Gene list
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COG category: Replication, recombination and repair
Organism: Dechloromonas aromatica RCB, RCB
Number of genes found: 191
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Dechloromonas aromatica RCB, RCB | |||||||||
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Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | Daro_1654 | Transposase IS3/IS911 | SubName: Full=Transposase IS3/IS911; | chromosome | CDS | 1778969 | 303 | - | 0.587459 |
NA | Daro_0559 | DNA polymerase III, alpha subunit | SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; | chromosome | CDS | 619858 | 3471 | + | 0.617689 |
NA | Daro_2240 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2423317 | 561 | - | 0.56328 |
NA | Daro_0483 | Single-strand binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 545859 | 471 | + | 0.613588 |
NA | Daro_3892 | Holliday junction resolvase YqgF | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 4183231 | 441 | - | 0.582766 |
NA | Daro_2564 | Protein of unknown function DUF1173 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2763112 | 1209 | - | 0.631927 |
NA | Daro_0820 | Protein kinase:Protein phosphatase 2C-like | SubName: Full=Serine/threonine protein kinase; | chromosome | CDS | 890816 | 1725 | + | 0.575652 |
NA | Daro_1305 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 1417170 | 828 | - | 0.582126 |
NA | Daro_1657 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1781164 | 1029 | + | 0.596696 |
NA | Daro_3164 | DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 3400423 | 1848 | + | 0.655303 |
NA | Daro_0806 | AAA ATPase, central region | SubName: Full=AAA ATPase, central region; | chromosome | CDS | 875969 | 1614 | + | 0.551425 |
NA | Daro_2498 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 2698059 | 1269 | + | 0.542159 |
NA | Daro_0788 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 856014 | 1380 | + | 0.536232 |
NA | Daro_1920 | Exonuclease SbcD | SubName: Full=Exodeoxyribonuclease I subunit D; EC=3.1.11.1; | chromosome | CDS | 2063927 | 1245 | - | 0.66506 |
NA | Daro_0546 | UvrD/REP helicase | SubName: Full=ATP-dependent DNA helicase UvrD; EC=3.6.1.-; | chromosome | CDS | 604793 | 2142 | + | 0.609244 |
NA | Daro_0282 | Putative RNA methylase:THUMP | SubName: Full=Putative RNA methylase:THUMP; | chromosome | CDS | 325585 | 1143 | + | 0.607174 |
NA | Daro_3959 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 4255760 | 1161 | + | 0.562446 |
NA | Daro_1675 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 1800686 | 1260 | - | 0.54127 |
NA | Daro_1592 | DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit | SubName: Full=DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit; | chromosome | CDS | 1708387 | 717 | - | 0.60251 |
NA | Daro_0925 | Cyclic nucleotide-binding:Protein kinase | SubName: Full=Cyclic nucleotide-binding:Protein kinase; | chromosome | CDS | 1002879 | 1365 | + | 0.578755 |
NA | Daro_1324 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 1441002 | 1236 | + | 0.542071 |
NA | Daro_3653 | ATPas | SubName: Full=ATPase; | chromosome | CDS | 3925937 | 1464 | - | 0.422814 |
NA | Daro_2037 | Uracil-DNA glycosylase superfamily | SubName: Full=Uracil-DNA glycosylase superfamily; | chromosome | CDS | 2187567 | 648 | + | 0.587963 |
NA | Daro_3523 | Resolvase, N-terminal:Resolvase helix-turn-helix region | SubName: Full=Resolvase, N-terminal:Resolvase helix-turn-helix region; | chromosome | CDS | 3773077 | 555 | - | 0.585586 |
NA | Daro_0537 | Tyrosine recombinase XerD | RecName: Full=Tyrosine recombinase XerD; | chromosome | CDS | 595374 | 909 | - | 0.652365 |
NA | Daro_2250 | RNA-directed DNA polymerase (Reverse transcriptase) | SubName: Full=RNA-directed DNA polymerase (Reverse transcriptase); | chromosome | CDS | 2433628 | 1290 | - | 0.568217 |
