Gene list
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COG category: Replication, recombination and repair
Organism: Colwellia psychrerythraea 34H, 34H; BAA-681
Gene type: CDS
Number of genes found: 198
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# Colwellia psychrerythraea 34H, 34H; BAA-681 >CPS_0887 putative phage replication initiation protein MKTKPTTIPCLVDALSLTWSPKELLNIKQMAKIGACIKSELIVKAKDAAL NRELAKLENTKNKELLGTNAFNAHEYEAILSRYKESCSTITREYNNRRHK DLPLKSLALSDNEVSARYELRDMLKGELEVDTGIKYGDRLNNLLDNIGVD LLDVLCCGEVERFVCRLNNVFTQETFIWTVKNNPTGRFNYSYSATLYADG EQAGVICWGGKNLGCYVSFMGTGCNALDMKRLYEEIKNIPALKITRIDLA HDDYAGKHSIKRALSKAKKGLFNSGGRPACYMYVESGHLTEKMLKENFKD LKEISNESTKSTAKKTFGFIPSKGKTLYIGSRESGKLLRIYEKGKQLGDM KSKWVRWEVELHSSQRVIPLDAMVKPSEYLAATYPALNFLSVEQCKIKTL VKQATMTIEKIVENQVISTRKAINMMRVICGLSDSEIVEKFVKDIEEPDC RSSMPKRLKASVIEEWVLQQQAQTAAA >CPS_3336 conserved hypothetical protein MSSESSKLLVGIHLRTLIDKKWLAKAYRRSGLKSIIKVHTQVHDKSTGKD TAETRWNISSLDLHVVQALNAVRSHWQVESIHWMLDMTFRVDESRICRKQ GPHVFNVMRKIAMTLFKQDTTKLVSMARKKKMAGLDDDYRSNLLESGIKM R >CPS_0354 site-specific recombinase, phage integrase family MASVTIDKRQKANGDFSYRCTVRVKKNGAIIHRESRTFSKKELANTWGRI RKDDIELNSIILQEKKISIAELIDLYINDADLWGNTGRTKRYVIDMLRDS PIASVLANELKTSDLISHCRMRRDAGAGGATVYHDIAYLRSIMKKALPVF DVKANWKIFEDAVPVLIDMKLVGKSQKRTRRPTENELERLIEALTERQKQ QSSKIPFVDILNFSILTCMRIGEVCKIKWEDLNHEHKTVIVRDRKDPRKK EGNHMIVPLLAGSYDIVKKQLETDERIFPYASASVSAGFQRVRNTLGITD LRYHDLRREGASRLFEKGYSIEEVAQVTGHRNLNILWQVYTQLFPHKLHD KFAEE >CPS_1489 conserved hypothetical protein MSRTNLTKGRTSLKHHIYHVITCTKNRQPFFNDFECARFLINEMTNLVEQ KEINSITWVIMPDHLHWLFELTSDNHLSKVIQTLKGRSARLINQHDEGQR FAWQRGFYDHAIRTEESLLSVSRYIVANPLRAGLVDNVGDYSLWDSVYLH ENE >CPS_0787 transposase, IS110 family, truncated MVPRQFSTGGKPRLFGISKRGNKGIRELFIHGARAVLVRLEKAVAIFGNW ILELLSRKPYNVAVVTLTNKLARIAWSVLSTKQAFEVRMQT >CPS_2243 ATP-dependent helicase HrpA MSVSIKSVITSFSHLQKLFELLPQAKKSDAVRFRKRLINLKKTITKEVGQ KSPTELAMLSLSEKHIKLVEPLQQHILRSIQDKQQKIRSLPKITYPEGLP ISENAAQISAAIDANQVVIIAGETGSGKTTQIPKICLELGRGVDGLIGHT QPRRIAARTVANRIAEELGTKLGEQVGYKVRFNDQVSEQSYIKLMTDGIL LAEMQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKRPDLKLIIT SATIDPQRFAKHFSSKNGLPAPIIEVSGRTFPVEMRYRPLNDRAVIDDDD QSPQEVDIISGILSAVDELSDCGNGDILVFLNGEREIRDTAAALVKANLR HTNVLPLYARLTVSEQNQIFKPHSGRNIVLATNVAETSLTVPGIKYVIDP GTARISRYSYRTKVQRLPIEPVSQASANQRSGRCGRVSEGICIRLYSEDD YKSRAEFTDPEILRTNLATVILQMHALDLGDIANFPFVEAPDNRNITDGV RLLEEIAAVESIENADKNAKGKASSTATQLTKSGRLLAKFPIDPRLAKMV VSSIEFGCIEQILIIVSALSIQDPRERPHEKQQLSDEKHNRFKDKSSDFI SLLNLWQYINEQKKDLTQNQFRKLCQREFLSYVRLREWQDIFSQLKLTLK EQQITLTSIDYQFSMPNVQQGQAASTAVDKTKETEQDSALTPVHQALLSG LLSHIGQQDENREYKGARGMKFFIFPGSALTKKSPKWLMSAELVETSRLF ARMNAKIDPLWLEPLAQHLVKRNYSEPHWEKKQGAVMAFEQVTLYGLSIV SKRKINFNVIEPVTCREIFIREALVNGDCVIKEKFLSKNQQLVESIEELE QKARRRDFLIDEQHLVDFYSDKLPDTVNCQRSFLAWWKKAKRENEQLLDF SKAFLLNESSDELSTIEYPDVWQQDSITLPLTYHFSPGDIDDGISVVLPI ALLNQVQEVGFDWLIPALRDELAIALIKALPKTLRRNFVPAPNYAQACLA AMPAEQGHLQDALAKQLLRMTGVRLPEDAWQDITLPIHLTMNFQVVDDKG KLIKQGRDLNELKAELQGKVKASIKQVAEKGIEQADLTKWDFGSLPKGYE KKVANITIKAFPALVDHKNSVAIELFEQEQHAQEAMLKGISRLILLNIPT PLKYLQEKLPNKAKLGLYFNPFGSINELLQDCIQGACLSLVQQFSQHQNN GLLPREEKQFAKCCDYVRAEIADCVLTAAIKVERALTLRHEVTKKMKGSV PLNVIQSHGDIKQQCEQLVFKGFVTYSGLSKLDDIIRYLQGMLRRLEKLP SDPNQDRLKLIEVSKVNDMYQVIMSKQRKDKPVDNELLATRWLIEELRIS LFAQNLGTSAPISVKRILNYLKGFS >CPS_0377 ISCps1, transposase MNKVNTIGVDLAKNVIQVSVLSPLNKELTNKELPRTKFAEFLAKQPISLV AFEACSTAHHWARLARSYGHRVKILPAKVVSSFRQGHKTDKNDALAVAEA ANRPNVKEAPLKELEQQGMQSIQRSRELLVQNKTCLSNHIRGLLMEFGVF IPKGFASLFKNIPDILEDGENDIPDMFRATLNLMYQRLLDLRDDVGLLDE QVKQLVKNNEACSNLTKMEGVGPISAILLFSTLGTGDAFKNGREFSAYIG LTPKQHSSGGKASLMGISKFVANKRLRSVLIQGARSYVHRMKSVTTKKDE WLVKLIERAGYGKAAVALANKNVRTAWALLTQGTEYRKELIA >CPS_0895 ISCps3, transposase orfA MPKYNNPRRTWKYSNDFKVNAVQLSFVVGVTIKSVAEKLDIHPFMLSRWR KEYREGIIVVDKRKKVAGQSKAKKVLTKEQQLERENKALKEELYILKKWQ RFLAEEHQVDIDSSKNSEPT >CPS_4955 exonuclase MFGWLLGYEAKRKQLLKKAPEGALRDYLSVPLPDINTRIDKVEILAVDFE TTGLNAKQDKLLSVGFLTLKKQQMSLKTSYHQIIKTKAQLEESNVIIHHI TDSQKEQGQALAIVVEALLKALAGKVMLVHFARIERQFLAEACYELYGMA PIFPMIDTLALAKRRLDKRDVAYDPSELRLTNLRNNFQLPEHHAHNALND AIATAELFMAQMSKANKDGKTTLKDVLL >CPS_2959 ISCps3, transposase orfA MPKYNNPRRTWKYSNDFKVNAVQLSFVVGVTIKSVAEKLDIHPFMLSRWR KEYREGIIVVDKRKKVAGQSKAKKVLTKEQQLERENKALKEELYILKKWQ RFLAEEHQVDIDSSKNSEPT >CPS_1822 hypothetical protein MLIQFKKVRNALIRDGKFGKYCLYAIGEIFLVVTGILIALQVNNYDLAQQ KKAIEHHYLLTIKLQLSADKEKLSAEIYGMNERIDDYLVGMKLINENDQE NLEVLASKVIRLLEYGDFRRQSSVFQTLVYSGEIKYVNSKEIIENLQEIE RTYEITERLENTQANLVMIHAAPAVNKSMDFESGKIIAPDVVFTTMFKNN FSIAIRLAQEKKSEFEHALSVIDNTIKMIDSQINKNEHN >CPS_1804 protein kinase domain protein MSLLYKLFTEYSSLPKELLAQKMTQLHQQNPTVATELSRLLDYRGTSVNE MLEYLHLGIINNEDTSIRIGRLINNKYKITKLLGQGGMSDVYLAERTDGL INHTIAVKYFALADSNNTALKMIKKEAQILADLDHHHIASFIDISHDNHQ EPNIMMEYIDGITLYEFLNTSPSEEAKEQVNTSLKAAIEHAKSKGVEHGD LSKNNVLVDINGNANIVDFDIANFSDSTTNDTQPLCV >CPS_3131 phage SPO1 DNA polymerase-related protein MSDFSTLLNEVRRCTICASQLEHGVRPVLQVHPKAKILIAGQAPGLKVHT SGVPFDDASGKRLREWLGLSREEFYDPEKVAILPMGFCFPGSGKTGDLAP RKECAPAWREKILAHLKQIEVTIVLGSYAQKYHMGLKNASVTDLVKSWET YWPNIIPLPHPSPRNNIWLKKNPWFEIELLPVLRSRIRESLK >CPS_0152 hypothetical protein MVDKSKFSKDVEEQIQSLASDIYIQVEDKLTHLIASAIKTETSKNTDQQN QYLSEKEQSLQKNFTEKQQSQLKEVTQLKQALAEKEADEATNKQNFQVEL TQNTINYSETIESLEKEIVNLKQQKTQQQDKKQSSNNKLDEKLLETEQTL NDKNQEIDGLNGRIMVLTEQEQSLMSQLTVAKEKIQLNEKQHNEALTTVK NQAEATAKQKIDALTEKLQLNEKQHSEALTTIKNQTEATAKQKIDALTEK LQLNEKQQSEAVITIKSQTEATAKQQIDVLTEKLRKLEDDSSRMQAEAMQ SSDSKVKDLEQKISQLAEQAQQEQNGKAELQQQLSAQQKSIDTEQDKNKQ TEQKSQDFQAQIIKLTKQAAIDKQKLLDEIKSINEGSEKIKQQHLDEKEA VNEGAEQVKQRHLDEIKAIHEGAEQVKQQHLDEIKVIHEGADQVKQQHLD EIKVINEGAEQVKQQHLDEIKAIHEGAEQTKQLQASAQQNIIELEKTNEQ LSHKLATEQNDIKLYQQEVTVLNEQVKVAQEGQENILQRFNKNRDKQEIE NNKVRETIKFLRDENHQLISDNGEQKAQFNDQTSELEHKLTEYRLKFEYA QKQLTS >CPS_0137 single-strand binding protein family protein MSLSDAVNKHPKSPNPQLCAVTLLGNLVATPDIRYRANPATAVTEIVLAT SSKWLDKITNKYKEWTSYHHVKVEGELVELALLNANKGDIILLHGYLSNI KPKSTDKSTNHLGIVHANFVQKFEKGYTQAINQIHCSAQLTSKPKLMLTE QNKNITQANIVINQHIYNTDKQAWQTISVERAIHVWGKQAQYLAEHGDIG DELMLEGKLSYTSGVSKDQFIEVKNVHLFKGT >CPS_2417 conserved hypothetical protein MKISFIDIQNFRKLQSCRINLSDKETLLVGANNSGKTSATDVLITFLDQK VKRPFSVTDFTLSNWKPLNEYAMSWTKDIDSIQGTSIEEWQKLCPSIDIW LDASINEVEKVAHLIPTLKWSGEPLGVRLVLQPKNLDELKAHFVSEYTAA NNIKSISPKGTLSLWPRDIKDYLSKGKLNTQFEVKAYILDPEKSNSPQKL RKEQSSMEFYPFDGIFKVDVIEAQRGFSDPNSSEIKQSNGGLSGQLNQYY NRHLNPTDLPDVADLEALETIDNAKELFDIRLNKSFKEALGEIKTLGYPG FNDPDIKLSSRINPIDSLDHDAAIIFDTQKRGFTGLDNFSLPEKYNGLGY KNLIFIVFKLISFRDQWLRKGKAQKRRNADDIAIEPIHLVLIEEPEAHLH AQVQQVFIRKAYDVLRLDVSNKLTTQMIVSSHSSYIAHEAGFEKLRYFKR KPALGLDQVATAEVVDLSTVFKSNSNKTDDVTVTAKFVARYLKTIHCDLF FANGIIMVEGAAERMLIPHFIRTHYNDSLNQNYISILEVGGAHAQRLRPL IDALSLPTLVITDTDATKSKDSNEKIRPEKGKNYGFGSDTLKEWFDLKSK TLDEVVELDEKHKVQGMARAAYQCGIAVNYGEGAKVAEVIPYTFEDALVL SNIELFKSLSNSTGMVKKMHLALGKPTLDECCDQLYTELKGIKAQMALDL LFDVEPKELCIPEYIKEGFEWLEKELKNNALDFIEAKVNTAVEDKAVG >CPS_1157 MutT/NUDIX family protein MRLLKSTIHPDINDLSATRFTRNATRAIVLNGDNILLLYTKRYHDYSLPG GGIDEGESNIEGLIRELKEETGAHSVKDVEAFGLYEEFRPWHKEGFDIIH MQSYCYTCTIDDELLEPELEAHELSNGMHPVWMNIHQAISHNEETIAKND KKGLSIERETFLLKRIVSELLNEAEPAISR >CPS_1302 putative helicase MKVLEKDYQINSVRKAIDAGANSIIALPTGGGKSICILKLCQAMPDKKVV ISLRNAALVPQLLHTLTINGLSVSVVKSGYKYIAGGDVTLVMEQSFGRRK HLNIQCDVLLRDEYHVGCMGGVYIAMREELSPDLIIGLTATPIDRLGVYI DKSMQLIEETTTKMLIEAGELAKPVYKVPSLSQEIDYSAVKMYRGDFSVS GLDNILLEHCSLVAQQTVDDALSHGRKVMLFANSINHVESLSEAFDLLGI EHERVHSQRSSDENDESIRRYKSNEVRLIINMSMLTIGFDDPTTDCVVLA RPTKILRLYLQIIGRCLRASKGKTSALILDLAQCISTHGFAEDLRDFTRK TSKSAAIMAERLSVTNIGQFVDGEFTYNESIERKVVKKRAPVIRRKPRDG LVASKELVDRAASNRAAALLRLNPRMEKLVSTIELVNIVYEQQDESSKML DEVAMVKLVALIGFAYSDALVDSCTALVEGLHAQNQSIRGLPLRVSNLIT SIAMQDLGVKEVVTKS >CPS_3758 putative primosomal replication protein N'' MPQNRHEIAISRLSTLLEHISVQAKQTDQLNSKQKSHRLIENNNLFSQHL FTTESDKIFIYVEEVKKRLNEFSRLYALSGDNPNKAEFAKSSLQRIEQQI SALMNAIQSNQTMHQAAQASFDARKNVRVKAAKAAQLKQNDVYNKMAKSV LLTSHQLYQQLSEHHEFERRLRDMITEREQQRIRSKSANTEKLSQEVLAL HQRLGRCRKAISSIERSIEQAEKSKLR >CPS_2757 ATPase, AAA family MKTNDNPTGKSPSGLGHNQGNSEGQQDSLFDLTPDNDEVTSTDNTSTQGN AAASSFMPLAAKMRPKTLADYVGQQHILGGDSPLAQSIEQGHCHSLIFWG PPGSGKTTLAEIIAQHANAEIERVSAVTSGIKEIRSAIEKAKLRAQGEGA NKRRTVLFVDEVHRFNKSQQDAFLPHIEDGTIIFIGATTENPAFELNQAL LSRARLYTLKKLTRDDLAQVLQRAISLCEAEQQLSIKLSVDAKQSLLNRS DGDARRLLNLLENCLDSSVTTHENKQDDQHGEQGVSGDIKTVTVELIAQV AGSKIALYDKGGDAFYDLISAFHKSVRGSSPDAALYWYARILTAGGDALY VARRLLAIASEDIGNADPRAMQLAINAWDTFHRVGPSEGERAIAQATVYM ALAPKSNAVYQAFNKAKILAQQTCDLDVPLHLKNATSSITKDLGHGSEYR YAHDEVNAFAAGENYFPEALAKGDSSHTRLYQPTERGLEKKLKEKLDYLN QLDRNSHDQRY >CPS_0188 putative helicase MNAIPNVTIRVTKVLATYNSGKMRFSGVPVCPNTHQKLSKRDFYLITATP EQAVFEPEIGQVWKINGEAYTEEKPSYKKHGVDLFHEIRRAKQCVCVLPK TEDAFIAFIKEIAAFKGVGAKWAKKLWTEFKLETLKHMEHRRAATLETVV TPNIAKSLINGYSKYRNLKYATWLTSKEIPIKIQKMIFEFQPISNEIRIH QSGYKYAIDPRTIIEENPYILASSFSMGFFDVDKLVRRKFEPNILSEDPR RMIAAVSEAIRLCVKGDYETGGHTTVPYKKLLKALTEILQETEQLASIDK SYTKPLFTMEELAITALQAHQKDAYVIYPDGQYQLTPTYLMENVIALRML NMKSQIVTFGEEESEACKKAFDLSPFPLLSKQKEAVFTAIESSISAIIGG AGTGKTTVLHAVLTAFEALGYVSDASLCPDKTTTNHNIKTMALSCRAAKR MRDCINKSSDGSRRERQISATSIAQFIHQTVIEDAEGKYLVVIDEASMLD VATMYNIITNIHPNVRILLVGDHYQLPPIGGGNVLADVVNSGVIPTVELD IVKRQKGNSGIPEYSKFVREGTVPPKLSSGAVYFHEVESDFIADKCASLF ALSPLDSMVVGSTNAVVKEVNKFCQDEVNPDGERYAEGKHSDFIKIVLGG LRQGDSVLFKENISLDVTNGSLGKLVSVECKKDTFGLVVMDDDDIEVRLE EEIMPALMLGYSMTVHKAQGSQFPIVIIALAGGYIDRSWLYTAITRAECE LHIVSTKKKLLTAINKPPSALGRRTRLKMLLQEGADQI >CPS_2857 ISCps9, transposase orfB MATVSGGSPSERFGFIEKHKEALGVKYLCSWLDVSRSGFYAWRRRPRSMR AINDADLLLNIKQVFNNNHQTYGSPRVFHALKREGITTSEKRVARLMREN GLRARALKTYSRPAKVKFFYKAIKNNRKNISKPDAINQQWSGDITYLKVG SRWYYLAVVLDLFSRRIIGWAFGQNKSTALTLKALQLAIKKRKPTQPLLF HTDRGAEYRAHVVQQFLVKHNITASMNRPGCCTDNAEVESFFHSLKADLI RGNVFATTDKLHSKLKGYMNYFYNRQRLHSSLGYKTPAEFELAVN >CPS_2951 DNA repair protein, RadC family protein MNDNNDKVYISDKPMTENQILDAAAEILACKYVRKDAFTSSQATKDFLRF KLANKEHEIFAVMLLDNQHQMIDFVELFRGTIDASAVYPREVVKTVLLEN AAAVILTHNHPSGLNSPSIADKDITKRLQEALALIDVRVLDHIIIGEGTY SFAENGLL >CPS_2015 site-specific recombinase, phage integrase family MALSDTKLRKIKAPYNGEAELADRDGLSVRVSPKALITFNYRFRWEGKQQ RIKLGRYPGLKLIDARKKVNEYRHNLDEGLDPRVVQNESRSHNLFGDMCE AFMTKYVMTELRPKTQTLYKSTFNKYVTPYKNIDIERYKYTDWIAYFDWV KKESSSANAGSVLKRFKAVANWAKARGQIKHSHLIDIPIKAIGSHQQKRE RCLEWDEVIGLWRQIESSKSTPQCKTCIQLLLLTGARNAEIREARRDEFD LDKNIWLLPPERSKTKKQVRRPLSTGVIELINKLDLIYGQDREYLIAGDI KGKPLTTHAVNRFVQRMNNHLKYPHFVPHDFRRTIVTRLSEHKVELHVTE KMLGHELGGILTRYNKHDWIDEQREAYELYWQKVTLLLKN >CPS_4852 ISCps5, transposase MAKLNGNYSVYVGIDWANDKHDLCIQQANSDRRKFKVIKHSANTINDWII SLHKQYKGQIAVAVELSKGPIVYALQKYKFVTIHPVNPSMLAQYRKAFSP SGAKDDPTDAELALDLMLNYPKKIKALKMESEPVRKLTYLVEQRRRLVED RRRFSNRLINTLKQYYPHLLDWFSHRGSGMFCDFITRWPNLQKLKRARTD TLRKFFHAYPGRTASCTEQRLVLINKAEPLTLDNAVIESHQLLAVALANQ MLVVVEAIKIFDKEISVLFETLPDAELYKSLPGTGPCLAPRLLVAMGENR SRFTSASEIQMSAGIAPVTERSGQKCWVHWRYQCSKFVRQSFIEWAAKSV HQSYWAGIYYQQQRSKGNTHQSSVRSLAFKWIRILYRCWKTKEAYDESKY LKALRDRNSPLLFKEKAC >CPS_0999 serine/threonine protein kinase domain protein MDNKLPHYSRERLLGEGGMGKVYLAQDNQLQRQVAIKELTYQPKDDEVNH ALKEARLLARVNHSNIIQIYNVHDEGDHISLVMEYFNSKTLTQFQQEAYT TLVQKLDLLQQLSAGLAAAHKNGVIHCDLKPSNILVNDQGQLKITDFGIA LLASNESQNSEQTASNNPLQFGSLLFMSPEQIKLQAVDYRSDIFSFGIIA YQLMVGSHPFAYGNNGGSATDVAKRICEHTPEHAKNLMLNAPSALTDLLM EMLVKPLEQRTLTAEAIENRLKHIRTALLQAEISEQATMPLSSGSANIAG DDTGQYTQAVHTTLLSQNTQIVQPADNLQASWFKQNYKTVASIALLCLVM ILFVGFYNTQEVETKQVVILKPTLADSSLMAPMQQDLVISAVEDALRQAV INTKNMYLISQREVNAITKEYPDDLNKLRQAVGASDIISTTLECDNSRCK VSFSRLVVNDNSSDNLSVKSEKNWLAPVDKFNAIFSTSQTQFASLFPEES EVNQSGLVQRPINENDYRNYIELYSQIKGQGEYSVESLTKLETLLTRSPY LYAAYGLFRETASNLYTDSRDEIHLKRLELVLQNSPPEYRYSVYHAIDSF FVAYKIKELDTAQQQIIEAKNKGASSFVLSELNAILFFSKGQYQKAADTF EEALVLRPSTTLLYNLAFSYWRMGDLSKAEDALNKMLEIIPGNYKAQQLQ ANIWLLQGKLELAITAYEKIVAALSNGRDLTNLSLAYALNKQYKKSLIYA KKAVDLSPKNRIRRLNLADIEFILGRVKSSNFNYKKVIDAPVDNNKYRYW LDIAQAQLQLNQQNLAIEALNKAKHLAPDNGEVAYTSALVYSVLGERVSA IFEVNKALANKVGSVWFNLPWFDSLCDDKEFELLMVKYNNQKRCRT >CPS_2958 ISCps3, transposase orfB MATVSCRGTSSRYRFIEKLRADIKVTRLLTFFDVSKSGYYDWRERQPSAI AIEDVELKHKIQQIFKENIGRYGSPRIFKALQKQGYNIGKKRVERLYRAL GLVARVMRVTTRSAFYKRFLTTGKNLRPDGEVPLAKDKVWVADVTYLKVK