLTIIELAVEYIRRMTGEKLDLMSLGFKDPAA YQILKDANTTAIFQVESEGMKKLLKKLAPDRFEDIIAVLALYRPGPLGSG MVDDFILRKKGQQKIDYFHPDLTACLSPTYGVIVYQEQVMQISQIIGGYT LGGADMLRRAMGKKKPEEMAKHRETIAQGAKEKGYDPALAEQLFDLMTKF AEYGFNKSHTAAYAVVTYHTAWLKAHHCAAFMAATMSSDLDNTDSVKIFY EDTIANKIKVLGPDVNVSNYRFEPVDRGTIRYGLGAVKGTGEQAVNVILK ARAEGGPFKDLFDFCMRCDKRMVNRRTTEALIKAGAFDTIAPEIAPGKGA DRCKLLATVGVAMDFAEQAERNAMQTSLFDMADVADEHAPEYVNVRPWDE KTKLMEEKTALGFFFSGHPYNTCKKELSRFIRRPLNRLEPAKEMTTIAGL VVGVRTQMTRRGKMLFVQLDDGTGMVEVSVFNELFEAERAKIVTDEVLVI EGKVSYDDFSGGNRVVADKLMTLGEARARFARHLLLKMNGNADAQRLKSL LTPFAPGSAPVRIRYRNELAECELVLGAASRVRLDDALLEALNGWLQPEN VEIVYQ >Daro_1920 Exonuclease SbcD MRILHTSDWHLGQHFMGKSRQAEHQALIVWLLEQVETQAVDAVLIAGDIF DTGTPPSYARELYNQLVGQLYKAGVPLLVLGGNHDSPATLGESRELLAHL GTTVIGATHTDPATQVIVLPQRNGEPGCIVCAIPFVRPRDVLQSQAGQSA EDKQLSLQTAIQEHYSAVFAAAVERQQALAAQLGPNFGRQLPIIATGHLT TVGASTSESVREIYVGALEAFPTTAFPPAAYIALGHIHRPQKVGGLDHIR YCGSPIPLSFDEAKQTKEMLLVDLDSDGLKAVTVLPVPRFQALVAVSGNL ESLAGAIGAAAAEGTRECPAWLEVTVAEDDYLADLPARIEALTEGWPVEV LRIRRQRGNATARLAAEARETLDELSPHDVFARRLQQEELGEEMQLALNE RYRAVVAGLQGEEA >Daro_2663 TraH MNHYDHPHLRRSAATFLALLLAIPSFQLQAGDLNSEVNNMFNNLGAIGNY TAPGAFRGQTFNTYTGGSLMMRSPNKVYQLAAIQFPSAKAGCGGIDVFGG SFSHISATEFKNMLKNITAALPGIAFQLALEAVSPLLGGLTKWAKGLETW INNARINSCETAKAIVSTAAESIGYSSQETCADLAIEMGMESDRDAARRR CATDRPSILSSARSSADPKVKNKAPFVGNLTWKALQYTGAYLDDPERELI MSLVGTVIYYPEESARDPEPIAPTLTSISQLLYGQGAAAGTDVVQHVLKC NDYTNCDVVTLNTTYTHTPFTAKVEAIMRSIAEKITTRTAIPNNSTEVGF VNQTTEPVYKMLSIGTSIPGSGLADSLIAQYRDVIAADYAYVFLERNLRL GMAALDKNYTLQQSQREQANQVRQRAQAMLTQLSQEKNLLYQKVGSFRAV SNHLEQLERQLRSSMPQHVMDMLGQQAAYLSQ >Daro_3426 ATP-dependent helicase HrpA MFRRWTFEKKLMKKQDAGQGRETPTAIGLTSDARRLSSLRAELRRSSGEK QQKLQADLAALIERSRAAVQERRAKLPKPEFQTDLPVNERRADIAELIAN NQVVIVCGETGSGKTTQLPKICLDLGIGARGLIGHTQPRRLAARSVATRL AQELKTQVGAGVGVKIRFHDKSTSESWVKLMTDGILLAESQSDPYLNAYE AIIIDEAHERSLNIDFLLGYLKQLLPKRPDLKLIITSATIDAERFSQHFS AHGKSAPVIEVSGRLFPVEVRYRPVVDIDKKDDERDLYDAIVDAADELSR LGSGDILVFLPGEREIREAAEALRKHALARPGLSSAHAPEILPLFSRLSA GDQDRIFKPSGGQRRIVLATNVAETSLTVPGIRYVIDTGLARVKRYSYRN KVEQLQVEPISQAAARQRAGRCGRVAAGVCVRLYDEADFNARAPFTDPEI LRSSLAGVILRMKSLKLTDVESFPFIEPPPAKAISDGYALLQELGGLDDD NRLTKVGDALAKLPLDPRIGRMLVAARDLGCLKEVLIIAAGLSTQDPRER PQERQQAADEKHKQFADEKSEFLSWVKLWGWFQNVVEHKKSNKQLIDNCH AHFLSYLRLREWREVHGQLHAMVTELGWKENDLPGTFDAIHQALLTGLLG NIGCKSDESGYYLGARGIRYLIHPSSPLQKKAGKWIMAAEITETTRLFGR CVARIEADWIEKVGAHLIKRQYFDPHWEKKSMQVAGWERTTLYGIVINPK RRIHYGPLAPAEAREIFIRQGLVGEEIDESFAKCWPFFQHNQKQIRDIEK IEHKQRRQDVLVDDELIFGFYDHLIPEGIHNGATFDHWRKTAEQENPKLL FLSKDDLMRHSAAGVTTEAFPHHIKVGGVEYGLTYHFEPGSPRDGVTLTL PLAQLNQIPVLRMEWLVPGLLKEKLVQLIKTLPQKIRAKLVPVPEFVEEF IAATAGNDKKMNQGLIPPLIDYILEARGLNARGWAVTPDAFRPDALPPHF SMNYKLIDEHGRQLDMNRSLLALRGEWGKEAKEEFADLHETPSEYTQLTD WTFGELPELMEVPVGKQTVIGYPALSDEGETVSLKVFDSAEEAAETHRKG LARLFMLQFKEQVRYFDKNVPGLTQMGMQYMPLGSTDELKRQLVDLSFER ACLTEPLPTTPEAFKARCAEAKARLGLIMQEVCRMVGTVLTEWQAVTKKL PAFKAHAAAVADIEAQLKRLLGKNFVVDTPFERLQHYPRYMKAIVVRLDK LKANPARDAQLMAEYGPLWSNYERRAIQLAKLGTLDPQVEQFRWLLEELR VGLYAQELRTPVPVSTKRLQKQWEGIKNG >Daro_2526 Phage integrase MGKLTVKELEALGNKDQGKKLREDGGLIGSVRCGANGASVYFDWRYRFDG KVKQIAVGAWPKLSLASIRSERDRLKVEVDGGSDPTERRKAERLKVKVDQ LEEIEKQQKRLDEIVAQQTRLTVRGLFEHWAEVDLIRRKDGGKEVRRMFE KDVLPKLGTLLVTDVKKGHITLVTDPLLARGVNRMAKLVFSLVRQMFRFA VDRDYIEADPTASIRKVKIGGPDTERERVLSRAEIQTLRHQLPSARLMPQ TEAAVWIVLATLCRIGELSSAKWSDIDLDNRRWRIPETKNGKPHEIYLSD FAVEHFRKVKVLSNPDIAWVYPGRDCKKALSSKSITKQLGDRQRSSEPMK RRSKSTSALALPGGKWGPHDLRRTGATMMTQLHVLPDVVEHCLNHIEENR TKRVYQRHTYEHEMQAAWKALGKNLTRLAGLHMNNTADSAAKNIPPPKKS PEARKNAASGTGAPRQLRTPALKNTPTAQTN >Daro_2284 Transposase IS3/IS911 MRRPRRNHTAAFKAKVAIAALKGDETLATLAEKFDVHPNQITQWKTQLLE NASGVFATAAEKQAATPDLKDLHAKIGQQALEIDFLAGALGRIGDASAKR >Daro_2037 Uracil-DNA glycosylase superfamily MSRFQDPTNCIACSRLAEHLATIRQRDPDWHALPVPAFGSLDAELLVVGL GPGEKGANRTGRPFTGDVAGELLYPALHRFGFASSPEPLGSDGWANPTMQ LTNCRITNAVRCLPPANKPTTAEIRQCNAHLKAELAAMPKLKIIVVLGAI AHQALLWTYGLKAKDLPFGHHVTHKLPDGRTLVTSYHCSGYNWRTGRLTR ESFEAVFAGVKAHLA >Daro_1654 Transposase IS3/IS911 MRRPRRNHTAAFKAKVAIAALKGDETLATLAEKFDVHPNQITQWKTQLLE NASGVFATAAEKQAATPDLKDLHAKIGQQALEIDFLAGALGRIGDASAKR >Daro_3666 Helix-turn-helix, Fis-type MSQQDISACVLGALEQYFRDLDGEKPCAIYDMVLKSVEKPMLEVVLSKAG GNQTMAADMLGINRNTLRKKLTEHQLL >Daro_2208 TatD-related deoxyribonuclease MSTSNGLVDFHCHLDLYPDHQAAVMDAEEAGVFTLAVTTTPRAWPRNHEL AQRTKHVRAALGLHPQLVAERASEIELWDRYLPETRYVGEVGLDAGPRFY KSLDLQKQVFQHVLRRCAEAGDKVITIHSVRAVNTVLDHVESFLPQSRGK VVLHWFTGSKAEALRALELGCYFSINAAMLGNERHAPIVALIPLDRLLTE TDGPFTKTDERPSRPADVRDVVEALGRLHGMAASAVAATMRVNLRALLEP NGGPKNDSVLPSKAANQ >Daro_0645 NUDIX hydrolase MLDREGYRPNVGIILCNGRNEVFWGKRIREHSWQFPQGGIKRGETPEEAM FRELYEEVGLLPEHVRILGRTKGWLRYEVPTHWIKREWRGSYKGQKQIWF LLRLVGRDSDVNLRATNKPEFDAWRWNDYWVPLDAVIEFKRLVYEQALNE LVRFLDFDRKGPRHKKEQEPFSDVVDSVRSEE >Daro_2558 putative ATPase involved in DNA repair MQPLSLTLKGFRGIRAGLGRDVLSLNFEQLADGAELVAIAGANGRGKTTV MENMHPYLTMPSRAATAGPGGFSYYDHVCLPENEKDLVWSHAGRTYRSQV VIRLNGRRKTEAFLFALSDGGAWKPMALEDGTVADGKVETYTRCVEAICG NADTFFTSVFSAQGKRQLSAYRNAEIKTLLADLLGQEEIRALGLKAAETA RLLKIGLATIWQEQSGLDDDAQRIAGDLRRLEGATGRVAQSLAARQGALA TLEAARSQHAQLAAEREQSLSVELRRTQLQGECSAVIQAGTEAIEALKGQ EQGEAQRLERLEQRIAQRLTQDLNRRQALHNRRHQCLKVLASTSTVQHAK ARLPMAEHALSLHRAQVAHWRQQTQHLTQCKASERLILQKLSGIEREAGQ AALKAEELARRFGLAGVVPCAGSDLQGQCQLLADAREAQALIPSAQAAIK RLADQKAAAQGELAALGGQYEGIAAAPQKLAWAEHRAEVADVRGSRYAVL AAMAGEQARAKSALAEIEAELAAQDGETSFCQQEAETPDELAERQQIGAA RQAIAAQHEQQAKHYRATLDRLKQVLATLPPCYDEQRLSESRRNMEEAAQ LVAAAEQNYLSAVRDAENFAALAQQAAALATRRAQVTSRVAKVQSELGKW TLFAKCMSNDGLIALAIDDAGPALAGLANDLLLASYGSRFTLSILTQVET VKGEQKEGFDIQVHDGDTGESKSVSLMSGGERVWINECLIRAVALYLAQN TGRCYGTLFSDEADGPLDPEHKRMFMAMKRAVLCLGGYQREFFVSQTPEL TAMADVVINLEVCAQMPA >Daro_1230 DNA gyrase, subunit A MDQFAKETLPISLEDEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLF AMHELNNDWNKAYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQDFSLRY MLVDGQGNFGSVDGDSAAAMRYTEVRMAKIGHQMLEDLDKETVDFGPNYD GSENEPLVMPARIPNLLINGSSGIAVGMATNIPPHNLNEVIAGCLALLEN PALSIEDLIAYIPAPDFPTAGLIYGMTGVREGYQTGRGRVIMRARTHFED MEKSNGRQALIVDEIPYQVNKKSLIEKIAELVNEKKIEGISDIRDESDKS GMRIVIELKRGEVGEVILNNLYKQTQLQDTFGMNMVALVDGQPRLLNLKQ MLECFLSHRREVITRRTVYELRKARERGHILEGLAVALSNVDEIITLIKA APTPADAKRGLMERTWRSAVVEEMLVRAASDASRPEGLAPEFGLSAQGYR LSDAQAQAILELRLQRLTGLEQDKIVGEYKDVMAKILDLLDILAKPERIT EIIVTELVAIREQFGDERRSEIILQTHELSLEDLITPQDMVVTLSHGGYI KAQPLADYRAQRRGGRGKQAAAIKDEDFVDHLFMANTHDFILCFSNRGRC YWLKVYEAPQGSRVSRGKPIVNLFPLEEGERINAVLPVKEFADDKFIFMA TRAGTVKKTPLSDFSNPRKAGIIAVDLLDDDYLIGVELTTGQSDIVLVSN AGKAVWFDEEDVRPMGRGARGVRGMKLQAGQAVISLLVAESDQQTVLVAT ENGFGKRTVLADFRHSGRGTQGVKAIADSERNGVVIGAKLVDDNDEVMLI TTGGVLIRTRVSEIRGMGRATQGVTLISLDDGEKLAGLEKVAESVAEAEV EGESEVVAPETGDAAPSEGDVASNEGGEV >Daro_2038 Excinuclease ABC, C subunit MSFDAKAFLATLTELPGVYRMLDIGGNVLYVGKAKNLKKRVASYFRENLS SPRIAHMVSQIASIETTATRTEAEALLLENNLIKSLAPRYNILFRDDKSY PYIVLSKGKFPRLGFFRGNPDRKADYFGPYPSSWAVRDSIHLMQKMFRLR TCEDTVFSNRSRPCLLYQIKRCSGPCVGFISADDYAADIQLAAMFLLGKQ QEVTRRLTKSMEEASAKLAFEQAAVFRDQIQSLHQVQEKQFVSSSKGEDV DVLVAIKEAGQLCVNLAMVRGGRHLGDRPFFPTNAADSEPSDACAAFIRQ HYAAHPAPARILSYPLPSEDEAGETEVALAELAGRPVPVQEGRGATHKAW VEMAIQNARLAILAKNQATAQQEQRLAALQDALQLPEPIARIECFDISHT MGEATVASCVVYEGNRMKKSDYRRFNIRDIQAGDDYAAMRQAVSRRYDSI AGGEGTAPDLILIDGGKGQVSSAFSALADLGLTHLPMIGVAKGEERKPGL ETLIFPEGREPLQLPPQHPALHLIQEIRDEAHRFAITGHRAQRGKARKTS KLESLPGIGPARRKALVARFGGLPGVLAASIDQLAEVPGVSREMAEKIHS ALH >Daro_3677 Ribonuclease H MAKRRKKKIERVIHLSAGPLPQRLAERFIDHRLIFSDASQLRHGGLAAVL FEQPDSEAVIATRTVAVTGSNELELQAAVFALEQASRHFPGEPAALFSDN QDAVSRLNQAKTRGLAQDPELTGIFAALDLGVLLANARIVWIKGHSSCRG NALADQHARVAAS >Daro_3024 NUDIX hydrolase MTIDLERLRASLLPEPLAGHFVQEDGVDDQPLTPAAVLFPIVLREAGHTV LLTQRTAHLRDHAGQISFPGGRVEEEDLSPIHTALRETEEEIGLPRERVE IVGFLPEYRTGTGFRVTPVVALVRPPFDLQPDPFEVAEIFEVPLSFLLDP ANHQQHSLHYRGALRNYFAMPYGEYFIWGATAGMIRSLSERLGLLHGA >Daro_1433 Integrase, catalytic region MKQRPRIYYTDSQKALMWERWRKGDSLQKIAQLFDRNHSSVQGVLAETGG IPPAPRCRSKRSLTLAEREEISRGLVAGLSIRVLAAQLGRAPSTVSREVK RNGGRECYRATQADQATWTRALRPKPCKLTENPGLAHIVANKLQSLWSPE QIAGWLKRTNPDNASNQVSHETIYRTLYIQTRGALKKELLAYLRRTRAMR RSRHHTQKTADHGRIVDAVSISERPATADDRAVPGHWEGDLLCGSKNSQI ATLVERQSRYLMLVKLSGKDTGTVTNALIKNARKLPQDLYKSLTWDRGKE MAGHKRFTLATDIQVYFCDPHHPWQRGTNENTNGLLRQYFPKGIDLSPYS QAKLSAIARKLNERPRKTLNYETPAQRFYQTVASTG >Daro_0123 AP endonuclease, family 1:Exodeoxyribonuclease III xth MLRIISLNLNGIRSAWSKNVLPWVAAQNADVICLQELKAQLPDLTPEMMA PDGMQAFYHCAEKKGYSGVGIWSREKPDRVIEGFDGGEFDAEGRYIRADF GNLSVISLYLPSGSSSPERQEAKFRFLDVFFPQMLALRAEGREIVLCGDW NIAHQAIDLKNWKSNQKNSGFLPEERAWLSRLFEEQGWVDVYRRLHPETT DACYTWWSNRGQAWAKNVGWRIDYQIATPGIAVMAVQAEVYKDERFSDHA PLIIDYDFK >Daro_0003 DNA gyrase, B subunit MSEENTPMSSPQDAGSPAYGESSIQILEGLEAVRKRPGMYIGDTSDGTGL HHLVFEVVDNSIDEALAGHCNDIIVTIHTDNSISVIDNGRGIPTGVKMDD KHEPKRSAAEIALTELHAGGKFNQNSYKVSGGLHGVGVSCVNALSKFLRL TIRRDGKKHFMEFCRGVPVDRSIEVRNGLEVSPMKILGDTEKRGTEVHFL ADEEIFGHVEFHYEILAKRLRELSFLNNGVSIKLVDQRTGKEELFAFAGG