NA | Daro_2472 | Excinuclease ABC, C subunit, N-terminal | SubName: Full=Excinuclease ABC, C subunit, N-terminal; | chromosome | CDS | 2671550 | 261 | + | 0.613027 |
NA | Daro_2425 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 2619121 | 831 | + | 0.578821 |
NA | Daro_1395 | Nitrogen fixation protein NifW | RecName: Full=Nitrogenase-stabilizing/protective protein NifW; | chromosome | CDS | 1524303 | 342 | - | 0.593567 |
NA | Daro_3310 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal | SubName: Full=Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; | chromosome | CDS | 3560036 | 1524 | + | 0.633202 |
NA | Daro_3211 | Exonuclease VII, large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; | chromosome | CDS | 3461459 | 1353 | + | 0.622321 |
NA | Daro_2163 | hypothetical protein | SubName: Full=Uncharacterized protein; Flags: Precursor; | chromosome | CDS | 2335809 | 633 | - | 0.480253 |
NA | Daro_0473 | Excinuclease ABC, A subunit | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 531202 | 2826 | - | 0.624204 |
NA | Daro_2671 | Integration host factor, alpha subunit | RecName: Full=Integration host factor subunit alpha 2; Short=IHF-alpha 2; | chromosome | CDS | 2867663 | 303 | - | 0.49505 |
NA | Daro_3879 | UvrD/REP helicase | SubName: Full=ATP-dependent DNA helicase Rep; EC=3.6.1.-; | chromosome | CDS | 4172324 | 1992 | - | 0.581325 |
NA | Daro_2196 | DNA polymerase III delta prime subunit | SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7; | chromosome | CDS | 2371760 | 1020 | - | 0.543137 |
NA | Daro_4060 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 4357856 | 1077 | - | 0.627669 |
NA | Daro_0467 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 520761 | 2739 | + | 0.654984 |
NA | Daro_0802 | Resolvase, N-terminal | SubName: Full=Resolvase, N-terminal; | chromosome | CDS | 867012 | 690 | - | 0.575362 |
NA | Daro_1907 | DNA polymerase III, epsilon subunit | SubName: Full=DNA polymerase III, epsilon subunit; | chromosome | CDS | 2049139 | 1362 | - | 0.617474 |
NA | Daro_2546 | Helicase, C-terminal | SubName: Full=Helicase, C-terminal; | chromosome | CDS | 2740380 | 5010 | + | 0.639321 |
NA | Daro_1711 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 1839162 | 828 | - | 0.582126 |
NA | Daro_1756 | Ribonuclease HII/HIII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 1887042 | 591 | + | 0.614213 |
NA | Daro_1887 | DNA-3-methyladenine glycosylase I | SubName: Full=DNA-3-methyladenine glycosylase I; EC=3.2.2.20; | chromosome | CDS | 2027454 | 591 | + | 0.610829 |
NA | Daro_2742 | DNA alkylation repair enzyme | SubName: Full=DNA-7-methylguanine glycosylase; EC=3.2.2.-; | chromosome | CDS | 2935139 | 654 | + | 0.565749 |
NA | Daro_1235 | ATP dependent DNA ligase, central | SubName: Full=ATP dependent DNA ligase, central; Flags: Precursor; | chromosome | CDS | 1341669 | 840 | + | 0.602381 |
NA | Daro_2284 | Transposase IS3/IS911 | SubName: Full=Transposase IS3/IS911; | chromosome | CDS | 2468228 | 303 | + | 0.587459 |
NA | Daro_3822 | RNA-directed DNA polymerase (Reverse transcriptase) | SubName: Full=RNA-directed DNA polymerase (Reverse transcriptase); | chromosome | CDS | 4107965 | 1290 | - | 0.568217 |
NA | Daro_1118 | Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 1220106 | 1821 | - | 0.632619 |
NA | Daro_3677 | Ribonuclease H | SubName: Full=Ribonuclease H; | chromosome | CDS | 3953143 | 492 | + | 0.609756 |
NA | Daro_3434 | Transposase IS116/IS110/IS902 | SubName: Full=Transposase IS116/IS110/IS902; | chromosome | CDS | 3686041 | 1026 | - | 0.619883 |
NA | Daro_1297 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1407666 | 579 | - | 0.654577 |
NA | Daro_0064 | A/G-specific adenine glycosylase MutY | SubName: Full=A/G-specific DNA-adenine glycosylase; EC=3.2.2.-; | chromosome | CDS | 74598 | 1038 | - | 0.602119 |