GVWRYLSVIMDLYSRRIISWSLDKSRTMEVTKRTLQNAVKKRKPSGDLML HTDRGVEYRGHIYQKALKRHGITHSLSRAGKCTDNAHMESFFHSMKTEVI RGNVFKSDKELRGTLGNYINKYYNVSRMHSGINYCSPIEYEALAA >CPS_3321 ISCps4, transposase MTKFSVYIGIDWANDKHDVCVQVANSSARKFEVIKHSPKSINEWITSLHK QYKGQIAVAIELSKGPIVYALQKFDFITIHPVNTSMLAQYRKAFSPSGAK DDPTDAELALDLMLRYPNKIKALKMDSESVRKLTYLVEQRRKLVDDKRRF SNRLIITLKEYYPHLLDWFSHRGSGIFCDFITRWPNLQKLKRARADTLKK FFGSYPGRTAAYSVKRIQSISEAEPLTLDNAVIESHQLLAVALANQLLVA VKVIKVFDREISELFNALPDAELYKSLPGTGPCLAPRLLVAIGENRSRFN SASEIQMYAGIAPVTVRSGQKSWIHWRYQCSKFTRQSFIEWATKSIRQSY WAEIYYQQQREKGNTHQAAVRSLAFKWIRIIYRCWKTKEPYNEAKYLKAL SDRNSPLLFKEKAC >CPS_2945 putative DEAD/DEAH box helicase MNNLIISSLFSGTELRDLHHTVDSVISHYPDNHFAQRLKKVVDGDNTSLL DLLLSIKDYLYSSQKELDNQHNNFPIPRRLSSEEGVLCAKAMLNYQVGSN FLTLSTPVVSQKLMDVYEQKQKRKVKKVEMDLALISRLSDQNYSQYSSAG QRMAVRVALTCPQDSTLFINLPTGCGKTLVAHACMLFSKSKALTIVIVPT VGLAIEQGKRAKELLEKADSDSVQNYAWHGQLSDGEKSEIRDNIDNDKQK VIFTSPESVTGSLLPLLFRLAKQNSIANIIIDEAHLIDTWGSNFRSEFQR FGALVASLRQVSNSPFKTILMSATFTQSNIGSLTTLYCESDNKPIVVNGN FLRPEISSSYKNEGENNHLQSVVGRVIALPKPLILYTTLVQDSIDLSCHL KAIGLNRIALFNGKTDIRSREKIIEQWQKDDLDIIIATSAFGVGMDKSNV KSVIHACIPDNIDRYYQEIGRAGRDGEAATSEVIYYNKQLAKAKKINSER IISTELGFKKWKGMWDRRVEVSSHSVLKGDLYLLDTSYYHEGLSNQSDRN EDWNWLTLLFMQRAGLIRIFYDVPEIEDDSELNDFERNSQRKEYWKGYNS KILVLILNEQCLSNLYWETNIQKHRNKEKKTQDNGFLTLSENITSLEQPI CKELVKYYTVNGNSPQRACGGCVACEGFLPTVGDDVSVDNYSSSHLLPNT LNDYISFDNVCSVYYDKSQDLTSELKWSVFIKLMLDRKYIFAVKGDIEFL KRLAGKQKGLKSFKPFWISQSYLDNSNIWPSLHINSSIGSEVLIPSFEDQ ATFFLAEYNQKTKSNKYRLWWQDNNKSIPLTNFIKIVEKNTCL >CPS_2963 ISCps9, transposase orfA MPRYTQPKKTWFYPVNFKIKAVELSLRNDMLSKDVAQALDIHPLMLSRWR KEYREGKFKKNQHYQSNSELMSKIPTKKELNKIKQLQKENDRLKMENDLL KKWQRYLAEVHQSDLDSSKNTKKP >CPS_0367 putative phage replication initiation factor MKTKPTTIPCLVDALSLTWSPKELLNIKQMAKIGACIKSELIVKAKDAAL NRELAKLENTKNKELLGTNAFNAHEYEAILSRYKESCSTITREYNNRRHK DLPLKSLALSDNEVSARYELRDMLKGELEVDTGIKYGDRLNNLLDNIGVD LLDVLCCGEVERFVCRLNNVFTQETFIWTVKNNPTGRFNYSYSATLYADG EQAGVICWGGKNLGCYVSFMGTGCNALDMKRLYEEIKNIPALKITRIDLA HDDYAGKHSIKRALSKAKKGLFNSGGRPACYMYVESGHLTEKMLKENFKD LKEISNESTKSTAKKTFGFIPSKGKTLYIGSRESGKLLRIYEKGKQLGDM KSKWVRWEVELHSSQRVIPLDAMVKPSEYLAATYPALNFLSVEQCKIKTL VKQATMTIEKIVENQVISTRKAINMMRVICGLSDSEIVEKFVKDIEEPDC RSSMPKRLKASVIEEWVLQQQAQTAAA >CPS_0155 methylated-DNA--protein-cysteinemethyltransferase MFIDYLDTPLGLFEFMATEQGICQAIFCGDQSYDDKKGERKANDITALCK QQLIEYFAGQRQTFTVPLDPQGTEFQQSVWGCLAKIPFGTVKSYGEIAKM LDKPKASQAVGGANGRNPITLIVPCHRVIGGDGSLTGYAGGIERKLWLLN HEGVEVKQTNNNANLDIKNVINKRQEKTQFLR >CPS_1409 ISCps4, transposase MTKFSVYIGIDWANDKHDVCVQVANSSARKFEVIKHSPKSINEWITSLHK QYKGQIAVAIELSKGPIVYALQKFDFITIHPVNTSMLAQYRKAFSPSGAK DDPTDAELALDLMLRYPNKIKALKMDSESVRKLTYLVEQRRKLVDDKRRF SNRLIITLKEYYPHLLDWFSHRGSGIFCDFITRWPNLQKLKRARADTLKK FFGSYPGRTAAYSVKRIQSISEAEPLTLDNAVIESHQLLAVALANQLLVA VKVIKVFDREISELFNALPDAELYKSLPGTGPCLAPRLLVAIGENRSRFN SASEIQMYAGIAPVTVRSGQKSWIHWRYQCSKFTRQSFIEWATKSIRQSY WAEIYYQQQREKGNTHQAAVRSLAFKWIRIIYRCWKTKEPYNEAKYLKAL SDRNSPLLFKEKAC >CPS_0149 leucine-rich repeat protein MYTSAVFNHIYGRFMLHTLSQLRSGELAGISQLKLSENLNTFPLEILTLA DSLEILDLSNNALSSLPDELAQLTKLKIIFASQNQFEHLPEVLGQLPNLE MVGFKSNQIKQVAEHSLPAQLRWLILTDNLIETLPNSLGERPRLQKLALA GNQLTHLPQTLAQAHNLELVRISANKLTECPEQLLNLPNLAWFAFAGNPF TAVEPTTHSESYTKVKSVPELSSTSYTLENVLGQGASGVISKAHWNSPQS QFPEDIAVKVFKGEITSDGYPQDELQACLQVGYHPNLVESLAQVNEDNYL ALIMTLIPENYQNLGLPPCFNSCTRDTFSQGFRLPITLISNIVSQMQDVF AHLHKNQVCHGDLYAHNTLFDSQGNIIFGDFGAATSYQMLTPAQQEKVKN IESKALNHFIDDLLSICAEQDKTTKAFDTLKAHISA >CPS_0894 ISCps3, transposase orfB MATVSCRGTSSRYRFIEKLRADIKVTRLLTFFDVSKSGYYDWRERQPSAR AIEDVELKHKIQQIFKENRGRYGSPRIFKALQKQGYNIGKKRVERLYRAL GLVARVMRVTTRSAFYKRFLTTGKNLRPDGEVPLAKDKVWVADVTYLKVK GVWRYLSVIMDLYSRRIISWSLDKNRTMEVTKRTLQNAVKKRKPSGDLML HTDRGVEYRGHIYQKALKRHGITHSLSRAGKCTDNAHMESFFHSMKTEVI RGNVFKSDKELRGTLGNYINKYYNVSRMHSGINYCSPIEYEALAA >CPS_1109 hydrolase, TatD family MQFTDSHCHLDDIAFSEQLPALLAQCQQLAINRIIVPSIAPDNFTQVLNL AKRCRDNLSNITNTNPIKIYPCLGIHPWFLQALNDSHLQTLSELVIKSRN EIIAVGEIGIDGAIAKQAVNHGQTPEDNLHHQQHFFDFQLNLAKQQNLPV IIHHRQSHDKIMPFLKKYQLERKGIIHGFSGSYQQAMGYIDLGFKLGVGS TITYSRAKKTINTLKRLPLESLALETDAPSMPLSREVTGEEVLTNNEGTE QEKLETVVSSPTNSPVNLIKIFEVLSTIRPESSEEIANQLEHNINQIFFT >CPS_4433 conserved hypothetical protein TIGR00252 MLWNNKTSAKNTSSTDKGQVTESYAQQYLSKQGLRFIERNFHSRQGEIDL IMLDGDTYVFVEVKYRKSKGFGGAIAAISASKQNKVKHCITFYLHQNGLN EYNTPCRVDVVALEGDITQPQVTWLKNAF >CPS_1152 conserved hypothetical protein MNKDFSFTIKSICLDENYHPSDKTRITTNFANLARGSYRQANLRNALKMI DNSFNALAHWDNTKGDRYSVELEIISVDIDIKGSGQAFPSIEILKTNIVD HQTNKRIEGIVGNNFSSYVRDYDFSVLLLDHNKDQPKFSIPNNFGELHGK LFQYFVNSDVYKQNFTKTPVICLSVSDTKTYHRTENQHPVLGVEYQPNES SLTEQYFKKMGLQVRYFMPPNSVAPLAFYFFGDLLNDYTSLELISTISTM ETFQKIYRPEIYNANAVAGKSYQPNLKNLDHSLTQIVYDREERSQLANEQ GKFTEEHFIKPHQTVLEQWSASYVNSYAQ >CPS_1290 ISCps2, transposase orfA MTKSKSYQRYPAEFKRMALLKASEDGVTANSVCEELGISFRQLSRWRDEF RLKGDDAFKGNKQTSNNELTKLKQELAKVKKERDFLKDAVVFFAKESG >CPS_0156 putative methyltransferase MNQAKKQLSKKLLSGRGQGKSAGKIRIIAGKYKGRKLPVLMAEGLRPTTD RVKETVFNWLMPYIAQANCLDCFAGSGSLGFEALSRGADEVTLVELNRAA ANQLLENKDLLKADNINVINDNALVFLKKDPLKVGLTAKSDKPFDLVFLD PPFRKQLVEQTAQLLNHFGLADQALIYVEMEADSTQVIPANWQLIKEKIS GQVVYQLYQYQG >CPS_3122 ISCps9, transposase orfB MATVSGGSPSERFGFIEKHKEALGVKYLCSWLDVSRSGFYAWRRRPRSMR AINDADLLLNIKQVFNNNHQTYGSPRVFHALKREGITTSEKRVARLMREN GLRARALKTYSRPAKVKFFYKAIKNNRKNISKPDAINQQWSGDITYLKVG SRWYYLAVVLDLFSRRIIGWAFGQNKSTALTLKALQLAIKKRKPTQPLLF HTDRGAEYRAHVVQQFLVKHNITASMNRPGCCTDNAEVESFFHSLKADLI RGNVFATTDKLHSKLKGYMNYFYNRQRLHSSLGYKTPAEFELAVN >CPS_4401 endo/excinuclease amino terminal domain protein MTEINKTNTWWVYFLRCNDNSLYAGVTTDILRRIDEHNNSKLGAKYTRAR RPVSLAYLEEADDKSTACQREYKIRHLTKVKKELLVSKYSQTKQV >CPS_2962 ISCps9, transposase orfB MATVSGGSPSERFGFIEKHKEALGVKYLCSWLDVSRSGFYAWRRRPRSMR AINDADLLLNIKQVFNNNHQTYGSPRVFHALKREGITTSEKRVARLMREN GLRARALKTYSRPAKVKFFYKAIKNNRKNISKPDAINQQWSGDITYLKVG SRWYYLAVVLDLFSRRIIGWAFGQNKSTALTLKALQLAIKKRKPTQPLLF HTDRGAEYRAHVVQQFLVKHNITASMNRPGCCTDNAEVESFFHSLKADLI RGNVFATTDKLHSKLKGYMNYFYNRQRLHSSLGYKTPAEFELAVN >CPS_3215 putative ATP-dependent RNA helicase SrmB MQFSDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSG KTLAFIIPALQRLSKNRALSKRDPRVVILTPTRELAKQVFSQLRLFTANT QYKAVLILGGENFNDQVKVLQKEPEFIVATPGRLADHLTQGHFHLNGLEL LILDEADRMLDLGFSKELTQINKAADHRKRQTLLFSATLDHAQVNEFATE LLTKPKRIAINAGHSEHVDIAKRFYLADNLTQKEALLQHFLVTEKSQQII IFTATRSDTDRLAKLLTEQNLNAVALSGELNQGQRNQIMESFSKGQHKIL VTTDLASRGLDLINVSHVINFDMPKHTEEFVHRIGRTGRAGTKGDAISLV GPNDWLSLKNVEAFLQQKISFTKVEGIKVKFKGLKPKKEKAVKAKVSVAK DKKAVSNKPRKVIKKTFLDIEDAGAMKIIKRKKLTPDQIEDATKKEQD >CPS_0184 site-specific recombinase, phage integrase family MTISIQPIKVNVLVRIDNTDKTYELPAVYVPGEGYLGSFLCYIVKHRTKS KSWKDKAIQAMILLIEYTYANEGCFDTKQQMFEEFTNSLHAGTINKDGDD KTGLRWRPLSVENANALKGHITKFSDHLFKETGGESALLNPIRTATGAEK MVNLAAYHHKKNAVFLSHLFDKNKNNDIDTSRNVRNRKEFRTPQVDQSVN FSEEHIDALLWDGFIQPGSTYLSPVHERYKLAPLLITMLIHYGGIRPCEA FHLYAEDIHLDPSERVVIRVYHPIQGRAPEYYRDQPGNKGATRIEYLNKK YGLDDRFSDSRKAYHAGWKEPALADSKAKFFYVYFAPTEKGILFYQLFKQ YMIHQRKVRKLGGQDTKHAPEAHPFLFTNRNGDPLSMRSFEDFHKEAVKA IGLEAFRANGTSQYCHRHAFKKRLEGMSVPEVLRMDLMHHKSIYSQNEYG KASNQEIYDKLSNANALSSHETALLSNLKNAQ >CPS_3595 MutT/nudix family protein MTLAYGNMPLDRGTNQRKNKRWLATEFTREDTLFCVINDGQCLFEEGDIL SPIYLSKSQVPTVSVDSCIYLGKGHLSKRKLGLESIENDRLTITITGNSN SIQASAIAIFAIDFDKLRFSTQEILGEMGQWQGLRKVTASLSAIDASILA LAKGLVHWHISHQFCGQCGHANRSVEAGHARRCSDCRNMSFPRTDPAVIM LVEKMFADGIPRCLLGRQASWAEGMYSTLAGFVDPGETLEQAVIREVVEE TAIHVEKPHYITSQPWPFPASIMLGFTAVATSEKIDISQDDLEDAQWFSR EQLVNFGINNSVIAEDGGAEKPQYKMSSGDSISSYLVTAWKNKEIGQY >CPS_3101 endo/excinuclease amino terminal domain protein MKQPAVYILANKKNGTLYIGVTSDLVKRIWQHKNHVVSGFTEEYEVHQLV YFEQLDDMENAITREKVIKKWNRAWKIRLIEQNNPKWLDLYNDIV >CPS_1289 ISCps2, transposase orfB MMCALLDISRSGYYAWLSRPLCKTKQENIQLTEQISKVFEQSRCVYGAPR IRAALNADGQACGKNRVARLMRVLQLKGRPKRVFRRSAKSNPYVEPAPNL LHQNFVSKAVNQVWSSDITYIQTKQGFVYLAVVMDLYSRKIIGWSMDKNM GRHIAMNALGMAVAARNPSDGLIIHSDRGSQYISDDYQQMLNENGILCSM SARGNCYDNAVVESFFGSLKRERIRRYNYRTRQEAQIDVFDYIECFYNKR RLHSYLKYKNPSDFEAEGNILN >CPS_2355 site-specific recombinase, phage integrase family MTQQRKAEEKWMPPRVYKTKVAYVFQPKSGGKIRLCGLDVAKSLVWMLYE KECASLDNFNSVASLFEKFFLSASFIDKAPRTQKDYLGYKKDLLIAFGKM DINKVEPKHVRMFMDKKAVKSGISQANRHKSALQSIFSWAYERGKIKVNP CVGVKKFTEKARDRYVTDVEYQALLNHACPVIYAAAEISYLCMARRGDVE RLRKEQLIADGIYIKQGKTGKKQIKEWSPRLKKAISHANKVNPSISSMYV IHQFNGSGYGTNGFRDRWVSTMERARKSTGYLMDFTFHDLKAKGISDFEG NLEEKRNAAGHTTIKQTADYDRKTHIVPTVKSRN >CPS_3615 MutT/nudix family protein MTKDEFLLRFNLLQLAESEHNYQHPSPLRSAAVLIALVESDSGEGLQVLL TKRASHLKHHPSQVSFPGGKVEREDKSLIDTALREAFEEIGLSREAVTVA GQLPPYETISGFQVTPIIAIVASSQIYQIDTNEVTEVFQVPLQHFLTTTD HHVFVAHKGGKQHNVHFLPYKEYNIWGATAVMLKDLVAHIN >CPS_1707 putative protein kinase MTNKKLQHFYIAQEQSIYLLSHKDATKLKQWVDLCQQQLKQLGFEDVALL GKGAYGFVFSGIKRKGSSADQLPVVFKFSRINLPQHVQDRLAEEAEIQGQ LSHPQIPEVIDYQKIKRQSILQMTRAPGIDLEQLSLQVGPLAPELVVSIA LQLADILLYLRQANNHRQLKPIVHGDIKPSNLVYDKSTGKVQLIDWGSSV SAQLDCDKQSTSTNVMDLMSSDLQHSNARLGDVYFIGPEQLNGGLSSPRF DEQGLAATLYALASGQSCRYGVKVIPPNALGLPKLLAQVLTGMLSDDEKL RAQAGDYFFNNLTYLKQVVLADKPTKINAIAQIPVWVKPQGEQIDTVVYG SRKSFLREQTGHDSLSNIDDAQLDKYYKNYLMGMGDNEKAFIAALSRLGN FPVVGGIAIRWAKEGVYIDSNLTLFDEALKTAFTSAVNNIIYLAQGIFRV GMFKSCLFNARNTLHVERIKENQPFVADETQVIQFEVSDVPDVDDITRLH SYFEDGKDPDEYLHLPDELMSVLAELNLIHHTGCIIFEVLPKHLKIHSYL MLLNHEKEAEFTDCLAKVLTLLPTIDGVGISGFMKLPYKDTRFFEHISSM PDKFYPKNPKL >CPS_1418 ATP-dependent RNA helicase, DEAD box family MSFSTLKLSTPILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTG KTASFVLPLLEQLNSQYKETGKKLRAKRIRALILVPTRELAVQVEASISQ YAKYLDISSMAMYGGVDAQEQKQRLIWGVDILVATPGRLLDMTHQRVLHF DELDMLVLDEADRMLDMGFIDDINKIIERLPEHRQNLLFSATMSEEVRGL AKRTIHKPVEISIGADKASKPKIEQWLVTVDKANKSALLSHIITTQNWQQ ALIFIETKHGAAKLVSQLEKRGIVAESIHSGRAQDIREKILNDFKSGKIK FLVATAIAARGLDIGELSRVINYDLPAQVDDYIHRIGRTGRAGASGEAIS LVSKDNFRELCAIESRLGHIIERKEFEEFPVKKTVPLSKLNYVTKYAASK K >CPS_1125 ATP-dependent RNA helicase, DEAD box family MSDTPTKFTDLGLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAA QTGTGKTAGFTLPLLQRLSSSKGNKVSSNNVRALILTPTRELAAQISESI EVYGKYLNLHSMVVFGGVKINPQIARLRQGVDVLVATPGRLLDLYNQRAV KFSQLEVFILDEADRMLDMGFIRDIKKLMTALPKDRQNLLFSATFSPEIR ALAKGMVNNPLEISVDAENSTAEKVTQWLTAVDKKRKPAVLTHLIKENNW QQVLVFTKTKHGANKLTKHLEAEGLTAAAIHGNKSQGARTKALAAFKDGS VKILVATDIAARGIDIDLLPQVVNFDLPNVPEDYVHRIGRTARAGNTGQA LSLVCADELDLLWGIEHVIQQHIERKVIEKFIPANELGESRVIKPLKQGK PPKSAKPHGAGKGRVEHKDGQRSGRNANGNNAGGNKAKPGNDSSRRKKPE YDGTGPKPRRAIRPTK >CPS_0501 haemagglutinin associated protein MDSNFIISQSDAVDFLKSLPDESLDLVITDPPYESLEKHRKIGTTTRLKH SKSSSNNWFEIFPNSRFEELFIEIYRTLKNNTHFYLLCDQETAFIVKPIA ESCGFKFWKPIVWDKMKIGMGYHYRARYEFILFFEKGKRKLNNLAIPDVL QVPRVYRGYPTEKPVALMDILIEQSTEKGFLICDPFMGSGSVGVSALSLS RKFYGNDLSIDSLNHTIDRIKNIEETPDTC >CPS_3583 putative methylated-DNA binding protein MKNRTNNTMLNPHYQQIWQTVQLIPQGKVACYGQIADLAGLPGRARLVGK SLGKVPKDGWRGQRVPWFRVINSQGKISFPPGSENFDKQKHHLQDEQVVV IGSRIKLKEFQWKPDLSELLFSLEF >CPS_0490 putative site-specific recombinase MYRKYAISYIRFSTAEQSLGDSYNRQFEEAERFCFENNIKIVKDYKDLGK SAYKSVNLAPESGLNYFLNALKRGEISNPKETHLLVESLDRLSRAQVTTS MHLFLGILKQGISILTLADGKVYEQGCELSDIVTSVMMLAKAHQESVDKS YRIGKVWKRKKEAARADAKNKAGTDKKVTALTKMCPFWLKIVKENDRFVY EIKEIEVNTVKLIFDLATGDAIDNEVELSISVENTKFSSIEIARILNNEN IPIIKSGKRKRTDYWHASNINRIITNKAVYGIYQPKLLVKKEYTHHDDFN ESYPVEKPYFENDGEAIEEFFPVIISKDKFDRATHQREEKFKGKRGKKGK RFSNLFNGLALCRKCQSSMVHSDKGTSKKGKRWVYLQCSNARIKGGCSAT SINYSILEYNVLQFVQGTNFSELISNIQLPSVGEISQQQNIIDIVEANLN KISKQFHKYMEFDDDNDPDFADEIKLKLIELRKEKRTLNSKWSNEKVKLG NMLTRTSSVNLDEMSFKKLIKEIDISNQSKENDDVYFKRQKVNSLLTSLI SHVYVDTLRLKALIFYKSNVIQLVDIKDEIATGTIFSTVRLPSFKFSSKI ESSYQDAFKDAFYDLVMMLIDGKMNMSATSLNESENEGLLNLEKNFSHVM SYPKILADSFKAGGNDFSVKFNEEQYWFEVS >CPS_0780 exonuclease MNANSLIILDFETTGLSPDNGDRAIEIGAVKLENGVVTDRFQELMYPGRP VSHFIADYTGITNVMLSKAAPCHEVMDRFSGFIQGQNLVAHNASFDKRFL DSELKRISSGYDGQFACSLLLSRRLYQTAPNHKLGTLINYKGIASNGSFH RALYDSEMTAKLWVAMLDDIQQQAGIDEVPFSLIQKLTKTTKANVGKLLA NYR >CPS_2658 ATP-dependent RNA helicase, DEAD box family MSEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGT GKTAAFSLPIINKFGRNKIDIKAKSTRSLILTPTRELASQIMQNIDDYSD GLGLKTKVVYGGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKAL EVFVLDEADTMLDMGFFKDVQSIISKLPKSRQTLLFSATMPAEIEILAEA