VQSFVEYINRTKSVLHPSIFYSAGEAKVGQGAADTGIIIGVEVAMQWNDS YQEQVLCFTNNIPQSDGGTHLTGLRAAMTRVINKYIDENEIAKKAKVDIA GDDMREGLACVLSVKMPDPKFASQTKMKLVSSEARAAVEEVVAQKLADFL LERPVDAKMICGKIVEASRAREAARRAREMTRRKGVLDGVGLPGKLADCQ EKDPALCEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNVEKARFDKL ISSEQIVTLITALGTGIGKDDFNVEKLRYHRIIIMTDADVDGAHIRTLLL TLLYRQMPELIDRGYVYIAQPPLYKVKHGKTERYLKDDQEYHQFLLNMAL DEAVLTPRADAEGITGPALEGLARSWLATEAVIDRLSHLINPEVLQSIVR HNIAIDLSSEENARASAERIAGFIPAGTRMVPKFDDIQERWILRVERMHH GNLKVGLIDEDLLLSGDFTQLRRTAETLADMFGAGATMARGEKKQVVTNF ADAMKWLLNEVERGIAKQRYKGLGEMNPEQLWETTMDPKVRRLLRVQIDD AIAADEIFTTLMGEDVEPRRAFIETNALSARVDI >Daro_1633 DNA polymerase III, epsilon subunit MKAKYRLIVAVIVLGLLMTGPFVVTSLLVWLDMKEAERGMLTNLLVSRLP VGTMMTLFGFVIGVLVLHKLFKQYVEGLLRMAETLRLMLGANRNFRVTIE GPPEVQQLAQAANDLAQQRDALMDDVDSQIAIAKASVEEEKNRLAALMSE LAQAVVVCNLDGRILLYNNRARLQFKALSQGPTSVAGGALIGLGRSIFSI LEKGQIEHAREVIHQRLIAGKTAISNFITTTRGGQLLRIQMVPVLATSPG EAAEVSMSGYVLTVENITRSIEEEERRDQALHTLTQGSRSSIGNIRAAVA NLLDYPDMEAELRERFLRVIDDEVAKRSVVIDQTMSQFSDAIKTRWPLED ILGIDIIAAAQRRIDDKLKLPTKTEEMDDALWIKADSFSLVFALVCLASK LQDHYEPRELRFRLTSSGKLAYLDLIWAGPAMSSETFYTWEMEAMQVGSE TSPLTLRDVIDRHGGEIWYQREKAAHRAYFRFVLPVATPELEQDQEERTR GKGRPEYYDFDLFKFEDKSIDLDRKLSDLTYTVFDTETTGLEPSNGDEII QIGAARIVNNRLLRQETFNQIVDPEIPLKPASIPIHGITEDMVRGQPNID VVLPAFHEFCEDTVLIAHNAAFDMRFLQLKEERTNIRFTQPVLDTLLLSA VVHPNQESHKLDVILERLGITIGKRHNALEDALATGEVFLKLVKLLEDQG IVTVRQALEAAEKTYFARVKY >Daro_3059 Exonuclease VII, small subunit MDQTPIADMKFETALAELEDIVASMEGGKLELEASIAAYKRGMELMKHCQ NQLADAEAQIRVLENGQFKDVDRSTLEAQ >Daro_1298 AAA ATPase, central region MSDLFSSNAVDRNAPLAEQLRPLIPDEVIGQQHLLGPGKPLRLAFESGQP HSMILWGPPGVGKTTLARMMATQFKCEFIALSAVFSGIKEVREAVVQAEM WRGQGKRTILFVDEIHRFNKAQQDGFLPFVESGLFTFIGATTENPSFEVN SALLSRASVYVLKSLDEAEMGTLFDRACDRALADLSFDSGARERLIGLAD GDARRLLNLLEQARTAAHAAGIAAVDGAFIESTMAQNLRRFDKGGDAFYD QISALHKSVRGSSPDGALYWFCRMLDGGADPRYLARRIIRMAWEDIGLAD PRAMQIANDAAETYERLGSPEGELALAQAVTYLAVAAKSNAGYNAYNAAR AFVKQDGSRPVPNHLRNAPTKLMKELGHGKAYRYAHDEPEAYAAGERYLP DGMSEPGWYAPTPRGLEGKIGEKLAHLRDLDRKAGKK >Daro_0826 Protein kinase:Protein phosphatase 2C-like MPLQVALGYASLTGPRERNEDFCGVATPEGQDLDNKGVIAAVADGIGGHK GGREAAEYTVRGLLADYFATPDTWSVPRAIETVSTALNRWVIAEGSRNAE LAGMATTLSVVVLRGRRFYTAHIGDSRIYRFQEGRLHQLTVDHTWEHPEL NNVLSRAIGLDPRVLMDFADGELALNDRFLLISDGVWGVLPDALIADVLL DHPEPQGAAAALTSLAIAHGGHDNASAVVVDVLALPPANLRDSLEGAASL PLPHRMKPGHELDGLVVEDILHDSRETLLYRVSNPRNGQQLVLKTLQPGM EGDPEATAALLMEEWRARRVVSPFFPQVVPAEQRSCLYYLMTWHAGATLQ VRLDGDQHFPVGEVVRHGVALLKAIASLHRLDIVHRDIKPDNIHLGQDGV LRILDLGVAVSLAERKAGDPIGQAGTPSYMAPELFENPEPQAGYDLYAAG VTLYHLLTRKYPYGEIEPFQTPKFGEPTRPTRWRPEIPGWLENILLKAVA KEAKDRFETAEEFLLALERGAARPIAAPSRQPLVQRNPLQFWKGVAAISL AINLILLLKLLR >Daro_1129 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal MSEDTTAGQSFDTLPLSPAMLANLAQLEYLSMTPIQAASLPLALAGNDLI AQAKTGSGKTAAFGLALLNRLNTSRFAVQAMVLCPTRELADQVTQEIRRL ARFEENIKVLSLVGGSTLRNQANSLEKGVHIVVGTPGRIMDHMERGYLKL DELNTLVLDEADRMLDMGFHDDIAYVAKRCPAQRQTLLFSATYPEGIALL ARQFLRQPKEVKLLELHEETKIRQRFYEVKDDERLDAVVRLLKHYRPVST LAFCNTKQQCRDLVNVLRHAGIHALTLNGDLEQRERDQVLIQFANRSCSV LVATDVAARGLDIDQLEAVINVDVTPDPEIHIHRIGRTGRGDEEGWALSL CSSGDRRRVATIAEMMKCKLDVLDLKTVEVTDDSPLVPPMSTLLMLGGRK DKIRPGDVMGALAGEAGLTREQVGKITVTDQSTYVAVARAVAKETVRKLS AGKVKGKTVKVRILTN >Daro_0438 Protein kinase MAIEQLGRFKITGTLGQGAMGTVYRAHDPLIERTVAIKTVACAGLSKDEA LAFEQRFYREAKSAGRLSHPNIVTIHDVGRNESLAFIAMEYLNGQSLREL LDSGVVLPPERCTEIAADVADGLAFAHANGVVHRDIKPANIMVLDNGSVK ISDFGVALIPSGSTTVEGTAFGSPKYMSPEQVTGQKVDGRSDIFSLGAVL YEMLAGRPAFDGEELTAVLYQVLHAAPPLPSSFNPELPRVFDRLIAKSMA KDPDKRYQNATDLAADLRKCRRMLREARKKAEGDDQVRNKRQGRDASSPA LVKVNPSPWLTAAALASVVSIVGALFWYYGSKPRFEAAPAVSVAENASSP LVPAPESLAPKVPGVATEGGSKAAKVKSESAASVPVALADGVVRLAIAPW GEVFVDGKMAGVSPPLTEVRLSPGKHHVEVRNTNFPPHRQVVEVVADKNI RIKHKFQ >Daro_0163 DNA polymerase A MPLLLLVDGSSYLYRAFHALPDLRNKAGEPTGAIYGVLNMLRRLESDYKA EYKAVVFDAKGKTFRDDWYPEYKAHRPPMPDDLVQQIEPLHAAIKAAGWP LLMVDGVEADDVIGTLATNATADGIETLISTGDKDLTQLVSSHVRWYNTM SNELLDEAGVEAKFGVPPGKIVDYLALVGDTVDGVPGVAKCGPKTALKWL AQYGSLDEVVAHANEIGGVVGQNLRDHLGFLPLGKRLVTVACDLSNLPAP STLTTTARDTATLRELYTRYQFRTWLGEIDGPEAAAAVPAREVSETPAAA PTAAIAVHYETVLSWPQFDAWLAKIEAAELTALDTETTSLDSFAARIVGI SLSVTPGEACYIPLAHTAPGVADQLPREEVLARLKSWLESAAHKKVLQNA KYDQHVFANHGIALSGIAHDTMLQSYVIESDKGHDLGQLCTRHLGLATIA YEDLCGKGAKQITFDQVDIERAATYAAEDSDVTLRVHNVLHPQFASEPGL SRIYHEIEMPARQVIWQIERNGILIDSDVLSRQSHEMGQKIMALEAQAYE LAGQPFNLASPKQLADILFEKQGLPVKKKTPSGGPSTDEEVLSELALDYP LPKLLLEHRSLSKLKGTYTDKLPRMVNPQTGRVHTHFSQAAVVTGRLASS DPNLQNIPVRSEEGRKIRTAFIAPAGSSIVSADYSQIELRIMAHLSGDER LLDAFAHGEDVHKATAGEIFGVTPLEVGPDQRRVAKSINFGLIYGMSAFG LARQLGLERSAAQTYIDRYFARYPGVARYMEEARESARQHGYVETAFGRR LWFPDIRSSNGNRRQGAERAAINAPMQGTAADLIKLAMIAVQNWLEKSAL KSRLILQVHDELLLEVPDGELMDVRTHLPRLMGQVAELKVPLVVEVGVGP NWEAAH >Daro_0466 Competence protein ComEA helix-hairpin-helix region MSVRPEPKTGGILTNSPFWRENMKSRFLLLMASCLLWAGVALAQININTA TPEQLDGLKGIGPTKAKAIVDYRKKNGPFKSVDELQNVPGIGPATLKDLR PDVVVSGTSRAPVTASTPAARPLAETPKPAALPPARPMVKSNQEAARPAA PALPGKTAPAPVAAEKPATPAGPAKPAMPGKPAVDSKPQAVPAVAAEKLT APAAPARPAMPGKAANEAKAAAPASAMKPASPPAVPAKPASPATKPAAPA APAKPAAPAGPAASY >Daro_0537 Tyrosine recombinase XerD MKIASQADLSEIDNFCDALWLEDGLAKATLDSYRSDLSRLALWLANNASE PLLDLHETTLTAFIAHLAKQTRATSQARYLSTLRRFYRWQLGRGRIVADP TLKLANPSRPSRLPKVMSEKQVEALLDAPDLDTPLGLRDRAMLETIYATG LRVSELVNLRLHEVSLADGVLRALGKGSKERLVPLGQLAIEWIKRYLNEA RPDILNGQHSDDLFITARGGGMTRQAFWQLIKRYALIAGIAPDKLSPHVL RHAFATHLLNHGADLRVVQLLLGHADISTTQIYTHVARERLKTLHAVHHP RG >Daro_0467 conserved hypothetical protein MSDSLTLCATTRLAQTLRGELPAEQAVWRTRQALTLGQWLATLADEALLS GIADLPVALDAFSERLLWEKVIAAALTEAAPLFDIQGMAASAAEAQALCR VWKLKPGGGELSDEAKLFIGWQADFDKRCRAAGWIDAAGLQRQLIELIAA GHFALPSVIILAGFDRYTPLEQDLMAALAVRGVIVESSPDFPVEGSAQER LACADVEAECHAVVAWAREQLVARPDCRLGIVAPDLAGVRDRLEFLLDDV LHPALIRPDAAEVPRCFNFSLGRALADLPLIRVGLDLLALGSGRAKVEQG RLSGLLLAGGWSAAEAEADGRARLDAALRRDLPYFTTLPALIKLAGRLAE NEPPLCPQTIAALEAFVETAGAATRKLLPGQWSGVFRNCLKAAGWPGDRP LSSHEFQARQAFGEVLDGFGRLDALLGPLAFAEAVRRLSQLCRQRLFQPE TRGRPAIQVLGVLESAGLGFDALWVMGMNDDQWPPPPRPNPLLPAEMLRA VGAAHASAEVELDFARRVHVRLSHSAPVVTFSYARAEGNRVLRPSPLIAG IPLAGEKNAELETLARQMAGVAVSSVDQIDDALAPPVAEGEKVSGGSWVL RAQAICPAWAYYQYRLGGEAMEEPVEGLDPAARGTLVHEALEAFWTAIAS FDALVALDEAAREQAISEAVGKALQHFELDRRTTLPARFRELEAARLAKL LDLWLQVEARRGLPFEVVACEQPAEVEIEGIKVKMVVDRIDRLADGRQII IDYKTGAAIDTKNWAEQRITEPQLPIYAALVNDEVTAVVFAKVLLDKPGF AGVADEKDILPGVQGIGDDKQKIFDPAEFPDWIAVITHWRERLHAVAKEV KAGQAGVVFANEKDLQYCEVLPLLRLPERRRLLAGFVAHSGSEAANRLLG QTFPVSSSEIGR >Daro_3525 C-5 cytosine-specific DNA methylase MTTEVACQHFEVGFECRVTQKMAEKNTMKSTKAKPRAIDLYSGIGGWSLG LEMAGIEVVASYEWWDKANRTNHKNNQHLATEIDIRQLRLEDLPKNIDIV VGSPPCTQFSFANRGGSGDIEDGLKDIAKFLAVVDYVRPKHWAMENVPRV ASIIEKEMQIGGRLAHFSHLKPVIKIVDTCEWGVPQRRQRCIVGNFDFGL LQSYKEHTKPRTLGDVVSVLSQATITDPIYGIEVAREELTDHVIEEFLSA EEERMNREMKTYHPVYNNMAFPDPLNRTARTITATCTRVSRESVVIAAPE QKGRFRRLTVRERGCLQGFPITYQFFGDSYAQKLKMIGNAVPPLFTFYVA QAMLGISPETLIQPNEGIGRFVGTEERPKVTRPDTAGDSYSSTRRFRAAL PHLRFKSGVRFELANSFVGSVPEWRVKFFFGNSKNITELPLSDGLLKKLK ASKEVEGVLPQVMTSIAHVDQVISSTDAQTLQRVWTHTLEHRFHPYDVVD VLGQATEETITLLCKHNRGSEGVIAKILEDMGYPQGSDKVLKYSDAVLAG LLVGAFANLRFCDPSFSNSKG >Daro_1037 Phage integrase MSLFKRKDSSCWWVKIIIDGRKVQRSTGTDDKIKAQEFHDRLKAQMWEQN RLGVKARRSWKEAVVRWLEETSEKATHNEDKRKLIWLDTYLGKLMLDEIT LDVIDSVRAAKLKEAAKATTNRYLALMRSILLRARDEWEWIDKVPKVRLF KESASRERSLTREQAGKLLEELPQHQRDVVLFALATGLRQSNVLQLEWSQ INLEQRHAWIHAWQSKNRRPISIPLNEAAYSVLIRQKGKHESRVFTFRGK PLESANTRAWRKALLRSGIDNFRWHDLRHTWATWQRQAGTPTHELQRLGG WRTGAMVERYAHLAPDHLAEAASRLNSVIPGYVSATVT >Daro_2194 TatD-related deoxyribonuclease MLVDSHCHLDFPDLANRLPDVLRHMQDNQVGLAVCIGVNLEDFPKVLALA EHEPRLFATVGVHPEYTDVEEPDENRLVELASHPKVIAIGETGLDYYWQK DQPEWQRDRFRTHIRAAKRCDKPLVVHTRDSALDTLMLLKEEGADAVGGV MHCFTENWDMARQALDLGFYISFSGIVTFKNAAIVKEVAQKCPLDRILVE TDSPYLAPVPYRGKPNEPAYVRYVAEEIARLRGLSFEELAAATTNNFFRL FKHACRP >Daro_2003 Excinuclease ABC, B subunit MSETNTGTPVVTFEGSPYRLHQPFPPAGDQPEAIRQLVEGLDDGLSFQTL LGVTGSGKTYTMANVIARTGRPALVLAPNKTLAAQLYSEFKEFFPENSVE YFVSYYDYYQPEAYVPSRDLFIEKDSSINDHIEQMRLSATKSLIERRDVV IVATVSCIYGIGDRDEYHNMILTMRVGDKLDQRAIVKRLTDMQYERNEMD FHRGTFRVRGDIIDIFPAEHAEHAIRISLFDDEVEGMQFFDPLTGHLLHK ALRFTVFPASHYVTPRATVLRAVEAIKDELRERIDFFTRNNKLVEAQRIE QRTRFDLEMLDQIGFCKGIENYSRHFSGRKAGESPPTLIDYLPPDALMFI DESHVSIGQVGGMYKGDRSRKENLVDYGFRLPSALDNRPLQFNEFEAHMR QTIFVSATPADYEQQHAGQVVEQVARPTGLIDPEVIVRPASTQVDDLLAE IGKRIAVGERVLVTTLTKRMSEDLTDFLADNGIKVRYLHSDIDTVERVEI IRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQT IGRAARHIHGTAILYADTVTQSMQRAIAETGRRREKQIAFNLEHGITPRG VSKKIKDIIDGVYDAGSAQTELKAAQQRAAYDAMDEKAVAREIKRLEKSM MECAKNLEFEKAAAARDDLFRLRERVFGAAQHDLDGDGTK >Daro_1756 Ribonuclease HII/HIII MPELIVPVGLVCGIDEAGRGPLAGPVVAAAVILDPERPIVGLNDSKKLSE KKRDALAEIIRERALAWAVAEATVEEIDRLNILQATMLAMQRAVAALQVK AESALVDGNRCPKLDIPCEAVVKGDGKIASIAAASILAKTVRDAGMLVLH AQYPHYGFDRHMGYPTAAHFAALEAHGASPVHRRSFGPVARQLSLL >Daro_1593 Ribonuclease H