NA | Daro_1384 | Ribonuclease H | SubName: Full=Ribonuclease H; | chromosome | CDS | 1515702 | 651 | + | 0.537634 |
NA | Daro_0801 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 866183 | 702 | - | 0.52849 |
NA | Daro_3526 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 3776475 | 1680 | - | 0.534524 |
NA | Daro_1942 | DNA polymerase III, alpha subunit | RecName: Full=Error-prone DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 2090875 | 3084 | + | 0.613165 |
NA | Daro_2704 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 2896523 | 1215 | - | 0.548148 |
NA | Daro_2223 | Transposase, IS4 | SubName: Full=Transposase, IS4 family; | chromosome | CDS | 2406023 | 1170 | - | 0.559829 |
NA | Daro_1281 | Integration host factor, beta subunit | RecName: Full=Integration host factor subunit beta; Short=IHF-beta; | chromosome | CDS | 1392710 | 285 | + | 0.561404 |
NA | Daro_3849 | Protein kinase | SubName: Full=Serine/threonine protein kinase; | chromosome | CDS | 4142869 | 945 | + | 0.589418 |
NA | Daro_3888 | Competence protein ComEA helix-hairpin-helix region | SubName: Full=Competence protein ComEA helix-hairpin-helix region; Flags: Precursor; | chromosome | CDS | 4180148 | 318 | - | 0.528302 |
NA | Daro_1129 | Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal | SubName: Full=ATP-dependent RNA helicase DbpA; EC=5.99.1.-; | chromosome | CDS | 1235629 | 1401 | + | 0.610992 |
NA | Daro_3894 | DNA photolyase, FAD-binding:DNA photolyase, N-terminal | SubName: Full=Deoxyribodipyrimidine photo-lyase type I; EC=4.1.99.3; | chromosome | CDS | 4184272 | 1413 | + | 0.595895 |
NA | Daro_2555 | DNA repair protein RadC | SubName: Full=DNA repair protein RadC; | chromosome | CDS | 2752047 | 582 | + | 0.608247 |
NA | Daro_0003 | DNA gyrase, B subunit | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 2938 | 2505 | + | 0.59481 |
NA | Daro_3666 | Helix-turn-helix, Fis-type | SubName: Full=Helix-turn-helix, Fis-type; | chromosome | CDS | 3940789 | 234 | + | 0.564103 |
NA | Daro_4062 | DNA recombination protein, RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 4359987 | 579 | - | 0.613126 |
NA | Daro_1298 | AAA ATPase, central region | SubName: Full=Recombination protein MgsA; | chromosome | CDS | 1408462 | 1314 | + | 0.621005 |
NA | Daro_1288 | propable PolB | SubName: Full=Propable PolB; | chromosome | CDS | 1398686 | 786 | + | 0.590331 |
NA | Daro_1965 | Transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 2111293 | 3444 | - | 0.646922 |
NA | Daro_3180 | conserved hypothetical protein | SubName: Full=Regulatory inactivation of DnaA Hda protein; | chromosome | CDS | 3419484 | 693 | + | 0.637807 |
NA | Daro_1872 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2012355 | 573 | - | 0.619546 |
NA | Daro_1850 | Gram negative topoisomerase IV, subunit A | RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; | chromosome | CDS | 1985806 | 2418 | - | 0.644334 |
NA | Daro_3325 | Radical SAM | SubName: Full=Radical SAM; | chromosome | CDS | 3575387 | 1107 | + | 0.623306 |
NA | Daro_0538 | Methylated-DNA-(protein)-cysteineS-methyltransfe rase | SubName: Full=Methylated-DNA-(Protein)-cysteine S-methyltransferase; | chromosome | CDS | 596260 | 489 | - | 0.635992 |
NA | Daro_1941 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2089423 | 1440 | + | 0.626389 |
NA | Daro_1037 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 1137870 | 1017 | - | 0.564405 |
NA | Daro_0002 | DNA polymerase III, beta chain | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 1758 | 1107 | + | 0.568202 |
NA | Daro_0808 | RecR protein | RecName: Full=Recombination protein RecR; | chromosome | CDS | 877924 | 600 | + | 0.555 |
NA | Daro_2290 | ATP-binding region, ATPase-like | SubName: Full=ATP-binding region, ATPase-like protein; | chromosome | CDS | 2472242 | 1641 | + | 0.631932 |