ILTDPTKIQITAETVTIDLVNQSVYHLDKSNKVPLLFNILTKADYEKVLI FCKTKYGADIIVKALEKASITAASLHSGKTQAVREEALQNFKDSTLRVLV ATDVAARGIDVDNITLVINYNLPEDPRNYIHRIGRTARAGKSGMAISFAV ENDIRQLTNIENSIGQVIPVVTEQPFHKEFSKAPIQDKKKKQVKKTKRK >CPS_3375 ISCps6, transposase MSHHIKGQGRNQITLFPEALDDFVTKENHVRVVDAFVDELDLHALGFNRV IANNTGRPGYHPAALLKLYIYGYLNRIQSSRRLEKGSHRNVELMWLLERL QPDFKTIADFRKDNGKAITKVCRHFIELCRQMNMFTDAVVAIDGSKFKAV NSKHNNYTPNKVKDHIRRMETHIENYLSRLETADGNDKVDAVQTSAAEKI AWMKQRVAELKELAVQVEAHPDKQLSTVDPDARLLKTQGMNRQVCYNVQS SVDTKHHLIVTHEVTNTNDRGKLADLTRLTQQALAQKNITVLADKGYYSG RDIKATQDMGASALVPKGDTSGAKKKGIFNRSLFKYDKDRDLYVCPAGNE LPHKRNVEEGGMKLKVYVDHIACRNCDIRAKCTQSKREPRKIRRWIHEGE MEEMLTRLKNAPDTVLIRKQTVEHPFGTIKMWMGATHFLTKQLKNVSTEM SLHVLAYNLKRMMSIVGSESLIEAIRA >CPS_3194 conserved hypothetical protein MKQVAQLTLMVQLPDDETFDSFKSDINQGVVTQLKSYIESQQSTPHSFYL FGLSSVGKSHLMHASSTYAAQIGKSSVCLSCAELKQLPVEVLDGLEQIDL ICLDDIHLIAGDTRWQQAIFDLFNRVLEQNNYLLISGDESAQQLGISLPD LVSRLTWGLTEQVKPVDDEEKVIALQYRATQRGLFLSDEVVKFLLNRLSR DMGSLINSLDVLDKASIQEQRKITIPFIKEVLTLQ >CPS_0185 putative site-specific recombinase, phage integrase family MSNHRDKFYITWEEASKATIVLDCAYKKDYLEKYKSDPKLPSNPQRSYPE FKEKGGWSAYLSTGDKFYRTWAEASKAAIALGFNRSGHYFNGYKKDPKLH SDPSVHYPDFYKKGGWAGFLGNPVPTPKHETWEEASAAAIKLGITNTHEY KALYKKDPLLPSDPQRSYQDVWDKNGGWSGFFGRQLGSIDTSKMLKVLEI IDIEGYAEIDHVKLPKDPLKTYDLETFEELLTLKVYDLAQVKAYCERKGF QEVAEYRKASSDQQHLNNATPIGIKGYVSGKSIISKLTNFERATKEHPDY SQWFDMAIKFALLGKNIRKKKVILFNFVMEYLVDLEQPTQPAAFFARKHA PPLLTSFMEKQPKFAQSITGINILKDFIEDTFHRCCQDEDDDGISVVLPG FINKWSRIISTVEPVKIDRPDKSEKWPLAMNYIDRAAKFLVPDSAKTFQD VMQLECDWFIVDESIIDKDDLNCVWRTKMINSGYGKKMRYQMWSPVRTLA LFVLFSMPLRGQQICWLDSGEADTEIPIINAQDEVVWVKNDHHLINDVNK RTERQGFLRRFKDAKKTTVTNDKGIEETRREDIIGSYITTNKTSKDGKGY EVAYMPIHLIKWMIRLREWQSKYNPIDKLTSWESVALINEKNNKILKAMK SQAFLFRDPDTLHAEDKCQPIGRDKAMSNTFSWVLYQIQDKDIPLAYLPE GKSDCQMNNYKSDFTPHGMRVSFISAYILDAKLPISIVAALVGHASIVMT IYYTVTTNQDYYEMLSAGHQAALTAAPARIAGLIKNKQLKLSSSDFFDSN GQPVKPMYDKAPYAALGFKDFGICPVACSKCHEGGDEVKPGLNVFGPVRS GYLGPSNCFVCRFFITGPGYIGGLKTMLAEVGLEAKESGKRMEKFREERE ELEYLQYRSRKDDLPFEHEAKLNNILTLHQQEQEKFDALSYDASTIAIMG YRCSKLLQNQSENAENKGHQLILQEGNPMLGVKIDEVSEFAHMTEICQNA EIYACANPSRALPKRTKMLDMFALNNGFSPKIFLLSDEDQLKVGNQITSI MLNRLNGSWDDAERLMDGTVTLKDLGLSGKEIMEPVTLALNHWTPEAQVR IEVINV >CPS_2410 ISCps2, transposase orfA MTKSKSYQRYPAEFKRMALLKASEDGVTANSVCEGLGISFRQLSRWRDEF RLQGDDAFKGNKQTSNNELTKLKQELAKVKKERDFLKDAVVFFAKESG >CPS_3967 conserved hypothetical protein MEPFKNLYNERFYLTLSIHLKACLPDFDEQEFMALMLCDNFEVLELKERM SHTKAVMHQFMPTDFPQAADILVKLIASLTDAGITEGSVEYMFLPEYIET YGINHFQESVEVMEQVTQFTSGEFAVRPFLIKYGNQMLAQMILWSQHEHY LVRRLATEGSRPRLPWAIALQEYKKDPVELLPILHRLVDDPTEIVRRSVA NNLNDIAKDNPQVVIAFVKEYLGTSEQFDRTLKHACRTLLKQACPDTLAL FGYDSTGIKLTEFAILTNEVNFGEYAQFSFTVKNTSTRSKKIRLEYGLYF MKKNGQLSKKVFKISERNLGANESHQVDRKQSFKAISTRVFYPGKHQVSI ILNGKEFAAKDFVLIATSD >CPS_2955 hypothetical protein MNILDCFSGKQLTQGQHDLVEELDQFLFDDTRSVFLLKGWAGVGKTFITA GITKYLNTEGRQFVLMAPTGKAAKVIANKTKQKALTIHRVIYSYFDVNNS NENKDKLEPPIVASKIKENKDAPDTVYIIDESSMISDKFNKSEACSYGSG YLLIDLLEYINLDKRHKKKVIFIGDNAQLPPVRDNFSPALDNQYLRDKYQ LNCQAFELKEVVRQKAGSGVIAIAKQLRHTIGSNTFSELSFDVSAGDTHV LTINEMLEEYFRVCEERVEKTKEVIIIAYSNIQVRNYNNTIRAKLFSPDA PLQIGEKIMCVSNFIHDDSFISNGEFGKVINISSNIEIRTAEVYTERHGR RVLKYVDLVFLDVEIEFLDDHGKPFILASKILSNLLYGAMPRLSQLEYKA LYADFFQRNPNINYNTSPAECKELMNKDPYLNIIQIKFGYSITCHKAQGS EWAHVFVDRYHRLPKSNECLRWLYTAVTRTSKNLYVSK >CPS_2629 site-specific recombinase, phage integrase family MVLQIMLLTKPVPLYPPYIDLCDFDFDDYPQLDKIFSSNEPWWLEQFNWG KIFLTYIGRNKSAHTYERFRNDVERFLLWSFIVKKKPIDQLRKSDLLEYA DFCWQPPVDWIGTSNQERFKITNGYSAANELWFPYKIQAPKSLKSQFVID KKKYRPSQQTLSSMFTAIIVFYNYLMAEDFCIGNPAQIAKKDCRHFIIDS QVKEIKRLTGSQWQFVLDTAVEMADENAMFERNLFVIASLKTLFLRISEL SERPNWSPTMGHFWQDDDENWWLKIFGKSRKLRDITVPIDFLPFLERYRA SRGLLGLPSSNENSILVEKVRGQGGMTSRHLRRLVQSVFDQAHENMRRSE GENKALKLKEASAHWLRHTGASMEIERGRPLKDISEDLGHASMATTDTVY VQSENKKRAESGKRRKVD >CPS_3886 ATP-dependent helicase MTENNVSQVSQAFSPEGALAKAIKGFSPRQAQTDMALDVAHAIDKQSSLI VEAGTGTGKTFAYLIPAFLSLNPKNPKKIVVSTGTKNLQEQLFHKDIPLI KKALASNAQVALLKGRANYLCNYRLAQYQDSRGQLDAQMLQDLVKVKTWA NGTQSGDIGELVNVSEDSSIFPFVTSTLDNCLARDCPDYEACHLVRARQK ASDADIIVVNHHLFFADMALKDTGFGELIPKAQVMIFDEAHQIGDIASEY FGEAFSSKQLVDLCTDVLQVHRSSLTDVKQLGLAAEKLQKTCQEFRLLFN YDPERGNWREKYKQVQFQQKFANLKIDLDFLYQVIKLCVSRNEAIDNCFD RAVNLLAQYDVMANVEAYGMSFWYETTPRSVVLHQTPLNVSEKFNTFVKE SGAGWIFTSATLAVDNSFNHFAKHLGLQDAKQLLLDSPFDYQAQSQLVVP RYLPQANDKNRALKLAELAEPLIKASKGACFMLFTSYRVMHQVAEVLAES IDNPLLVQGKMAKRKLLEQFVEQDDAVLLATASFWEGIDVRGDKLTCVII DKLPFASPDDPLLQARCEDVRRQGGEPFSQIQLPQAVIALKQGVGRLIRD VSDRGVLVICDDRLVNKPYGETFLKSLPDMKRSRDINKAAKFLETLS >CPS_3374 putative helicase MDSVPSGDSRIHDQIGLANTIVQWLSKHIKDDQLISENLLDSQGKILTAL FDKSNPIAADLPKYVESIMPITGLTQSELFCGSNVGVSLETEIKREIQSS DKIYWLVSFIKWTGIRIFKKELESFTRSGRQLKIITTSYMGATDAKAVEF LASLPNTEVKLSYNTNRERLHAKSYLFMRNTGFDTGYIGSSNLSHSALTS GLEWNLKITSQEIPHIIKKSLSTFDTYWESPDFEYFDGEIESREKLSNAL QEARGSFNPSTPSFYFDIKPHSHQQTILEKLQVERDLHNRYRNLVVAATG TGKTIISAFDFSRFYNANPEAKFLFIAHREEILKQALGAYRGVLKNSTFG ELWVGNNKPSKYQHLFASIQSVNAQIETLALSEDYFDYIVIDEVHHISAS SYRAVLKHFSPQILLGLTATPERHDGSDILCDFCNVIAAEIRLPEAINQR HLSPFQYFAIDDDTDLTKISWSKGRYDIAELTHLYTYNDQRVLRILQSLS EVITDIPHMRALAFCVSKEHAKFMAKKFTLHNIACGVLTSDNSKDREVLQ QQLRSKQINVLFVVDIFNEGVDIPELDTLLFLRPTESLTIFLQQLGRGLR LTENKECCTILDFVGNSRPEYDFSSKFRALVGKTNQAIAKEVKQGFPHLP LGCRIELQEKTQAMILRNISQATLNKNKLISLIISFQHDTKLPLTLTNFL HLNDSITLEDIYKIKIGPFGGWSILVAASKNKEIAPENKALYAAYYRAIN NRLLNCSSISYLRFIKALCDNNFSISSMCDTNTNKTPQNHQQQFALMCHY DFWDKTGKSLGFNDVATGLLALRNTTLRSELAEVISMLIERLEVSEFTMP KVNNLLVDSSPLNMHVRYPKEHILVAFGDSTFVKKSSSREGVLNIANANT ELLFVTLNKCEKQFSATTMYHDYAISPTLFHWQTQNSARPNSGRGLGYIT QKENKKTFLLFVREQGKDENGRTMGFVNFGPVDFVKYEGSQPMNITWKLK HPMPAYLWHETAKLAVG >CPS_4949 serine/threonine protein kinase MKTDQNAYTKQAAQAPPLTPAIPLTQAKLQVFLGGHSNAGIKATNEDAFA SLVPKDAELTAKGVVAVIADGVSSASKAAEAAQLSVTQFINDYYATPQTW STQKSASKVLSSLNQWLYAQTDAVSGYTLQWLTTFSALIVKSSTAYIFHV GDTRISQYRQHELEVLTKDHQQKQGPSHSVLTRALGADHRLQVDVQQVAI QAGDIFVLTCDGVHEYLSAQQIKKQLNQLPQSPSTQALEQMAKLLTELAI KKGSKDNVSCLLVYIGGTPNRALVEIERELLNKAIPPALAVGNSIDDYEI CKVIHASIRSHLYLAKHPNESEPCVLKVPSKNLADDSSYLQGFIREAWLG ERLSNSHVMKIKRGSENSRFLYHICEYIDGQTLGQWMFDNPKPNLAQVRD IVGQIIIALRSFQRLEVIHRDLKPDNIMIDSYGKVFLIDYGTALIASLAE NNDVVTETVPQGTLNYIAPETLLTLHADHQSDLFSLGVITYEMLCGELPY KPMQRADMHSYTVDDEKSRVENYSQWQYRSIRQFRSDLPFWLDMVLSKAT QADPKFRLQAYSEFKADLSKPTASALEEYKSQPILQRNPVLFWQGATALF FILWLSTIFF >CPS_1590 ATP-dependent RNA helicase, DEAD box family MSVDSIGLSADLLKAVKACGYKNLTPIQQEAIPVIRQGVDLLASAQTGTG KTAAFSLPILDAIAKANHAAKSSTTSTDENSAEEKSASGQAIRALILTPT RELANQVADNIKQFSQYLPIKSGVVYGGGKMASQTKMLKQGLDVLVATPG RLLEHLALRNVDLSQVKFLVLDEADRMLDMGFLTDIEKLLLAVKHKHQTL MFSATFSDRVKSLANQLLKSPKTISVSKENTTSGKIKQAVYWVTEERKRE LLSELIGVNNWQQVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGAR NKALEQFSEGKVRVLVATDVAARGLDIPDLAFVVNFHLPFLPEDYVHRVG RTGRAGKSGTAISLVSPKDERFLENIEQLIERKFERIVAPGYEFNRLEAS EYQEATVKRDSKNRYRAAQEKNQNLAKKDVKIKSLSKNKTARTNSKYNNK IQKKR >CPS_2172 ISCps8, transposase MIKHNILFIGLDTHKTFTEVAYIEGQRGAKSIHLGKILSNKAAFKKLARQ LQSKYPDATLHFVYEAGPCGYWIYRLLTSLHHCCYVIAPSLIPKKTGERI KTDKRDALKLAKLLKSEDLTTIYVPEPEDEAVRDLSRSRETGMKDLKDAK YQLKALLLRNNINSKVKDNWSLQHLRWLAELVLPHPCQQIVLQEAVSTIT ERLKRLKRLDNELTHQVKSWRYYPVVKAIQAMRGVRLLVATGVIAELGDL SRFDHPRKLMSYLGLVPSEHSSGGKRRLGAITKCGNSRARRLLVEGAHSY KHNANISKEMQLRQEGLSKEIIDMAWQAQLRLCRRYSRLMHKGKHRNVVV TAIAREMIAYIWAISREIVLPVVDVKLRMARMPA >CPS_1686 ISCps9, transposase orfB MATVSGGSPSERFGFIEKHKEALGVKYLCSWLDVSRSGFYAWRRRPRSMR AINDADLLLNIKQVFNNNHQTYGSPRVFHALKREGITTSEKRVARLMREN GLRARALKTYSRPAKVKFFYKAIKNNRKNISKPDAINQQWSGDITYLKVG SRWYYLAVVLDLFSRRIIGWAFGQNKSTALTLKALQLAIKKRKPTQPLLF HTDRGAEYRAHVVQQFLVKHNITASMNRPGCCTDNAEVESFFHSLKADLI RGNVFATTDKLHSKLKGYMNYFYNRQRLHSSLGYKTPAEFELAVN >CPS_2616 hypothetical protein MAEHGYSLLRIIIIDSFWQGQVNELDLTGHTQLEGTNGAGKTSLMRLLPL FYGMRPSDIVSKVDQAKNFADFYLPRESSILVYEYARPFGQKCQVLATSD GRGVHFKFIDGAYDSQLFISSTQGSKAKPFTISEIEKNYRNIGKESSKFL GIDKYRQVIQNLRSGRKHKEIRVLQNRFSFSEQACPHIDKVINGTIEKNL DFEAVKRMLVAIASDHLARNTSDEKEQLSLNKADITNWLADIQASRAIKK VADKISVWQNDFSAFASLVNKLQHLHAETLAHQERLEVKQQQRDELKRSS IANRSSLESELANTIEKYQKAISDLNAKIEADLSKIELLDDDKFNYDDDD ASSYQIKADQAPQIQAELTEVIAVIDAFEGNITKIGQKFDKLIQKIEVEK LKALSTNKERSAQITSESNGQLAHINEVFHQQEQSLNAQLHKEELKLQKD QQHFQHQLSSAQQQLTQPTIPLELTTDIEENVIAFSQAQQSYNQLLQQES ALQKQQYQLDKQQDKQLTLRSEANRYLEQLRQDYHQVELQLLPQADSLHH YLINEPQAADWQKTIGRLLTTEQLSRTDLNPQWLESINAPASLYGLSIDL QQLPCDDSLFLDEAQLREKRQVIETKLQTQTDKITQLDEQLKSLAKEINQ LKVSASEHAQSVNQKKLTMGQLQTQQESLVVKKQLAIKAHRQTIETQLQI FNQQLKALEKKQHSFEENKAEQLHELTNDKLEKCMVVESDRDNQLTLLSE QLVALITSAKQRTAELKKQQTSDIKHLDPEGEVDKSIAKRVQLEKNLQQC SVFAQKARDYQSFINERYCHRDALVEENQNRKIIKRNLESNFEDSNIELT TKINDLKLLIRKNNQEKQATDDLLVQLNDNKRLCEMSAIESELSEQEPAN QADLTVSFCHDFYQQFKTIEKRLATQLNTFSERFRKDHSGSELFDNWQKL LLDNDSYSGAKALFKYREPISELLNSAEQKQQSTYQLVTVNATMINEFYQ HIENFGRRIKQIGKRLSTKVTALAHFEALADISVTTVMKQEELDYWGPLQ KFAEVFELYKDQLRDGLGDVPDDLVFAMQKLASYLPNEGFVLAHNNLFDL EFTIVEKGQVKHARNAKQLKKVSSTGLSYLAMLSLFAGLLAMLRGDSKHA SQIILPVDELGELAAENIDLLLQMFNDNHISMLSASPSTDRHILSLYHRH YKLKDNKIYHADIPQSRLDELLAQRNQTVTNAQEDKAGEPTNV >CPS_3353 methylated-DNA--protein-cysteinemethyltransferase MDNFESHRHYQVVEKAIQFINTNFDKQPTLLDIAGSVHMSEHHLQRVFSQ WAGISPKRFLQFITKQAALDALQNTNNLLDASHSIGLSGSGRLHDLLVTC EGMTPGELKGGGEGVMIQYGVCSTPFGEAILAWTLRGVCYLQFIKDKQQP VIDELYRQWPNASITPNREEAVQMGNGIFSSSIERGKIHLLLKGTNFQIK VWEALINTHSSQQLSYSQVSQLIDSPKSARAVGTALANNTIGYLIPCHRV IKNNGEIGNYRWGIERKTAMLAWERASLEESS >CPS_3670 protein kinase domain protein MIKRFLPIYHTGWFYLLLLFWGFSFWYASIGGLNQINLLNIQWLSQLESS PVLSDKKPTLNANDILTLHSEFNGQDIKSVTTLLSYYPNSQITLLGQQSS SFMNKLEAYLSSKPRNSKIVIGSSQVSSASPLKSQATMHFSPLLNWFRFS SKIDTELLSSKYFIFSPFLQSKRQTFPLIWRKDGMLYLTLPGEIIKQLSS NTELSIKQDWQLSLLTQVNTLAPKKYPLGFFGEVFISENLPRVNQINQER QERSETVLPKLSSVSQFIQQYSSSANTNSRPNYKVIFITDNNYSQDKVLK TLLGKLLQEDYVYQSLVIILFAWLLLLLGISLTWFIGQLSLKQQSISVLS YVVLLFILQYVFFNQGQWLEVPPIIISIMGTWLLLLAYQKEYKLFLAALN SQKTPYKETNEFLVPPNSTVESKVKSKIRAKLKSLLTNKRVKSPQVKHSS FLPEENTNAASHNQFPPINKPSPVSGNDIKQTLVIVDNPVTNTISTTHQT RVENFGRYQVEGVLGKGAMGIVYQGVDPKINRHVAIKTLQLSDDIDSPEF GEAKARFFREAQTAGGLSHANIVTIYDVGEDNHLGYIAMDLLTGAPLSLF TQADKILPTPLVYQLLIQITDALEYAHNQNVVHRDIKPANIIYDDDLLKV TVTDFGIAYVSDNSNTRTGIIMGSPYYMSPEQILGLKVDGRSDIFSLGVT FYQLLCGHLPFEGESIATVAYQITKAKAIAVNQRNTNLPTSAMRICSKAM HKDIDKRFQSMSEFKLALTNALKRDFKITAN >CPS_2305 hydrolase, TatD family MFIDSHCHLDRLNLSLHDNNLDNVIEAATAAKVTKLLCVSVTLADFPEMA AKTAHYDNVYLTCGAHPLNQKDAIIPEQLLALSQDDRVIAIGETGLDYHY APETKALQLDSFKKHIHVAKELNKPLIIHTREAQQDTLALLRSEGADQVG GILHCFTENWEMAEQAIKMGFYISFSGIVTFKNATALREVAALVPDDKFL IETDAPYLAPVPHRGKENQPAYVVEVAKHLASIRGQSVEEIAKLSTDNFN RLFKL >CPS_1896 ISCps9, transposase orfB, truncated MSVLSGEDHFYAWRRRPRSMRAINDADLLLNIKQVFNNNHQTYGSPRVFH ALKREGITTSEKRVARLMRENGLRARALKTYSRPAKVKFFYKAIKNNRKN ISKPDAINQQWSGDITYLKVGSRWYYLAVVLDLFSRRIIGWAFGQNKSTA LTLKALQLAIKKRKPTQPLLFHTDRGAEYRAHVVQQFLVKHNITASMNRP GCCTDNAEVESFFHSLKADLIRGNVFATTDKLHSKLKGYMNYFYNRQRLH SSLGYKTPAEFELAVN >CPS_2141 comE domain protein MNIQPKHLNKTLSVLTLGIILLVNSSLGLAKETNVTQAAQGQSAQSVKSQ VVNLNKSTFEQLVTLKGVGNTKAQAIIVYRQQVGAFKSVNELTKVSGIGE KIVSDNKARLSI >CPS_2418 putative ATP-dependent DNA helicase MRNPNIELVGVDKEIYSYLNLYNPKSFLLFAGAGSGKTRTLVNVLQEIKN NNLQTLIENGQKVAVITYTNAASNEIQHRLEYDPIFTVSTIHSFIWELIK PFTSDIKDFIKVKLRSDIDVLTTKISKARDKNGKTALANARSLKSKQKRL DGLAEVESFTYSPTSNKTSKGTLNHSEVIIIGSIFIADQKLMQSVLINRY PILLIDESQDTNKVLLEAFISVQENNKNKFSLGLFGDMMQRIYSGGKNDL TTSLPPDWETPAKIINYRCPKRVITLINNIRKGDDQNVQVPKEDAIDGFV RLFIVDSNTTDKLELENKIRFQMAMLTHDEDWNIAEEVKTLTLEHDMAAS RGGFDEFLLPLSSVSSLRDAALNGTSKNINFITSTLLPFIDAVEKDDSFE VARIIKSGSLLISDSNQSFLLNPIGTLKDIDSNVVEFKKILVNGKVTLHN VLSTIQKFELLSLPDELLVYLSDIEQGEPNEPESDTKLLSDVDKAWGLAL NSSIGHVKNYAKYVNETLGYATHQGVKGLEYKRVMAVLDDKFKGFLFDYE KLFGAKDLTKKDIENEDLGKDSALSRTRRLFYVICSRAEQSLAVVAYSND PIAIEKTAIESEWFSKDEIVLI >CPS_4237 RecQ domain protein MNNPQDYSHKECLKASLLETFGFDGFRPGQEQTITQLLKGQSSLSIFPTG SGKSLCYQLTALHLPHLTLVVSPLLALMKDQLSFLASKGIKAASIDSTLK GNEAQTVMAGVRDGDIKVLMVSVERFKNERFRQFIESVPVSMLVVDEAHC ISEWGHNFRPDYLKLPSYCQALNISLVLLLTATATRKVKQDMAAKFAIRD EHIVQTGFYRSNLDLSVLPVTQAHKNKQLEQIISAQQGAGIVYVTLQHSA ETVAQYLKQQGINACAYHAGFDSDTRSQIQQDFMAGKIQVIVATIAFGMG IDKSNIRFVIHYDLPKSIENYSQEIGRAGRDGLPSQCFTLANLDGLNTVE NFVYGDTPEFTGIEMLLNTIKSEVITSTHVGISDNRSEGKWELQILQLSN