MTAEETVEIFTDGACKGNPGPGGWGAILRLGPHEKELWGGEKETTNNRME LTAAIRAIEALKRPIGGKIYTDSQYVMKGINEWIHGWKKNGWKTSDKKPV KNADLWQLLDAQVKLHKLEWIWVRGHSGHPENERADALANRGIEELKG >Daro_3824 Transposase, IS4 MAVAINAIGIDDKATKMKRFIQGESRTQSTLLPAVLDDYIADTNPVRVVD VFVDELSLGVLGFASVDPATTGRPAYHPAVLLKLYIYGYLNRIPSSRRLE REAQRNVELMWLTGRLTPDHKTIANFRKDNGPAICKVCRQFVVICQQLKL FTEALVAIDGSKFKAVNNRDRNFTSAKLQRRMADIEASIQRYLTDLETAD RQEPEIAQAKAARLNDKIAALKAQMQQLQVIETRLGQSPDGQLSLSDPDA RSMKTRGAGIVGYNVQTAVEAKHHLIVAHEVTNVGIDRDLLVGMAKRARE AIGGGDLTVIADRGYFKGEQILACEEAGITAIVPKTSTSAAKAEGRFDKA DFIYDPTADEYRCPANQHLIWRFARVEGGLMMNRYWSSACPQCAIKAQCT PSDYRRVSRWEHQAVLDVMERRLDRAPDSMRIRRQTVEHPFGTLKAWMGA THFLTRTLEKVRTEMSLQILAYNLKRVMNLLGVNELMAALQAA >Daro_3652 Resolvase, N-terminal MATFGYGRVSTGTQTTDNQRLELEQAGYQIEPDFWFADDGISGKVAASQR PAFKALLGQIRKGETLVVSKLDRLGRDAIDVLQTVRQLGERGIRVVVLQL GNTDLTAPAGKLLLSMLAAVAEMERDLLVERTQAGLARARVEGKTLGRPS KTTQDERTEIRRRMGAGESVSALARSYRVSRATICAIKACAG >Daro_1395 Nitrogen fixation protein NifW MEDTLSLAEAMEDLVSAEDFLDYFAVPYDPAVVHVNRLHILQRFHDYLAK QAPNLPPEESQQRGIYRLWLERAYQDFVTSDSLTEKVFAVFQTVSKPDGG MSSFVSLDKVFRQ >Daro_2424 Transposase IS3/IS911 MDLKKRFSEEQIIGFLQQAEAGMPIKELCRQHGFSDGSFYNWRAKFGGMS VPDTKRLKDLEAENAKLKRLLAESILDAEALKAALGRKR >Daro_0064 A/G-specific adenine glycosylase MutY MATPNPFTEQLIAWQKIAGRHDLPWQNTCDPYRVWLSEIMLQQTQVSTAT PYYLRFLSSFPDVTALATAPIEVVIEHWAGLGYYARARNLHRCAQQIVTV YAGSFPDSVEKLAELPGIGRSTAAAIAAFSFGKRAAILDGNVKRVLCRQF GIDGFPGSVTIDRKLWTLAESLLPERDIEVYTQGLMDLGATLCTRSKPRC GDCPVAAACIARCEGRQAELPTAKPRTKVPERTATYVLLSDGHRLLLERR PPSGLWGGLLVPPEGEPDQVAARFGLQLGEQSKLPALKHTFTHFKLTLEP VLCRIEPRTDLGEAGLEWVNIDKAAQAGVPTPIRKLIKQVASAGG >Daro_2694 conserved hypothetical protein MRPNVREIATGKWRGLLLGFGLTERQLSGKHCSCPICGGNDRFRFDDKEG RGTYYCRCGAGDGIKLVMAVKGWDFKTAAREIEQAAGVVQAGPIHSPQGE AEKVEKLRRIWSESKPLQVGDEAMRYLAGRGLSLPVIPGSLRLHPNLAYY DGETFAGKFPAMVARVVGVDGSGLTLHRTYLQDGRKAPVDEVKKLMSGKS ISGGAIRLAPASRCLGIAEGIETSLAASALFGLPVWSCISAHGIETFVPP EAVEQLIIFADNDASFTGQRAAYATAFRLKQQGIEVDVRIPDVPGDWLDV LNATRKAAA >Daro_0463 probable site-specific recombinase MIKKLRACLYWFLGKTAPLGNPIANALERFRDAEADTLELTRQLVAVLRP QNRRDHAAPERYLAMLEQLESDASLRAAFRGHIVHFIATRRLVTFFTESG ILPGTGFFSEWWRILGSRLLPEVPDERRLKDCLHVIYDRASDWRWLEDIP AEASQRFWELIAPAEELRTIDWRSIQEQMLDGMLLLAHRVSGLGVESELM RASPNFDDDTPRFVALSAEALDFVNAFRAALNDPEQTPDDGSQLLVIADQ CQDTLQRIRKRALTIGTSLHLSYLLTRSEQSLERLRDLAAILTAGEQSTA RGEAIQAWVEFAHAAFLAENRRNSLRFYIGQLSHLLAVRVTENAARSGEH YICDTPADYGRMWRSAAGAGVLISLMALLKIKAAALHAPLFGEAFMFSMI YGLGFVIIFLLGMTVATKQPAMTAQTLASLIGDLKLNRSADLERLVDVIA AVSRSQLAAIAGNVMVALPVAIAVGLGLGFLADVPPITVDKGAHLLADLD PLSWALPHAAIAGFYLFLSGLITGYFDNRAAYADIGPRLARLRWLRAFFG QERAGRIGNYIQERLGGIMGNFLFGCMLGSTGVIGTILGLPLDIRHIAFA SANLGYALTGFQFELPLKAVAWAAFGIAAIGFTNLAVSFTLALRTAMRAR GIRFEHGGPLLKAIWVRLRLQPRSFLLPPRQASVDA >Daro_4060 Holliday junction DNA helicase RuvB MIETDKLTPAVDRTNLDRVVAPQTKSAQEEALERALRPKRLADYTGQVKI REQLEIFIQAARNRSESLDHVLLFGPPGLGKTTLAHIVAAEMGVNLRQTS GPVLERAGDLAAILTNLEPHDVLFIDEIHRLSPVVEEILYPALEDFQIDI MIGEGPAARSVKLDLPPFTLVGATTRAGMLTNPLRDRFGIVARLEFYTAE ELKSIVSRSASLLNAPIDPEGSFEIAKRSRGTPRIANRLLRRVRDYAEVK ADGNITRQVADAALHMLDVDPAGLDIMDRKLLSAIIDKFGGGPVGVDNIA AAIGEARDTIEDVLEPYLIQQGYLQRTLRGRIATPAIYRHLGLAEPASAV VRDLLAEE >Daro_2500 hypothetical protein MLDDLTKEIKAQLYERVKSPLFGAFAFSWVAWNYRALLALVSDLEFADKM AFIDKAYPTAWELSLHGALGPLISALLFLWLYPYPARFMYSYWAKQQKEL KKVQQSIEDETPLTQEEANALRKAGFAQAKEYQSQLKELSATNKELEERM KLLQEENGRLATERDQFGEAAKKAQEQAAPGLASVLAQHPPSVSKDAAVI FPNGDIRSKGKVISIDSLSDEQRFQLTQEIGNGAEIQRVMLALVVLDGEG DFDSIAGVAGLGKIETRHGLEVLRSEELVSASANSVKWFLTSSGRSLAVR LGLREAALKVTDGGVVGG >Daro_0913 ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ MKPSSLKTEQTALATAANALNVLRDVFGYPAFRGEQAEIIGHVASGGDAL VLMPTGGGKSLCYQIPALLRPGCAVVVSPLIALMQDQVDAMIQLGVKAAC LNSTLDWREAQAVEQAIFSGNLDLVYIAPERLLLDRTLAMLDSLSEAGKL ALFAIDEAHCVSQWGHDFRPEYLQLSALHERYPAVPRIALTATADQATRN EILQRLGLGEARVFLSSFDRPNIRYTVVEKDNAKKQLLTFLTGRKGQAGI VYCLSRKKVEETAEWLSTQGYPALPYHAGLPAPERAANQRRFLREEGLIM CATIAFGMGIDKPDVRFVAHLDLPKSIEAYYQETGRAGRDGEPSEAWMTY GMQDVALQHARIAESGAAEGQKILESQRLTALLSYCEAPRCRRQVLLNYF GEEREPCGNCDVCTEPPELWDGTQAAQKALSAIFRTGMRFGVTHLTDILR GKATDKVKQWNHDQLPTFGVGGDLDDHAWKSVFRQLAAAGLVHVDMAEHG ALQLTETAREVLKGQRTVQLRRPVKRKSTPSRSSSSTVVSDLSPADDALF QLLRKWRADTAREQAVPAYVILHDKTLRELAEVRPVSHGLLAGITGMGSA KIEHYGAELLELIRNEG >Daro_3164 DNA mismatch repair protein MWPHYNAPMPTIARLPDLLISQIAAGEVVERPASVLKELLENSLDAGSKA IQVHLEEGGVKLIRITDDGCGIARDELALALTRHATSKISSLDDLERVGT LGFRGEALASVASVARLSITSRERGAAHAWKLRGEPGAEPEPAALMAGTV VEMRDLYFNTPARRKFLKSESTEFAHCADAVKRLALTRPDVAISLTHNGR NLFQLAPADAPRRIADILGDEFLGAARAVDAGTGALSIGGFAIDPTRATD AKDGQYVFVNGRFVRDKIISHALREAYRDVLHGSRQPAVCLFVNIDPALV DVNVHPAKTEVRFRDSRAMHQFVFHAIQRTLAAPVQAEAAPALIERATPS SEYQAPALSPENRPNVEYAPPLRHQGSLGVAEPAAAAYLAFARAAQDIGQ SPAPRSEVAPQFQPIESTGSDGPPLGYALAQLHGIYILAQNARGLILIDM HAAHERILYEKLKTAFDNRQIATQALLIPAVFSADPLDIAAVEEHADALA DLGFQITPLGPNQLGVRAVPALLQSGDPAALAKSLIAELREHGITQLATA RRNELLATMACHGAVRARRQLTVPEMNALLRQMEETERAGQCNHGRPTWT ELTMDQLDKLFLRGQ >Daro_2838 RecJ exonuclease MTNITTRSSSPRVVWQLEQQGLHPLLARLYAARGIKDKSELDYELKSLIP PTALTHATDAAQLLADAIEAEAKMLIIGDYDCDGATATAVGMRALKSLGA DVDFLLPDRFKLGYGLSPEIVDVAAEQSPDLIITVDNGIASLEGVARAQQ HGIATLITDHHLPAATLPAADCIVNPNQPGCDFPSKCIAGVGVMFYVMLA LRAELRERGWFTPNGGDRPEPNFANLLDLVALGTVADVVKLDRNNRILVS QGLKRMRAGQMQPGIAALFKAAARDPKRATAFDLGFLLGPRLNAAGRLAD MRLGVECLLTDDPSRALQIAQELDSLNRERREIEAGMQEQALILLESLDV ANAAPGIALFDAGWHEGVVGILASRIKDKLHRPVFAFARGEGGIVKGSGR SIPGLHLRDALDLVAKRAPGLLVRFGGHAMAAGATLKEEDFERFSQLFAE VAAELLAPADLTRTLETDGNLEGGYISLETARMLENEIWGQGFPAPLFMD DFDVEQQRVLKEKHLKLRLRKGDTRIDAIQFNFSNQPGSRTRVAYRLAIN EYMGVESPQLMVEHLE >Daro_0788 Phage integrase MHIVIEPHLMVKIKYVFQRGDTYYWQRRIPKDLAERYPSSGPLKINLQTS DPRVIASKVSKLNRQHEALWAAMRKDHNLTPQSAREAALSILKQHGLSVR GQPNDELALSLFYDRLDRKREDYAATQPEPEEAYRYGDPSEYLSKSELEA SRLLEGVEHFLMSDALEVYLAEHVKRGKPGFDKLETYTRRAFSKLTELLG DKILKEVSRDDAKAFRDKLLATLKTESVKRNINVIKAVFKSAIVEKELNI PNVWDSLKIAGLGEDSEDREPLSHESLEKMRGLCRAKDDDMRWALSIQGE TGARLAEVVGAGLDDIHIAGEEVPYLDIRPRPWRTLKNPATSTRKVPLVG DALWAAGRLLEVAEKGQKYAFPRYVKDDQCKADSASATLNKWLLASGIDH TTHELRHTMRDRLRNTGATRDIQDAVGGWGKSEIADNYGLGYALKMLQDA LLKTLPVKS >Daro_2472 Excinuclease ABC, C subunit, N-terminal MTKPWFLYMIECVDGSIYTGITVDVDARYAAHCQGTGARYTRSHPPLRLL GHETHPDRSSASKAEYRIKQLSAAEKQRYAATLQAG >Daro_3858 Putative exonuclease, RdgC MWFKNLQLYRLPTPWNIDLAKFDEQLSRGPFVKCPSNQPMSRGWVSPRRD GALVYSLGQQWMIALSVEQRLLPSSVVNEEVKERAELMEAQQGYAPGRKQ LKELRERVTEELMPRAFTRRRTTYVWLDPKNGWFCVDAGSPAKAEEVIEH LRHCLDDFPLTMLHTQVSPQAAMADWLAGGDAPAGFTIDRDCELKAAGEE KAAVRYVRHPLGDEISGEIKAHLASGKMPTKLALTWDDRISFVLGEKMEI KRLAFLDLLKEEAEKSAEHADEQFDADFALMTGELSRFLPQLVEALGGEV VEAK >Daro_3310 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal MSEINTLAGENAIIIAADAVPEITFADLGLAPELLRAVLDEGYTKPTPIQ AQAIPLVISGKDIMGGAQTGTGKTAAFTLPILQRILPFASSSPSPAKHPV RALILAPTRELAMQVFESVKTYSKHTPIRAMCAYGGVDIRPQIAELKKGV EILVATPGRLLDHVENKSVSFNSVQALVLDEADRMLDMGFVPDVTRILNM LPAQRQSLLFSATFSEEIKKLADTMLKSPILIEVARRNQVSDTITHRVHP VSEYGKRGLLTKLLKSGEIRQCIVFCRTKQGCSRLTRELQRAGIKADAIH GDKSQLERIKALEAFKGGETDALIATDVAARGLDVDDLPYVINYELPHTP EDYVHRIGRTGRAGKKGNAISLVSAHEVCYLVDIEKLIKRPIEQVEVAGF EPEPEYEYPPGNKRKRSAAPPAKAPVAHRPERPERSERSERPDRGDRDRR PPRRNPMIAADGFDFSKPYEDNSPRGEVPDSPQAPSKVDPHKPKRVVAAL LGGLGRK >Daro_2218 hypothetical protein MSDVVPSKTVSRSSHNTARRRQQEPASPGRSSQQQPARPQGWAGKTPREI LARYQPGKAPPLKVLEVLIKLFNTLHTALEKTVSHKTRQERAQFLRRFFR DLKQKAGFKTVPDPRNLGQKHIHAMVQVWQQAHLAPATIQTYLSFLRGLA MWMGKHGFVRKPGHYGLSLEEYQRHETAQRDKSWTAQGIDAEAVIADVCK FDLRVGASLRLMSALGLRRKESVQFRPFLHVMPFCETGLPENQQQADRYA WIKGKGGRVRWIPLDDPLQLAALEFAQGVVDGRDAHMGDPRRDLKRNLRR LDYVVEKFGITLRKRGATGHGLRHEVLNDAYEVITGVPSPVRGGGPVSPE LDRAARLAVSQLAGHARARAAGAYIGTIIKPGGRPVGSPEPNGDDDDGAA VPV >Daro_0808 RecR protein MNPSGLESLIEALRCLPGIGPKSAQRMAYHLLQRDRPGAQRLGDAVLHAL QAIRHCQRCNTFTEGDICERCASPRRDPELLCVVETPVDMNMMEQTLTYR GMYYVLMGKISPLDGVGPKELGLDRLMTRALDGVVKEVILATNYTNEGEA TAHYITAMLKPKGVGVTRIARGVPVGGELEYVDSGTLAQALRERKICGD >Daro_1907 DNA polymerase III, epsilon subunit MRPLAFVDLETTGATATHDRITEIGIVEVDADGSVREWQQLVNPGMRIPP FIEQLTGISDEMVADAPPFEAIAGEVMKRLEGRLFIAHNARFDYGFLKNE FKRLGVTFRAAVLCTVKLSRTLFPEHKRHNLDSLIERHELRAEARHRALA DAQLIHQFWQKIHLERSLEAIDAALKAQNTHPSLPPQLDAGILEDLPESP GVYLFYGDNDLPIYIGKAKDIRQRVLSHFSGDHSSAKEMALSQQLRRIDW IETAGEIGALLKESRLVKTLMPTANRQLRKNDDVCTWTLVDEGEGWLRPQ LALAADLDFDIHTACYGLFKSTREANDVLRALVESHHLCDVLTGLDKAKP GKPCFGYQIKRCKGACIGKEPLAKHTMRLMTALTSMKLVSWPFTGPAVIR EGEEAHLINGWRYLGTAKSDEELHALLDGSRPPFDRDAYKLLAKYVGKMV PLR >Daro_2559 conserved hypothetical protein MKLTQLRINNFQSFGPTSTIIDLSAMSFLLGPNGTGKTAVLQALSRLFGF DPALRRVRRSDFHVTPADLAKSDIGPLTLWIEAQFEFPELKKSKGKHATI PGHFAHMQLESVDGVPRVRFRLNAELDDDGDIEETLHYVIQVDTDGEPVK MVAVQKHDRNAIQVHYLPARRDPSDHISYAANSLLGRALRAADWQAERDE IAGLTQNISEALAENVAVGGIGAQLSAHWSTLHKGSYYTKPSVSFERNEI DNLLRHLTVGFTPGHGEQIVDFSRLSDGQQSLLYVSLVLSIQAIGREVLD GKLDAFDVDKLRPAVFTLVAMEEPENSLSPHYLGRVIKALTTFSEHHDAQ AVVATHAPSLLKRVAPENIRYLRLNGDRQTVVKSIIMPDAADEAHKFVRE