NA | Daro_3841 | TatD-related deoxyribonuclease | SubName: Full=TatD-related deoxyribonuclease; | chromosome | CDS | 4132692 | 762 | - | 0.616798 |
NA | Daro_2285 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 2468527 | 828 | + | 0.582126 |
NA | Daro_2231 | DNA repair protein RadC | SubName: Full=DNA repair protein RadC; | chromosome | CDS | 2411796 | 582 | + | 0.639175 |
NA | Daro_1940 | conserved hypothetical protein | SubName: Full=SOS cell division inhibitor SulA; | chromosome | CDS | 2088768 | 723 | + | 0.666667 |
NA | Daro_3722 | Conserved hypothetical protein 95 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4001245 | 555 | + | 0.589189 |
NA | Daro_1372 | Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902 | SubName: Full=Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902; | chromosome | CDS | 1497350 | 1026 | + | 0.622807 |
NA | Daro_1854 | Protein kinase:Leucine-rich repeat | SubName: Full=Serine/threonine protein kinase; | chromosome | CDS | 1993479 | 1323 | + | 0.621315 |
NA | Daro_1217 | primosomal replication protein N | SubName: Full=Primosomal replication protein N; | chromosome | CDS | 1322134 | 285 | + | 0.561404 |
NA | Daro_2208 | TatD-related deoxyribonuclease | SubName: Full=TatD-related deoxyribonuclease; | chromosome | CDS | 2384185 | 804 | - | 0.59204 |
NA | Daro_1715 | Histone-like bacterial DNA-binding protein | SubName: Full=Histone-like bacterial DNA-binding protein; | chromosome | CDS | 1842240 | 273 | - | 0.619048 |
NA | Daro_3512 | Histone-like bacterial DNA-binding protein | SubName: Full=Histone-like bacterial DNA-binding protein; | chromosome | CDS | 3762365 | 300 | - | 0.536667 |
NA | Daro_0932 | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 1010656 | 1674 | + | 0.610514 |
NA | Daro_0356 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; | chromosome | CDS | 387480 | 2052 | + | 0.627193 |
NA | Daro_2500 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2700350 | 957 | - | 0.507837 |
NA | Daro_0466 | Competence protein ComEA helix-hairpin-helix region | SubName: Full=Competence protein ComEA helix-hairpin-helix region; | chromosome | CDS | 519936 | 798 | + | 0.655388 |
NA | Daro_0631 | NUDIX hydrolase | SubName: Full=Dihydroneopterin triphosphate pyrophosphatase; | chromosome | CDS | 695011 | 453 | - | 0.584989 |
NA | Daro_0843 | HhH-GPD | SubName: Full=DNA-3-methyladenine glycosylase II; EC=3.2.2.21; | chromosome | CDS | 917009 | 618 | + | 0.587379 |
NA | Daro_1433 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 1558453 | 1161 | + | 0.562446 |
NA | Daro_1983 | Phage SPO1 DNA polymerase-related protein | SubName: Full=Phage SPO1 DNA polymerase-related protein; | chromosome | CDS | 2132046 | 783 | + | 0.62069 |
NA | Daro_3449 | N6 adenine-specific DNA methyltransferase, N12 class | SubName: Full=N6 adenine-specific DNA methyltransferase, N12 class; | chromosome | CDS | 3699180 | 1170 | + | 0.582906 |
NA | Daro_3142 | DNA repair protein RadC | RecName: Full=UPF0758 protein Daro_3142; | chromosome | CDS | 3383580 | 681 | + | 0.602056 |
NA | Daro_0163 | DNA polymerase A | SubName: Full=DNA polymerase A; | chromosome | CDS | 178647 | 2721 | - | 0.636898 |
NA | Daro_0001 | chromosomal replication initiator protein, DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 151 | 1398 | + | 0.54578 |
NA | Daro_3525 | C-5 cytosine-specific DNA methylase | RecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; | chromosome | CDS | 3774763 | 1716 | - | 0.498834 |
NA | Daro_3858 | Putative exonuclease, RdgC | RecName: Full=Recombination-associated protein RdgC; | chromosome | CDS | 4150720 | 915 | - | 0.608743 |
NA | Daro_1155 | Endonuclease III/Nth | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 1259690 | 633 | - | 0.598736 |