AVNIKQLPLKTLLVQLELAGVIEPLYAYFADFKIKLLKPKAEIINSFNDQ RKDFLQRIFNATDFKKVWGSLNFDTLLQDQSIERNRVIAALEYLQEQQLI VLETKGMTEVFNIKLNELADPSLCQTLSNYFKDNEEKEIKRIATLVRFFQ LDTCLTVNLARYFDDTSFDDKRFDGNSSDNNSLDSARNSGTVPQCGHCSV CRGQVAVLEHSQAQIPWPSDEALKQGMTELAERLSGKINQPLSIESFCRF FAGMSVPLFGRNKVRQLSGFGVCEQQRYQAILEKLASLSK >CPS_2917 site-specific recombinase, phage integrase family MARKVKPLTNTEVKQAKPKDKIYKLSDGDGLQLRIMPNGSKQWLLDYFKP YTKKRTSFSLGSYPDVTLANARAKRASSRELLAQDIDPKEHKEDHHREQL LIASHTLKSVAEDWFAIKKTTITEVTAKSLWRKFENHVFPKLGHRPIDKI LAPEAIEALKPLAAKGNLETTGKIIGHLNNIMTHAVNTGILHHNPLSGIR SAFSAPKVTNMPTIKPNELGKLMKVISYASIKLVTRCLIEWQLHTMTRPS ESAKAEWSEIDLENRLWVIPAERMKMRLEHKVPLTKQSIEILERLKPITG HRTHLFPSHINHHKHCNVETANKALIRMGYKNRLVAHGLRALASTTLNEQ EFNADVIESALSHVDKNEVRRAYNRAEYLDSRRELMCWWSEHIEQAVSGN LPVSTLKEQKIICNE >CPS_2408 conserved domain protein MCIHDFIYKLIYSKRQLELFKQWDNQDPISAQERAHNLRVIKAQGFGLNQ >CPS_3684 conserved hypothetical protein MTKASLICNKKNNIDLVLEPIKGGDTISTLSIKELIDASEFAKLRINNGN IKNAVAELNDVLKPLQDKKVGRTIRYQVLERVDAKISITIESDEMGATAE ITSAQGGKHLSAKAILNAAQEAGVKKGFSKEHLIQLAQLAAKQIPNSQID MQIATGKIAVNGKDALIQPLVESAQARILKPKKREDGSVDMRDLGDIICV NIGDAIAKKVPLTQGKQGYTVTATPLSPEPGNDVELVAGEGTNISPQNTN ILVSEKVGLPKLINNGMEVDEIYKIKNVTVATGNINFTGSVIIDGDVTEG MKVTASGDITVGGFVESATLEAGGDITISGGIIGRKHDVEKKHITNITMS VNISAKGSIYAKYGQYAQITCYQDVRIENQLLHSILDISGRLWIGKNEQA NGKLIGGYTKAGTSVHAGIIGATAGSNTIINFEHKILKFKDEIHQLEERL KIESDKTNELKVAINKLKKLPKEKARPELVAKIVPTYQYHANQMGEILNE KLILEDSFQGYIVSIYVEATEKLYHGVELIVGDYNDRSRREYGPSKMRYR ERKILIDPIVNT >CPS_4446 conserved hypothetical protein MARSPRLNLKDIPQHVIQRGNNRQSCFFENQNYQVYLDKLLEYSQKHQVE IHAFILMTNHVHLLVTPRIENGVSLMMQSLGRYYVRYINQTYHRTGTLWE GRYKSSLVDSDSYFLIVTRYIEFNPVRAEMVVRPELYPWSSYHQHALGKT ISLLTEHDCYLKLGDSASKRQQSYLKFCKRYLSDDEASFIRASVNKAWIL GDDRFKQQIERQLGVSVSPKARGGDRKSIKYQQSKG >CPS_0042 ATP-dependent RNA helicase, DEAD box family MAKRMTFSSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQ TGTGKTAAFALPILQQLISVQPCKPELRALVLTPTRELAQQVHKSFCHYG QFTDVTIGIAYGGVSTKKQISELKVGVDILIATPGRLLDLLRTESVSLSN IETLVFDEADRMLDMGFKEEIDQITQYLPKTKQTLLFSATFADDIYKMSK NILVEPKMVEIDEKNKAADDVEQLVYGVDADRKRELTSFLIGSRNWKQVL VFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRAL IATDVAARGIDIKGLSHVINYELPYNAEDYVHRIGRTARAGNSGLAVSLV SPGEEWLLTAIEELLDIQLLQQWLPGYELDLTKIANSNKRPINKKNARKD ALSAGDKSKGHRPNTRNRRR >CPS_2899 MutT/nudix family protein MSSNNSALTSDPNISNENDHGINQFKPNTTVAAVIHYGGKFLFVEEHEKC RVVFNQPAGHLEENESLTAAIKREVLEETGLRVEPDFLCGIYYFHRPDLK LYFLRFCFVVELEQWLKGQPQDDEIIDTHWLTLEQIKEKSAQLRSPMVLE CVEDYLAGNKIPLSQLKSNL >CPS_3121 ISCps9, transposase orfA MPRYTQPKKTWFYPVNFKIKAVELSLRNDMLSKDVAQALDIHPLMLSRWR KEYREGKFKKNQHYQSNSELMSKIPTKKELNKIKQLQKENDRLKMENDLL KKWQRYLAEVHQSDLDSSKNTKKP >CPS_1308 endonuclease/exonuclease/phosphatase family protein MMRYNYHSSLRRVIIISDNNKTEIDQSPSSETLSVSVANTQLKVATFNLF NYLEPPNAYYEFERIYSAEQWAKKQKWVAEYLSEFQPDIIGFQEVFSADS LKELVAAQGYAYFAVVDQPTVIDDFIYRSPVVAIASRYPITEVAAVKANT ELAQTLGLANDFSFSRKVIRATVELPHMGKCDCYVVHFKSKRSMIEIDEK KNHWSPEKTIIESLKANVAGGWGSTIQRGSEATLLMIDMIERREATGNPM VLMGDFNNTLDDGVLSHLLTNTLRFVSAIDRDAYLAKYCLNDAWDLLQTA IKNEQHEASKADEDSKNTSDIVEKNDTADTKNSSAREEQIVRTPTHYFGA DSSVLDYILLSCEFDASYHDSLYQVSAYDTYDRHLINPIFERDGESTDHG IALVTLTLRS >CPS_2634 extracellular ribonuclease/nuclease fusion protein MKTRKVVPSLFFGKNKLKLNSIALCVASSFVSYSALSAETLWSEDFSDPA LTNKGAVYETIDMDGVTRWSIDVTNAQLTANSDWFKVTNNKVEARDVDGS VDWLSEKIDIQGKQNINISVLAEESGTLESADFFDLSYSIDDAPFVKVEN WQGKGSSSHTLIDDFTSAAITQSIAEGSTLQIKASMANNSGSEYIRLDNV LVTSGVEDGGGDSSQGPVTDACYNCPDLSTIESAEDFVDATYYAAVFNAI DSVQSTEVIRTNINEVISANHKQLTYSEAWTALTVTDEDPMNPDNVILFY RGISKAKNSNGSGSQSTNPDNWNREHVWAKSHGFPSSSAMAYSDIHHLRP TDISVNSSRGNLDFDNSDAPLPEAPDNRVDGNSFEPRDAVKGDVARIVLY MDTRYAGLDSVTPDLQVVDTLTSGGEAKLGKLCTLLAWSEEDPVDEFEIN RNNKIYEFQGNRNPFIDHPEWISTLYSASCSEVDPVDPVDPVDPPATGVD LFFSEYVEGSSFNKAIEIYNPTNSAISLADYQFKLYSNGSLTATGTYTLT GEILANDVVVLGSSQIADDSLLVPFIDHFVSAVNFNGDDYVELVHGDTII DNIGTYGVRENWGKDTSLLRLSSITSGDTDRMDEFIKADQWQSNPKDTFE NLGSHLADTSPTDPGTGEDPVIGMCGDEADKINVIQGSSNDSTVIGEVKV IEGSVTSAVPSLKGYFVQEEADDTDADLMTSEAIFVYFNNIANFPTEGNK IRILGTIKESFGRTQLTATTDFIDCGVGESIEPTMVSLPVSSIDYWETIE GMSVSFNDTLKVSDTYNLARYGQLTLSNGRLILPTNIYNAGSEQAIDLAD KNSRNRITLDDMNNAQNPDNVPFPAPGLSHENTLRLGDSVTGLTGVIDYS FNQYRVLPTTTPLFSTTNVRTTQPDLNESGSLKVASFNVLNYFNGDGAGQ GFPTARGADTLEEFTRQSSKIVSALKEINADIVGLMELENDGFDSNSAIA DLVKQLNSQVGEGTYNYVSLDQTGVGGDAIAVGIIYKPATVGIVGNAVTT NQSPFDFGNRQPLVQTFKEIASNEELTIAVNHFKSKGSCGSASGNNLDQG DGQGCWNELRTQAANGLTAWLNTKPTGTSDDDFLIIGDLNAYGKEDPINA ITNSNYHNLVADYMGSTGYSYSFGGEIGYLDHALASDKLASQVVDTTVWH INADEPRIFDYNTEYKSSEQLSTYFAEDAYRASDHDPVIVVLNLLSEAEL IGDFDGDADIDRNDVTQFSMMVRRGETGDIQHDFNNDSVVNSLDVRALMS LCTRSRCATE >CPS_1685 ISCps9, transposase orfA MPRYTQPKKTWFYPVNFKIKAVELSLRNDMLSKDVAQALDIHPLMLSRWR KEYREGKFKKNQHYQSNSELMSKIPTKKELNKIKQLQKENDRLKMENDLL KKWQRYLAEVHQSDLDSSKNTKKP >CPS_0183 DNA repair protein RadC, n-terminal fragment MLKESRFKESALNESPLNQNALKNWPEMERPREKLVSLGSSSLSDAELLA IFLRTGVRGCNVVDLARQLLKSFGSLGAIFAASQEDFCARHGLGMAKYVQ LQACLEMSKRYLAENIKDIDCSLTSSQATRDYLLSELRLETREIFAVLFL DIIPVKTSYYFNLH >CPS_1251 conserved hypothetical protein TIGR00250 MSTKTKSPIGQRTVIGFDFGKKYIGVAVGQEMTGSATPLGSVKATDGIPH WDNLAKYLKEWQPDFIVVGLPLNMDGSEQQLTLDAKKFGNRIHGRFGIQV EFQDERLTTADAKEQLFARGGFKNLKKDNIDAESARLIIESYFEQQYT >CPS_0386 conserved hypothetical protein MELFTANESPEKLGIGKANILIQPNHKAYGQLNKHAYFSQSYADLHARPF PVSNVPLRVSQVCFLHQEGDSQAVELAHLHELCHRYSVNPPLANASCFYQ KMGEYEIRWERHTEFSSYTFLIHDSGLKPFDCPPVALVPIDWLEGISGEL IAAVHIDALSEGSVTLERDHLRQYFEGQRLMGSELHNGEAIILSALRLHE DNFNRILLVNTSLNECQSGRVLRALLEIEAYRNMTLLAFPLAQQVSIKVS KMESQLAMLLKKQKDIKSSNDEQKQLAELSAMAANIAEIIASSRYRFDAG SAYYEMVRSRLAELEEKDINELQTFSAFIDRRLSPAYRTVLAAKRRLDDL SSRVDRASDFLRTRIDMAIEAQNQALLTSMDKRAQMQFNLQQTVEGLSVI IMTYYVLALCKYLLDASSSLGYTFNREVALTLLMPIVLISVWMFSRRIKN AVQKIAP >CPS_2953 site-specific recombinase, phage integrase family MAEVQAVKDLDTVRLISHLLERRYSKQMRFVWEVGINLALRVSDLLSIKF TDFTDGRLIIKEGKTGKRAEIKVNPKTQMLINDIQLQHPHHVYLFQSYRN QRAINGPARPLTRRSVSKAFELVSEELNIHINSHSMRKTRGYHLYKKTND IARVMVMLRHSSESTTLRYIGITQEDVDRDFTELEL >CPS_3998 site-specific recombinase, phage integrase family, truncated MTKSLRKALNQTSIRKHVTAHTFRHSFATQLLLNGADISTVQELLGHNDL RTTQIYTYVIGQHSSGTTSPMDRK >CPS_3404 Snf2 family protein MAKNTFTPELLEKHFTKNEWKKGARIFQANGVKTCALDGEVIRGVVFSER SRESSYLTRLVFDGKFGDIASYCDCYVGRDCKHGSALAQCYIHEHFDRNS IATSETIIDKWLNRFQAQPTRYQPNTQQKSLLYFLKPNPYNEDDFLTLGI KSARPKNSGGWNSSIGSEYSASSLINSAYANDEDVAVLTELMRTNQYGDT IKYFDLFERIIKTNRSFWHTTYDLSEPVTLSEPLEAEWQWLALGNSLHTL KLVLMQPSESIRIIKAQPLCFYDEEKNCFGKINTNTQCDFEAGLLNSPIF EEDKLPWIMSKLSMSLGDAVKRLPKPKTKYSQELTQPDVYLHFTTPVASN RQTGYVQVNFSYQGNLVNPHDENVTITPSNVTKLSIDSDAQSDADSNIES GAYSNIEDEVERENVSPREIKIYRDLAFEQTVIDKLTTLKFNPQPKPKRY TYTSQDDLNKSKTPEFAMLMQGSVLWQRFLHQELSPLEDLGWHITFADDF YYKALSTDSVFDAEVMETDDHDFFSLGLNLTIDGKKMPAFPILLSAIEQL PRSALLDREKEDLISPDSPIYVDLDNGGFVALRYQSVQPILKQFIELFMP NALSHDGTIELSRFQGHQTLSMLDDQGMIAKGTSKLRALADKLKDFQQVT TIPVPEGLNATLRTYQHQGLNWLQFLREYQLNGILADDMGLGKTIQTLAH LLIEKQQGRLTKPILIVAPTSVIFNWANEIDKFTPQLSYQVLHGNKRHEQ FGCLEGVENGENQVDIIITSYALITKDLAHYTDRKFYYLVLDEAHYIKNT KTKLYQAFLTLKAQHKLCLTGTPMENHLGEFWAQFNFLLPGFLGGQRQFT KLFRTPIEKHGELERKQLLNQRIKPFILRRTKDKIATELPPKTEIIQTLR IEGKQAELYESVRLAMDSRLKDIIADKGLKRSQIEVLDALLKLRQVCNHP KLLKLEGAKKVNQSAKLDYLMETLPEQIDEGRKILIFSQFTSMLSLIEDE LIDAGIGYVKLTGSTTKRQEVVDKFQRGEVPVFLISLRAGGVGLNLTAAD TVIHFDPWWNPAVENQATDRAYRIGQNKPVFVYKLIIENSIEEKIQKIQQ NKAELAKALLSEEVSDNKLSLTDDILDSLLTPLS >CPS_3059 ISCps4, transposase MTKFSVYIGIDWANDKHDVCVQVANSSARKFEVIKHSPKSINEWITSLHK QYKGQIAVAIELSKGPIVYALQKFDFITIHPVNTSMLAQYRKAFSPSGAK DDPTDAELALDLMLRYPNKIKALKMDSESVRKLTYLVEQRRKLVDDKRRF SNRLIITLKEYYPHLLDWFSHRGSGIFCDFITRWPNLQKLKRARADTLKK FFGSYPGRTAAYSVKRIQSISEAEPLTLDNAVIESHQLLAVALANQLLVA VKVIKVFDREISELFNALPDAELYKSLPGTGPCLAPRLLVAIGENRSRFN SASEIQMYAVIAPVTVRSGQKSWIHWRYQCSKFTRQSFIEWATKSIRQSY WAEIYYQQQREKGNTHQAAVRSLAFKWIRIIYRCWKTKEPYNEAKYLKAL SDRNSPLLFKEKAC >CPS_2742 ISCps7, transposase MNTQINQNEINVGVDTGKTQLDIYIRPLGIYFTVTNDEDGIKTAMTEIKK HKVTRVVIEATGRLEQAFIMACAKAKIPFVIANPVNIKRFAGAINQKAKT DKLDAQLIAHYAEAIKPTLSQLKPEQIRLMSDLLSRRRQLMDMQTMEKNR LQIMPKEITSSIKPVLTVLKNQLEKIDNKIHKLIESCDEYKIKNDIIQSA PGVGKVVAFNLISEMPELGYINNKEAASLVGVAPFNRESGSYKGKRMIRG GRSQIRTAMYMAMMSAIQCNPTFKTLYQRLVAVGKPKKVAIIACIRKLVI TLNSMVRDGVYWDPKMN >CPS_0024 topoisomerase DNA-binding C4 zinc finger domain protein MSESEKPLFTQHEHALEKEYQVCPDCGSELTMKHGKSGTFLGCVNYPNCQ YTRAVVEHERVEDKILSGSECPLCSHVLAVKQGRYGMFIGCSNFPQCHHI EHEAQEIIQDVVCPSCKRGSLQEKTSRFGKKFYSCDAYPKCKFVVNHEPV EGRCEKCQFPLLLKRNMAAGIKYQCADKKCSHMQKI >CPS_3401 ATP-dependent RNA helicase, DEAD box family MTTVTTPATFTELGLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIA GANTGSGKTATFALPMLQKLREDISSGSKNSKGNFVTGLVLVPTRELAKQ VADSIKSYAVHFNGEIKTLAVFGGVSVNIQMLALRGGVDILVATPGRLLD LISSNAIKLDKVKTLVLDEADRMLSLGFTEELTALLALTPKKKQTLLFSA TFPEQVTTLTQELLNNPIEIQLQSADASTLVQRVFTVNKGEKTAVLAHLI QQEQWRQALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDG FKAGDIEVLIATDIAARGLDIEKLPVVINFNLPRSPSDYMHRIGRSGRAG EVGLAISLIDHEDYHHFSVIEKKNKFRLKREQVEGFEAAEITGDSILAVE KPMAAPEGTGKKKRKKKTSVNADIWSGYSKPE >CPS_4217 oxidoreductase, 2OG-Fe(II) oxygenase family MVNYYGEIMPLSESSYYFERLFNTIAWRNDQALVFGKIIETKRKVAWCAD TIDGKPFAYSYSGVTRYSIPFTEELLTLKKLVEQHSHETYNSCLLNLYHS GEEGMAWHSDGEADLKEQGAIASLSFGVERKFAFKHKCSKEVVALQLKPG SLLVMKGTTQQHWLHRLPPTKKVSEPRINLTFRTIDKPELK >CPS_2566 hypothetical protein MRRAALIKVGTLDCYLEASQNNNQIKVKQFAAKQVHDILTTDHNVVISGQ QKQTLLDQQETTPVLGTALLEAWLAHEQDSAIMISLYQQISARKTTTHLL THSFSQKQNPDFQAYIINQVDDAKVLEKLSKKACNHVLAQQIEDKLSAIQ VAIEKPQKLEKQIQLTLAKLQALKDVGDYGVYKTRKAQLINEWQTLALDF DVFTEEKSVVFSDKYQSIISQLEKLFIAKAENYQQQIISDKLSHDKQQDK KEFTQQLNHISQSITTAVFSSDKFDEDSFKELLRNLTTNIKASVLNKDEQ QNFISQVVQLSKRLNEIPEIAESVSQATHLISKISQLTLPKSLEELNDRQ QTYNDWLKAWRVIEKKTAGILPESIVQAQKEIVSTWQGGLKSLQSQQKEL FFQHKKKLQDIKRLLNNGKYKVCFGLFKGVKESIHHLSVQQLQQLQRDFD QVSEKMVELSDWEHYIATPRKQELLLAIQTLVETPLDNPNEQAKKVKEYR GTWNSLGHADEDVDKQLNEQFNQCCEQAFAPCRLFYAEQDKMRLQHLDQR QKILAKAELFVSQLNDSQETPKPDFKQLDGQLNNLQQQWNNAGEVDRNQY KKLQLKFKEAIAPIKSAISVFHASNITAKQALIAKAEELLASEDVLAAIE SAKQLQEKWREVGFAGNHQENQLWQKFRQVNDELFGKRQQFKSEQQAVLS TQQQVFIEQVLVIEESLGAVKDEDDKQVLQSIAQRAEMLLKDVIASKPVI KSVAARIEKISKQIEQLIKAKTQEKEQQTWSNLFELMSLQAQNNQELQAL QTSAVYNNMTSFWQKRFQEHVKLTKPAQNSARFDKTLEIEILGKSDSPVE LAEQRMKVQVQLMQEQMQSGTEIDLNKLLIDWLMLGSLVESDLPLIERLK TIYCQ >CPS_2416 DNA-binding protein MDLSIYFNMIFSAAWYLIPIFIFAIVIKSAWFKGILGEWQVNLLIKFFLN KNDYHLIKNVTLPTFTDGEEQGTTQIDQIIVSKYGIFVVETKNMKGWIFG SENQKQWTQQIFKHKSKFQNPLHQNYKHVKTLEDLLLTGSNAKNDCIFSV IIFIGDSTFKTKMPENVRFARGGIEFIKSKADVIFDRDEVINNIDKIENG RLERSFKTNRQHVKHVKEIVHKKTDTKSCSRCGSEMVLRKASKGKNAGNE FWGCRSFPRCRNVITAC >CPS_2062 site-specific recombinase, phage integrase family MTAWNKDKRVGQKKAFKLEEIWRIRIRLEIENQLEQLALFNLAIDSKLRS CDLISLKVRDISSASLIQSRAMIEQQKTHKEVQFEITPKTQQCLSQWVYL KRLSSSDFLFPSPRKLGQHICYHYYANIVKKWVSTLGLDITQYGTHSLRR TKASLIYAKTKNLRAIQLLLGHSKLQSTIEYLGVEIEDALSISESTET >CPS_1800 ISCps10, transposase MRDYRSLSHTGWDCKYHIVFIPTKRRKMIFGSIRKHLGEVFHELARQKCV IIEEGHLMPDHVHMCLSIPPKLAVSNVVGFIKGKSAISIARTFKGKQRNF TGEAFWARGYFVSTVGLDENMVREYIRNQEKQDVERDQLKLGG >CPS_0022 putative DNA processing protein DprA MINNSKSNIEYWLALKFVPRLAIHKKIALVETFGLIALFSLDNKPSVLSS ANNLSVKQLHAFHQPDWQTITHIIHASAACNSAIICYDDTYYPQLLKQIY DPPLVIFMQGNPLLLNAPQVAVVGSRAASVGGRDTAFKICQQLAQHNFII TSGLALGIDAAAHRGALSEPASTIAVVATGLDQVYPARHHSLAQKIIDSS GAIISEFVPGTQARAGHFPKRNRLISGLSLGVLVVEAELKSGSLITARCA LEQNRDVFAIPSSIENKQAKGCHWLIKQGAKLVEQCADIIDEFAFADKPS LHLKSELKPLKSATHSTHKGGDEINQKVLCNDALLDSVGFEITPVDKVVL RSELPVEEVLTRLTMLELNGLVSAVPGGYIRTQ >CPS_4987 conserved hypothetical protein MTHESFKSLYQRAADRKGGKLALELLLGKRILGKKLLDDNAAEESISQLT DDRVLAAFTKQIFKSGFVWRVVENKWPDFEEHFFNFNIEKMLMMPEEMLE RKAADPKIIRNYNKVKTIKANAQMMFDISLEKSISFAQFINDWPSEDIIG LWAYLKKHGQRLGGNTGPYALRLLGKDTFILSSDVEAYLRAQQIIDGGLQ SKKSLTAIQAFFNTLQTQSGYNLTQLSRLIAFASGDNYVQVEE >CPS_2858 ISCps9, transposase orfA MPRYTQPKKTWFYPVNFKIKAVELSLRNDMLSKDVAQALDIHPLMLSRWR KEYREGKFKKNQHYQSNSELMSKIPTKKELNKIKQLQKENDRLKMENDLL KKWQRYLAEVHQSDLDSSKNTKKP >CPS_1495 hypothetical protein MGNNTKKSIEQINDVSRQLLSRILVMQADSKILPQEQDLKNIKIQSIDDE NKELTELTEKRQILMTKLFEQNTADSISSESEVLEEMITLDSKLIANAKL SKQAITEKMIKIKKSKKVTKSYQKY >CPS_2946 SNF2 family protein