AVQAFPELYFSRLVVLGEGDSEEIVLPRMLRAKGLADDDTSISVAPLGGR HVNHFWRLLDGLDIPYVTLLDLDLGRYQGGWGRVRYAAKQILALGKPIKG LSKTTIEALPEWNGTDQVMTSESGKQWLSWLETQSIFFSSPLDLDFAMLR RYSAAYKLAAAELAAPETSTLTAVLGKKHHGVEQYNAEHQKHFAAYHQRF KLGSKPAAHLAAMAELSDKDLVDHMPPRIARLIDAVEARLKGLPE >Daro_3325 Radical SAM MSMEDFDLSPSAEIPATPIKGRGAVSNVDHRFSTDTRQNMADGWEASEPA LPQTRLLVDRAKSIISRNDSPDLGFDQSLNPYRGCEHGCIYCYARPTHAY LGLSPGLDFETQIFAKPDAPRLLREALAKPGYVCSTIALGTATDAYQPFE RQEGLTRAVLEVLLETRHPVSVVTKSSLIIRDLDLWTELAQQNLAHIAIS LTTTNGPLARQLEPRASAPHARLEAMAKLSAAGIPVSAFIAPLIPGINDH ELEKLLGAAREHGASHASYTLLRLPHEVAGLFREWLEWHAPQKAARVMSV LYDLRGQRANDPNFGSRMTGLGHFAKLIRQRFELACRRLGLSESPPALDT SQFIRGARIERNGQLDLF >Daro_1887 DNA-3-methyladenine glycosylase I MTMERCPWCEGFDLYREYHDTEWGLPLRDDRALFELLILEGAQAGLSWAT VLKKREHYRQVFDHFDPHKIARYDEQKVAALLADPGIIRNRAKIAATIQN ANAYLSLTAEGQSFSDFLWSFVGGAPVQNARSSLAEVPAKTTQSDALSKA LTRAGFKFVGSTICYAFMQASGMVNDHLVSCPRYEEVQGAFGSEGL >Daro_3512 Histone-like bacterial DNA-binding protein MNKSELVEVAAKEAGITKAAADKALSAIIGAVVATVTKGESVTLVGFGTF KSAKRAARTGKNPKTGATLKIPATTVPKFTAGTAFKASVAAKKSPAKKK >Daro_2108 Transposase, IS4 MAVAINAIGIDDKATKMKRFIQGESRTQSTLLPAVLDDYIADTNPVRVVD VFVDELSLGVLGFASVDPATTGRPAYHPAVLLKLYIYGYLNRIPSSRRLE REAQRNVELMWLTGRLTPDHKTIANFRKDNGPAICKVCRQFVVICRQLKL FTEALVAIDGSKFKAVNNRDRNFTSAKLQRRMADIEASIQRYLTDLETAD RQEPEIAQAKAARLNDKIAALKAQMQQLQVIETRLGQSPDGQLSLTDPDA RSMKTRSTGIVGYNVQTAVEAKHHLIVAHEVTNVGIDRDLLVGMAKRARE AIGGGDLTVIADRGYFKGEQILACEEAGITAIVPKTSTSAAKAEGRFDKA DFIYDPTADEYRCPANQHLIWRFARVEGGLMMNRYWSSACPQCAIKAQCT PSDYRRVSRWEHQAVLDVMERRLDRAPDSMRIRRQTVEHPFGTLKAWMGA THFLTRTLEKVRTEMSLQILAYNLKRVMNLLGVNEFMAALQAA >Daro_0631 NUDIX hydrolase MTGTKQPVSVLVVIHTPALDILVLERAAHPGFWQSVTGSREENEQLIDTA RREVLEETGIEATRESFVDWSMTNTYEIFSEWRHRYAPGITHNTEHVFSL QVPQRIDITTAPDEHRSWRWLPRQQAADLCFSWSNRDAILMLQQRLDSRT >Daro_1155 Endonuclease III/Nth MKKANIEQFYSRLRDANPAPTTELHYATPFQLLIAVILSAQATDVGVNKA TLRLFPVAPTPEAMLALGEEGLTEYIKTIGLFRTKAKNVMATCRMLVEQH GGEVPDDREALEALPGVGRKTANVVLNTAFGHPTIAVDTHIFRLGNRTGL APGKTVQEVEQKLLRVTPDEFKKDAHHWLILHGRYICKARKPECSRCVVL DLCSFRGKTV >Daro_2285 Integrase, catalytic region MIDKAHDLPVVRQVQLLELSRSSVYYQPQPIPEDDLRLMRRIDELHLEYP FAGARMLRDMLKLEGHGIGRKHVGTLMKKLDIQAIYRKANTSRRNQAHRI YPYLLRDLAIDRPNQVWAMDTTYIPMRRGFVYLSAVLDWATRRVLAWRLS NSLTSDPCVDALEEAIMKYGRPEIMNTDQGSQFTSSAFIGLLQESTIQVS MDGKGCWRDNVFVERLWKSVKYEEIYLHGYDTVSEVRQALARYFDFYNRR RPHSTLDGQTPDTAYFNQPLLAAAA >Daro_1820 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal MTFSSLGLAAPLLQALETLGYETPTPIQAQAIPAVLAGRDLMAAAQTGTG KTAGFALPILQRLSESEDKVASNSIRVLVLVPTRELAEQVHASFRQYGEH LAVSTYAAYGGVSINPQMMRLRRGVDVLVATPGRLIDLFTQNAIKFKQVQ TLVLDEADRMLDLGFAHELDTLFAALPRKRQTLLFSATFSDEIRSLAKGR LRDPLSIEVAPRNSTVKAIKQWVVPVDKKRKTELFLFMRKDRKWGQVLVF VKTRRGVDELVATLLAKKIKADAIHGDKPQPARLRALESFKAGEVQILVA TDVAARGLDIDDLPQVVNYDLPIVAEDYIHRIGRTGRAGATGQAISLVCA DEAPLLAAIETLIKQTLSREEEPGFEPDHRVPLTGASAIAAKKPKKPKVA GGRGGKGVPGNWVGFDEGGGKRSGARSTGGPRSAAKGSPKAGKARGR >Daro_3211 Exonuclease VII, large subunit MPAPTSPVSNTVLSVASLNRLVRDCLESAFPLTWVGGEISNLTYASSGHV YFSLKDSSAQVRCVIWRSRAQLLGWRLENGQKIEARALVSFYEPRGEFQL NIEAVRRAGQGDLFERFLRLKAQLEAEGLFAPESKRPIAPFPRHIAIVSS LQAAALRDVLTTLHRRAPHLRITIFPSLVQGEGASQKIAEALGQASASDC DTIILCRGGGSIEDLWAFNEECVARAIRASAIPVIAGVGHETDFTIADFA ADLRAPTPTAAAELVSPDRDSLLTRLSQLEGQLQRRVERGLADQQQRIDW LGSRLVHPAERIRLRQQENEALSQRLQRALLRQMDHARLQLTTLGQRQAT ARPRPELLARTLEHLRHRLGKQTQWALSQHSGKLNSLSSSLKQLDPHAVL TRGYALAIGPDGRAIRNASALTPGDALKLSFAQGTATATVNQVVAMPEAD >Daro_2425 Integrase, catalytic region MVMRESTTISKRRACLLAGLSRTVLHYESKVQPENEQLQARLVEVASERR RFGYRRLHALVRREGVQVNHKRIYRLYSSAGLSVRHRKKRHGVAVERQAL ELPSSPKQVWSMDFVSDALANGRRIKVLTIVDDFSKEAIDLAVDFGISGH YVTRVLDQAARFRGYPKAVRTDQGPEFTGKALDQWAYQHGVQLKLIQAGK PTQNAFIESFNGRFRDECLNDHWFTSLPQARILIAAWRRDYNQHRPHSSL DYLTPAEFAAKHRSCDPDDPVGKGCL >Daro_2498 Phage integrase MNIELIGRVWYASLLVPKDAREALGKVRFKQSLGTANRREAIHLAAPIVS HWKAQIKQARGSTNAVANEALRWKQALMQAPDEDTKETWENVLSDKVESI EQAKGYQAAKDFSDLATGIATPSNQYFETWKAQITSVAKTKDQMVKDVGL LIAEFSTLQAVNKAAVRHWIDKLLGDGKGGASIRRILSFCRHYWRYIKRY DAVDKESAPFDGVFEAAPKKKRRTTNLPYSPDDVVQLWKAASERPLGTAK NAPKDVQLAELIMLGAYTGARIEELCSIKITKVTGHSFKVEDAKTDSGWR EVPIHSAIAPLVKRLKESSKDGYLISGLTFNKYEDRSNAIGKRFGRLKTA QGFTSAHTFHSFRSTVATLLENAGVLEGVAADIIGHEKPTMTYGLYSGGA DMATKKAALEKISYPFPKDAQE >Daro_2347 MutS 1 protein MVKDKAPDLSKHTPMMRQYLALKANHPNTLLFYRMGDFYELFHEDAEKAA RLLDITLTTRGQSAGVPIKMCGIPFHSLEPYLARLVKLGESAVICEQIGD PATSKGPVERAVARIVTPGTLTDAALIDDKQDLWLLAVTTHRNTAGIARL NLASGEFILIEVPTEQIPATLERIRPAEILYPESWTPNFGVDVARTRQPD WYFEFDSARRLLCDQFEVASLAGFGAEGLKPAIAAAGALLQYAQATQSGK LPHLRGLTVEIEGAYLGLDLATRRNLELTETLRGQPSPTLFSLLDNCVTS MGSRLLRHTLHHPLRARDIPAARHGAVEALLEDYGRLGNEVRKALRGIAD IERIAGRVALRNARPRDLASLRESVARLEGLRAPLSDSPAPLIAQLFTEL ETPYPALELLVRAIAAEPGAQVRDGGVIAPGYDPDLDELRSLNDNCGAFL VDMEARERERSGIASLKVEYNKVHGFYIEVTHANVDKIPDDYRRRQTLKN AERYITPELKAFEDKALSAQERSLAREKLLYEAILDALLPVVPTLQTIAR AIAQLDLLAGFAESALKRNWCKPEFAAETQLSITGGRHPVVEGELTNQAE TFIANDCLLAENRRLLLITGPNMGGKSTYMRQVALIALLAHIGCYVPADR CVLGPLDRIFTRIGASDDLASGRSTFMVEMTEAAAILHHATNQSLVLMDE IGRGTSTFDGMALAFAILRHLIEKNQSLTLFATHYFELTRLSHEYSELAN VHLGAVEHNDRIVFMHAVEEGPANQSYGIQVAALAGIPTAVVRAARKQLR EFEQRAAVDPLQPDLFAQGAPEPAEPEPHPVVEQLAAIDPDSLTPREALD ALYALKGLLR >Daro_2695 Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal MMFNLRPYQQSAEHKARLALARGLKRIALYLPTGGGKTLTATSIIIKAVA KGRKVVFLANRKQLVNQTSAVLYRYGIPHGILQAENTARIHEQVLVASID TVHVRGLPDDVGLLIIDEAHGVAGSEKYRKLLITYNNVPAVGLTATPFAV GMGKHYDELGGSLFQELVVGATIKELIDAEYLVDVDIYAPSEPDMKGVKS TKGLDGLLDYNQSELEDAADKPELIGDIVGHWFKLARGKQTVCFATSIPH SKHIVEQFQAAGVAAEHIDYHADDDERAAILGRFAHGETMVLSNVALLAE GWDCPATEVMILARPTRSLIRFIQMVGRILRPADGKIKALLLDHSGSTAR LGHPCDDLPLELDDGKPKASSTEKKERAESLPKACPFCKFMRPAGVHACP ACGKAPERQSDVVVGDGDLVKMDRKKPIKRETGQWIYSQLLGYAKSKGYK SGWAFHKYFEFTGKEARGLRQVIAVPTAEILGWIKSRQIAAAKAKEKQGG HHAT >Daro_1288 propable PolB MKPVLIFDIETIPDVAGLRRLNDLPGELSDDEVAELAFQQRRAKTGNDFL QLHLQRVVTISCVLRTSEGLKVWSLSEPDLNEGAIIQRFFDGIEKFTPQI VSWNGGGFDLPVLHYRGMLHGVAAPRYWDMGDGDYADSRDFKWNNYISRY HTRHLDLMDLLALYNGRANAPLDDLAKLFGFPGKLGMDGGKVWEAWQAGK IAEIRDYCETDVINTYLVYNRFRRLRGELTAEEEVAEGEFVKAQLAKIGT PQWQEFLAAWQ >Daro_0019 SMF protein MSHNDSLAAWLRLTLIPGIGGETQRKLLAAFGLPEAIFSAGRLEARGVIG NRADLLFDFDPTEAVAHSLEWARQPGQHIISLADEAYPKALLEIADPPSL LYVRGNLALLQKRGLAMVGSRNATPQGVQTAENFAKTLAAKGLTIISGLA LGIDAAAHRGALAAKGETIAVIGTGPDRIYPARNKELALAIVESGAIVSE FPLGTPAIASNFPRRNRIISGLSCGVLVVEAAPESGSLITARLAAEQGRE VFAIPGSIHSPVARGCHKLIKQGAKLVETATDILEELGSFNAAPAADIPS DKADEGPILTALGHDPCSLDDLVERTTMSADQLLPELLTLELCGLIATLP GNRYQRLN >Daro_2250 RNA-directed DNA polymerase (Reverse transcriptase) MALHAKAKSESGYRFYALYDKIYRTDILAHAYAQCRSNKGAPGVDRQDFE DVEAYGVRRWLEELALALKEESYRPDPIRRVFIPKANGKLRPLGISTLHD RVCMTAAMLVLEPIFEADLPDEQYAYRPGRNAQQAAEEVKNRLYLGQTDV VDADLSDYFGSIPHSELMKSLARRIVDRRVLHLIKMWLECAVEETDQRGR KKRTTEAKDQGRGIPQGSPISPLLSNLYMRRFVLAWKKLGLERSLGSRIV TYADDLVILCKCGKAEEALQWMRTIMGKLKLTVNEEKTRICQVPAGTFDF LGYSFGRRYVPRTGKPQIALWPSKKSIRRMVEKIHDMTERQTGWQETTEL VGKLNRTLRGWANYFSVGNVSRAYRALDSYTATRLRRWLRYKYKLRHCKG GSYPLSHLYGYFGLVRLGARGRSEAWVKA >Daro_1941 conserved hypothetical protein MLWLALHFPLLPIEALPLRQSPSAVVSRGRVLVGDLAARLAGVCAGQKLS TALGLQPGLMVFERDEVREIKALESLACWAGRFTPTISVVSPDVLLLEIG SCLRLFGGAPAIIEAVLAGCAEQSYSTNWAAAPTPLGASWLARNACAGIH IEISAMQAALADLPCAIDEWPGEVIDRLESFGLKRLGDLRQLPGAGLRRR IGNQPMDDLLRAWGDLPDPQKPFAFPESFAIDLELPARVEHAEALAFAGQ RLFAALAGWLHGRQLLLRCCTLHLAHDDGEKTPLALRFSEPAADEGRFMR LLREHLARLQLKAPVEALCLQADELLDKPGASAHLFEQAATGEGALACLE RLRARLGEGAVQALSLMADHRPECATFRHEVVTCSPHDMRASTAVGQHRP LWLLPNPQALVECAGRPQWHGQLKLLSRAERLESGWWDEGEAGATGDVRR DYFVARNPLGQWAWVFRDAQGWFLHGLFA >Daro_0546 UvrD/REP helicase MSDLLANLNSPQLQAVTLPPVHALILAGAGSGKTRVLTTRIAWLISTGQV GPHGVLAVTFTNKAAKEMTARLSSLVPINVRGMWIGTFHGLCNRLLRAHF REAGLPQTFQILDSADQLAMVKRLLKNLNIDDEKYPPRELCHFINAHKEQ GVRAAQAEAYDNYTQKRVEIYAEYENQCNREGVCDFAELLLRCYELLQRN EPLRAHYQQRFRQILVDEFQDTNVLQYAWLKLLAGGGAHIFAVGDDDQSI YRFRGAEVGNMREFERDYAGANVIRLEQNYRSHGNILAAANAIIKNNRER LGKNLWTDAGDGEPIRAFEAYSDLDEARFIVEEIRELVRDGNSPTQIAIL YRSNAQSRVLEHELFTKGVPYKVYGGLRFFERQEIKHALAYLRLLGNQDD DTAFLRVVNFPTRGIGARSLENLQATAHQINSSLYNAAASLTGKAGQTVG AFVRLIETLRQETANLPLPEIIEHVVEKSGLAQHYRVEKEGQERLENLDE LINAAATFVDDEGAIGEGGALASFLAHASLEAGEHQAGEGQEAVQLMSVH AAKGLEFDVVFISGLEQGLFPHENSVNEGKDGLEEERRLMYVAVTRARQR LYVSCAQTRMLHGQTRYCVPSSFLDEIPEGLMRKLNKKAESATAVPAFGS FGGGYAEPAAGGLRVGQTVEHAKFGVGVIVSTEGRGSDARVQVNFGGAGM KWLALEYAKLTPV >Daro_1074 NUDIX hydrolase MTQTSYWILRSEHRLLTITGHGAEAIFPSALPADFKHPANALPVGQLNGC PCYAADVEHLPAIPGSEPTPLRTIFQLAGAETFALAGRATQLLDWQNNHR FCGKCGTPTAMKTGEQAMQCPACGLLAYPRISPAVMVLVRDGDKLLLGRS PHFKPGVFSALAGFVEPGETLEECAAREVREEVGIEIANLRYFHSQPWPF PNSLMVAFFADYAGGTITPDPNEIEAADWFPLDALPLLPEPISISRRLID TARKQTDNANN >Daro_0033 Primosomal protein n MSAAKSMQVLRVALDLPLHRLFDYVVESASTEDIGLRVRVPFGRGEKLGV IVEVLAESDWPLEQLKPAIEVLRDLPPLPGDFFRLCRFASAYYQAALGEV IMQALPIGLKRLDPPTRRNARASRSSVAIAPPALTEEQTIAVAAVDPAAG FSAHLLHGVTGSGKTEVYLRLIERAQADGKQVLLLVPEINLTPQLEGRVR SRFPEAGVVSLHSELAEAARERNWRAAFSGEASIVLGTRLSIFTPMPRLG