NA | Daro_2031 | Recombination protein O, RecO | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome | CDS | 2182939 | 729 | + | 0.539095 |
NA | Daro_3870 | SNF2-related:Helicase, C-terminal:SWIM Zn-finger | SubName: Full=SNF2-related:Helicase, C-terminal:SWIM Zn-finger; | chromosome | CDS | 4161946 | 3276 | + | 0.635531 |
NA | Daro_0913 | ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase RecQ; EC=3.6.1.-; | chromosome | CDS | 988567 | 1854 | - | 0.639159 |
NA | Daro_2560 | UvrD/REP helicase | SubName: Full=UvrD/REP helicase; | chromosome | CDS | 2758299 | 1662 | + | 0.584236 |
NA | Daro_1779 | Helicase c2:DEAD/DEAH box helicase, N-terminal | SubName: Full=Helicase c2:DEAD/DEAH box helicase, N-terminal; | chromosome | CDS | 1918614 | 1926 | + | 0.629283 |
NA | Daro_1820 | Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal | SubName: Full=Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal; Flags: Precursor; | chromosome | CDS | 1956783 | 1344 | - | 0.65625 |
NA | Daro_1653 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 1778145 | 828 | - | 0.582126 |
NA | Daro_0645 | NUDIX hydrolase | RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome | CDS | 708869 | 549 | + | 0.544627 |
NA | Daro_0018 | DNA topoisomerase III | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | chromosome | CDS | 22231 | 2547 | - | 0.606989 |
NA | Daro_2531 | Phage integrase, N-terminal SAM-like | SubName: Full=Phage integrase, N-terminal SAM-like protein; | chromosome | CDS | 2728302 | 1200 | + | 0.625 |
NA | Daro_3648 | AP endonuclease, family 1:Exodeoxyribonuclease III xth | SubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; | chromosome | CDS | 3921795 | 765 | + | 0.622222 |
NA | Daro_3427 | Integron integrase | SubName: Full=Integron integrase; | chromosome | CDS | 3680916 | 984 | - | 0.583333 |
NA | Daro_0527 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 588141 | 1737 | - | 0.63673 |
NA | Daro_0468 | UvrD/REP helicase | SubName: Full=UvrD/REP helicase; | chromosome | CDS | 523503 | 3405 | + | 0.656975 |
NA | Daro_1867 | Gram negative topoisomerase IV, subunit B | RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; | chromosome | CDS | 2005726 | 1989 | - | 0.613374 |
NA | Daro_3293 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 3543748 | 456 | - | 0.614035 |
NA | Daro_0438 | Protein kinase | SubName: Full=Protein kinase; | chromosome | CDS | 480379 | 1374 | + | 0.59607 |
NA | Daro_0826 | Protein kinase:Protein phosphatase 2C-like | SubName: Full=Protein kinase:Protein phosphatase 2C-like protein; | chromosome | CDS | 897130 | 1689 | + | 0.640024 |
NA | Daro_2695 | Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal | SubName: Full=Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal; | chromosome | CDS | 2890657 | 1515 | - | 0.547855 |
NA | Daro_2559 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2756365 | 1938 | + | 0.579463 |
NA | Daro_3867 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4158140 | 531 | - | 0.589454 |
NA | Daro_1919 | SMC protein, N-terminal | SubName: Full=SMC protein, N-terminal; | chromosome | CDS | 2060463 | 3468 | - | 0.638697 |
NA | Daro_2336 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 2517136 | 1281 | - | 0.569087 |
NA | Daro_1734 | NAD-dependent DNA ligase | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 1864080 | 2052 | + | 0.623294 |
NA | Daro_2499 | Resolvase, N-terminal | SubName: Full=Resolvase, N-terminal; | chromosome | CDS | 2699585 | 690 | + | 0.569565 |
NA | Daro_1648 | Histone-like bacterial DNA-binding protein | SubName: Full=Histone-like bacterial DNA-binding protein; | chromosome | CDS | 1775166 | 222 | - | 0.585586 |
NA | Daro_2041 | Transposase IS116/IS110/IS902 | SubName: Full=Transposase IS116/IS110/IS902; | chromosome | CDS | 2192900 | 1026 | - | 0.621832 |