MKIGVGSLVESESAFKGVGKVVSISSEKKSAIVGFFTSPLSPISNPIEVA GSELIGKSKLFEQTVVYCKVGKSENWRAGFYDGQRPNDEHLIKYNYNDSD VVPLEEVFVPNLLEGSQFCPANFLAGRATTSPMYINDRTSFFNSYLNQRA SCSSISSIPSSAVNLEIHQLSVVLQVLNDNVQKYLLGDEVGLGKTIEAGF LVREHILEYTDKACVLILTPPSLVQQWRGEMSQKFHLEDVMDEDLDEEDQ KVFIGSFQDILTSKFITKKPTMVVIDEGHQLGSFAWGDDNKGVFSQIASA CHNSISTIVLSGTPITGNTKNFLAMLHCLNPDSYQLNDDGISSFNNKIEE REKYSGIYGALVPESDDFTLEGIVEQVESFDFKDDELNFLIANLKPHIDY FSEEKDENQRKLAVKALQDYFGDKYRLFQRFIRNRRGSKNSYIEQIFPGL GDCNTSSWQIGDEFVSLDEQLDDYRNSLIHGDQNFAGITRENYFQWLDAL LISPSSLVAKAEAVLASNNTITNEEKLILTTMIEMGHVEQSNKDELLLEE ITSWLEKNTDGKIVVFCGDKTVADNVYKFIEQNLPSVERHIDGKLPGFNI SPQYNVLICDQSGEDGLNLQGKCRLAIHYSLPRTVMRIEQRIGRLNRYSA SSIGVLPVENLVLTPCREGFYGSWAQLLKTDIGVFNQNCSSIQLVLDEKI ESYCESIIHQGYTQLDKLSEEIEGESGLVAKERKKVADQEVWNGMQVDLS EIKTFSERLRIVDENADDLSKEMQGWINKSLRFDYRKTEDDNFVFQYQLG RTRLNVDDFVSHCILGMDFDSGLKNPSTKPMSASRDQSAKTGSYPFRYGQ PFVDTVYSFSQQTTLGISNAIIREINVALKEPKTFFKLNWICTLESGCHT RVSQRNNDRKLAPKILERWVDELGNEVTKEALVNILNKPYEKSRDLTKGL YRDYNISVGFEQDMWDAVDSFLSKDEWRDLVLSIASDSTEKIKSELNQQY DLSSREEFGVNLSTMRSVTLIGKS >CPS_1794 protein kinase domain protein MNDLYALFQKLALIEKPLQSNCFSQLENESPKKAQQLAQLLKQRNVSTGV LIEKIFSPLTFLDKPELRLGRIIDNKYKIVELIGQGGMSDVYKAIRCDGL IEHIVAVKYFSLADTFETALQMIKKEAQILAQLDHHYIASFIDIGYDDNG EPNIMMEYVQGQTLFAFLKTKPDETVLSQVYATLDEAKGYVVKQGVTHGD ISLNNVLVDKNGNANIIDFDIAQYKTQ >CPS_0900 site-specific recombinase, phage integrase family MKKIKKVQDGIWKTDSESKPYQIDFRPNGHHGKRYKKSFLTLGETRRFMN HLISENNGLKEWQPDTDDNRKLSTIIDLWHKLHGKNLIEEKALLQKLKNM CKGLNDPIARKLTPKVWVAYRAIRLEKVCAKTVNEDQNKIKGVFNELIRL GELKTNPLNGLKNLKYSAPEMGFFSKNEMMTLLNELKNSDNIDAYYISKI CLSTGARWGEAEKLLSRNLRDNFITFIKTKNGKTRIIPISDELKNEIPEK EGRLFSDSMKTFRTSLAKTGITLPKGQATHALRHTFASHFMMNGGNILVL KEILGHARIEETMKYAHFCKTHLHDAVMLNPISK >CPS_0475 dam, DNA adenine methylase MQINMRSPLKWAGGKKRVVGEILKVLPVKGKKRLVEPFVGGGSVFLNIDF DEYLLIDMNKDLISLFNIIKNQSTQFIADAQMYFAGDYNHPEKYYELRKQ FNESNDSYQRSVLFLYLNRHGYNGLCRYNKSGGYNVPFGRYKHPYFPKAE LDFFSKKAQKATFVQGDFEKAFSQLKSDDVIYCDPPYSPINRTSNFTAYA GNSFTDEDQIRLVACAEKAKQKGVATIISNHHVDFTRELYKNADKREFFQ VQRSISPKGQGRVKVKEVLALYK >CPS_1540 dbpA, ATP-dependent RNA helicase DbpA MSTNTTTSSLAFSSLSLKQDLVKNLSSLGYEQMTPIQAKTLPELLKGKDV IGEAKTGSGKTAAFGLALLNKLEVKKFRIQSMVICPTRELADQVAKELRK LARGIHNIKILTLCGGTPFGPQIGSLEHGAHVIVGTPGRLEEHVIKGTLQ LDNLNLLVLDEADRMLEMGFQAALDNIVGRTPLDRQTLLFSATFPDQIKS ISESIMTDPVMVKIASSEDQSTISQKFFKVGNDDDRLDALRLLLLGNQVE STAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSA SILVATDVAARGLDIDSLDLVINYHIARDSEVHVHRIGRTGRAGSTGIAY SLFSDKESYKVGLLEDYLEAVITPEPLPSLAVLSNERPQAKMATIQIDGG KKQKVRAGDILGALTGDNGVQGSQVGKISVLDNKAYVAVTKAALNLALKK ISKGKMKGRTFNARHLTN >CPS_1726 deaD, RNA helicase DeaD MTDQKTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLL AGKDVLGEAQTGTGKTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVA EAIESFGKDMKGLRVATLYGGQSYGPQFQQLERGAQVVVGTPGRLMDHLR RKSLKLDELRVCVLDEADEMLNMGFLEDIQWILDHIPKTAQMCLFSATMP PAIRKIANRFLKDPEHIKVAAVKKAKANITQYAWKVSGITKMTALERIAE VVEYDAMIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQM KSGKSSILVATDVVARGLDIPRISLVINYDLPGDNEAYVHRIGRTGRAGR EGMSIAFVRPREMYSIRHYERLTNGTVLNYDLPNIQDIGKIRIERTRVEV AKIVADKDISSMREIVEGMAAESEVSMIDLAAALLFQKQMKQPLQPKEDP KPRRDARERTDRNDRGNDRNSRGNDRNSRGNDSRSAGRDSRGGENRSNRD EKPRKAKVNRSDVDWQTYRLEVGKEHGARPGDIVGAIANEISLDSSYIGA INLHDKHSFVQLPKGIPTDLFNQLKGVRVRRQPLSITTSDEAVVSQQQRP ARRTEKAPRHT >CPS_1040 dinB, DNA polymerase IV MGNQKKIIHIDMDCFYAAIEMRDFPEYQNIPLAVGGDGPRSVLCTSNYQA RQFGVRSAMPAIKAKQLCPHLKIVHGRMDVYKETSKNIREIFSRYTDLIE PLSLDEAYLDVTDATMCQGSATLIAERIRADIFNELNLTASAGIAPNKFL AKIASDENKPNGQCVITPDKVANFVEQLSLKKIPGIGPKTFEKLNRHGYV TCADVRQSNIRALQNIVGKFANSLYLKSHGVDNRDLEVSRQRKSLAIETT LAHDISTQDECKLVIDSLYQKLLTRLAPHSNREIIRQGVKLKFTDFNQTT VETQSNECQQALFISLLSKAYSRSNKRGVRLVGLTLGFADSPGESQQLSL SL >CPS_2272 dinG, ATP-dependent helicase DinG MLSDKLKQAIRQAYKAIGENLTHFNPRKQQTLLIAEIAKTLAGEYSKDRK IITIEAGTGTGKSLAYSLGAIPLALARDKKVCISTATVALQEQLVDKDLP FLKKYAGLNFDFTLAKGRQRYVCRQKLTLAVTTGSGNEPAQAGFTFAEKP DAKDIRTLNKMHKALLDGSWLGDIDSWETHLPQHIWHQVQSDKHSCLKNL SEHTHCPFHKARETMDQAHVLVVNHSLLLADLELGGGKILSPPEDTFYII DEAHHLPKVTRDFSSASITLKGSIEWLTKLRDTGDKMAKLIKSKNAISPA LKLGDDCQDLLVEMQKVLNFIEANANVYFLENESSAQNNNFTKNSKNDEQ VYRFENGIIPQTLKNWAEDLQSLSKKSLSHLNKLYNGLIEAVKDGDTQMY VAEPLLAEAGFMLQRLENLQSLWFMYAKSDSDKGAPMARWLEKITLKRQD YLLSASPIEVGFTLENMLWSQCEGAVLCSATLRALNSFDHFRFQVGLKNN DGSQYQQVDSPFDYQNNSQLVIAKMDNEASAPEFTDEVIAKLPKYLKQGN ASLVLFSSYWQMNKVALALREDHKLEIMVQGELSRQQIIALHKKRCDDNK ESIIFGTQSFSEGLDLPGDYLNNLIITKLPFSVPTSPVEQAQAEYVTAKG GNPFMTLSVPDTSKKLVQACGRLLRNEMDEGVITLLDKRVVTKRYGKQLL DSLPPFSRVFEK >CPS_0001 dnaA, chromosomal replication initiator protein DnaA MDHSPWQRCLSVLQEELPAQQFSMWIRPLQCVINDNVMTLYAPNRFVLDW VRDKYVNRINELLTINESNNPLLLRFDVGSKPTIDNSVTNSPVSRNTGGN ESLFAKATSAPKVAEPESNIPKKTNVRLNYTFENFVEGKSNQLARAAASQ VADNPGTAYNPLFIYGGTGLGKTHLLHAVGNGILLNKPNAKIAYMHSERF VQDMVRALQNNAMEKFKQYYRSVDALLIDDIQFFAGKERTQEEFFHTFNA LLEGNQQVILTSDRYPKEINGVDDRLKSRFGWGLTLAIEPPELETRVAIL KRKAQESQINLADEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITI DFVREALRDLLALQDKLVTIDNIQRTVAEYYKIKIADLLSKRRNRSVARP RQIAMALSKELTNHSLPEIGDAFGGRDHTTVLHACRKVKSLREETHDIKE DYSNLIRTLSS >CPS_4361 dnaB, replicative DNA helicase MADKKPGKFSKERQFIKDKQIDELKVPPHSLEAEQSVLGGLLLDNETWDR VAEKAVAADFYSRSHRLIFETIGGLIELGEPVDLITLSEALENDQKLDDA GGFVYLAEMMKNTPSAANITAYADIVRERAVTREMISVANEIAEAGYDTQ GRSSADLLDFAETKVFAIAEKRANKNEGPESLNSVLEKTVDRIEKLCSTP SGGVTGVPSGYADLDKMTAGLQKSDLIIVAARPSMGKTTFAMNLAEHAAM TQEHPALIFSLEMPADQIMMRMLASLGRIDQTKIRTGQLEDEDWARLSST MGLLMEKGKMFIDDAAGLTPTEVRSRARRIHRDHGGISMIMIDYLQLMRA PQFSDNRTLEVAEISRSLKALAKELKVPVVALSQLNRGLEQRSDKRPINS DLRESGSIEQDADLIMFIYRDEVYHDDSEFKGMAEIIIGKQRNGPIGRVP LTFQGKYSRFDNYAGPHVLEED >CPS_1570 dnaE, DNA polymerase III, alpha subunit MLSGEIATEAEPSVFVPPKFIHLRVHSDYSMCDGLKKVKPIVAKAVELNM PALALTDQTNLCGLVKYYHAAHGAGIKPIIGCDFWVKSDELEDELSRIVV LTTNNVGYKNITELISKAYMRGHIQNKAVIDKSWLVEYKEGLILLSGGRE GDIGKALLKGNTELVDEMVSFYQQHFDRCYFLELVRTGRNDEENYIHLAV ELAEKENLPVVATNEVMFLSPNDFDAHEIRVAIHDGFTLDDKRRPKRYSS EQYLRSEEEMCELFSDIPEALANSVEIAKRCNVTVTLGEYVLPDFPTEGL EINDFFIKVSEKGLEKRLDQLFDRQADDFAEIRKPYDERLAIELEVVNNM GFPGYFLIVMEFIQWSKDNNIPVGPGRGSGAGSLVAYALDITDLDPLEYD LLFERFLNPERVSMPDFDIDFCMDRRDEVIDHVAELYGRDAVSQIITFGT MAAKAVIRDVGRVLGHPYGFVDRISKLIPPTPGMTLAKAFEEEPKLPEVY AQDSDVKDLIDMCRILEGTTRNAGKHAGGVVISPTTITDFAPLYCDDEGK NPVTQFDKNDVEDAGLVKFDFLGLRTLTILQWAIEMADAKLIKAGKEPID ITKIDLEDKASFKLLLASKTTAVFQLESSGMKSLIDKLKPDCFEDIIALV ALFRPGPLQSGMVDNFIERKHGREEVSYPDATWQHEDLQPVLEPTYGIIL YQEQVMQIAQVLAGYSLGGADMLRRAMGKKKPEEMAKQRAGFEQGAKDRG VDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKTHFPAPFMAA VMSADMDNTEKIVTLVDECGNMEIDLLPPDVNAGQYKFTVNSDNQIVYGI GAVKGVGEGPIEAIISARQSDGPFTDLFDFCARLDLKKTNKRVLEKLIKS GAMDSLGPKYVQGKAKEQGANRAALFETLPEAIKAAEQHAKAESLGQNDL FGLINDEQTDSRQTFKEVRAWPEEKWLDGEKETLGLYLTGHPINRYLSEI KKYSSSRLVVMQPTGRDRQAVAVGLVIGVRVLVNKRGRRWALVTLDDKSA RMDIRLFPDDYDRFAEMLVNDAILVCSGQVSFDDYSGGNTMTARDIMTIT DARENYLSSIDVQVDNSLIADDFIEQFTQVLTPFKEGTCPVRVFYQREEA QAMLELGVQWRVTPADMLLYELKTLLGEERVAMEFK >CPS_4335 dnaG, DNA primase MAGRISRQFIDDLLNRADIVDLVDSRVPLKKAGKNYQACCPFHNEKSPSF TVSQDKQFYHCFGCGEHGNAISFLMEFDRLDFVDAVEELASHCGMEVVRE ENTASPEEQRRQQQVYQQKQDDYELMSQISRFFQQQLKVASDKERAIDYL KARGLSGEVVKRFGIGYISDAWDGVMNSFSRNGQANQQLIDLGMAISGDK KRPYDRFRGRIMFPISDKRGRVIGFGGRVLGDEKPKYLNSPETRVYHKGQ ELYGLHEAKQANKQLKRLIVVEGYMDVVALAQHGVDYAVASLGTATTFEQ LQTLFRTVPDVICCYDGDRAGRDAAWRAMENALPLIRDGFSLKFVFLPDG EDPDSLIGTQGQQAFETIIDNAVPLSKFLFEQLMQKVDMSSLEGRAALVE SFQPYLSKLPDSILKDAMLNEIANNFGTGSEQFLAKFTKSIKSTAVKTAV KTRTKVTPVRSALALLLEHPHIANSLGDINVLQPLTVPGIPLLMQVLGIC QQNPDIKSPQLLESFRGTEQGTQLAKLMCWQHNVEADAATDVFLDNIEKL LNDFVEQRTEVLLQKARAGQMTAEEKQELQALLNA >CPS_0002 dnaN, DNA polymerase III, beta subunit MKFSLNRELLLKPLLLVSGAVERKSTLPILSNILFEVSGQSLTLTATDLE LEMVAYAEIQNQGDDGKITIPARKLLDICKSLPESSLISFEVIDETIKLS SGRSKYSLSTLPAVDFPNIEEWKGDVEFQLLKSEFLRLIESTHFSMANQD VRYYLNGMSIESEGNEIRSVATDGHRLAICKISNETLALPARQVIVPRKG ILEIIRLLAPVDEAVQVFLGSNHIRIIDSEFSFTSKLVDGRFPDYRRVLP RNGDKVFETNKDALRQVLSRASILSNEKFKGVRLNFSDTNLKITANNPEQ EQAEEEIEINFPYGELEIGFNVSYVLDVLSAIKDENVKFTLADANSSVVI EGSSNGEALYVVMPMRL >CPS_2255 dnaQ, DNA polymerase III, epsilon subunit MNNITDTQDSEKDKRLIILDTETTGINPREGHRIVEIGCVEMINRQLTGR TYHAYIKPLDQRGQVFQMEQEVINIHGLTNEFLADKPIFSQVVHEFIDFI RGAELVIHNSKFDVGFMDHEFSLFNSMGRSQDKVPMTEDICTITDTLKVS KDELGSPKTLDYLARFYRVDKLVDRTYHGALIDAQLLAYVYIEMTRKQSS FNLSSGDGTNADANAIRRVSSTRNKLKVIAASADELVAHTERVAVIGKKG GDPLWK >CPS_3744 dnaX, DNA polymerase III, gamma/tau subunit MSYQVLARKWRPKNFQQLMGQEHVVNVLANALSQKRLHHAYLFTGTRGVG KTTIARIFAKSLNCELGITDKPCGKCDACIDIDQGRFVDLLEIDAASKTK VDDTREILDNVQYAPSRGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHV KFILATTDPQKLPITVLSRCLQFHLKALTVKQIEDKLAEILSHEQVSHEQ GCLTLLAKAARGSMRDSLSLTDQAIAQGQGHINLTNIQQMLGGIDQNWVY QLVITLLKQDSQALMTLSQEIASYAPSYSRLFAELIQLFHQIALMQIVEQ PFDLPADLLALLKKFSQAMSAEDVQLYYQISLNGRKDLPYAFDEQAAFDM TLLRLFAFKPMQKSQLTNESTIDNIEQNTAISFDDDNLSKTTETLSNNAD IAKAAVTEAVVESFAEVDISDSAAATDNTQQTELNEQMLAIEQQADELKQ SENNSLNQTPAQHVVSQEVKAPQQVPVVESYKEKQNTAPIVPNEQVGQLS IHSPVGSVLATRNMLRSRKKELEKQTKKSSDATLRQPNRADNSKNKTQDS VNATVKPQVVSTESLVIAPEPDLPFHQDSIDPAKVTKANQVDKWAHMIDS MQLTARIRQLAIHATISEKSTDDNLILKLDQATRHLSTEIAHQHLQSAIC EFLARQITVTLDIVEETVADPYQIQGQINDKRLEYAKTLLKEDAVVIALQ ETFQASLNEESISPR >CPS_0551 fis, DNA-binding protein Fis MFEQNVSSPFITGDIQTQTKTSPLRSQAKIAISNYLSQLNGNDVDDMYDL VLSEIEAPMLEEVMMYTRGNQTRAANLLGINRGTLRKKLKKYGMN >CPS_2331 gyrA, DNA gyrase, A subunit MSDLAKQIVPVNIEDELKTSYLDYAMSVIVGRALPDVRDGLKPVHRRVLF AMDVLGNDWNKAYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY MLVDGQGNFGSVDGDSAAAMRYTEIRMSKIAHSILADLDKETVDFVPNYD GTEHIPAVMPTRVPNLLVNGTSGIAVGMATNIPPHNLTEVINACLALIDN SELTFEEILEHIPGPDFPTAGIISGRAGIEEAYRTGRGKIKIRARASIDV HETTGKETIIVHELPYQVNKARLIEKMAELVKDKRLEGISALRDESDKDG MRMVIEIKRGEVGEVVLNNLYKLTQMQVSFGLNMVALTNGQPKIFNIKEM LEAFVLHRREVVTRRTIFELRKARDRAHILEGLSIALANIDPIIEMIKNS NNRKESEEKLISQGWELGNVANMLSEAGNDAARPEWLEPEYGIRDGLYYL TAEQAKAIVDLQLYKLSGMEHDKILSEYKALLDLIAELMHILATPARLME VICEELVAIRDEFGDERRTEITNASHDLSLEDLITEEDVVVTLSHEGYVK YQVLSDYEAQRRGGKGKAATKMKEEDFIERLLVANTHDTILCFSDRGKLY WLKVFQLPLASRTARGRPIVNILPLESDERITAILPVRDYADDKYIVMAT ASGTVKKTRLDAYSNQRANGIIALNLRDDDTLIGVDITDGTNDVMLFSDA GKVVRFNEKVRDSETGEIKLDPETGEQRWALKPIGRTGTGVRGIKLEGEQ KVVSLIIPKNDGPILTITENGFGKRTDLAEYPAKSRATKGVVSIKVSERN GKVVGAVQVEDLDEIMLITDSGTLVRTRVNEVSVIGRNTQGVRLIRTADD EHVVALQRIDEIEEPAELEEVAEGDEVIETSVEPSSEDNPEHSAQQDVAD TSQDDNQE >CPS_0004 gyrB, DNA gyrase, B subunit MTVENEYSSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVLDNSI DEALAGHCTDIIVTIHLDGSVSVQDDGRGIPTEIHPEEGISAAEVIMTVL HAGGKFGGEDSGYKVSGGLHGVGISVVNALSEKLKLNIRRDGKLFEQFYH IGVAEAPLAEVGVSDKTGTEVRFWPSTNTFTDVLFHYEILVKRIRELSFL NSGVSIRLIDEREEGKEDHFHYDGGIQAFVDYLNTNKTPVNEEIFYFDLE REDGIAVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLSGFRTALTRTLNS YMTKEGLNKTKKGGATETSATGDDAREGLTAVISVKVPDPKFSSQTKDKL VSSEVKTAVEQAMGEKLGEYLLENPSIARTIIMKIVDAARAREAARKARE MTRRKGVLDIAGLPGKLADCQEKDPALSEIYIVEGDSAGGSAKQGRNRKN QAILPLKGKILNVEKARFDKMISSQEVGTLITALGCGIGRDEYNPEKLRY HSIIIMTDADVDGSHIRTLLLTFFYRQMPEIMERGHIFIAQPPLYKVKKG KQERYIKDDDGLTEYLTTLALDNASIHVNEDAPAITGAALEQLVNQFRNT MDIIKRLSRQIPADILEKMVYSSTISADDFADEAKVNAWAKNLITQLENQ DGNGSIYKIEVKYNQERNIYFPNFIVRKHGIDKEYHCSYEFIQSKEFASI MALNTSINDLMEEGAYVKRGDKVNPAANFEDALEWLMAESKRGQYIQRYK GLGEMNPEQLWETTMDPETRRMLQVTIEDAIAADQLFTTLMGDHVEPRRK FIEDNALKVSNLDI >CPS_2454 helD, helicase IV MHFYKTNVVLMSSNPQTVVDSIEQLSDYCIPSSFFRRFIGIPTAIKISDC GVVIDVEDSLTTIKWEELIVPPTFHLSFFGQIISFKTESKSYVFTMLAYK SKRKHKNNCEQRWAAANIHRVETLLTAIERFKTNRYMRRSIIERIQLASR QELVRWLPWLNSNSSSKSTSSLTNVIEITQRLSYYQHWQQQGIADCRESY ISKQLQTHEAFFDNVESNPLTLCQRRACIIDNDNNLLLAGAGTGKTSVMI GRTGYLLNSLQAKSDEILLLAYGRKAANEMDERIRDKLSTDKISATTFHR LGLSIIAQVEGGKPSLSVLADDEKAKSKWIQSYFERLIKEDRQYRKLILE YFGKYYYVERSAFDFKSKGEYYQYLTDNDIRSFKGEQVKSFGELYIANSL FSYGIEYQYEAKYAYDVKSIERKQYQPDFFLPEFNVYIEYYGIDENEDTA PYIDKDEYHEGIQWKRDTHNKFNTVCLEFTYAQHKTGQLLSALKASLIEL KNRSDLSPADSFPSEKTPSELMSSEHISAELRPIELIPSDVILATLNESG RITELAKTFTQLVGLYKAACLDTTLDCTLASSLQNSIIANSVEPKQTEKA LALLKPILSAYEQHLAQHHEIDFEDMINKALTYVQAGQFKSPWRYIMVDE FQDISEPRARLVKALRDNNKECSVFAVGDDWQAIYRFSGADVTLTTQFSN YFGSTTQSELDQTFRFNNQIGKVATDFISKNPAQITKKITSLKQVNAPAV SLLKRDNSQFRSRKTGLIDEMANGAIDDVLAAISAKVCKPVTVYLLARFW