LIVVDEEHDASFKQQDGMRYSARDVAVFRAHQLGIPVLLGSATPSLETWA NAQSKRYNLITLLERANPEASLPAIHILDTRKMVLQEGVGEPLIAAIKER LARGEQSLVFLNRRGYSPVLACPACGWVSRCTRCAANMVLHLADKRLRCH HCGCEHRIPKACPTCGNQDIHPFGRGTQRLEGWLQEAFPEARVLRVDRDS VKSRKQWEVMLDRIHGGEADILVGTQMLAKGHDFPKLTLVGVLGADSALF AADWRAPERLFAQLMQVAGRAGRAELKGEVQIQTQYPDHPLFASLVKHDY PGFAALQLKEREQAGFPPYAFQAVLRAEAPEMADAIAFLKTAAAMPLIGE HENIMIYDPVPMKLARLANLERGQLLAESYSRPALQVFLPLWREAIEGIK APSKLRWHIEVDPLEF >Daro_1118 Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal MSTPVESFADLGLSETLLQTLTQIGYETPSPIQAQCIPVLLEGHDLIGMA QTGTGKTAAFALPLMEQIDVKLTKPQALILTPTRELAIQVAEALQTYAKN LPGFHVLPIYGGQSYTIQLKQLSRGAHVIVGTPGRVMDHLERKTLNLDHL KTMVLDEADEMLRMGFIDDVEWILERTPAQHQTALFSATMPEQIRRVAQK YLVEPREIKIKSATATVAAIRQVYWQVSGMHKLDALTRILEVEEDFDAAI IFVRTKTATVELADKLSARGYAAAALNGDLNQQMRERVIEQLKSGALDIV IATDVAARGIDVPRVSHVVNYDIPYDTEAYVHRIGRTGRAGRTGNAILFV APREIRMLRTIERATRSPIAPLTLPSRADVTNKRVADFKSKVVEVLNAEG LDFFSNIVSQIAEEQNVGAEEVAAALAMMAQEGKPLQIAGEDPRPAPAPR PGSFGESDRKPRFEDRGDRPRFEDRGERPRREDRPARQAPAGDMVRYRID VGRDHGVEVRDIVGAIANEAGIESRFIGRIGLYEDSSTVELPAGMPAEAS NALKRTRIRGVPINLRPDEGRPGAGGAGGGERKFGGGDRKPEGDRGGFKK KKFGDR >Daro_1592 DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit MRQIVLDTETTGLDPRSGHRIIEVACIEMVNRRFTGHHLHKYINPEREID EGAQAVHGITLEFLADKPKFADIADEFLEFINGAELIIHNAPFDIGFLNA ELDRLGRVPVGTICNGVIDTLRMAKELHPGKRNSLDALCERYEIDNSSRT LHGALLDTELLADVFLAMTRGQNSLMIEPDAEPRPNIGADGQVRERKPLS VRRAAPEEIAEHETVLAAIDKESKGACIWLPKPETEAA >Daro_2221 Helicase, C-terminal MARPTAPSLWLPGFDPAAPTLPRPAEQVCLSVSCGPGEPVEVIHVENLSD VEQEQSVVSVRANWRVVATAPEAAPRILWPQLTRADQEHLTGPTAKFEAN LAAITLLREIEAEVRPASTDDRQVLRRYTGWGGLPASFNLEATDSAWGER ARRLQAMLSAEDFESARASVNNSHYTEVPVIEAIWQAVERFGFTGGRILE PAAGIGHFIGAMPRNLAERSSVTAIEIDRVSGRILNALYAPGGVDVRISP FEKTPLPDHWFDLVIGNVPFGKYKVADVSNRAYSRFSIHNYFFGRALDLV RPGGLVCFITSSHTMDGQYDAVREYIASQAHLLGAIRLPKGTFAGIASTE VQTDILFLRKRQRAETVEAKWLKLGTVPDSLRHPQCYERYLPINAWYAEH PQFCIGRIRRESNGYEEVPVAVFEGDLEAALAERIALLPAGAYRPVAHKA APLRVVVPADAGARPGSYHLHQGRVHRVEGSEMVDVHDQLNATQRARVTG LCAIRDHARALLDAQLADAGDGRLGHLRAMLNGTYERFVSRYGCLSTRAN ALAFRRDPDYPLLLSLEHYDEEADTARKAALFSRRTLIRVVEPSTAAEPA EALAASIQWRGRVDPAYMAEILGAPEAAVLEALAGAGQVFLDPADGEWKT TDDYLSGNVKAKIKQAVLSGSTYQRNIDALEQVQPEDLPPAAIEPRLGAV WIPALDVEAFIQQVLELKDCQVGYSAEAGAWSVKYGEWEARQNVKVTQEF GTSRMNAIELVQCALNVQVPTVRDRDPLTDKYFVNPDETLAAREKLGLIK ERFAGWAFEDTERREKLCRIYNDLFNATRPRRFDGSHLKLPGFSRCFVLH PHQLDSVWRIVQSGNTGLFHVVGAGKTAVCVIASMELRRLGFVNKPCHVV PNHMLAQYTAEFVRLYPNASVLMAGKEDLAGDRRRELVSRIATGDWDAVV ITHSSFERIRMSPRFSERFIKEIIHEIEMAVRAEKSNDRSNRIVKQLEAM KKNWTVRLEKLSADQKKDDLLSWELLGIDALFVDEAHLHKNLYRFTKMTR VAGLPLTSSERAFDLFLKTRYTMQLHGHAQRGVVFATATPVANTMAEIHT MMRYLQPNRLAELGLQQFDAWAATFGESVTALEIAPDGSGYRMHTRFARF INVPELMAVFGEVADIRTAEMLDLPVPKLRGGKPRIVACPASPSLKAFVQ TLVQRAEAVRNGDVKPNEDNMLAITTDGRKAALDFRLVAPLARFDEHGKV AACVREVHTIWQRTADFRGAQLVFCDLSSPKGGKSFSVYDDLRERLIGAG IPEKEIAFVHAAETDVQKATLFKAVREGRVRVLLGSTAKMGVGTNVQTRL TALHHLDAPWRPCDVEQREGRILRQGNECEEVEIFRYVTEGSFDSYMWQT LETKARFIAQVMKGDQGIRSLEDVELAALSYAEVKALASGNPLVIEKAGV DAEVAKLSTLFSVWRNQRYANESEVGRLPMMIEALEKKVALYAQDAARIE PQTMQGIAVELAGRRIVGPDGVGEALRGLVRTAKEEVRTASRMIERIVGR FGGFDLGILAARGDETPSLYLAGHCLYNAEPYQTGPALVAALLAALDSVG KHHADAGIQLETRRKRLEDLRLELARSFEHEGRLTNLLVRQRELLKQLDL DKDEAGSAKVDADEARQAA >Daro_3841 TatD-related deoxyribonuclease MLIDTHCHLDAAEFDADRDRVHAAALAAGVARIVVPAVAVDGFEKTKTAV ERYPGCVAAYGIHPMVVMSARESDLGILRDWLARERPVAVGEIGLDLFVS DIDPARQEFFFVEQLKLAREFDLPVLLHVRRAVDPILKQLRRIGVRGGIA HAFNGSRQQADELIKLGFALGFGGAMTFSGSTRIRDLAKNLPLESIVLET DAPDIPPAWLNGGRNSPAELARIADVFADLRGIGRAEVMLATAANARRVL PGL >Daro_0503 Protein of unknown function UPF0102 MQVKANDTTTARGREAEDRAARHLERGGLRVVERNFRIRGGEIDLICRDG KGLVFVEVRQRSRSDFGGAGASITAGKRRRIVLAAQHYLLGKPDCDCRFD CVLIDGEQLEWIKHAFSADD >Daro_3180 conserved hypothetical protein MLKSRPLFHSDLPMRQLILDLLPESPPTLDNFVAGGNAETLALLTEWLAG TRTDTSFCLWGEAGSGRSHLLQASGFTYVDAALDPALKTAPAAEQLAVDH VEALDETGQIALFNHFNRLKMASGMLLTAADQPPAHLALREDLRTRLGSG LICRLQPLSDAEKAAALGAQAKERALKLTPELIDYLMRHAPRDMRTLSTI IVALDEYTLEQKRPVTLPLLRELLNMEASS >Daro_2231 DNA repair protein RadC MNLSALSRADLVRELLSPLVCASSINPLHVSDAVAQMGMLGTTDTVLAHR LGIARELLLRDLRAQMRSSPLMISPQVLRDWLRLYCAGLEHEVFLALYLD AQHRLIEVEELFRGTLTQTSVYPRELVKGALARNAAALAVAHNHPSGEAE PSRADELLTQSLKQALSLVDVRVIDHFVVAGDTVVSFAERGLV >Daro_3892 Holliday junction resolvase YqgF MGTVLAFDFGEKRIGVATGETMLCSAHPLTTIHAESNEDRFAAIGKLVAE WQPEQLVVGLPTHADGTPHEMTRLATKFGERLARRFNLPVSFADERLTSL DAEARLRETGRNSKSAKPLLDAVAAQLILQTWFESPHHVIPTQPSA >Daro_3449 N6 adenine-specific DNA methyltransferase, N12 class MNRNVAQLGQVFTPPNVVAFMLDLCRNKGRSLEPSAGDGAFFSTLRQRGA DCVGIEIDQRVAPEGSQVRDFFDYPLSEQFDTIVGNPPYVRLQDVAAGTR KQLNSELFDGRSNLFLFFIEKCIRHLKPGGELVFIVPREFIKLTAAKKLN AWLYEQGSITHFYETGDVRVFGDHTPNCAIFRFEKGRMDRRMEDGRTFTE VDGQLMFLRDDYSVHFADVFDVKVGAVSGADKLFAHPKGNMEFVYSKTVD TGETRRMLYGIKHPHLDKHKPELLARRVRKFDESNWWQWGRAFPINEHPR IYVNGRTRKPAPFFLHDCNAFDGSILALFPKNRKISRRDLIECTMMLNNE VDWQQLGFICDGRFIFTQRSLQNCLLPAKFSRYLPKDSR >Daro_3888 Competence protein ComEA helix-hairpin-helix region MQRDIFNPKEQPMKRVLTLILVLFSSISLAFAAVNLNTATVDELDGVKGI GPSKAKAIVDYRTKNGSFKSVDDLKGVKGFGEKSIAKLRSELTVGDGAAK AAVKK >Daro_0932 DNA repair protein RecN MLRQLTIKDFVIVDRLELSFSTGFGALTGETGAGKSILIDALALTLGERA DAGVVRSGCEKAEVAATFEVSTLPEVRSWLAENDLEGDDELLLRRVVDAG GRSRAYINGSPATVQQLREVGEWLVDIHGQHAHQSLLRSEAQRVLLDTHA GLNGLGGEVAAAWKNWRELEQALRSASEGADALLREREQLQWQIGELDGL AFGDDEWATLDVEHRRLGHAASLIEGAQYALAVLSEDEGACERQIDGVAT RLASLAEYDPALAEVAGLLGSVQAELSDAVSTLRRYTDRVDLDPARLAQV ERRMDAVMSHSRKYRVQPAELPGLLAGWRQRLAALNESADLAALETKVAA AKAAYRAVAEKLSGGRKKAAAEMGLAVSEIMHQLALSSGRFEVALVPVTD GAVYGLEQVEFRIGGLAGNEAKSLAKVASGGELSRISLAIQVLTSRSASV PTLIFDEVDVGIGGGVAEIVGRLLHELGCERQVLCVTHLPQVAAEANWQW QVSKSTRDGVTLSAIQPLDEDGRIQEIARMLGGVEITDITLKHARELLGT RAKKAKV >Daro_1305 Integrase, catalytic region MIDKAHDLPVVRQVQLLELSRSSVYYQPQPIPEDDLRLMRRIDELHLEYP FAGARMLRDMLKLEGHGIGRKHVGTLMKKLDIQAIYRKANTSRRNQAHRI YPYLLRDLAIDRPNQVWAMDTTYIPMRRGFVYLSAVLDWATRRVLAWRLS NSLTSDPCVDALEEAIMKYGRPEIMNTDQGSQFTSSAFIGLLQESTIQVS MDGKGCWRDNVFVERLWKSVKYEEIYLHGYDTVSEVRQALARYFDFYNRR RPHSTLDGQTPDTAYFNQPLLAAAA >Daro_3427 Integron integrase MSDIESSAPQSPKLLDQVRDKLRLKHYSIRTETQYVQWIRRFILFHDKRH PREMGAGEVEAFLTHLAVEGRVAASTQNQALSALLFLYRDVLGIQLPWLD QVVRAKQPQRLPVVLTRQEIAALLDRMSGLHGLMARLLYGTGMRLMECVR LRVKDVDFERAEIVVRDGKGAKDRVTMLPRTLIEPLQDHLRWRRTCYEDD LARGKASVYLPNALDRKYPNAETDWAWQYIFPAAGYSIDPRSGVERRHHL DEKALQRAVKKALQASGIAKLATPHTFRHSFATHLLQSGYDIRTVQELLG HADVTTTMIYTHVLNKGGRGVVSPLDV >Daro_0194 Tyrosine recombinase XerC MLAVDTWLAELSDQRRLSAHTVSNYRRDLQKLLAAAGDIPLASLQVHHLR RFVAQLHGQGLAGRSLARALSAWRGFFHWLGERGMVKANPCDGIRPPKSP RMLPKALSVDETSRLLMPVDDDDPVQAARDLAMFELFYSSGLRLAELVAL DCEALDDIAHESEVRVLGKRNKLRLVPVGSKAREALAAWAAVRNELAKPE EKALFVGQRGGRISPRMVEARLARRAVLLGLPTHVHPHMLRHSFASHVLQ SSGDLRAVQEMLGHASIASTQVYTHLDFQHLAKVYDAAHPRAKSK >Daro_0001 chromosomal replication initiator protein, DnaA MSGFWESCLQRFEQELPAQQFNTWIKPLRLEGESTALEDGLRLIAPNGFI LKWVRDRYLTRIEDYSRTFFEGPVTIALVIGSGKATAARIQATTTDSGQN APANPATTSEKRTAASEKARGKGSNYEKSRLFPSFTFDNLVVGKANDLAR AAAVQVANNPGGAYNPLFIYGGAGLGKTHLIHAIGNTIATENPEKIVRYV HAEDYYSDVVRAYQQKSFDSFKRTYRSLDVLLLDDVQFFNGKNRSQEEFF FLFNALIEARKQIIITCDTYPKDINGLDDRLVTRFDWGLTVQIEPPELEM RVAILKKKAEAEGIQLDDEVAFFIAKHLRSNVRELEGALKKVLAYSSFHG RVIALDLAKEALKDVIGSVRNVGMDNIQKTVADYYKIKVAELFSKKRTRA IARPRQVAMWLCREVTSHSFPEIGDAFGGRDHTTVIHAVKTIDSLRIKEN ELNHDLHVLLQVLKG >Daro_1108 conserved hypothetical protein MAALIPAIGTCVSRMTGGERRLAYRLEQKLEDDWLLWYDVPLGPRNVHPD FVVFNPRRGVLVLEVKDWKLDTIRDIDRQSASILTSTGLKRVSNPLEQAR QYAHEVSNLLQRDPQLTINSGRMQGTLLFPWSYGVVLANISRKQFDSTNL ADVIEPHRVICQDEMTESVDAEAFQERLWGMLPFARSVPLSLPQIDRIRW HLFPEIRIAAPTQNGLFDDQEPEIPDIVHVMDLQQEQLARSLGEGHRVIH GVAGSGKTLILGYRAEHLAKVCARPILVLCYNRTLAKRLTRTMASKGLAD KVHVHTFHQWCRAQLVAYNADLPESGKGSDIYAAELVDRLIRAVDANIIP AGQYDAVLIDEGHDFQPEWLKLVAQMVNPSTNSLLVLYDDAQSIYGNGRH NKFSFKSLGIQAQGRTTILKINYRNTQEVLELASGIASDLLKPSASDEDG VPLVAPISAGRHGPKPLLIKLPSIQEEADYIAKHLKEAHKTGTPWSDMAV IYRDYGIGKPVLATLRKAGIPVTYQDDITFAEKEDTVKFLTMHSCKGLEF PLVAIPGAGRAVDEGRKDEEARLLYVAMTRATRELVVVGGETS >Daro_0843 HhH-GPD MPPDYWIQAISDLSRRDAAMAELVERYAGLSLVSRGDAFMTLARSIIGQQ ISVKAADSVWRRFSEQVGSVTPTQILAVGERGLAGCGLSKRKTEYLCDLA SHFSSGQLDPTAWSGLDDEAIITELVAVRGIGRWTAEMFLIFNLMRPDVF PLDDIGLQRAVNEHYFKGEKQPRKILAEFGERWRPWRSVATWYLWRSLDP VPVEY >Daro_2563 Histone-like bacterial DNA-binding protein MTRSELIALLAERFPQLVQKDAEMAVTEILGAIHAALVHGYRVEIRGFGV FDLNHRTPRQARNPKTGEPVAVPAKWVPAFKAGKELRERVMASVSPQRLL IDQPAYGAIADTRQRESEMLFKDGIT >Daro_1324 Phage integrase MASIQVRKETGTLIIDFYFQGQRCREQTMLADNPANRKRLSKVLAKIEEQ IFTGAFNYREFFPGGKNAGKFDQPAPMVQMTVIAHAVGEQGGGKTTPMFK DFAETWFAEKSVEWRTSHKKTVREDIDKRLIPRFGERMVGNITKADILAF RADLAKAPARNKTNLLSNPRINKILNPLRQILCEAADRFDFRTPFQNIKQ LRVKRTDVEPFSLDEVKRIIESVRLDFKQYFIVRFLSGMRTGEVHGLKWK YVDFERRLILVRETVVDGEETYTKTDSSQREIQMSQQVYDALKEQEKATR HISEFVFCNREGLPLDYKNVNNRVWKPLLRLLGLKVRRPYQCRHTAATLW LGAGENPEWIARQLGHTTTEMLFRVYSRYVPNLTRRDGSAFERLLAANLG