NA | Daro_3726 | Formamidopyrimidine-DNA glycolase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome | CDS | 4004645 | 834 | - | 0.621103 |
NA | Daro_1230 | DNA gyrase, subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 1334876 | 2640 | + | 0.600379 |
NA | Daro_2330 | TraH | SubName: Full=TraH; Flags: Precursor; | chromosome | CDS | 2509645 | 1449 | + | 0.596963 |
NA | Daro_0194 | Tyrosine recombinase XerC | RecName: Full=Tyrosine recombinase XerC; | chromosome | CDS | 211440 | 888 | + | 0.627252 |
NA | Daro_1500 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1615953 | 1113 | + | 0.609164 |
NA | Daro_2347 | MutS 1 protein | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 2527689 | 2583 | + | 0.635308 |
NA | Daro_1593 | Ribonuclease H | RecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; | chromosome | CDS | 1709113 | 447 | - | 0.568233 |
NA | Daro_3426 | ATP-dependent helicase HrpA | SubName: Full=ATP-dependent helicase HrpA; | chromosome | CDS | 3676949 | 3990 | - | 0.62807 |
NA | Daro_0463 | probable site-specific recombinase | SubName: Full=Probable site-specific recombinase; | chromosome | CDS | 514819 | 2061 | - | 0.646288 |
NA | Daro_0503 | Protein of unknown function UPF0102 | RecName: Full=UPF0102 protein Daro_0503; | chromosome | CDS | 563505 | 363 | - | 0.647383 |
NA | Daro_1381 | DNA polymerase III, epsilon subunit | SubName: Full=DNA polymerase III, epsilon subunit; | chromosome | CDS | 1513632 | 615 | + | 0.57561 |
NA | Daro_2038 | Excinuclease ABC, C subunit | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 2188218 | 1812 | + | 0.566777 |
NA | Daro_0878 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal | SubName: Full=Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; | chromosome | CDS | 950826 | 1278 | + | 0.624413 |
NA | Daro_2563 | Histone-like bacterial DNA-binding protein | SubName: Full=Histone-like bacterial DNA-binding protein; | chromosome | CDS | 2762774 | 381 | + | 0.569554 |
NA | Daro_0542 | DNA polymerase III, delta subunit | SubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; | chromosome | CDS | 599624 | 1008 | - | 0.627976 |
NA | Daro_2838 | RecJ exonuclease | SubName: Full=Exonuclease RecJ; EC=3.1.-.-; | chromosome | CDS | 3048867 | 1701 | + | 0.63786 |
NA | Daro_2123 | UMUC-like DNA-repair protein | RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; | chromosome | CDS | 2293819 | 1164 | + | 0.574742 |
NA | Daro_0690 | RNA-directed DNA polymerase (Reverse transcriptase) | SubName: Full=RNA-directed DNA polymerase (Reverse transcriptase); | chromosome | CDS | 760413 | 1290 | + | 0.568217 |
NA | Daro_2385 | Rhomboid-like protein | SubName: Full=Rhomboid-like protein; | chromosome | CDS | 2570383 | 1077 | - | 0.570102 |
NA | Daro_2194 | TatD-related deoxyribonuclease | SubName: Full=TatD-related deoxyribonuclease; | chromosome | CDS | 2370608 | 774 | - | 0.550388 |
NA | Daro_2694 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2889738 | 930 | - | 0.569892 |
NA | Daro_1633 | DNA polymerase III, epsilon subunit | SubName: Full=DNA polymerase III, epsilon subunit; Flags: Precursor; | chromosome | CDS | 1754660 | 2166 | + | 0.584488 |
NA | Daro_2003 | Excinuclease ABC, B subunit | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 2157469 | 2073 | + | 0.553787 |
NA | Daro_1108 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1210765 | 1782 | - | 0.621773 |
NA | Daro_2971 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3207981 | 867 | + | 0.619377 |
NA | Daro_2663 | TraH | SubName: Full=TraH; Flags: Precursor; | chromosome | CDS | 2856967 | 1449 | + | 0.599034 |
NA | Daro_2424 | Transposase IS3/IS911 | SubName: Full=Transposase IS3/IS911; | chromosome | CDS | 2618825 | 270 | + | 0.533333 |
NA | Daro_4063 | Crossover junction endodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 4360615 | 540 | - | 0.637037 |