FFLPSNIDLNRLNNQYPLLTIDAQSFHTSKGKEADYVIIVGLKKGAHGFP SEKVTPALNEALLAKKEKFPYAEERRLLYVALTRAKDRVYIIADMTESNP FVKELVNDHQIELNEFECTATQSLVDDLHCLACKTGLLKKRTGRFGTFYA CSNSPRCEHKEKPCAKCESPMTRKRYPGFKTCLNDLCKSLIPTCSLCDAE MVLRTSKKGEFWGCRNYKGNDPMSCKNGVDNANVNWPELVVD >CPS_4519 hepA, RNA polymerase-associated protein HepA MPFQVGQRWISDSESDQGLGTVTGVEHRFVNIVFTATGESRKYAKDNAPL TRVIFNKDDLIPSHEGWSLKVISHSEAQGIISYEGIRQDTNEQIILKEVM IDHFIKFNKPHDRLLNSQVDRLDWFRLRKDCLQHQYQQQQSDLTGLTGGR VSLIPHQLYIADEVGNRFAPRVLLADEVGLGKTIEAGLIIHQQLVTGRAK RILIIVPESLMHQWLVEMLRRFNLNFSIFDNERCVETSQDNYVDGKKANP FSSEQLVLVNLGFITNNPQWFDALVSEDWDLMVVDEAHHLNWQQDKPSIE YQCIEQLAQVIPGVLLLTATPDQLGHESHFARLRLLDADRFYDYQKFTEE ESHYSEVADAANALVEGKPLSSEQETTLSDLLKETDISIQLTELNQADSK ESAKVRQGLLKQLLDRHGTGRILFRNSRNTIKGFPARQVVPTVLIMPEQY QENINEFMLSDCPEALAKSKQAKYIFTPEMLHGLDQRNDTWTDFDPRVDY LIDLLQSLKREKVLVICANAQTAIDLEAVLRIKEGIRSAVFHEGLSIFER DKAAAYFAQDEDSAQLLLCSEIGSEGRNFQFAHHLVLFDLPSNPDLLEQR IGRLDRIGQTEIIRIHVPYFADSAQQLLFDWYQQGMQAFEHTCITGRVVF ETFGEQLLSLALSCQQQSVEAESLISDSWQKHLSIKAELESGRDKLLELN SSGQGRAHELVEKIQQVDNDINLPQFMFQALDVFGVQQDDKADNAIALNQ SEHMLNSNFPCLPEDGTTVTFDRETALVNENYQLLTWDHPMVRGVMDLVL SDEIGNASIGLLKNEALPVGTFFLECLFTVEATAPAHLQLGRYLPTTPIR ILVDKNGNNLADKVSEKVLDKQLSPVKKQMALQLIKALKTQITPLVAKAE IHGEQHIVEIQKKSLAAMQSKLSLEHHRLTALKAINPSVRQEEIDFISQQ QDELSHYIDKAQLTFEAIRMIVVTH >CPS_1720 holA, DNA polymerase III, delta subunit MKIYHNQLDNTLRQGFKPVWLVFGDEPWQKDNSLAAIKNNAKSQGFSEII RFSSDTAFDWQQLLDEYQSLSLFASQRIIEVELTTVKVGDAGNKALLALA ERLTQDINSGHVPQDVIFIFHGAKLDAASANRKWFKSLTQLGCYLPLYDI ELKLMPQWLNNQARQLKLNISPELNALLIELFEGNLLALAQELDKLVLLF GSQTISVEQAEQLIIKQAKFNPFQVIEVLLRGDCAKCITMLDQLQQEGMA PAQLIWVFHKEINQLYAMLNQLAQGESIANIYKQYRIWDKRKPLYQHALT HIKLDNVKRAMMRIADIDLLSKTSSEFNIFILLADLCITLYHGEKTAAFS LNYG >CPS_2303 holB, DNA polymerase III, delta prime subunit MLQICHEKQVQLSRQYQQDTLAHAIIIQGIEGAGQGALAKWLIELLICQN PLSTTNAAGTETISEACGQCKACLLKKSDNYPDHLLLKSENKTLGVDDIR RGNAFLEKTAHLGKVKTILIPQAQVMTIAAANALLKTLEEPSANSYIVLI TDDLDSLLPTIISRCAVYAIRPMIGEALLAQLKVSNLGDVQLSSSAPLTN KANDTAYINLSHLPELTDKIVHQEFQVFNQYLLDYLLHGQSEEKLLSQIV DNKYSLRWLEKITCNLMREYYLVNATDQTLLLIKQKISVQVLNQIYQAII TSNKLIKSYLQANRQFVGEQLLMTINDIVRP >CPS_0739 holC, DNA polymerase III, chi subunit MMQTQVMFYLLKDDVTDEKEEDTRSAIYHACLQASHFYRQNQRVYIYAKD QQHAEQIDEMLWAFDSDSFVPHNLVGEGPKQGAMVEIGYQAPQGRRPVLI NLNSAVPNFANQFQFIVDFVPSDETLKQQARERFKTCRQWGFQVDNQAVT VPEEVSK >CPS_4302 hrpB, ATP-dependent helicase HrpB MSMTVTTYLPIEAIKQQFCQSLDEQNTLILSAPPGAGKSTCLPLWLLTLP SLANKKIYLLQPRRLAVKNIATFLAAQLKEKVGETVGYRLRNDSKTSTST RLEVITEGILTQIIQKDAELLGTALVVFDEFHERSLQGDLAFALTREVQT ELRDDLKILLMSATLDIEYLSQALPDAYLLNSEGRSYPIEVSYQAPRAHQ RWREHALAVIKDKMYNHIGSILVFLPGVADIRFLLDSLMAQKVEGVKICP LFGELSLKEQQQAIAPCLSGHRKIVLATNIAETSLTIDGIDLVIDCGLEK VAVFDSASLMNKLMQKQISKASAVQRAGRAGRLMHGQCIRLYGKDDFERR PLHSVNDIQQADLLPTLIEAARWGVTALAELPLLELPSKAKEQQAWQELQ SLDIVDDKYLLTKHGEKASCLPCHPRFAHMILMAQTQGPNITLLACLIAA LLEERDILKGEQAKYDCDLIHRLQLLIQHKSNKNPLLERILQQASRLAQN VQLRFRVHDLDLAKTGVLLAYAYPERVAKTRGNHGDFICVNGKGTLVNEQ DALAGEDFIVIAQTSQLGGQLTVRLASQISLEEITNTFAAQIKQQDIANF DNKSGRIIAKRQTSLGAIVLSDQPLKQEVTAESISAMWCSLVMKKGLSFL SWQAKDLALKARWLWLNKYFPEYDLVVIDDELLLAKLTTWFAPFVGGIKT KAQLDKLDLSSMLLSLLSYQEQKILKQAAPTVYVGPTGRHCPISYSQDES PKVSLPMQELYGLTITPNVGAIAGISEQNQGIPLLLELLSPAQRPIQVTQ DLVKFWSGSYQAVQKDMKSRYPRHYWPDDPVNAKATNKMKRHIKE >CPS_1873 hupB1, DNA-binding protein, HU family MNKSELVEKIAEGADISKASAGRALDSLIGSVTTELANGGDVALVGFGTY KVNDRAARTGRNPQTGAEIQISAAKVPAFKAGKALKDAVNV >CPS_2063 hupB2, DNA-binding protein, HU family MNKSELIAKISEGADITKASAGRALDSLIDSVTTELASGGDVALVGFGTY KVNDRAARTGRNPQTGAEIQISAAKVPAFKAGKALKDAVNG >CPS_3781 hupB3, DNA-binding protein, HU family MNKSQLIEKIAAGADISKAAAGRALDSFIGAVTDELKDGEQVALVGFGTF SVRDRAARTGRNPQTGATIQIAAAKIPSFKAGKALKDACN >CPS_2994 ihfA, integration host factor, alpha subunit MALTKAEVAEHLFEKVGLSKRDAKDMVEIFFEEIRETLESGDQVKLSGFG NFDLRLKSERPGRNPKTGEDIPISARKVVTFRPGQKLKSRVEDGNSD >CPS_2336 ihfB, integration host factor, beta subunit MTKSELIEKLADKLSHLSAKEVEKSIKEILELMAQSLSKGERIEIRGFGS FSLHYRAPRVGRNPKTGESVELSGKYVPHFKPGKELRERVNLSVA >CPS_0117 kdkA, 3-deoxy-D-manno-octulosonic acid kinase MSQTITSAQFSKFEQGNVTCVYNQTLITNFNAAMLSPSYWQQSNAVTGSA QGRGTTWFVEYNDNSNTPHDWVLRHYYRGGLIGKIIKDSYWFSGVEKTRA ACEFALLRHMNTLQLPTPEPIAYRVMQHGFHYQADLLSSRIEHAQDLVAI LSEKALTDDIWHNIGATIKRFHQHGIYHHDLNSHNILLNDKKQVFLIDFD RGELRTNPVETNWKQANMARLQRSFLKELNKLEQFNFTEQNWQALKDGYQ DADVERQN >CPS_4404 lig, DNA ligase, ATP-dependent MNKYVLRIFFAFILSVHLSSTAQQTTQKTQKFKPNIQHGVSYQKVDDISQ YYVSEKLDGIRGYWDGKQLFTRRGNLINSPSWFTQHWPTYPMDGELWLAR GQFQLLLSCATKRIAVENKTTSCWRSVRFMIFDLPKHLGDFNERVIKMRT LLVQNQSVYLAMIDQVKLEELSALDHKLDEVIATHGEGLMLHLASAHYQQ GRNPALMKLKKYQDAEATVIGYTEGKGKYQNQLGAIKVKTSDGIIFKIGS GLSDIQRANPPKIGTIITFKYNGLTQAGIPRFARFWRIKASG >CPS_3466 ligA, DNA ligase, NAD-dependent MSNVEKKISQLQQQLNQYNHEYYVLDQPSVPDAEYDRLMTALIDLEKTNP ELKTIDSPSQKVGGQALKSFTQVTHQLPMLSLDNVFSLDDFHAFVKRVKD RLNDNQAIVFCAEPKLDGLAVSLRYEHGQLIQAATRGDGSVGENITTNIR TIKSIPLKLMGTPGKDFPDIVEVRGEVFMPKASFDALNTLAKKRGEKGFA NPRNAAAGSLRQLDSKITAKRNLAFYAYSLGFVGKLSDGGAESTDLTNDF FANSHHERLCQLKRLGLPMCPEVRLLESEQACDAFYQDILAKRSALSYEI DGTVLKVDEISLQKRLGFVARAPRWAIAYKFPAEEELTCVEDVEFQVGRT GAITPVARLKPVFVGGVTVSNATLHNQDEITRLGLKVNDFVVIRRAGDVI PQIVSVVLDKRPDNAVDIVFPTSCPVCDSAVAKPEGEAVLRCTAGLFCAA QRKEAIKHFASRKAHDVDGLGDKLVEQLVDEKLINTPADLFKLTEIQVST IDRMGKKSATNLINGLEQAKSTTLAKFIYGLGIREVGEATAANLANHFYT LAAIESASLEDLQNVSDVGEVVAKNIINFFKEEHNLAIVSGLSEVMHWPT IEIKSAEELPLAEQIFVLTGTLTQMGRTEAKTALQSLGAKVSGSVSKNTH FVVAGDKAGSKLTKAQDLGISVLTEDGLVALLAEHGITI >CPS_2139 mfd, transcription-repair coupling factor MSKASSLLTPVLAKRRGKNPDKKSWHNLHGSSSSFALYQAAKTAQTPILL ITSNTPQALKIEQELLSLAKSDSQNKANICLFPDWETLPYDNFSPHQDII SQRLATLYQLSRMESGIIIVPVTTLVQKLAPKQYIEANSLIIKQGDKRDL HQMRQALEASGYRNVDQVLEHGEFSARGAILDLFPMGSNKPFRLDFFDDE IDEIRLFDPESQRSKEKIDEINLLPAHEFPIDEAGISLFRSQFREQFQGN IHKESVYHKVSNGILPPGIEYYLPLFFDNKQDTEKEGATLSNTLCDYLTD NTLVVISGDIEHSLTQYWLDIEYRYENRRYDPTRPLLPPEQLFLTADTLY SALKPFDRITIAKQTKIETIKTQRSDNQASEDLVTAEVDAETSAEVKSKS SEICFDVKPLPDLTINHKLKQPFELINQFIASKETPNKVLFVAQSQGRRE SVLELLERDNIRPAQFDNIDDFINATDTLGITVNSLTQGFAFQAKGNSQK NAIALVTEAELLGDHVSQARRRTKAQDLQADALFKNLAELTIGQPVVHIE HGIGRYLGLQTIENGGIVTEFLVLSYANEAKLYVPVSSLHLIGRYSGADS DHAPLHKLGNDTWSKAKQKAAEKVRDVAAELLDIYAKRASNHGYSFKRDK QDYQAFSDSFGFEETFDQKQAINAVVSDMLSPKTMDRLVCGDVGFGKTEV AMRAAFVAVNDGKQVAILVPTTLLAQQHYENFRDRFANWPVVTEVLSRFK TPKEQKEVIARVESGQVDILIGTHKLLQNSIKYKDLGLLVVDEEHRFGVK QKEKIKQLRSNVDILTLTATPIPRTLNMAMGGMRDLSIIATPPAKRLAVK TFVREHDEALIREAVLRETSRGGQVYYLHNHVDTIDKTAADIQKLVPEAR VVTAHGQMRERELERIMSDFYHQRFNVIVCTTIIETGIDVPSANTIIMDR ADHLGLAQLHQLRGRVGRSHHQAYAYLLTPHEKRITKDAKKRLEAIASLE DLGAGFTLATHDLEIRGAGELLGEDQSGSMCQVGFSLYMEMLDQAVAALK EGKQLSLDQVMSTQTEIELRVPALLPDDYIFDVSLRLSLYKRIASCKNKN ELDDIQVELIDRFGLLPQPSKNLVQIAKLRLKAQTIGISRIEASATGGSI EFSNDTSVDPMLIIGLIQKNPAVYSMAGASKLKFVKANDDTQKRFTLISN ILNDLAK >CPS_3626 mutH, DNA mismatch repair protein MutH MNIPSSEQALMHNAQNLAGLTLGDLAKQAGIVIPKDLTRNKGWIGLLLEH VLGASAGSRPEPDFPHLGIELKSLPINEQAKPLETTFVSVAPLTGLVGVN WHNCYVRKKLARVLWVPVISPKDVPISERIVGTPFLWSPNAEEEALLAQD WQELTDMIVLGEVENIHGKHGQVMQLRPKAANNKARTQAFDRNGKPFMTL PRGFYLKINFTQGLLHRYLRIN >CPS_0323 mutL, DNA mismatch repair protein MutL MTIAILPARLANQIAAGEVVERPASVIKELIENSLDAGATSIHIDVDKGG IKKIKITDNGHGIVKEELTLALSRHATSKIKSLNDLEAIGSLGFRGEALA SISSVARLTLTSKPQSQATAWQAVAEGRDMSVNIKPAAHPDGTSIEVLDL FFNTPARRKFLRTEKTEFNHIDEVVRRIALAHFEVSFSLTHNGNTVRQYR MASTHAQCIKRVAMVCGPKFIEHAVEVDCPHDNMTLSGWLAKPSFSRSQN DLCYSYVNGRMMRDKLINHAIRQAYADLLPPDTYPAFVLFLQLDHREVDV NVHPSKHEVRFHQSRYVHDFIYSVCHKALTSALAGEELFTTADSDLALVP EQSYSSLGANDRQGSHSSNTPTLNYPSADYIRPLQHVNDASNSQSTSSYS GYGQQHKTNAISKIAASNYQALMTPDKGSSAQVQNTSGSDQASAQKHETT TLQNSTDQSAFLSVHQPGYALYKTENGVRVLSLFKLAKSTYGKLVEQSWQ NKTEQSDCPVECLVSQPLLLPVILSLSEQQLSFVLAEQEILSNAGIVFIQ QHKNKIQIRQFPALLREQDVSNALIIIIEELIEKRSFTEGEALCETNLHQ SIGLAMVLAEYDETQADILLRLTKKLFHEQLSQQLLLNSIPLDLTSHIKT LF >CPS_0212 mutM, formamidopyrimidine-DNA glycosylase MPELPEVEVCRLGISPHVIAQEVSEVIIRNKRLRWPIPDEVCSAVGLPVL KVERRAKYLLLRFSTGTLLLHLGMSGTIRVIEQDTPVAKHDHFDLVFKHG KSLRLNDPRRFGAVLWLANDEDELGLLAKLGPEPLSDDFAEGYLFSKAKN RKVPIKTFLMNNHVVVGVGNIYANEALFQAGILPTAKAKDIDEHRMNSLT AIIKKVLSAAIAQGGTTLKDFTQADGRPGYFAQSLMVYGRAGEACVTCKT KLQEIRQSNRSSVFCPSCQQD >CPS_4137 mutS, DNA mismatch repair protein MutS MTTATKDLSSHTPMMRQYLTIKAEFPHTLIFYRMGDFYELFFDDAKKASD LLDISLTARGKTGGNAIPMAGVPYHAAENYLAKLVALGESVAICEQIGDP ATSKGPVERKVVRVITPGTVSDEALLVDRQDNLIVAIVDNQSPNAKLKTS SAPAFGLAYLDMASGRFVLTEPQTAEQLQAELQRLSPAELLYSESLQDFS LIEQRKGLRRRPEWEFDLDTAISLLNKQFDTKELTGFGVDDKPLGLAAAG CLFQYVKDTQRTALPHIRAIVCESANKGVVLDAATRRNLELTQNLHGGLD NTLAAILDKSSTPMGSRLLKRWLHFPLRDLTVLNNRQNTVSDIIALDLIA PIQPLLKGLGDIERIVSRIALGSARPRDFARLRHALQQLPELQNELKSGL TESPTNYLATIAQQSQPMPQLEGLLVHAIVENPPVLIRDGGVIAPGYNNE LDVLRDLSDGATEFLAQLEQREKERTGIHSLKVGYNRVHGFFIEMSRTAA VDVPDDYIRRQTLKNNERFITEELKQHEEKVLSAQSKFLALEKSLYQELF DKVLPDLAQLQQLSQAIAELDVLTTFAERALALNYVKPSLVEEPGISIDA GRHVVVEQMTNDAFIANPVLLTEQRKMLIITGPNMGGKSTYMRQTALIVL LAHIGCYVPADNATIGLVDRIFTRIGASDDLASGRSTFMVEMTETANILH NATDKSLVLLDEIGRGTSTYDGLSLAWACAEMLALKTKAFTLFATHYFEL TLLAGQISTLANVHLDAMEHDDNIVFMHAVQEGAASKSFGLQVAQLAGVP KTVIKRAKQRLSELEQQQTPSILPAPIQNDAFEQLSFAPEEHSVVTTLID TDINELSPRQALDLLFSLKEQL >CPS_4453 mutT, mutator mutT protein MSKVVHVAVGVITRASEDEACQYFLTKRLEKAHQGGKWEFPGGKVENNET VAQALARELKEEVAIDVLSCQPLIKIEHTYRSKEGDEKGDKSVCLDVFIV DNFTGEPSAQEGQGQGWYTLNELEKLDFPEANKTIIDKLVERSL >CPS_4148 mutY, A/G-specific adenine glycosylase MNNPIVISAKSAEQFGQQVVSWYHLQGRKHLPWQQDKTPYRVWISEIMLQ QTQVATVIPYYQRFMESFPTITDLANADEDVVLHHWTGLGYYARARNLHK SAKIMLNDYDGHFPIEIEQVIALPGIGRSTAGAILSLSLKQYHPILDGNV KRVLARSYLVEGYNGLSKFDKALWQLSEKLTPAIETDSFNQAMMDLGATV CTRSKPSCDICPVEQSCLAKAGDQQMNFPQKKPKKKIPEKQTIMVIPRLK NENCDKVLMEKRPPVGIWGGLWCFHEVDELSEINDLMTSLSLKEISSQTL TEFRHTFSHFHLDITPVVVDCQQLEVSKINEPNQQKWYDLHQGLSVGLAA STQKLLTLLRDC >CPS_2193 nth, endonuclease III MNKEKRIEMLTRLRDENPEPTTELNFSSPFELLIAVLLSAQSTDVGVNKA TAKLYPVANTPQAILDLGLDGLKSYIKTIGLFNTKAQNTIKTCQMLVDLH GGEVPENRAALEALPGVGRKTANVVLNTAFGWLKDNEGNYFLAVDTHIYR LANRTKYAPGKTVDQVEANIIKLTPKKTEFMFNLHHWFILHGRYTCTAKK PKCGSCIIEDLCEFKDKVGD >CPS_0424 nudE, ADP compounds hydrolase nudE MADENQLPIITHRQQVAKSALFGIEQIDLTFSNGEQRQYERMMGSGRGAV MIVPMIDDETLLLVREYCAGTHSYLLGFPKGLIDEGELAEQAANRELQEE IGYGSEQMHQISEMMMAPAFFNAKMTIFLAKNLYSSELEGDEPEPLEVVS WPIKDYKELLQQTDFTEARSIAALMLVRDLLAV >CPS_4180 nudF, ADP-ribose pyrophosphatase MKSNKNKPDAMLKFDNEQVSVHSVVTKYQGFFKMNEYSLQHKLFSGEQSQ LFTREVFERGDAVVVMPYDAKQDKVLLIEQFRPGALRGDDSPWLLEFIAG MFDENETPIEVAIREAKEETNLTLCPNDLVPMMQYLSSPGGMSERIHLYL AHFNSDLVTDGAIHGLPEENEDILLHIVSRTQALALLTDGKITNAATIIG LQWLALNYQSLSIQ >CPS_3625 nudH, (di)nucleoside polyphosphate hydrolase MIDAEGYRANVGIVIINDMGQVFWARRYGQHSWQYPQGGVDEGETAEQTM YRELHEEVGLKPEHVKIVASTKHWLKYKLPKRYIRHDSKPVCIGQKQKWF LLKLTAAESSVDLLHSSHPEFDDWRWVSYWYPVRQVVSFKRDVYRMVMKE FANFALPLTYERRPDRRKRRA >CPS_4171 parC, DNA topoisomerase IV, A subunit MSDALEYSLDGVEQVPLRRFTEEAYLNYSMYVIMDRALPHIGDGLKPVQR RIVYAMSELGLSATAKYKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPF SYRYPLVDGQGNWGAPDDPKSFAAMRYTESRLSRFSEVLLAELGQGTVDW QPNFDGTMQEPKTLPARLPHILLNGITGIAVGMATDIPPHNVREVADACV HLIENPKAEVSDLLEFVKGPDYPTDAEIITPKAEIEKIYQTGRGSIRMRA VYDVEQGDIVITSLPHQASGGKILEQIAGQMTAKKLPMVVDLRDESDHEN PVRLVIIPRSNRVDVEQLMQHLFASTDLEKSYRVNINMIGLDNRPAVKNL LVILSEWLEYRRETVRRRLQYRLDKVLARLHILDGLLVAYLNIDEVIEII RGYDDPKAELMSRFALSDTQAHSILEIKLRQLAKLEEIKIRAEQDELRIE QDYLEKILNSKARMSTLMKKEILAAAEQYGDDRRSQLVERSESKALTEKD LVPSEAVTVVVSDKGWARCAKGHDIDPTSLSYKAGDGYLCASKGRSNRPV VFIGSDGRAFTTDAHTLPTARSQGEPLTGRFNLSTGKTFVHSIMSDDDAQ YLLVSDAGYGFVSSFGDMVSRNKNGKALISLPEAAKVLMPQCINNIENDN CLTITSEGRMLVFPVKNLPVLSKGKGNKIINIPSARSKLREEFVSLLCII PEGAAITLHAGKRKLTLKAADIEHYKGERGRRGNKLPRGLQRVSAVEIES GSVTNSDEQSENEEPKASE >CPS_4176 parE, DNA topoisomerase IV, B subunit MTDQYNSDSIEVLSGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAG HAQNISVILEKDQSLEIIDDGRGMPTDIHPEEGVSGVELIFCKLHAGGKF SNKSYQFSGGLHGVGISVVNALSTRVDVSVRRDSKVYEMAFENGDKVEEL RETGTVGKRNTGTSVKFWPDASYFDTSKFSVRHLTHLLKAKAVLCPGLTI KFHDKIEDKKYQWCYEDGLTDYLKDSVKDYVSLPEDPFVGSFTSQLEAAD WAVTWLPEGGESIGESYVNLIPTIAGGTHVNGMRQGLLESMREFCEFRHL LPRGVKLTPDDIWDKCSYILSIKMQDPQFAGQTKERLSSRQCAAFVSGVV KDAFSLWLNEHTDKAELLADFCINNAQKRMRASKKVVRKKITQGPALPGK