HNPITTPSQGA >Daro_1983 Phage SPO1 DNA polymerase-related protein MSLSREQMLAEMGISPIWVLRDVAPPASAIESSPQMEAEAVTPPQVAEVP SAPIPAQTPPPRSTAAAVDTLDWPALARQVAECRACSLCEQRKQAVLGVG DTNPEWLFIGEGPGAEEDVKGEPFVGQAGKLLDNMLASLDIARGNRVYIA NAVKCRPPGNRTPDAAEMAACWPYLERQIALLKPKVIVLLGKAAVHAVLH DDKSLASLRGKRFELAGIPVVVTYHPAYLLRNLPDKAKAWEDLLFARRTL REQMAPELPF >Daro_3083 DNA polymerase III chi subunit, HolC MTEVFFYHGASDKIAAACALLSGAYAKKKPMLVYTLEPEVASGIDRMLWT NAALSFVPHCRADSPLAAETPILIADTLETIPQDERLMNLSQEIPPGFSR FHSLIEVVGQDESDRLAARDRVKFYKDRGYEVRYFDLSNR >Daro_2196 DNA polymerase III delta prime subunit MNVIELHSKVWLGLQARRERLPHSLLLVGQKGLGKFELARRFAASLLCES PQSNGLACGKCLACNWFEQGNHPDFRLLQPDALGEDVEVEDGKKKPSQQI TIDQVRALDEFFNVGTHRGGLRIVIVNPTEAMNRSTANSLLKTLEEPSAD TLFLLVSSEPMRLLPTIRSRCQVVPVPVPSAKLAGKILADEGLQQSERWL ALAGGSPVLALDLAASGQSAWIELLVARLGNGRNADPLAMAAELEKAVKD SKGKLLLKHVVEGVQKWLVDLTLAKNGMPVRYFLPQQPTISGLADMIPAA RLIHSYRAVISRRQEAEQPLNARLFLEGLFLDYRALFAN >Daro_1942 DNA polymerase III, alpha subunit MSLPEYAELHCLSNFSFLRGASHPEELAARALAQGYAALALTDECSLAGV VRAHLAAKKHGLKFIVGSEMMTVDGLKLVFLACNRHGYGNLSALITLARR RAEKGGYTLHRNDLESISPSGALPDCLVLWVPGNNPSSADGEWLVSRFPG RSWIAVELHAGPEDAERLAGLQSLGEVCGLPLVATGDVHMHIKARRPVQD VLTALRLKSTVFEAGYALFPNGERHLRSRLRLSRLYPPELLAETLNIAAR CEFLLDELRYEYPEEIIPSGETPASWLRSETERGLQRRYPAGVPGSVRER IEHELGLIAEMAYEAYFLTVYDIVCYARSQDILCQGRGSAANSAVCYALG VTEVDPARSALLFERFVSKERGEPPDIDVDFEHERREDVIQYIYTKYGRE RAALAAALITYRTKGALRDAGRALGFGIAQINALTASLAWWDKREQLPER FAELGLDPHAPRVEKWLAIAEALRGFPRHLTQHVGGFVISRGPLSRLVPV ENAAMSARSVIQWDKDDLDAMGLMKVDILALGMLSAIRRMLQIVGETTGR PMKMQDIPAEDPATYEMLCHADSMGVFQVESRAQMAMLPRLRPQNFYDLV VEVALVRPGPIQGDMVHPYLKRRQGRERIEEISPAVDAVLERTYGVPIFQ EQVMQLAVVAANFTPGEADQLRRAMAAWKRKGGLEPFEQKLLAGMAANDL PESFARRIIAQIQGFGEYGFPESHAASFALLVYASAWLKRHHPAAFLCGL LNSQPMGFYSPSMLIQDARRHGVRVLPPDVMTSDWDSRLDERGAVRLGLR EISGFSVAAAKRITAVCRENQPFLNVADLAARAGLQRRDLDLLAAGDALQ GLAGHRRQAAWAATVAVVQGDLFDGTPVVEAEIELPAPSDGENLVADYRS LGLTLRSHPLSLLRQYLAERRFVTAADLKMAGHHTLIRSVGIVVGRQRPG TATGIVFVTLEDETGLSNVVVHPQLVEKQRRELLGSTLLGVYGQLQVEGE VVHLVAKRLVDLSAWLGRLETVSRDFH >Daro_3434 Transposase IS116/IS110/IS902 MNIVTVGIDLAKNVFALHGVDQYGKAIFIKPKVARGQLLEMVAQLPPCLI GMEACSGAHHWAREFSRVGHTVKLMAPKFVVPYRMSGKRGKNDAADAAAI CEAVTRPNMRFVPVKDVDQQAILCLHRTRQGFVEERTALYNRLRGLISEF GIVLPQKVERLRREIGAHLEALPGWANRCVGDLLAHADRLNEHIDEYDKA IALAAKQDQRSRQLMQLPGIGPTTASALVASLGGGHDFKNGRQLAAWVGL VPGQYSSGGKARLGRITKAGDAYLRSLLVMGGRSVLAGLGDKQDRFSRWA RNLVERRGYWKAAVAIAAKNLRLAWAVMHYGEEFRRIEDLA >Daro_2573 conserved hypothetical protein MQNREYEARIEAVKQRAHGRWTEILASLGVDERILKRRNLPCPLCGGTDR FQYTDKFGEGNYHCRSCGPGGGFKLLQALQGIDFNTALRDVECCLGMMPV MAPVRANEPSAERMQKLAQRIWNEAKPVTAGDEVDRYLTSRGVALPVYPK VLRFHPALGYYQKDADGKSHKVAEYPAMLACIQGDDGHAVTLHRTYLQDG AKLAVPDAKKVLSSGINGAAVRLFEATEDLGISEGIEKSIALYLATGRPF WAGLNAGNLEKLWIPDSVRRVWIYADNDADGDFAGQAGAFVLARRLKHET HRTGNREVQVFVPKDASVDWSDLWLRRVQALSARAA >Daro_1854 Protein kinase:Leucine-rich repeat MPMNTLEALRAGKLAGSRRLKLACGLSEFPREIFALADTLEILDLSGNAL STLPDDLPRLQKMRILFCSDNHFTELPAVIGQCAQLEMVGFKANRIRQVP AAALPPKLRWLILTDNRIAELPPEIGHCSRLQKLMLAGNQLRTLPGEMAN CTRLELVRIAANRLTALPEWLLSLPRLSWLAFAGNPFCQEVPVQVGGAPI HWDDLHVSHQLGEGASGVIHQAEWRSAGKAQPVALKLFKGVVTSDGLPLN EMNACISAGTHPHLISVLGKLAAHPEDAHGLVMALIDSSFRNLAGPPSLD SCTRDVYPAALSFDLDAAIQIALGIASAAEHLHAQGIMHGDLYGHNILHG AHGRAILGDFGAASFVPPDDPLVAKALQRIEVRAFSCLLEELLERIGPAA LNPEKVEKLKSLLADCAQENVSARPLFAEIVSRLGALKLA >Daro_1302 Phage integrase MIQKFMAYPPGMELHGSTWRVNKRVPLDLIRTYPQQYPKGLIRFNTGESD KPKAGVKAWSWLCEIEDEFQRVRETGSKHRLQLPEEEAELIIRRIIHSRL SADEAIRVAGVDDHTFAKLDEENDESRQKEQLAIARGVLTANATDLAHEW LFAHGYDLPHDSVEFRQFALRLFRRLSEATKIADSRQRGEWVDTPPVPER ETKQVAPKLSEVIEHFIGKQDDTVPMFKKFRPTLGLFLEYVGDKSVDQLR QREIDEYFDLLCKLPPRWADAKRKLELSIRDLAKIEWPVCISKKTFEDGY MAAFRPFLVDAVRVFQDQGFPPHLTIAGIKYSGEREETENEQRAMRQDEL ARLFTGPEYVSFANDPECRHYYWLPLVGLYTGARINEICQLNPQCDIRQE QGVWIFDINEKTEGDERVKKTVKNASSRRKVPIHSELIRLGFLEYVDSVK EQGAKLLFPSWNPSSAGRAAGVAERWFRKLIKATGLRDETPQARLVGFHA FRHTFLNNAMNNDISFAEWLTGHAPEGVSKVVAKYQGEAEITKKAQIMES IRFTVEPPRASWLVN >Daro_3879 UvrD/REP helicase MSGLNPQQREAIHYLDGPLLVLAGAGSGKTRVITQKIAYLVQDCGFQPRN IAAITFTNKAAKEMQERIGKILSKPQADDLQISTFHSLGVRILREEAKAL GYKPRFSIFDSADCAGIISEAAKTVDKGTLRHLQSIISNWKNGLITPEAA LKLAKDDHETLAAHAYLSYEATLKAYQAVDFDDLIGLPVVLFQQHPDIAE KWQNRLRYLLVDEYQDTNACQYQLLKLLTGVRAQFTAVGDDDQAIYGWRG ADIDNLKKLPAEFPALKVIKLEQNYRSTVRILKAANNVIANNEKLFDKKL WSDLGHGEQIVVTACRDNDAEAEGVVMKLQAHRFQHRGKFKDYAILYRSN HQARGFEEYLRDHRIPYLLSGGKSFFDKPEIKDITAYLRLLTNEDDDPAF IRAATTPKRGIGAATLQVLGTYAGERHISLFQAAFEEGFAQRVQARQLEP LLEFCNFINRLQHRAGTEPAQQVLPDLLKAIDYETFLYDHEEERTAQTRW GNVCEFANWLNKKGEEQGKTLIDLTQSIALINMLDKQKDEDYDAVQLSTL HAAKGLEYKHVFLVGIEEGILPHRESVDPAKIEEERRLMYVGITRAQHTL NISYCERRKQMREFIPCEPSRFIDEMGKEDVRFSGGKDAALPDKETGNAR LDAMKAMLAGNKR >Daro_3648 AP endonuclease, family 1:Exodeoxyribonuclease III xth MKIASWNVNSLKVRLPHLLDWLAAAQPDALCLQELKLEDHNFPRAEIEAA GYQVAFSGQKTYNGVALLARQPIHDVICGNPHFPDEQKRLISGTVGDTRV VCAYMPNGQAVGSDKYDYKLRWLDALAVWLGEEMSKYPKLALCGDYNIAP DDRDVHDPKAWAGNILCSEPERAAFQRFIGLGLNDSFRLFEQPEKTFSWW DYRMLGFQKNLGLRIDHVLLSAPLAAKCSAAGIDRAPRKLERPSDHAPVW AEIS >Daro_3959 Integrase, catalytic region MKQRPRIYYTDSQKALMWERWRKGDSLQKIAQLFDRNHSSVQGVLAETGG IPPAPRCRSKRSLTLAEREEISRGLVAGLSIRVLAAQLGRAPSTVSREVK RNGGRECYRATQADQATWTRALRPKPCKLTENPGLAHIVANKLQSLWSPE QIAGWLKRTNPDNASNQVSHETIYRTLYIQTRGALKKELLAYLRRTRAMR RSRHHTQKTADHGRIVDAVSISERPATADDRAVPGHWEGDLLCGSKNSQI ATLVERQSRYLMLVKLSGKDTGTVTNALIKNARKLPQDLYKSLTWDRGKE MAGHKRFTLATDIQVYFCDPHHPWQRGTNENTNGLLRQYFPKGIDLSPYS QAKLSAIARKLNERPRKTLNYETPAQRFYQTVASTG >Daro_2742 DNA alkylation repair enzyme MNDFAHQVELLLEPLADPGKACRMAAYMKGKFAFLGIQTPPRRQATLPLI RAFHGNLIEAAQALWALPQREYQYVAIDLLRHHSKSLGSEQLPALEELVR CNSWWDTVDGLAVTIGGIVFRQPELACRMDILITSPDLWLRRVALLHQLE WKERTDQARLFDYCRQCANEKDFFIRKAIGWALRQYARTNPEAVRSFLAT HGKNLSGLSFREASKHL >Daro_0473 Excinuclease ABC, A subunit METIRIRGARTHNLKNINLDLPRDQLIVITGLSGSGKSSLAFDTLYAEGQ RRYVESLSAYARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGT VTEIHDYLRLLFARAGTPYCPDHNQPLEAQTVSQMVDTVLALPAETKLMI LAPVVANRKGEQVDLFTELRAQGFARVRVDGTVYEIDAVPKLAKTQKHTV DVVVDRLKVRDDMRQRLAESFETALRHAEGRAIALEMDSNVEHLFSAKFA CPVCSYALQELEPRLFSFNNPMGACPKCDGLGVIQFFDPKRVVTQPTASL AGGAIRGWDKKNQFYFQIIESLADHYGFSVDTPWNDLPEKVQQLVLYGSG NVAINFRYLNEKGTRFDRSHSFEGIIPNLERRYRGSESNAVREELAKYVS SSACPSCAGTRLRIEARHVRVGDKTLYEISRMPLGEARNYFNCLTLTGAK AQVADKILKEITARLSFLINVGLDYLCLERSAETLSGGEAQRIRLASQIG SGLTGVMYVLDEPSIGLHQRDNDRLLETLKNLRDMGNTVLVVEHDEDAIR AADYVVDIGPGAGVHGGFIVAQGTPAEVQANPLSMTGDYLSGRKSISAPK TRRVPDPNKQLKVVGAYGNNLKDVTLEIPGGLLTCITGVSGSGKSTLIND TLYAAAARHLYGSTTEPAPHKEIIGLELFDKVINVDQAPIGRTPRSNPAT YTGLLTPIRELFAQVPESRVRGYGPGRFSFNVKGGRCEACQGDGMIKVEM HFLPDIYVPCDVCHGKRYNRETLEVQYKGKNIYDILGMTVEQAREFFDPV PNIARKLQTLVDVGLSYITLGQSATTLSGGEAQRVKLALELSKRDTGRTL YILDEPTTGLHFQDIEMLLSVLQRLANNGNTIVVIEHNLDVIKTADWIVD LGPEGGDGGGRILVSGTPEEVAKCKASHTGRFLKPLLEKKK >Daro_0806 AAA ATPase, central region MSYQVLARKWRPRNFSTLVGQEHVVRALTHALSEQRLHHAYLFTGTRGVG KTTLARILAKSLNCETGITATPCGTCSACQEIDSGRFVDLLEVDAATNTR VDEMRQLLENAVYAPTRGRFKVYVIDEVHMLSNSAFNAMLKTLEEPPEHV KFILATTDPQKIPVTVLSRCLQFNLKQMPVLAITGHLGHILQAEGIPFDQ PALALVARSAAGSMRDALSLLDQAIAHGAGRVEEAQVRSMLGTVDQDYLF TILEALHGAEPSALLQVAADLGIRSLSFSAALQELGALLTRLQIAQCVPG AIDDDEPERDRLKGLAAALSPEFVQLAYQIVNAGRNELAAAPDEYAGFVM TLLRLYTFRPSTVADVVGAAVPRVNAAGAMPKAVRATPATQSRGDSIPEP VIIPKLPPIASGEMDWHQIVASLSLSGLARELAQNCELRQLSENQCLLRL SPAQGHLQMRPNPDRLQQALSDFFGRPLQVRIELAQNENVTPAETVGRQR QEQQERAATAIAQDTFVRDVIESFDASLVESSIKPIA >Daro_0963 NUDIX hydrolase MSHDAHLIESEVSTETVFAGALLNVRKDCVLLPNGKESIREYIVHPGAVV ILAFLDNGNLLFERQYRYPLRRVFLELPAGKIDHGEAIIDTARRELKEET GYVASEWEYLGMMHPCIGYSDERIEIFAARGLHLAGERELDHNEFLDVIE LSPAEAKQAVWDGRITDAKSITSLFWLDRP >Daro_1384 Ribonuclease H MNATTWHAWFDGATKHTNPGIRGVGGLLKGPAGERIEISEDIGEGTNNEA EYAALMAVLDAAVAAKVQDLIVYGDSQLVIKQVNGEWLINAKGLVPMCKT VRRLMAQIPKVSLAWIPREENTEADALSKKAVGVTGQGPVDRTIWTNITE IAKPFGLSGVAFGKRMDLAKLRESGKPTQLALDKGCALLVENSFGHQVYW HKKLLPAALREAMLLD >Daro_0356 ATP-dependent DNA helicase RecG MTTSGASAPASPPIRASEALQKKLAKIGLHSEADLLVHLPLRYEDETRIT PVKRAFGGEAVQIEVVVQSNEVQFRPRRQMIVRAADDSGEITLRFFSFYP SQQAALSEGSRLRAFGEVRGGFFGAEMVHPRFRKVGGDEALPTEMTPIYP STAGLANSALQKLIGKALAVGDLSDTLPETLRQRLKLPGLARSLNFLHRP PPGTDLDTLHARNHPAWRRVKFDEVLAQQLSLRRAYLARREQGAPVLVAQ DDLGARLLDQLPFGLTGAQLRAMAEIADDLAQPYPMQRLLQGDVGAGKTI VAALAACQAISAGWQAAFMAPTEILAEQHYLKLKDWLEPLGVKVAWLSGS LKTKAKREQLAATAAEAQLVVGTHALIQDGVDFARLGLAIVDEQHRFGVA QRLALRKKGNNPHQLMMSATPIPRTLAMSYYADLDVTVLDELPPGRTPIK TRLVADNRREDVVGFVKKSVEEGRQAYWVCPLIEESEALQLQTAQDTYEQ LSIDLPELVIGLVHGRLKADEKQAVMAAFAAGDIDVLVATTVIEVGVDVP NASLMVIEHAERFGLSQLHQLRGRVGRGKYESSCVLIYAGPLGEIARQRL KIIFENTDGFEIARQDLQIRGPGEFVGARQSGVPLLRYADLEMDADLVEM ARDVAEEMLTEHLELAERHLKRWLGSREELLKS >Daro_0802 Resolvase, N-terminal MTTTKLVSYHRVSTSKQGSSGLGLEAQQASIEAYRNRIGASLVASFTEVE SGKNNERPELLKALHHAQVTGSILVIAKLDRLSRNAAFLLTLRDSGVKFV AADMPEANNLTVGIMALVAQEEREAISRRTTEALQAAKARGTKLGNPNGA