NA | Daro_2526 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 2722914 | 1446 | + | 0.547026 |
NA | Daro_1602 | Protein kinase:GAF | SubName: Full=Protein kinase:GAF; | chromosome | CDS | 1718068 | 2373 | + | 0.567636 |
NA | Daro_3024 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 3270210 | 597 | - | 0.58124 |
NA | Daro_2573 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2771125 | 1011 | + | 0.623145 |
NA | Daro_3083 | DNA polymerase III chi subunit, HolC | SubName: Full=DNA polymerase III chi subunit, HolC; | chromosome | CDS | 3323300 | 423 | + | 0.576832 |
NA | Daro_1302 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 1413492 | 1698 | + | 0.530035 |
NA | Daro_0019 | SMF protein | SubName: Full=DNA protecting protein DprA; | chromosome | CDS | 24827 | 1077 | - | 0.61467 |
NA | Daro_2558 | putative ATPase involved in DNA repair | SubName: Full=Putative ATPase involved in DNA repair; | chromosome | CDS | 2753754 | 2457 | - | 0.619048 |
NA | Daro_2489 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2686838 | 405 | + | 0.548148 |
NA | Daro_1712 | Transposase IS3/IS911 | SubName: Full=Transposase IS3/IS911; | chromosome | CDS | 1839986 | 303 | - | 0.587459 |
NA | Daro_2221 | Helicase, C-terminal | SubName: Full=Helicase, C-terminal; | chromosome | CDS | 2399873 | 5010 | + | 0.659281 |
NA | Daro_1306 | Transposase IS3/IS911 | SubName: Full=Transposase IS3/IS911; | chromosome | CDS | 1417994 | 303 | - | 0.587459 |
NA | Daro_1312 | Resolvase, N-terminal:Resolvase helix-turn-helix region | SubName: Full=Resolvase, N-terminal:Resolvase helix-turn-helix region; | chromosome | CDS | 1426631 | 564 | - | 0.572695 |
NA | Daro_3824 | Transposase, IS4 | SubName: Full=Transposase, IS4 family; | chromosome | CDS | 4110880 | 1482 | - | 0.574899 |
NA | Daro_2218 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2395071 | 1212 | + | 0.668317 |
NA | Daro_0963 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 1043993 | 543 | + | 0.53407 |
NA | Daro_1636 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1759881 | 666 | + | 0.593093 |
NA | Daro_2108 | Transposase, IS4 | SubName: Full=Transposase, IS4 family; | chromosome | CDS | 2276887 | 1482 | - | 0.573549 |
NA | Daro_1074 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 1177982 | 786 | - | 0.629771 |
NA | Daro_1659 | Histone-like bacterial DNA-binding protein | SubName: Full=Histone-like bacterial DNA-binding protein; | chromosome | CDS | 1783339 | 285 | + | 0.607018 |
NA | Daro_1327 | Integration host factor, alpha subunit | RecName: Full=Integration host factor subunit alpha 1; Short=IHF-alpha 1; | chromosome | CDS | 1443950 | 342 | - | 0.535088 |
NA | Daro_2237 | putative ATPase involved in DNA repair | SubName: Full=Putative ATPase involved in DNA repair; | chromosome | CDS | 2417940 | 2463 | - | 0.671133 |
NA | Daro_0033 | Primosomal protein n | SubName: Full=Replication restart DNA helicase PriA; | chromosome | CDS | 38532 | 2001 | + | 0.632184 |
NA | Daro_3652 | Resolvase, N-terminal | SubName: Full=Resolvase, N-terminal; | chromosome | CDS | 3925341 | 579 | + | 0.604491 |
NA | Daro_3059 | Exonuclease VII, small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome | CDS | 3302530 | 240 | + | 0.604167 |
NA | Daro_0123 | AP endonuclease, family 1:Exodeoxyribonuclease III xth | SubName: Full=AP endonuclease, family 1:Exodeoxyribonuclease III xth; | chromosome | CDS | 139128 | 780 | + | 0.551282 |
NA | Daro_4152 | RecA bacterial DNA recombination protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 4450786 | 1032 | - | 0.594961 |
NA | Daro_3654 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 3927660 | 1023 | - | 0.588465 |
NA | Daro_1220 | DnaB helicase | SubName: Full=Primary replicative DNA helicase; EC=3.6.1.-; | chromosome | CDS | 1323197 | 1410 | + | 0.58156 |