LTDCGSQDLARTELFLVEGDSAGGSAKQARDREFQAIMPLRGKILNTWEV DSGQILASVEVHDISVALGIDPDSDDLSELRYGKICILADADSDGLHIAT LLCALFMQHFLPLVQAGHVYVAMPPLYRIDIGKEVFYALDEAEKDGILDR IEAEKKRGKVNVQRFKGLGEMNPPQLRETTMDPNTRRLVQLTVDEHSETM ELMDMLLSKKRSPDRKIWLQSKGDMAIV >CPS_1380 phrB, deoxyribodipyrimidine photolyase MLLWLRNDLRTHDNPALHYFLSRNALSQHDSAVPAKAIFFICEQQWQQHD WSPIKIDFIKRHAHALVKELALLNIELELIELDNFTQQKTYLHSYCQLHN ITEVVANSEVEFNEQQRDKALYLELKASGIPLTLLEADVIVPKGKVLNQS GIMYKVFTPFKRAWLTYIQQGGFEYLGKVSVKSSAVNKADNQEEDQGSIS STWPLATVFEQQILPKFYQQKISTYKLNRDIPSIKGTSGISPYLAAGVIS PRFVLRLLLNKHPDLLVASDSEEFSWLNEIIWREFYRHLLFHEQRLCKHQ CYKENYQEMLWHNDAALFDAWCQGRTGYPLVDAAMRQLNQTGWMHNRLRM VVASFLTKHLLIDWRLGEKYFMQHLIDGDLASNNGGWQWAASTGCDAQPY FRIFNPIRQSERFDPKGVFIRKYIPELNNISDKAIHFPHQYIKDNELNIY WPAIVEHKEARLKALAFYKV >CPS_4978 polA, DNA polymerase I MTISATTQDSNNSQSPLILVDGSSYLFRAYHVPYLQALSTADGQPTGAIT GVLNMFRSLKKDYPNGNIIAIFDAKGKTFRNDMFPEYKANRPPMPDDLRT QIAPIHEIITAMGLPLLVIPGVEADDVIGTLAKQADELGIETVISTGDKD MAQLVTKHVRLINTMTDVEMDVAGVSEKFGVRPDQIIDYLALMGDKVDNI PGVVKCGPKTAVKWLAEHGTMQEVIANADKVKGKIGENLRDALEQLPLSY QLATIKCDVELEQTAGELAASEPDVDALAELYQKFELKRLLADLGKGGSD VGASTSSVAKKTKADSTASVGEQAVEIKAVDVEKTQYDIILDKELFEQWL KKLQACESFAFDTETTSVHYMKAELVGVSFAIEVGKAAYVPLTHDYEDAP EQLDKEWVLAQLKPLLESKTIKKIGQNLKYDANVLSHYDIALQGIEFDTM IESYCYNSVATRHNMDALALKYLDYQTVHFEDVAGKGAKQLTFNQIDIEK AGHYAAEDADITLRLHHAIFPALAETASMLSVFNEIEMPLLPVLARMEQT GVLIDSDILAEQSFTLGQRLDELEIEAHNLAGKSFNLASPKQLQQILFED LKIPVIKKTPKGAPSTAEEVLQELALDYPLPKVILENRGLSKLKSTYTDK LPLMVSDKTNRLHTSYHQAVTATGRLSSTDPNLQNIPIRSEQGRKIRQAF IAPKDHKIVAIDYSQIELRIMAHLSNDKGLVTAFSEGKDIHRATAAEIFA VELGEVTTDQRRSAKAINFGLIYGMSAFGLAKQLHIGRQQAQEYQDKYFQ RYPGVLTYMEDTRQQASEQGYVETLYGRRLYLPDINAKNGMRKKAAERAA INAPMQGTAADIIKKAMLAVDSWLLEQNDDRIKMTMQVHDELIFEIHQDI VEETTAKLVTLMNDAVELSVPLIAEAGIGDNWDEAH >CPS_2273 polB, DNA polymerase II MTNLKTAGIQNGFLLTRQVQDKRTGLVITLWLKTDAGPVKLEVTNELAVF FVEVEHLETAKSILDDQRILLEKHQVLSLKTFTQRDVAALYFSSMRSFYR ARDALKSQNIKCYEDDIRPDDRFLMERHITADIDYLGNHQLCGDYQLTKQ VKCKGAAIEQQHSLTMLSIDIECSMQGELYSIGLYANNNHTVFKRVLMIG VSQPDADSYIHWQTDEKQLLQQFIREVNLFDADILIGWNVINFDFMLLQK RCDLHGIPFSIGRDRTCPYWRKNANNTDQNFIEIAGRVVLDGIDLLKTAT YNFSSFSLDNVSHSLLGLGKKVADVENRVQEITDNFNHNKSALAAYNLED CRLVWLIFEKTRLLDFAKLRAQLTGLSIDRVGGSVAAFTNLYLPKLHRSG YIAPNMGDGESGLVSPGGYVMDSKPGLYKNVLVLDFKSLYPSIIRTFKID PMGLIEGLKAVSEQKSAHSKSEKLSDDCFDDVIRGFDGAYFSRTEHFLPD IIKSLWLERDKAKLQKDAALSQAIKIIMSSFYGVLGSTGCRFFDPRLSGS ITKRSHEILKKTSVWIEKLGYQVIYGDTDSIFVSIGAEKTKTQAKQLGAE LRSYINDKWQNRLKRDFDIESQLDIEFETHFTKFLMPTIRGIHTVKDQKS IGTKKRYAGVSDGELVFKGLETVRSDWTDLSKDFQQELYRLIFNDQPIEG YIKKIVDELKQGLHDEKLIYKKKIRRKLSDYVNTPPHIKAALLANQKLKE LGDKPTYKHRSLIRYVITLDGVQPLEFNTSKLDYDFYVEKQLKPIADDIL PFIGKDFESIAGDQMGLF >CPS_4366 priA, primosomal protein N' MPEQYIQVAIPVPMRQLFTYRVPEALSSPAIKVGERVAVSFGPRKVIGIV IDAQAQCDFEISKVKDITTRLNDNFNLSQSLVSFLQLCAHYYHHPVGDVF QQALPILLRKIENITLSPPMVWQAQCPSEDNSDLLAKLEKKAAKQFALYQ IINNHNGISWVELRTLGYSKAQLNALQSKALIIEKEQVASQYTWQENTLN QADRLVLSSEQAIIVSAINHSLAQFSCHLIDGVTGSGKTEVYLQSMEEVL ANNQQVLVIVPEIGLTPQTLNRFEQRFNVPIALHHSGLNDKERLATWLSA QQGSAAIVIGTRSAVFTPLHRLGLIIIDEEHDSSLKQQDSFRYHCRDMAI LRARQLNIPIVLGTATPSFESLQNALSGKYSYHQLLNRAGKSNKAKIALI DMNQQQVEFGLSGTLKHEMKQTLARGEQVLLFLNRRGYAPAINCQECHWL AECQRCDKPYTLHQKQQLLICHHCGSQKRIPPQCPSCGSVRIAPLGQGTE QLESRLEELFPESSIVRIDRDSTRKKGELAKLLQEVTDKKHQLLVGTQML AKGHHFPDVTLVAVLDVDGALFSFDFRASEQMAQLLIQVAGRAGRASKPG KVLVQSNFVDHPLLQDLVHNGYHHFAHQALTERKQALLPPFTFQALLRAD ANYPSYPEKFLRALTQRRLEGCEFAGPVPAAMEKKAGKFRYHLIIQAKSR KDLHRAILQLLIQIPNNEWQGKVRWSLDIDPIDLNW >CPS_0416 priB, primosomal replication protein N MIVSQENCLVLIGEVVRTPKQSTSPAGISHSQFSIDHKSIQNEAGMNRQA FVRIQVVATGDLSHLTRELIAGNVVKVTGFINRHESRNGNPLLALHAQQI EMIN >CPS_1204 rdgC, recombination associated protein RdgC MWFKNLYFFAFTRPFEWSEQDLEKHLSEHLFTPLGSTEISHFGWINALGK HGDTSVHSANGNFLICARKEEKMLPASVIKDMIEEKVNLLEQEQGRGATK KEKEQFKEDITFELLPRAFSRITDTHAYISPVNNIIVINSSSRGKAEDLL ALLRKVLGTLPVSSLEPDVCADETMTDWLNEKSLGGKFTLGMEAEFNALG DDGAVVRVKNQDLLSEEIKSHLDADKYVVKVALEWDESLSFILCDDLAIK RVKFFDVIHEQNDDIDSDDVIAKLDADFALMSGELNRFIIELLAEFSMKT TDLLEKD >CPS_4134 recA, recA protein MKDDKEKALSAALAQIERQFGKGSIMKLGDNTTMDVETISTGSLGLDIAL GAGGLPMGRVVEIYGPESSGKTTLTLEVIAEAQRNGKVCAFIDAEHALDP VYAEKLGVNIDELLISQPDTGEQALEIVDMLTRSGAIDVIVVDSVAALTP KAEIEGDMGDSHMGLQARMLSQAMRKLTGNLKKSNTMLIFINQIRMKIGV MFGSPETTTGGNALKFYASVRLDIRRIGAVKNGDEIVGNETRVKVVKNKI APPFKQAEFQILYGEGINNLGELIELGVKHEFVEKAGAWYSCNGERIGQG KANAAKYLDEHPEMAKDVDTKLRDMFLSKTVVAEDKSEVKEKEKA >CPS_2768 recB, exodeoxyribonuclease V, beta subunit MTQFDTSDSQQTATKDNHQEVTLQNLDAATIELTGKHLIEASAGTGKTYN ITRIYLRLLLERELTVEQILLMTFTKDATQELRGRIDAFIRLALSDWDSL CLKDAYFATLAQRIEKKQREFLLKRALLFLDEAAIFTIHGFCQRVLNQYA FTSGLPFNANMAANSSEITLQVCQDWYRSLAKSDHECFMLLASYWATPDS FLSSFSKAIGHTSTLSVVDVESIEAEFIVLVRLAAQTLTANSDLFENGLI LVKKGADQEKRRDELSQLKIWLESIISKELSLLDVGEGKVKMPDGFFDGK RYARSTYKAELLEAFAPVKEVKEQVKKIANNINKARAYGIVKSGIYIIRQ QVIEQKKALNLLDFDDLINTLANCLQSDSSGDEHSQLLAKQLLAQYPVAL IDEFQDTDPKQFGILQSIYYGDNAKKANAGLFLIGDPKQAIYGFRGGDIF AYLNARSGCDHHWLMDTNWRSTPQMIEGYNQFFTYKRNGSSSEETVSNEV NKQQSESVFGFGIPYLPVLAGKKSAQAQQVILDSDKALQFIHFTNDETSN DTNPQGDKVSQGSRPMLANWCANEIVTLLASKEQTGKVNPKDIAILVRDG AEARDIKHALQQAGLDSVFLSDRANLFHSQQAKQLLGLLKGVLLPENERL FVAALSCGLLGFDAKKLHQLQQDEMAYQTLKFAFVDYRTQWQRQGFITMA INLMHNLLDVPQNNKDRCLTNVLHLFEILQAASVRLSQGQELLHWFEQQC HLETNDVEAELRLESDGDLIRLITQHGSKGLEYPYVFIPFACRHKDPLKF GNKSVSYLEYHDANGKLCLSLDGSKEAKKAMSNEAYAESIRLLYVAITRA ERRCYVLCCAFDAYHLSPLGKTLQFQEQESIIKPLQVLKASAEHAIGIRE VSLDCSIDLYLEKNDEAALHQPKNSPQEFANTEVSKFIGKIERDWWLSSF TALSRNIRHAGVSNPDRDTTDIANRQLDTDSEHTDIELLSAEQICFKLSK GAHTGNLLHDILEQTDFSEPDWQESLEKPLLAYGELNASNANSISTSFTS DDLIQWLEQVISAPFISSHHSALTTDSENAGCLADIAFNRTLRESEFYFP MQGEGTNALANLLTDHRNRAERTDTGNSISTGRNSGISKTLNNTLKYPVM LPSYKKLSGMMHGFIDLIFEYQGKYYLCDYKSSHLGDSFQDYQFDALLDN VEKNYYDLQYLIYSLALHRYLKQTLVDYDVNQHFGGVYYLYLRGMTTEPE HKGAGVYYRKITEQEINNLDALFSNKESNEKCNEEA >CPS_2769 recC, exodeoxyribonuclease V, gamma subunit MIHLYPANKMENLLLLLNKISQLSPLGVFNQEVIVVQNAGMQHWLNLAIA QERGISMNMRYALPAQFLWKLIRSLASDEKVPEQSPYSREVLCWRIHALL ALDSVVEDDDFSQATHYWRGENTTDEEDNNTVNDSKHAQLKRYQLATQLA DLYEQYLIFRPQWLDNWQQGNFELDGLEKISASEHKWQGKLWRLLIAQLP YNPVELMHDAIANIQDKKELIPPRISFFGLNTMAPMWLNFINALSEHVEV HFFHLNPCFSYWGDVVTEKYALNKLSQWSDGVLPEELDVHSYVGNPLLAN LGQQGREFISMLQDYSTIDVELFEQAKSAQAISNNNDVTSVLHQLQNDIL ELSDARSPDDEAITPKAVQHDDSIVITSCHSALREVQALHDYLLHQFNQD KSLTPKDILVMCPQIEQYAPYVNAVFTRGWQDIAGEVPPLPCSIADRSAK DSDPLVAAFTELLTLPDSRFGVSQLLSFLRLPAMANNFSINGEDLAKISA WLEQATVHWGLDLTHKQSLLGQQANASFTWQQGLSRLLRGFAYADSEQIY QQQLLLSNVEGSDSILLGQLMLFIEQLHYFSENLQRSRTAIQWQTFLLEQ LSHLFSRVDADNVSNENSLMVIEQAIAGLVEHCHHAHFEDDISLLIVVDY LSQHFSQGDASKQFMVGQVTFCSMLPMRSIPFKVIAVLGLNDGEFPRQRQ ALGFDLMSLSKAKLGDRSRRGDDRYLFLEAIISSRNSLYLSYQGRNIKNN NEKQPSLVVKELMEYLAQGYGWQFSEEQLTSDNNNDDTNAESNQSGIYQL AMQAFSPNNYRGTWPSFDANWLALGQSSNSDNDESMGEGSTLAIESLAVT PEQTVEVSLSCQQLIRFYQHPAKMFAQQQLNLYFENHDVLLEDVEPFSVN HLQSYLLRQDLLSAALTGTIESPSNKDGSEQVITRAHLSGKFPDLPTTTN LFKDYQLDVQQFSEEISKVNCENPELIDCNLVLDIDGTEVDGPSAQKIRV SLNTKLAVKNNLLVHYRSSSAKAKDKFVMYFQQLVVQVWQDQAIANETNI TDDNQRLQQVTETIGLYFNTKAQKVEQFNVANIADAKSKLINLVKMFFKG QQQVLLLNGELADQVFTKKRGQLVEMTQARFEGLWIGDMSTRGLSDDDYL SYFWPECPQYHNHQADIEFIYQDLYQVVAKQAAKKASKTTAKPSKEAK >CPS_2767 recD, exodeoxyribonuclease V, alpha subunit MVDNSMNKPVYSRFSQVKDTIQGVEAIDYFFAKEMLSPLTALTNNQSLTE DTAGSGSDTTANISCQHNLYHLFLALSASLRAGHSCLPLSEVADQHWGKG FTSTKKKNNVNKDNQQDSEGLTEEHTQELSHAGFVFAPLTQLQVMLSELN ILASDQQLLVLQHDKLYLRRYFQFESDLGEAIHARLLQQCQYDNDSIGQC IGKLFPNDLAQVEAQDVESLEIDWQKVAVANAINKNFSVIAGGPGTGKTY TVTKLLAALVMLEQMGLAKTGKQQAEVAQQKQQGTAVLNIALVAPTGKAA QRLSESIVNAISGFKNLIDDKVLAEIPTQAQTLHRLLGVLPNSPNFRHHQ DNRLPYDIVLIDEVSMVDLPLMTRVFRALKDTAKVILLGDADQLPSVAAG SVLADIAPRPHGGFSLENEQYLAQVCQLLPAQVSDYFSAHRLPSQSAEQS SFDYLTFLVKSRRFDGKGGIGLIANSVIKGDVKRSWRLLNDSLSQSTQEG FIQGDYLQAGYLQGDKSQKQQPSQLTLAQGDLTTWLAPLVKQYYQPIEHC STVSDAFVLLSQFRVLCATRQGDYGVERLNEVIKSYLGKNNAPYQQHQQT LYHGQPIMINENDYRLGLYNGDIGIIWKVIDQAGKTHLMACFEDTTLESK SAESKVDESTETSQLTIRQILPSRLPQFESVYAMTIHKTQGSEFSHVAMV ISATQSEQQTLQQGKQQGGSRLLSRELLYTGITRAKKQLTIAANQRVWQQ GVTAQVKRHSGLYLDFDKV >CPS_0003 recF, DNA replication and repair protein RecF MSVARLTTYNFRNLSSVAIDLHPKLNFFIGNNGSGKSSLLEALFFLGHGK SFRTSKVEHLACYETDNFVVSIKDVNDLQLGLSKNLQTGVTLIKINGERH ARLSELAKNIAVQIVTPESFKLFFGGPKERRRFIELGMFHVKHDSSKQWR EFNRVLKQRNACIRHNLDKATFDYWTGLFCQLSEQVAEVRSQYITNLISE LPYWLEILLPNIADKVTVQYLQGWPQKKNLMDSLNDSHEREQAFGYSIYG AHKFDVKFLIAKQALESQLSRGQQKLFLLALTFAQAKLIARVNRVKPILL IDDIGAELDINSRESLSQALSILDCQVIITAIEEGVLQPFIDDVSVADKE SSKKTKYHMFHVKHGGILPVNNSVKIE >CPS_4976 recG, ATP-dependent DNA helicase RecG MALEALSRLSQVPLSTLKGVGPSLAEKLEKIGLLSVQDMLFHLPLRYEDK TRITTVRDLLVGTSTNIIGEITDSQITHGKRRMLVVTLHDGTGSIQLCFF SFSASQKNSLAIGKTIRCYGEVKRGPRGYQIVHPEYKSLDDDIELTPVEE TLTPVYPSTDGLRQISLRSLTEQALIRLQRGQVEELLPANLFNEQYSLSE ALTIIHRPPPEVSVEQLEQGRHPAQQRLIKEELLAHNLSMLKLRQNSDIH DAVSLLGDEKISQKFLNALPFSPTNAQARVVEEIKTDLAKTQPMMRLVQG DVGSGKTLVAALAALTAISEGYQVALMAPTEILAEQHAINFANWFTPLDI SVGWLAGKTKAKAKRLALEHIASGEMQMVIGTHALFQADVVFKNLVLVII DEQHKFGVHQRLTLREKGVFDDKYPHQLIMTATPIPRTLSMTAYADLDTS IIDELPPGRTPINTVALPDLRRGDVIERIRQGCVNDGRQAYWVCTLIEES EVLQCQAAEDTAILLQEQLPELKIGLVHGRMKAIEKQEVMDAFKSGDLHL LIATTVIEVGVDVPNSSLMVIENPERLGLAQLHQLRGRVGRGSVASFCVL LYKAPLSKTATKRLAVLRESNDGFVIAEKDLEIRGPGELLGTRQTGLADL KIADLLRDGYLIPEIKQKAYLLSRQQPECAQALIQRWLGNKERYSNA >CPS_4094 recJ, single-stranded-DNA-specific exonuclease RecJ MSKTIVRRVKVATDHLPDNLPEIIKQIYASRGMESAQELELNVAHLQGMV DETALMGMDKACQLLHDALVNKLRIVIVGDFDADGATSTALMMTALSLFN SNNHDFIVPNRFEYGYGLTPEIVDIAAQQNTQMLITVDNGISCIAGVKRA KDLGMQVIVTDHHLPGHSLPIADAIVNPNQHGCNFPSKALAGVGVAFYLM LALRKYCREQNYFSEQGIAEPNIAQLLDLVALGTVADVVSLDANNRILVE QGLKRIRAGKTRPGIQALIEIANKNQQRLVASDFGFALGPRINAAGRLDD MSYGINCLLATDLSSARVMAAELDDLNKTRREIEQGMQAEAEQVLTSLKF DEDNLPNAIALYQQDWHQGVIGIVAGRLKEKFHRPCIVFANGKDDDSVDV SEREIKGSARSIPGLHIRDLLEHIDSQHPDIILKFGGHAMAAGLSIKHGN FARFQQLFNELAGKWLKEEDLQSIILSDGELMLEHLSLDFAEKLRDAGPW GQNFPEPLFDDTFKLVQQRIVGEKHLKIVVEKQGEIFDGIAFNVDVKTWP NAQVKQVHLAYRLDVNEFRGKRTVQFMVENITAI >CPS_3825 recN, DNA repair protein RecN MLLQLNIQNFAIVRSLDIDWQSGMTTITGETGAGKSIAIDALGLCLGDRA TTNVVRPNCKKADLAATFEIKKNKMARAWLKQHELVSEHDSECILRRVIS AEGRSKSYINGSQVPLVQLKEIGQLLINIHGQHDHQLIVKANQQCRLLDN YANHTPLLSAVKHYAQQWNKLNKELEMLQQSKQQREAEQQLIQYQVTELD EFSLQPDEFSTLEKDYKRHSNAQDLLDSTLSTLQSLSENDNFNILDALRE CSENINSIARVDNQLTDVATILSDTLIQLDEANNDLTHYYQQLELDPQNY AIIEERYSTAVQLAKKHQLSPENLVNFHSELKQQLASISNDETRIDTIIE ELEQTRIHYNESAELLSASREKSGKSLSKLISKSMQELNMPHGQFFIAVE NNKKQENGKETINTNGSDTISFQVSINPGQALEAMHKVASGGELSRISLA MQVILADKVITPTLIFDEVDVGISGPTAAMVGKKLKQLSKNTQVICVTHL PQVACKGHQQLFVSKLTDGELTETKVSELSESNRVKEIARLLAGDKISQH SLANAQELLAS >CPS_4120 recO, recombination protein O MIEQNAFVLHSRPYRENQQLVDLLTEQDGKVTALVYVGQSKRSIKKGLIQ PFLPLKLTLKGQGNVKYITQIDSISKSYSLVKYSLFSSFYINELLIRLLT EQIACQHLFSQYQTTLTALAQGEEIAPQLRLFELALLEELGLSFDFSPVF EHDVNYFHYIAEQGFVPVYDPFPKNSTQCFDKTHLQAIAQRGSLYQNGMS EDVSYTFKLLMRQVINQLLGNKPLNSRKLFANKAYS >CPS_0083 recQ, ATP-dependent DNA helicase RecQ MNSSVANAQTSAEISTELSAENNALLLDTLKHYFGYESFREGQAKIINSL LQGQDSLVLMPTGGGKSLCYQLPAVLLPGVTVVVSPLIALMKDQVDGLTR QGISAAFINSSLEQSEISDIFARLGRGEIKLLYVAPERLTNYYFLQSLNQ LPLSLFAIDEAHCISQWGHDFRPAYTKLQCLKQNFPTVPVMALTATADVT TRKDILNQLALPNPYIHLDSFDRPNIRFTLAPKYNGEKQLLGYIKKKGED SGIIYCNSRWQVEKLAKYLAASGINCAAYHAGLENEIRSLVQEGFTKDNI QIVIATVAFGLGINKPNVRYVIHFEPPRTLESYYQEIGRAGRDGLNAEAL FLVDDKDVARIKKRISEGDNPQRVNVEMQRFAAMDAFIDAQTCRRQVVLN YFAEYTEKGCGNCDICLDPPSQFDGTIEAQKVLSCVYRVEQQGDINHVIA VLRGELTEKVKQLAHDKVSTFGIGKGKTVGYWFSIIGQLIHLGYLQQDIE QQSILCLTQASGVVLKAQEPLMLASPRLQKASYWQEKSPQKSYDRVLFAK LRELRKAIADGEDIAPFIVFNDATLSELARIKPKTSREMLSISGIGDVKL SRYGQPFLALIKEHK >CPS_3690 recR, recombination protein RecR MKFSPLVQELIDSLKCLPGVGAKSAQRMAFQLLERNRRGGSKLANTLAKA MTDIGHCQQCRNFTEEALCEICQSPKRQLSTTLCIVETPGDVIAIEQTGE FFGKYFVLMGHLSPIDGIGPDDLGLDILAKQFATGQFSEVILATNPTVEG EATAHFIAELAQQHQVNISRIAHGVPVGGELEYVDGNTLSHALSGRKSYQ I >CPS_0300 rep, ATP-dependent DNA helicase Rep MKLNPGQNEAVKFVSGPCLVLAGAGSGKTGVICQKIAYLIQKCDYKARNI AAVTFTNKAAREMKERIQKMLGRDLTRGLTVSTFHSLGLDIVRREIKILG YKPGFTLFDDQDSLALLKELTIDELDGDKDLLSKLQSKISNWKNDLFLPD DALKSASDADSSEYAEFYQRYHKHMKAYNALDFDDLILIPTLLMKNYPEV RERWQNKIRYLLVDEYQDTNASQYELVKNITGERGRLTVVGDDDQSIYSW RGAKPENLILLGKDFPALKLIKLEQNYRSSGRILKCANVLIANNPHVYDK