AALLKAGKGNAAGVEAVKAKAEDYAKQMRPVIEHLQAQGKTSLGALAEAL NGGGYRTPRGGSWHKTSVGNLLGRLALAP >Daro_1372 Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902 MNIVTVGIDLAKNVFALHAVDQYGKAIFIKPKVARGQLLEMVAQLPPCLI GMEACSGAHHWAREFSRVGHTVKLMAPKFVAPYRMSGKRGKNDAADAAAI CEAVTRPNMRFVPVKDVDQQAILCLHRTRQGFVEERTALYNRLRGLISEF GIVLPQKVERLRREIGAHLEALPGWANRCVGDLLAHADRLNEHIDEYDKA IALAAKQDQRSRQLMQLPGIGPTTASALVASLGGGHDFKNGRQLAAWVGL VPGQYSSGGKARLGRITKAGDAYLRSLLVMGGRSVLAGLGDKQDRFSRWA RNLVERRGYWKAAVAIAAKNLRLAWAVMHYGEEFRRIEDLA >Daro_1297 conserved hypothetical protein MPSFSALLNEIRHCQLCAEHLPLGPRPVLQAARSARILVAGQAPGRKVHA SGVPFDDASGDRLRQWLGVSREIFYDPARIAILPMGFCFPGTGKSGDLPP RPECAPAWRQRVLAELGQIEMTLVIGQYAQAYHLPDATGNLTDTVRDWRR HWPAVLPLPHPSPRNNLWLSRNPWFEAEVLPALRQRVAEVLG >Daro_0690 RNA-directed DNA polymerase (Reverse transcriptase) MALHAKAKSESGYRFYALYDKIYRTDILAHAYAQCRSNKGAPGVDRQDFE DVEAYGVRRWLEELALALKEESYRPDPIRRVFIPKANGKLRPLGISTLHD RVCMTAAMLVLEPIFEADLPDEQYAYRPGRNAQQAAEEVKNRLYLGQTDV VDADLSDYFGSIPHSELMKSLARRIVDRRVLHLIKMWLECAVEETDQRGR KKRTTEAKDQGRGIPQGSPISPLLSNLYMRRFVLAWKKLGLERSLGSRIV TYADDLVILCKCGKAEEALQWMRTIMGKLKLTVNEEKTRICQVPAGTFDF LGYSFGRRYVPRTGKPQIALWPSKKSIRRMVEKIHDMTERQTGWQETTEL VGKLNRTLRGWANYFSVGNVSRAYRALDSYTATRLRRWLRYKYKLRHCKG GSYPLSHLYGYFGLVRLGARGRSEAWVKA >Daro_3654 Phage integrase MATFRQRSGGWQVRVRRQGYPDVVKTFKLRQDGEKWARAIERELDMGCYV HRTEAERMTLAELLDRYGKEVSPQHKGHREELWKIGVILRDRIAKYSLVA LTPMLVADYRDRRLQVVADATARHELNIISAAYKVAAREWGIPVSNPVSQ IKRPPAGRERKRRISQAEIEAIIQHSKTRELPDFLCLAVTTGMRRGEIIR LRWQDIDMGRRLAYLSDTKNGEDRVVPLSSEALAVLQAMPRRFDGRLFSL EPRGFSKAMRKSVVRARRAYEAESSLAGVQPDPEFLCDLRLHDARHEAVS AFFERGLDVMEVASISGHKTLSCLKRYTHMRAERIARKLG >Daro_1965 Transcription-repair coupling factor MSASKPLLSLPALPKAGARLDLPSLAGSADALALAEIAVGNPGKLLAVVT ANAADAQRLLDEIPWFAPNLRVRLLPDWETLPYDTFSPHQDLVSERLATL WAATQGELDILLVPATTAVYRLAPPAFLAAYTFAFKKGETLDAEKFRSQV TLAGYAHVTQVVSPGEYSIRGGLIDLFPMGSQLPYRLDLFDDEIESIKTF DVDTQRTVYPVPEVRLLPAREFPMDDKGRTHFRQAFRETFEGDPAKSGIY KDVSQGIASAGIEYYLPLFFDETATVFDYLPRDAVFVTHGDAPAAIAAFW NDTRSRYAMLQGDKARPLLPPEQLFLTDEAFFTAANSYGRLVFSAKTDHP AATALPDISVDRRAEDPLGKLKAYLASQPGRVLLLAESAGRRETLATMLT EHGLKPAASADFAGFAAADAPLALGVGPLHGGFALPDLAFITETELYAGA PRRTRREAARKASFDNWLKDLTELKVGDPVVHESHGIGRYRGLIRMDLGN GEQEFLELHYANEAKLFVPVAQLHVISRYSGAEPEAAPLHTLGSGQWEKA KRRAAEQARDTAAELLTLYAARAARQGHAFSFQENDYEAFADGFGFEETH DQAQAIAAVIEDMRSGKPMDRLVCGDVGFGKTEVALRAAFCAVAGGKQVA VLCPTTLLCEQHYQTFVDRFADWPVKIAEISRFKTAKESAQALQELAEGK IDVIIGTHKLIGKDVKFQRLGLVVIDEEHRFGVRQKETLKAMRAEVDVLT LTATPIPRTLAMSMEGLRDFSVIATAPQKRLAIKTFVSKFSDGIIREAVL RELKRGGQVYFLHNEVDTIENMREKLEKLVPEARIVIGHGQMNERELERV MRDFTQQRANLLLCTTIIETGIDNPHANTILINRSEKFGLAQLHQLRGRV GRSHHQAYAYLLVQDEKAMTKQAKQRLEAIQMSEELGSGFFLAMHDLEIR GAGEVLGDNQSGEMQEVGFNLFTEMLNRAVAHLKQGKAIDTVDLTQPLGI STEINLRTPALLPDAYCPDVHERLTLYKRLANCENAEEIDTLQEELIDRF GELPLQGQSLLATHRLRILVKPLCIQKLDASTDQITLQFGPEFAKNPPIE PIKIIHLIQNNRSYKLAGQDKISLLRHCPTLNDKVAAVKDMIRQLSH >Daro_2385 Rhomboid-like protein MPSLHDQLRHAMPQLHLTPLLIAANVLIFVAMLLNGASLWHAQNTIQLAW GANFGPATQDGEWWRLGSALFLHFGILHLLLNMAALWDVGQWVERMYGTL RFAVIYLTAGLTGNLLSLVANAGAAVSGGASGAIFGIYGALLSYLWLERS SIHRGEFRWLFWAAIGFSGATIIFGLLVPGIDNAAHVGGWIAGVLMGVLL IRSEPGIVAGPQLGRWVSGLFFLFLVAVIVGQIPKPAYRWSEEKQIRGEV FEFLQEDAAITRNWDNLLWQGGKKGVSADELADAIESMVAERYDQSFEEL LALPIDENLPSAPTVEHLKLYAEQRRDASRAMVEGLRARDKSKIKKALDQ ARQSGKVN >Daro_0801 hypothetical protein MGLSSSLSIIQGRFRIAKENPLLWYSLLLAAGTVTAIWYWPAPVTDSNPS DFRIRLWGMVLQLIGAYTVWHDLTESARKFGKTSLLANTIEWAKRLIFGH GHALGGVCATTDNVCFGGRATSRRPQPPDGSPLESRIETLEYNLSKVDEE LSQALRQITDTKTKLKEQIKEESKKREEAHKEIQKDLHEAIVGNYATLVF GAFWVAIGILVSALAPEIAKAVAGQWALISRTI >Daro_3293 NUDIX hydrolase MSMIWKPHVTVAAVVQRDGKFLLVEEETEAGLAFNQPAGHLEEGESLLDA VVREALEETAYHFKPTYLIGVYNWTHPTKEDTTYLRFAFGGELRGYEAGR PLDDGVVAARWLTLDEVKATQARHRSPLILRCIEDQIAGKRCPLDLLVHY G >Daro_1779 Helicase c2:DEAD/DEAH box helicase, N-terminal MSSLQEIFSPDGPLARAIGGYRVRDQQLEMAERIAAAIHRQAVFIAEAGT GTGKTFAYLVPALQSGGKVIVSTGTKTLQDQLFNKDLPMVRDALKAPVKI ALLKGRANYVCPYHLQHAIIDGRFLTREDAADARRISVFAKTTQSGDKAE CIEVSENSPVWGHATSTRDNCLGQDCPDYKECFVMAARREAMAADLVVVN HHLFFADVMLRDEGMAELLPACNTVIFDEAHQLPEVATLFFGDSVSTAQV LDLARDTRAEALTSARDCLALPEASKTLEKAAKDLRLAVGVDTGRFSYGQ LEEKPDFAPALKALEAEVTAFAALLETQAERAEGLEKCWQRATELAQQLG QWQNLTDLSYVRWAEAFTHSLQLTSTPLNVAEIFRKQMGGHPRAWIFTSA TLAVQGKFHHYCAELGLGDPDSACWHSPFDYGEQAILYAPLGMPDPNAWN YTDAVVDAAWPAVKAAKGGAFFLCTSLRAMRRTHELLKAKLEDEGIDMPL LVQGEGSKNDLLQRFRHHGNSILVGSQSFWEGVDVRGEALSLVVIDKIPF APPDDPVLSARIEQMKREGRNAFMEYQLPRAVINVKQGAGRLIRDESDKG VLMMCDPRLISKPYGRRVWQSLPPMKRTRELQVVLDFFANR >Daro_1659 Histone-like bacterial DNA-binding protein MIVRSELSQRLHQRFPQLNRGDIDVAVGEILGAIGQQLAKGGRVEVRGFG SFALNYRPPRLGRNPMTGERVAVPAKWTPHFKAGKELRELVMRP >Daro_1648 Histone-like bacterial DNA-binding protein MDVCVKELLDQIGQTLVAGNRVEVRGFGSFGLTYRPPRLGRNPKTGDKVA VPGKYVPHFKAGKELRELVLTPK >Daro_4152 RecA bacterial DNA recombination protein MDDNKAKALAAALQQIEKQFGKGSIMKMGDAEIDEGIQVVSTGSLGLDIA LGVGGLPRGRVVEIYGPESSGKTTLCLQVVAEMQKLGGVAAFIDAEHALD PQYAQKLGVNVGDLLISQPDTGEQALEIADMLVRSGSVDIIVVDSVAALT PRAEIEGEMGDQMVGLHARLMSQALRKLTANIKKTNTLVIFINQIRMKIG VMFGSPETTTGGNALKFYASVRLDIRRIGAIKKGDEVIGSETKVKVVKNK VAPPFREAIFDILYGEGISRQGEIVEMGVAHKLVDKSGAWYAYKGEKIGQ GKDNAREFLKANPEIAQEIEAGIREAASTNVIKPVKAAKAADA >Daro_2330 TraH MKHYDHPHLRRSAAAFLALLLAIPSFQLQAGDLNSEVNNMFNNLGSIGNY TAPGAFRGQTFNTYTGGNLMMRSPNKVYQLAAIQFPSAKAGCGGIDVFGG SFSHISATEFKNMLKNITAALPGIAFQLALEAVSPLLGGLTKWAKGLETW INNARINSCETAKAIVSTAAESIGYSSQETCADLAIEMGMESDRDAARRR CATDRPSILSSARSSADPKVKNKAPFVGNLTWKALQYTGAYLDDQERELI MSLVGTIIYYPEESARDPEPIAPTLTSISQLLYGQGAAAGTDVVQHVLKC NDYSNCDVVTLNTTYTHTPFTAKVEAIMRSIAEKITTRTAIPNNSTEVGF VNQTTEPVYKMLSIGTSIPGSGLADSLIAQYRDVIAADYAYVFLERNLRL GMAALDKNYTLQQSQREQANQVRQRAQAMLTQLSQEKNLLYQKVGSFRAV SNHLEQLERQLRSSMPQHVMDMLGQQAAYLSQ >Daro_0483 Single-strand binding protein MASVNKWIGIGNLGRDPETRFTASGEAICNFSIACTESWKDKQTGERKEM TEWVRISAFGKLAEICSQYLKKGSQVYVEGSLRTRKWTDKDGQERYTTEI RCDDMKMLGSRQGMGAPAGGGGGGGSGYDEPTDYSPAPPKNKPKPSFDDL GDDIPF >Daro_1500 hypothetical protein MAHIMRAFFHEKQAADMTNISSANSATVLGQNHGYRFDGDFVHLNADVNF SDDDLNADAVWSLQLWASDNGFSGTELTGVKVAELAIEPMAGGIIASACC HAIPPAGAVDHALALALVAATADGQVQVRDLAVYESAENFFQPRLVGKVS CTLKDGSAALAIEAIANPRAEDNLSGTLALEVWALDTPYAGGNWTGSPVA SVIVGILGGGNQWNDCLYTVPAAMPAEGAALTVMLREWTPAGYVTRDYRN FAATPTKVAAVKAKPVVKARPAAKPKAAVAAKPVVAAKAPVAEVKAATVA VAGKPAKKAAAKPVSINKASEDELAAIKGLPREVARAIIAARPYASLDDV CKAKGMGLKKLAKLRDLLAL >Daro_1220 DnaB helicase MNQRPQKPRIPDSTLDHLRVPPHSIEAEQSILGGLLLDNQAWDRMGDMLT DADFYRDEHRRIFRQIRNLLEKAKPADVVTVAEALDAAGEGEQTGGLAYL GELAANTPSAANIKRYAEIVRERSVLRQLVATADEIAADALNPLGRDAET LLDEAESKIFKIAEAGAGHNEGFVHINPLLTQVVERIQELHDRDNPSDIT GVPTGFIDLDSKTSGFQPGDLIIVAGRPSMGKTAFALNIAENVAVDSGLP VGVFSMEMGGAQLAMRMLASIGRLNSQSLRTGRMSDEEWSKLSFALGKLH EAPIYIDETGGLSPANLRARARRLARQYGGKLGLLVIDYIQLMSGNRQGE NRATEVSEISRSIKSLAKELQVPIVALSQLSRKVEERTDKRPMMSDLRES GAIEQDADVILMMYRDEYYNKDSNDNKGLAEVIIGKQRNGPTGTVRLAFI GEYTRFENLASGGFVDSQN >Daro_2123 UMUC-like DNA-repair protein MTDSASTSLPKRRIAHLDMDAFFASVELLNYPELRGQPVVVGGRNVNQPI SQPDGTKRFGRLREYVGRGVVTTSTYEARAFGVFSGMGLMKSAEMAPGTI LLPANFDAYLNYSRRFKAAVATIAPLIEDRGIDEIYIDLSDIDEESLPLA RRIKQAVFDATGLTCSIGITPNKLLSKICSDLQKPDGITILGIADIESRI WPLAAKKINGIGPKANERLEKLGIQTIGQLAATPVELLLNHFGRSTGQWM HQVAHGRDDRPVKTSRETKSISRESTFQRDLHAKQDRSELSEIFTGICLR VADDLKRKGLVAKTIGIKVRYADFQAVTRDFTLDLATDDGMTIRRAAGEC LKRVPLEKRIRLLGVRASALASASTLADLPAQQSLEI >Daro_3722 Conserved hypothetical protein 95 MNSVRIVGGEFRRRVLKFPDSEGLRPTPDRVRETLFNWLGQALDGWHCLD LFAGSGALGFEAASRGAARVVMVEQAPKVLAALHENHESLHKPSAIEIIR ADAIQYLASTKAKFDLIFLDPPYKKGWIDRLEPLLPDVLNEDAAIYVEAE YEIKSLGDWRTVRHGKAGEVHFHLLRRETGGESA >Daro_0538 Methylated-DNA-(protein)-cysteineS-methyltransfe rase MQTRPNQTYQAIVAAPGFCLGVQCDDDEITGIDFLEPRPEIAASSPLAAE AVRQLKAYIADPHFAFGLPLRPAGTTFQRRVWEQISAIPTGQTHTYGEVA KNLKNAPRAVGQACGSNPYPVVVPCHRVVATGGGLGGFSRERGGFLLDVK RWLLTHENSLPG >Daro_1940 conserved hypothetical protein MPVPSSLALADVLARGDVWRGDMLASLPEAAIPSGHAELDAELPGGGWPR GNLTEILVDRGSVGEMSLLLPALAKLSAEGGWLALVAPPWQPHAPAWAAA GLALERLVIVQAGRNVAWCVEQLLASGGFAGVLAWPEAGIDARALRRLQV AAEGRPVFACLWRSTAVAQVPSPAPLRLMLNTGREAGHGELSVRIIKRRG RPVSRSLALSIPRPGRSSRAVAGPALSLVADRGIAATPVA >Daro_0925 Cyclic nucleotide-binding:Protein kinase METIGKYRVVRELGKGATATVYLCDDPDSDRQVAVKVIRFGQDSAAMSRR MRKLFQNEGMVSKRLNHPNIVRVYEAVVEEDFAYLAMEYVEGFSLEEHIR IDKLLPMHRVIGIIFKCCMALDAAYRQGIIHRDIKPANIMVAANDEAKIA DFGLALNMNKDMDRDSTFIMGVGSPAYMSPEQIKGYPLNQKTDLYSLGVL LFQLLTGRLPFRANNQATLIYRIINTDAPAVTALNPNLPEGLNAVLRRAL EKDLYSRYRNGAEFAKDLSAVRYQMLEEDQTAQDTKHFEMLRRLDFFTEF ENIEIWEVLRVAVWREVSPNVALIRQGESNKFFGVIISGSVEISIDGKAL CRLGPSEPVGEVAYLHPASDQRCSTAVTLEPTLFLEINAAALALSSEELL ERMRNVLLARMIGRMREVNRVAAAQGLPAVQSATGSLTGGSRSGGGMDLS LSPM >Daro_3849 Protein kinase MAQQANQALPNGHPLEEYIIDRQLSLGGFSIVYLATDPEGRQVAIKEYLP NSLALRSKGEIKPVITAEHLGAFRYGMKCFFEEGRALARLSHPNVIRVLN FFRANDTVYMVMEYEHGRTLQEFIQKHQGHISERFIRGVFTRLLNGLREV HSNKLLHLDLKPSNIYLRGDNTPVLIDFGAARQTLVTDQPILKPMYTPGF ASPEHYGNRKDLGPWSDIYSVGASMYACLAGVAPQAADARMKKDTLPPAM MRWDGQYSDRLLEIIDWCLNLNHLYRPQSVFALQKALVETITPPRPKANP SWLGRFVEKLRKPI >Daro_0282 Putative RNA methylase:THUMP MNKYFAICPRGLEELLVEELRAVGAEELRATHGGVFFSGDWSVCYRANLE SRLATRILWHIVKGPYAKEEDIYRLAVRQLWPNHFSVSRTMRVVTTAIKC PLKSLDFVTLRVKDAICDRFREDLGERPNIETRHPDVSVHVFLSENECTL YLDTSGQPLWQRGFRKASVDAPLKENLAAGILKMTGWQPGTPLIDPMCGS GTFLLEAVQMALDRAPGLDRGFAFELLKSFEAMNWANIRAAAEARVKPVE PMDIRGYDNDDKAVRATRRNLQEAGFGAAVMVDNSDVLETQPLTDHGILV TNPPYGERIGEQDELAALYPQLGTALKRHWAGWNCFFFTADMRLPKLVGL RPSRKTPLFNGPLECRLFEIRMVAGSNRKL >Daro_1235 ATP dependent DNA ligase, central MSRLLGALLFGLALSLPMVSSAVEAPPILLANVYRDQVDVARYLVSEKLD GVRAIWDGQALRFRSGRPIHAPDWFIAGLPKQPLDGELWIARGQFERVSG IVRREVPDDAGWREVRYMVFELPGAPGPFSERADQIRVLAQRANVPWLRA IGQFSVANRASLKKHLDEVVRGGGEGLMLHLADAAYETGRSDVLLKLKPW QDAEAVVVAHQPGKGRFAGHLGALKVRTPEGREFLLGSGFSDLQRQQPPA IGTTVTYRFRDLTNKGMPRFASFLRVRDE >Daro_2564 Protein of unknown function DUF1173 MDLQRFAIKGRVIGADDSQLQEALAQVHDTLERPRCLCMPGGVEMYVARH SLFVVKRMPDSGSAHHPGCPSYEPESQQSGLGELLGEAVLEAEPGRVELR VDFPWTRVIGHSVPRGEAQEVAEVDVPRRRMSLRALMHFLFERAGFNRWS PAMAGKRNQGVLRKYLLEAAEEITVKGVPLVERLYVPEPFSESGKAEAAQ RRREKLAVLGPRDGQAPLAVVIGEYKASEATAQGHRVWIRHMPDAPLLIA GRTWERIERVFAPLFEARDADIRHSVRLVMAALICARREHTYEIDSVSLM LTSEQWIPIEGVHELPLIGALVAQQRRFIKPLRYDARSAAPFPNALLLDT GPSPMPLHVLSVFMNPKERAVKEKAIARVGEMAWVWSTDQVMPSLKSISD SR >Daro_3870 SNF2-related:Helicase, C-terminal:SWIM Zn-finger MAVVTLETFTAEHVADWFATRDINKAKPYVDLVRDLEINGSQLSAVVPGS AKTPYTVQAYLSQAQSGEMMVVSRCTCNVGRHCKHVAAMLLKAIEERNPK ERVSNSVLSWVEDLRRTSIAVAKKKARPASARQQLFYILKWTADKRQFGI EIRKGKFPESAEEWWKVDRALVTPPQFVTEEDLGILRLIWADRGHETGLR AFGLGPTHGAEILQRMAASHRLYPEDDLGLPLNASATRPASIGWQVDGMG FQRPYLKPEPSAEMIIAVDPPWYVDLAEGETGPLEVTGNPGVVNRLFSLP PLSSKEAALVAEALSELAPDLPLPGDDAGARLRLVDAPLQPILQFETLHT HGHRAWRNYPQNFGGDSFDVAKVVFRYADTDVRPEEKSEFITLPEGETIR LKRRPEEEAKALLTLEDFGLQKIPSHTLHTFGSPPEGIYGLAEESLWVPF MQDAQRLKEAGWQIEFPEDFRHHVIEVDGWEAELFEADNGWFNLDMGIIV EGERLPLAPLLANLFRTDPRWLEATELERVPDTEGIDLYTARGKRLRVPA GRIKPLAATLIDLFDGFSGGNVLRLSRFDAPRLAELSDISRWQFRGQSDI MAMAERLLDAQGIGDVAPPAGFRLDLRPYQKEGLAWLQFLREHDLSGILA DDMGLGKTAQTLAHLLLEKEAGRLEKPALIILPTSLIFNWKNEAARFAPD LKVLSLHGPERKTQFGEITKHDVILTTYPLLWRDADELMQHSYHLLILDE AQTVKNAQSQSAEAVRKIDARHRLCLTGTPLENHLGELWSQFDFLLPGFL GTSKQFNRHWRAPIEKQGDMARRSLLARRIRPFILRRKKEDVAQELPPKT IIIRSVELEGSQRDLYETVRAAMDAKVRDEIASKGFARSQIVILDALLKL RQVCCDPRLVKASSARKVTERAKLDLLMAMLPELVDEGRRVLVFSQFTSM LALIEHELDKAGITYVTLTGDTVDREVPIRRFQDCEVPIFLISLKAGGVG LNLTAADTVIHYDPWWNPAVENQATDRAHRLGQDKPVFVYKLIVSGSIEE KILALQERKAELAAGILSEDHRVDVKFGTDDLAALFEPLPE >Daro_4062 DNA recombination protein, RuvA MIGRLTGILAEKNPPQIVLDVNGVGYELDVPMSTFYNLPAAGEKTKLLTH FAVREDGHYLYGFLTEAERFAFRQLLKVSGIGARTALSVLSGLSVGDLAA AVAQQELGRLIKIPGIGKKTAERLLLELKGKLADATGVSLHPAVDDSKQD ISNALLALGYNEKEAASAMKQLPADVSTSDGIRAALKLLSKV >Daro_3726 Formamidopyrimidine-DNA glycolase MPELPEVEVCRRGLEPELAGQVIQGVVIRAPKLRHEIPPALATLLPGCRV VAVRRRGKYLLLDCERRGVQGTLIIHLGMSGNLRFVPFDLPPAKHDHFEL VLAGQILRFADPRRFGVVLWQPGPPASAECHPLLATQGIEPLSEMFTAEW LYEAIARRSGPIKPTLMDSHLVVGIGNIYASESLFRAGISPLRAANRVSR ARYEILVPAIRETLSDAIAAGGSSIRDYVHSDGGAGCFQIQAGVYDRANQ PCLRCGGVVRQIRQAGRSTYYCTGCQH >Daro_2290 ATP-binding region, ATPase-like MEHIMQIQVQINEEGALRNQRYAFTDRFTLVSELLQNARRAGAMRIEIHY DATTQVLRVEDDGRGLDDFQKLLSFHESGWDAATSAEERPFGVGFSKCLY AATRCIVASKHQRVDINTAAALAKASIEVEPITEAVAGTRIELHGVDLPD LGNRIESLCLGFPVEVVFNGKPLLRRFAAAHLATMASPMGAVHLTGTRDG KFSYNTLVFLQGFCVMKPNYCPFDEVNIVHLDSRQFMARLPDRDKLIDED VQRKRIDTELKACWRQTLEVAKTQLSPERFVAIYYAAMRAWGHWDLLNDL DVLPVELFDEIVDYPIQDDDRSYVRQVAVAPTRHAVESGKVTLVSLDWLG DDNAARWMLARAKGYLVFDWIGLSSEHWAWRHVRFLDQETVQVEALSEQI RVQLEGRWVWPTVILCESVILRSAKDVAEITDAGVCHGDVLYIPAGETSG EPVRQASSFIDENDQFLASDLDADRDALADLIRRLRSVDPVQTLDSLLQE LRLGRYPLLHGKAFQVTVGVGAAPGHSVALVAEAGSANTGAGHAGS >Daro_2336 Phage integrase MLTDMQLRALKPTGQIYKVADQQGLYVAVTRTGVVSFRFDYRVNGRRETL VIGKYDPTVGTKKPRELDGLDYGMSVSLAEARLLLTRAHRSVEQGESPSR SKVEKRTEAADALTFGSWAEKYFAEADLAESTKAMRKSVYDRNLADEFGR LKLEEITPVRLMARCEKIKERGAAAPAVHAREIVLQVFRFIQARGLKIDN PAESIRPSAIATFKARDRALMPAEIHTFFKALEQTATAATLRLAVKFMLL TMVRKTEFIEAKWDEVNFETAIWTIPKERMKAGRPHNVYLSQQALDILVA FKTCFSASSYLHPGRYETALPISSATLNRVIDATVKVIHDRGEEFAPFTV HDLRRTASTLLHEAGFNTDWIEKCLAHEQRGVRAIYNKAEYAEQRRTMLQ AWADMLDAWIKNSASVVPIRRSAGVA >Daro_1602 Protein kinase:GAF MSIKIGRFEVRGELGRGAQSVVYLGFDPQLQREIAIKTLHFSRPDPAQNK VLLDEARTVSKMRHPNIVPIFEAGEERGDLYLVFEYVPGKNLAEFLRQSG ALPPVKAVTILGKVLDAVAHAHAQGIIHRDLKPSNILLDDDGTPRVMDFG IAARIDGASEGTDRVTGTPAYMSPEYILKRELSERSDVFSAGVILFEMLT GRRAFPGDNVSQIMQRVAREDLVLPEDAGVDDRLSSVLNKAVARDPSVRF QTAAQFAEALDNYLNPEDELGATGAGRQSTLEFLLRRMRHKSDFPALSES VSAINKIANSETESIDKLSNTILKDFALTNKLLRLVNSAYFRPAGGGSIS TVSRAVIVLGFEAVRNIAITVLLFEHLQNKGNANQLKEDFLRANLAGVLA KDIGATARMRDLEQSFICALFHSLGRLLSQFYFPEESDEIRRVMAQKNCS EESAALQVLGISLEDMGMAVARQWGFPPLIVSSMRKLPAGPVKKPAQQED RLRVLSGFSNELCDSIAQSTPEIRDRELKKAMTRFAEAIDLNPKDVFQTV QRAVEEVADFARVIHLNLQQTSFGKQMRLFAKKGGTEVGDTNDTDFADGT VLGESDPLGAVEGEAGLQILDAQAILTAGIQDISNTLIDGFQLNDVLRII LETMYRAMGFKRIVLCIRDVKAGAMQGRFGFGPDANELARAFRFPLSFTP DIFHAATSKGVDLLISDINDPKIAGRIPDWYRKAVPAHSFVLFPLNIKGS PVALIYADRDEPGGISIPEKELQLLRTLRNQAVLAIKQGS >Daro_1312 Resolvase, N-terminal:Resolvase helix-turn-helix region MSGQNVGYLRVSTLVQNTARQLEGVTLDEVFEDKASGKDTSRPQLEACLK HLRKGDTLHIHSLDRLGRNLDDLRKIIKELTGRGVVVKSHKENLTFTGDD SPMANLLLSMLGAVAEFERSIILERQREGIAIAKAAGAYKGGKKKMTEEQ AQEIRRRVANGDKKAAVARDFGISRETLYQYLNRSID >Daro_1306 Transposase IS3/IS911 MRRPRRNHTAAFKAKVAIAALKGDETLATLAEKFDVHPNQITQWKTQLLE NASGVFATAAEKQAATPDLKDLHAKIGQQALEIDFLAGALGRIGDASAKR >Daro_3142 DNA repair protein RadC MAITDWPEGERPRERLLAHGPAALSDAELLAIYLRVGVRGKSAVDLARDL LHRFDGRLGTLAEASLEELASVSGIGMAKAAQLKASFELTRRALSQEMAT RDSFTSPGKVRDWLRLKLASRGHEVFMALWLDAQNQLLKAEELFTGTLTQ TSVYPREVVKAALAHNAAAVILAHNHPSGIAEPSRADEMLTRSLKEALAM VDVKVLDHFIVAGNTPPLSFAERGLL >Daro_1281 Integration host factor, beta subunit MTKSELIAQLAERFPQLVAKDADFAVKMILDAMSEALVRGDRIEIRGFGS FALNYRPPRVGRNPKSGEKVSVPAKWVPHFKAGKELRERVDQAI >Daro_1653 Integrase, catalytic region MIDKAHDLPVVRQVQLLELSRSSVYYQPQPIPEDDLRLMRRIDELHLEYP FAGARMLRDMLKLEGHGIGRKHVGTLMKKLDIQAIYRKANTSRRNQAHRI YPYLLRDLAIDRPNQVWAMDTTYIPMRRGFVYLSAVLDWATRRVLAWRLS NSLTSDPCVDALEEAIMKYGRPEIMNTDQGSQFTSSAFIGLLQESTIQVS MDGKGCWRDNVFVERLWKSVKYEEIYLHGYDTVSEVRQALARYFDFYNRR RPHSTLDGQTPDTAYFNQPLLAAAA >Daro_1327 Integration host factor, alpha subunit MSFRNHASMTITKADLAEHLSNEIGFNNREAKEVVEAFFKELSDCLERGE EIKLAGFGVFSMRNKPERPGRNPKTGEEIPITARRVVTFHASGCLKSAVE SSPNLSLKAVKAA >Daro_3653 ATPas MVALKTAGRGIVVEGPSGIGKTTSVINAIKDAGLAEKVLVLSARKADEVE LIKELPKQVPFGVVVIDDFHRLDRKVKKQIADLMKSLADDGAAHSKIIIL GITNAGQTLISFGKDLANRIEVIPFEANPEYKVEELIKKGELALNININI ASDIVKDAQGSFYLAQMLAYNTCLRAGILKWSESLIETQESHESVKTQVM TALSRIFHDTAISFARGTKLRREGRAPYLHLLYWLSQSKTWVINAEREAD RHPEQRGSVSQVVTKGFLEELISSSDDLQKVLHFDNTSGNLAIQDPQFVF YIRNLSWPQFADEVGFISLEFPSRYDFALSFAGSDRDIAEAIFNCLSENE LEVFYDKNEQHRILAQDVEEYLAPIYASDAQFVVCILGPDYPKKIWTKFE SSQFKQRFKSGDVIPIVLSSAPLGVFDTATSVGYLPWDRASVFEYQLKNV VETLLKKCAETRSSRRHEFDGDNNFLTEQIALNLVAE >Daro_1919 SMC protein, N-terminal MKILSLRLKNLNSLKGEWTIDFTKAPFTDNCLFAITGPTGAGKSTLLDAI CLALYHQTPRLKTISATDNDIMTRHTADCLAEVEFEVKGAVYRAFWSQRR ARDKIDGALQAPKVELAAGDGTILSTQTNDKLKRIAEITGLDFPRFTKSM LLAQGGFAAFLNASANERAELLEELTGTEIYGEISRKVFEQARDAKSQLE QLKARADGMELLSEEQRAAMQAEVTRLDTQLTDTQRRHQQTQSQRQWRLD LAQGEQEVKTAEARQQEADAALTAAAPDLKKLADSEPAEALKPLHQQWQQ ASAACQQTETELKALHAEREKLQAHQLAQHQTASQLSAQVAAQAQQALQQ SQREAKQLDDFCATHPQRAQLGERLGVWRQQFEQRVKLNRDLAAQQQAQQ KLEQEIAETARQSATQASAVASAEKAKTTADAALEKTQTEQNLRLAGQTL AELRQHWQGEQAGLNRWQQLEALAQRRRELAVLQTTQATQVQQGEQKIEA QEKALVALREQHKELAAQVADKQKLLEQERRIQSLETHRRQLQPGEACPL CGAHEHPAIADYAALDVSATETALKEKQALLEALVQKGQQAKTEQAATQA TQKEWLAQQAKTTQEIARAQAEWTEFLAGLSSETPLATDAWQEAQTLASA RNAAEQALAKLADRLKAADQGEQALNAARKTATEAAQTLLNASNQLKLLQ QTAQTTQLRQTELAKAAQTLTQERAELDSKLAATLTDAGYETPDEPTIWL QERDGEWLHWQQTQKRRHELAEILIKQQDRFDAAQTQAAQWLERWKTQAA KRPVAEQEPRPDEATDDPAAALTRSAETIADLTQQLAAQQGRQTQLETNV TQQKKAVDEASTAWQTALAASPFADLAAYAAALLPTDERQRLQQLKEARQ LAKQQAEAVLKAAGEKLLRLQTTPPPQDSAESPIPPLAELEAALAQLETS RRELSEQLGAQRALLTRDEQARQSQQALFKDIAAQTAESDLWQRLDSLIG SARGDKFRKFAQGLTLDHLLHLANSHLARLHGRYLLRRKTTGELELDIVD SWQGEVARDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEGFGT LDADTLEIALNALDTLNASGKMIGVISHVEGMKERIPAQIRVEKGGGVGY SRLRI >Daro_1675 Phage integrase MARQIGKLTALQVTKLTKPGLYGDGGGLTLQITSRSSKSWLFRFMKDGKS YGMGLGPTHTVSLAEARQKALDARKLLTEGINPLTAKKERAIAEQLTRAR TISFDQCAEAYINAHKASWKNAKHADQWTNTLNTYASPIFGKLPVAEVDT PLVVKCLSAIWQTKTETATRVRGRIESVLDWATTSGYRSGENPARWKGHL ENLLATISKTSRTKHHASLPWQQVATFMSDLKSREGTAARALELVILTAC RSGEVRGAKWSEFDRKNKIWTIPAERMKAKREHEVPLSAQALELLKRLPE DGELLFPGTKEQPLSDMSLTAVIRRMNGDETQKWTSPDGEVITVHGFRAT FRMWAAETTNYPREVAEHALAHQLPDAVERAYQRGTQFAKRIALMSDWGQ QCKKKPSAEKGLWTITSLP >Daro_1217 primosomal replication protein N MRYTPAGVPVSEGRLQHSSSQIESGAERLVELEIAVLALGENARWLQAAP LGGAVKVTGFLAAKSLNSRTPVLHVNTLEYLEGNENGSILQEEG
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|