ALFSELAYGVELRVIQAKNEENEIERVIGELIGHRFMNRSQYKDYAVLYR GNHQSRLLEKALMQNRIPYKISGGTSFFSRPEIKDVMAYLRVLVNPDDDN AFLRIVNVPKRELGPATLEKLGTYANMRQISMFAASFELGLEQTLTGRSL MKMQAFTQWVVDIADQAERGDTAAVLRSMIRQINYEDFLYDTSMSAKAAE MRMKNVTELFSWVTQMLEGSDDEEPMTLPQIVTRLTLRDMMERNEEEDSN DQVQLMTLHASKGLEFPYVFLIGMEEGLLPHQTSIDEGSVEEERRLAYVG ITRAQRELIFTYARERRQFGELSRTEASRFLHELPQDDLNWELGAAKKKT VEHVEKSNQQGMAGLRAQLAKAKEAKK >CPS_0174 rhlB, ATP-dependent RNA helicase RhlB MKKTHLTETKFADLNLAPQVVTGLEAMGFDYCTSIQAKSLPVLLQGTDLA GQAQTGEGKTIAFLAATFHHLLQKEAPTHNQPRALIMAPTRELAIQIHRD ATEMAKSTGLRLGVVYGGEGYESQRLELEAGVDILIGTCGRLIDYMKQGI YNLKNIEVIVLDEADRMFDLGFIKDIRYMFDKMPPATERLSMLFSATLSF RVKELAFDHMNDPTSVEVEPEQKTNSRISEELFYPSNEDKMTLLQTLIEE DWPEKAIVFANTKHVCEKVFDHLNADKIRVGLLTGDVPQKKRLKILEEFT DGTVDILVATDVAARGLHIPSVTHVFNYDLPDDCQDYVHRIGRTGRAGET GHAISLACEQYVFNLPEIETYIGHDLPVTKYDHDALLTDLPRPKPRQRRP RTGANRQGGRANPRQGNRGSTPNRGTRS >CPS_1569 rnhB, ribonuclease HII MASKQIFPDFEYPIAYCIAGVDEVGRGPLVGDVVTAAVILDPDNPIEGLM DSKKLSEKKRNLLSLEIKEKAISWSLGRASPQEIDTLNILHATMLAMQRA VEGLNVEPDFVLVDGNRCPTFLCNASESNQQNLKIASQAVVKGDARVTEI SAASIIAKVARDNEMIALDKLHPEYGFAKHKGYPTKLHLEKIIEHGVLDC YRQSFKPVARVLGTYHD >CPS_3473 rnt, ribonuclease T MSESSSIDTQQKSNPNSEKVKSKFSQRFRGYFPVVIDVETAGFNSQTDAL LELAASVLHLDEDTGDFSIDETIQFNIEPFEGANLEPKALEFTGIDPTNP LRGAVDEDEALKDLFKLVRKKMKVAGCQRAIIVAHNAAFDLGFLNAATER CKIKRSPFHSFVSFDTTTLAGLALGQTVLAKACIAAKIDFNNSEAHSALY DTEKTAELFCHIVNKWRALGGWPIAVEETEV >CPS_2116 ruvA, Holliday junction DNA helicase RuvA MIGRLRGMLVEKNSPEILIECAGVGYEVTMPMTSIYALPELEQQATIYTH FVVREDAQLLYGFANKVERKLFRLLIKVNGVGPKLALAILSNMSADQFVS CVRHDDISAIVKIPGVGKKTAERLLIEMRDRLKDWQAQQIHLVSDDGVIP EQLSAELSQETTFVNDNKGDAINALLSLGYKQVQADKAVKSVYNRGMSSE NIIRDALKSMI >CPS_2117 ruvB, Holliday junction DNA helicase RuvB MIEADRLIEPIASVEDERVDRAIRPKMLQDYTGQQHVKAQMEIFIPAAKN RGEPLDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLAAL LTNLEENDILFIDEIHRLSAVVEEILYPAMEDYQLDIMIGEGPAARSIKL DLPPFTLIGATTRAGALTSPLRDRFGIVQRLEFYNVADLSTIVSRSAHFL NLTIDEEGAFEVARRSRGTPRIANRLLRRVRDYADIKSHGVVNQQTAAAA LDMLEVDSEGFDIMDRKLLHAIIDKFMGGPVGLDNVAAAIGEERETIEDV IEPFLIQQGFLQRTPRGRIATDRAYQHFGITKDQTKD >CPS_2115 ruvC, crossover junction endodeoxyribonuclease RuvC MTIILGIDPGSRFTGYGVIKQEKQRFTYLGSGCIKAMSQGEDLASRLQTI FAGVSELIIQFKPDMFAIEQVFMGVNPGGALKLGQARGAAIVAATNSGLT IAEYSARQIKQAVVGTGAADKNQVQHMVKSILKLPGTPQADAADALAVAL CHGHSHTSAAILAGQATKIVRGRLR >CPS_2014 sbcB, exodeoxyribonuclease I MQDRTSQNNTEQPSILWHDYETWGINPKFDKPSQFAGIRTDLDLNIIGEP EMFYCTPPVDYLPHPEACLVTGITPQKAQREGLSEAEFAARIHTLFTQPN TCVAGYNSIRFDDEVTRYLLYRNFYDPYAREWQNGNSRWDIIDMVRACYA LRPEGINWPTVKRDGEEVISFRLELLTAANDISHEAAHDAMSDVYATIAM AKLIKEKQPKLYDFIFNLKNKNQVKDLINTAEMTPIVHTSSKVSSAHGCT SWFAPVSYHPVNKNAVICVDLARDISPLLTLSSEEIKARLYTRYDDLAPD ELPIPVKLIHVNKCPVIAPAKTLLPENAERLAIPRDVCLDNLALLRKHAE LRDKLSDVFATSDFDNDDVDAEQALYGGSFFSHSDKAQMDILRGLSPEQL ANHPFQFQDERLSVLLFRYRARNYPYTLSTEEQQKWQQYCQNKLQYGGKG ILSLDEFMMKIENLAHEHETDKAKMSVLKALYEFLQG >CPS_2848 sbcC, exonuclease SbcC MRILSLRFENINSLKGSWKIDFSEAPFDNNGLFAITGPTGAGKTTILDAI CLALYHQTPRLTVSKKQNQLMTRHTSHCMAEVEFEVRGQGYRAFWSQKRA RNKLDGNLLEPVAELAKLDGTIVSDKLKMVRSDISELTGLNFSRFTKSMM LSQGEFAAFLTSQPNDRAQLLEQLTGTEIYGDISKQVFDNHRSASEALKL LQAQSQGVSLLDDEQVKALEQQLTEITEQEKTVNAQLQQAQQVKAWCTNF SVNEQNQHAAKTQLLEIEKKELAAKQDLDLLTLSSLAEPIKAPYEKMVHY REQYQQTLQQVTSQTEQLAILDQDIVVSDEALTLLKNRHVEAEAQRKVIE QVLHDKIQPLDHNITHQQNALTETKNTIAEQSETLGVNANALTALEAEHQ KAQETVQQQQAYLSQGQALAKLPEKLPLWQNQYQQLSQLQANVVALVNEQ DNTEKALLTLQTRQQEQQLQITQSEDELKQLNSRKQLMGEKTQQLIQHSQ AAQAILSSRVTSTSTSTGNNDKGEGVVNELTGGMLNQAILDRQNQQLALK QAQQLAQRFHVLTQEQQGLSAQQSQDKQQLVITEQALVKLRQRYSATQQQ KKDVETLLAQQQTIMALSEHRAKLQPEESCPLCGSTDHPAINEYRSLDSD EHQQRLSQLTLERAQLEKQGKELNGVQANLTAQLEMQTNRLQGITSEQSN LAQNWQSLNINQYVLLSQNEQSFSLQNVDVEQSINHQLTMVFGQLEELLL LQTSLQENSQNQQQNSEQISHCEKQLSTLFNQLQLLEEQGKNQQGSKQKF TEELRLKQQAFLELNAQLLADIKTTEITLPLGGVNEKIKEQDQEQNLEQE QARKLVICIDEKWLESLSKQGADYQQTVTTHQAAKTQLDSLVNDLGLLKQ QVVHQQNQVTQIKSQLTQQENDLIQDYSLRVTHFVELGITGEDMQDSVLL RESINSQRELSEAEFTVADQRHNEKKAAQQLNRGQLTTSKSLLDNLFPKN DNAKKDWLALLTDSKFTDEEEFLLALLSAERKHDLTKLANDIDDSKKQAK ILLSQSEKITLELNVQKDTLSEKGAVDFVESSVSESLVNLSDLLKQCQQN IGQFSQQIEQDNSNKIQQKTLLEQIKLAQDALDDLSHLNALIGSADGAKF RKFAQGLTLANLVHLANAQLERLFGRYQLQCQQNDTLELEVLDTWQGDTA RDIKTLSGGESFLISLALALALSDLVSNKTSIDSLFLDEGFGTLDNNTLE VALDALDNLNASGKMIGVISHVDALKERIGVQIKVKKLSGLGVSSLDKQY EFHAETVS >CPS_2849 sbcD, exonuclease SbcD MRIIHTSDWHLGQYFYGKSRANEHQQFLTWLLAQVTLHNIDAIIVAGDIF DTSTPPSYAREMYFDFIAKLHVTQCQLIILAGNHDSVAMLSESQAVLASL STRVITQVIPASLSEDELEEKALSKQVFPLHDADGKTTAIICAIPFVRPR DVIRSRAGQSASDKQQSLQQAISDHYQYLYQQARKQADAFEKTEGIALPI IATGHLTALGVSINDSKSDSVRDIYIGSLEAFPASAFPPADYIALGHIHR AQQVAKSEHIRYCGSPIALSFDEAKQDKRVLMVEFTSGKLNQVEALIVPC FQPLYMVKTSVDELETSLQETLVAFEERQVAEKFPASVKAWLDIEIDNGD HLSDLSQRVTELAVDMPFEVLLVRRCKKARQRRQAQLSQQDNSTLSELSL TEVFDSRLSQLEWQTDEEVARKTRLTQLFTELSVEMKQAASIANQKSDAD KALITSSSAQAESTSQSALSEEESTEAEKDSVITEKDSAIAEKDSMTPES LEQHNS >CPS_1580 seqA, seqA protein MKNIEIDEELYQYIATNTQFIGESASAILRRLLNLGVEAKLETVTVNEPS DVVEVNILPESEEKAVKIETAEVKEPKSKAVVKVTAESHETVFNFINKEE LAMQRGAVGRFLLILAALYRAHPDQFGVVTDISGRDRLYFANSENKLAES GSSTKPRQIPESPFWVITNSNTTRKKMMLTKASISLGYSDSDVEKIRELL >CPS_4097 srmB, ATP-dependent RNA helicase SrmB MKWVLLTLSELSLMFEQFDLDSELLASINKIGYTKPTSIQELVIPQAMVG KDVLASAPTGTGKTAAFLLPIAQHLLDYPRTKPGFPRVLILTPTRELAIQ IGEDSEQLTELTKIKTGVITGGVNYGSHADILTSTTDILVATPGRLLEYI ENEQFDAREIEILVLDEADRMLDLGFSETINRIVAEARWRKQTMLFSATL ESPGVQLFAEEVLNEPVFLESKPSRKEKAVIHQWLHLADDANHKLNLLVN TLKQEGVERTVVFANKRETVQYLSGKLYAEELPCVWLEGKMPQDKRNKAI ERFKKGEVKVLVATDVAARGLDIDDISHVINFDMPRKVDIYIHRIGRTGR AGKKGTAISLVEAHDMGVIGKIERYTKERLSRRFIQELRPKNKESRVVNK KAKIKLTTSQKKAKTKKQVKKKAKRAKAAK >CPS_0930 ssb, single-strand binding protein MAGVNKVIIVGNLGKDPEVRFMPNGGAVANITVATSDSWKDKQTGEQKDK TEWHRVVMFGKLAEIAGEYLKKGSKVYLEGSLQTRKWTNQQGQDQYTTEI VLQGFNGVMQMLDGKSSQGQGGGFANQGQQQSGGFQQQAPQQSGGFSNQP AQQGGFSNQGQQAKAPAQQGGFAPQQQAPAQQGGFAPQQQAPAQQGGFAP QQAPAQQGGYQQQQAPKVNPQEPSIDFDDDIPF >CPS_2351 tag, DNA-3-methyladenine glycosylase I MSEKNTCRCPWLDTSKLDYVKYHDEEWGVPVYEDKKMFESLVLESAQAGL SWYTILKKREGYRKLFADFEVTKVAKFTDDDVERLMQDASIVRYRRKIEA AINNANRFIEIQNEFGSFTKFIWSYVNNETIVNNLDTIKDYVATSPISDA LAKDLKKRGFKFLGPTTLYSHLQATGLINDHSNSCFRKNAFKLL >CPS_0167 tatD, deoxyribonuclease TatD MIDIGVNLTNKRFEKDREDVIRRAQKAQLDGLLITGTSVAESQKALALCQ HYQTSFPDFLFSTAGVHPHDADHVTADYLEQLKLLAKQQQVKAIGECGLD FNRNFSAPAQQQKVFSEQVALASELQMPLFLHQRDAFEPWFSTLSPYFSE VPAMVAHCFTGTKSELTQCIAADMYIGITGWLCDERRGQSLRDIVSLIPL NRLLIETDAPYLTPRTIRPKPKSSRNEPCYLPFIVKEIASITGLDQEEIA WQTSRNAAKVFDFPSKKEMI >CPS_1197 topA, DNA topoisomerase I MAKSLVIVESPAKAKTINKYLGNDFIVKSSVGHVRDLPHSSTGKKVAAKS PAEVRKMEPAAKAKYKAKRDKQALVNRMGIDPDKNWAADYQILPGKEKVV AELKKLADKADIVYLATDLDREGEAIAWHLKEIIGGEDEKFRRVVFNEIT ESSIQQAFATPGELSMPGVNAQQARRFLDRVVGFMVSPLLWKKVARGLSA GRVQSVAVKLVVEKEREIKAFDPKEFWEIAVDTHASTGEVLTLDVTHENG KAFKPTTEKETNAALAILKPADYAVSKREDRPSKSTPSAPFITSTLQQAA STKLGYGVKRTMGLAQRLYEAGHITYMRTDSTNLSKDAVEMCRKYISDSF GDNYLPENAKTYGSKAGAQEAHEAIRPSNVKLEAAFLEGIEADAKKLYEL IWRQFVACQMTAARYTVSTLTISAASFDLKAKGRVMQFDGWTIVHPQLSK GDDTHLPDLQVGEALTLDKIEPSQHFTKPPARFGEASLVKELEKRSIGRP STYASIISTIQDRGYVRLDKKRFYAEKMGEIVTNSLSGSFEKLMSYEFTS NMEQELDEIAGGSADWKGVLDEFYKNFTKQLSKADQPSEDGGMQTNEPVL TDIDCPTCNRKMGIRTAQTGVFLGCSGYALPPKERCTKTMNLTAGEEAVS ILAEDAETEALMAMRRCDKCGTAMDSYLIDETRKLHVCGNNPVCDGIEVE KGEFKIKGYDGPILDCDRCESPMELKSGRFGKYFDCTNEECKNTRKLLAS GEAAPPKEDPVQLPELECEKSEAHFVLRDGAAGIFLAAHTFPRSRETRAP KVAELQRFRDRISEKFYYLADAPAEDNEGNLSVVRYSRKTKEQYVMTEIA TEEGKPKATGWTAKYIDGKWIEDIPKKKVAKKKAAKKPAAKKKAKTAAE >CPS_4792 topB, DNA topoisomerase III MKLYIAEKPSLGRAIAAALPKPQKNHKTHIELANGDVVSWCIGHILAQAD PEDYDAELKKWRMESLPIVPQQWQLKPIARTRSQLTVLRKLVKQADEIIH AGDPDREGQLLVDEVIDYFKLSKTKKANIKRLLISDLNLPAVKRALTSLK PNSDFMPLSISALARSRADWLYGINLTRAYTLQGQKTGYNSVLSVGRVQT PLLGLVVRREQEISEFVSKPFFQVQAHIALSSKDAVAFTAKWQPSENCQP YCDEEGRVLVKALAENVVKRIANQPATISNIDSNEKQQAAPLPFNLSQLQ ISAAKQFSMNAKLVLDVCQALYERHKLITYPRSDCRYLPKEQLKQASGIV NTLANSSLPCNKPAQGANTSFVSKAWNDKKITAHHAIIPTEKSPENINLN TFEKNVYLLIVRQYLVQFYPAYIFQQTKVELLIAGGNFMSQAKTEKQLGW QVLFPKSNKTNNQSKLEHGQEQEQTLPPLTKGQLLHCQQGELIEKHTSPP QSFTDATLLGAMTGISRYVNDAAIKKVLKETDGLGTDATRAGIIDLLFKR GFLQRQGKAITATKVGVALITALPTMATLPDMTAQWEATLTAISEKNANY LSFMQPLTVIVNEMVQGASQQSFSGLPKVAFKPKRGKRTFQKKAVKKAS >CPS_1636 umuC1, umuC protein MFGLVDAVSFYARAEKVFDPSIRHKPVVVLTNNDGCICAVCPIARQLGVP KFVPYFKVKSFLAKHGVVVRSSNYELYADLSERMMNVIARYSDNHYVYSI DESFLHFKNFSCVDNWHEYGHVIRKAVWRETRLPVGVGFGATLTLAKAAN HASKKLSGFDGVAVIDDKASRKEILSRMSLTEVWGIGSKLGKRLSILGLK NGWDLANQSPKAMRGQFGVVVERTVNELNGMPCLQWDEIGQDKQEIFSTR SFGQRVTDGHALKAALSSHASIVGAKVRRQGSLIKRLVIFASSSPHDDSY YKKSVIYEFPIATDNILKLVGAISYVFDNIYRQGVSFYRCGVGGVELENS QFQQQDMFSLSVNNPPLMKCYDQINHRYGRGAVEVAIAEKNEKWAMRRNF LSPRSTSNWSEIPKINC >CPS_2682 umuC2, umuC protein MYALVDAVSFYASAEKVFDPSIRNKPVVVLTNNDGCICAVCPIARRLGIP KFIPYFQVKSLLEKHGVVVRSSNYELYADLSERMMNVIGRFCDNQYIYSI DESFLYFDHYESCINDWHEYGHKIRKAIWKETRLPVGVGFGETATLSKAA NHAAKKLSGFNGVAVINSAVSRDKILKRMAVDEVWGIGRKISKRLGLEGI NNAAQLAEQDPKHIRKQFSVVTERTVNELNGISCLSWDEVKSPKKEIFST RSFGQRITTKNELRSALVTHAAIVGRKVRRQNSLIKKLMIFASNSPHDDL YYKQSMVFPFIIATENTCEMARAVNQVIDSIYKAGIKFYRCGVGAIELNS KTFIQPDLFMPDHTNSNVMKCLDNVNHRYGDSTLKLAAEGHHEKWQMRRA FLSPQYTSQWRDIPKIQC >CPS_4288 ung, uracil-DNA glycosylase MIKPQWQQLIAGEAKQSYFKNLVKEVATQRASEISIYPAEGDVFNAFNHV DLAEIKVVILGQDPYHGKDQAHGLAFSVQEGIKVPPSLVNIYKELATDVE GFEIPKHGCLTHWAEQGVLLLNTVLTVQQANAHSHAKLGWETFTEQAINA LNEHNDGCVFILWGAHAHKKGKNINQEKHLVLAGPHPSPLSAYRGFFGCK HFSQANAWLAKHEVNQVDWHLPLEA >CPS_0920 uvrA, excinuclease ABC, A subunit MKNIEVRGARTHNLKDISLTIPRDKLVVITGLSGSGKSSLAFDTLYAEGQ RRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGT ITEIYDYLRLLYARVGEPRCPEHGQALAAQTVSQMVDKVLELEEGTKVML LAPIIQDRKGEHVKLLDNLAAQGFIRARIDGEVCDLSDPPPLELHKKHTI EVVVDRIKVREDIQLRLSESFETTLTLTSGTAKVAFMDEPDREELIFSAN FACPHCGYSMQELEPRLFSFNNPAGACQTCDGLGIEQYFDSSRVIANAEL SLAGGAVRGWDKRNFYYFQMLQALADHYKFPVDKPFNKLSAKAQKVVLYG SDEQEIEFKYMNDRGDVVVRKHPFEGIINNMQRRYKETESNSVREELGKY LNSQHCPDCNGSRLRLEARNVFIEDTPLTVVAEFSISDALKFFQGLTLTG QKAQVAEKILKEVNERLGFLVNVGLNYLNLSRGANTLSGGEAQRIRLASQ IGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNTVIVVEHDEDA IRAADFVVDIGPGAGVHGGEIIAQGTVDDILNCKESLTGKYLSGVERIEI PKQRHAFDKKNVVKLKGATGNNLKNVDLVIPTGLMTCVTGVSGSGKSTLI NDTLYKLAHIELNGATVDEPAPYKSIHGLELLDKVIEIDQSPIGRTPRSN PATYTGIFTAVRDIFSATQESRSRGYKAGRFSFNVKGGRCEACQGDGMIK VEMHFLPDVYVPCDVCKSKRYNRETLEVLYKGKNIHQVLDLTIEDAFDFF KAIPAINRKLQTLLDVGLGYIKLGQSAITLSGGEAQRVKLSKELSKRDTG KTLYILDEPTTGLHFHDIKQLLNVIHRLRDHGNTIVVIEHNLDVVKTADW VIDLGPEGGAGGGEILVTGTPEQVAKHKTSHTARFLKPLLASK >CPS_2887 uvrB, excinuclease ABC, B subunit MKKLTICSEYTPSGDQPTAIKQLLEGIESGLAHQTLLGVTGSGKTYTIAN VIEKLNRPTMMLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAY VPTTDTFIEKDASVNEHIEQMRLSATKALLERRDVIIIASVSAIYGLGDP DSYLKMMLHISRGDIINQRDILRRLAELQYTRNDVAFARATYRVRGDVID IFPAESDRLALRVELFDEEIERISQFDPLTGQVERTLDRVTVYPKTHYAT PKEKIIAAVDKIKIELKHRSQQLKDNNKLVEEQRLTQRTQFDIEMMTELG YCSGIENYSRYLSGREEGGAPPTLFDYLPDDGLLIIDESHVTVPQIGAMY KGDRSRKENLVEYGFRLPSALDNRPMKFEEFEAISPQTIYVSATPSKFEL EKCGSDIAEQVVRPTGLLDPEIEVRPVETQVDDLLSEINKRLPLDERVLA TTLTKRMAEDLTDYLYDHGIKARYLHSDVDTVERVEIIRDFRLGKFDVLV GINLLREGLDMPEVSLVAILDADKEGFLRSDRSLIQTIGRAARNLNGRAI LYGDRITGSMRRAIDETERRRVKQHQYNLDNNITPQGVVRRITDVMGVGS YSDAKSLDKVAEANTNYHINQQAEEPLLTTSQIDTKIVELEKLMQGHAQN LEFEQAAAMRDKIAKLRIQQLST >CPS_3270 uvrC, excinuclease ABC, C subunit MLHNTTDNVENNQTIKASTFDSEAFLRVVTEQAGVYRMYDSKQVVIYVGK AKQLKKRLASYFRKDVGSVKTQVLVKQIAAIEVTVTHTEGEALILENNYI KKYQPKYNILLRDDKSYPYLLITAHKHPKLGLHRGGKKVKGEYFGPFPTV GAVWESLRLMQKIFPIRQCEDSYYRARSRPCLQHQLGRCSAPCVDKISVD DYKEQVNLAKLFLQGKSSAVIEQLVARMELASNELHFELAAKYRDQIVTL RKVQQQQHVSGHVAELDVVGLYRDKTQVCIHLLFIRQHKILGSKSYFPTV PSESSDSEILQAFIAQHYLSNEMLSHGKVQSSIPKEIVIKESIEQVVELA RLLSEQAEYDVKISTNTRSERAQYLKLAGTNAHTALVTRNSHKESMQARF VALNEVFELENGIQRIECFDISHTMGQQTVASNVVFNQEGPLKTDYRRYN VFGITPGDDYAAMAFALNKRYGKLKANPIKPEEHGALEKLPDIVFIDGGK GQLAKAEEFFSQLALTRTPLLVGVAKGESRKPGLETLILAGSHQLISLPA TSPALHLVQHIRDESHRFAITGHRAKRQKVSKKSRLESIEGIGAKKRQSL LTFLGGLQEVMQADITALAKVPGISHVLAEKIHNALHDK >CPS_0080 uvrD, DNA helicase II MDVSELLDSLNDKQRDVVAAPKQNMLILAGAGSGKTRVLVQRIAWLMQVE GISSHSILAVTFTNKAAAEMRARVEQVTNGNTHGMWIGTFHGLAHRLLRM HFQEANLPQSFQVLDSDDQLRLIKRIVRSLELDEKKWPPKQFVWYINGKK DEGLRPQHIDAQFDPTEELFVKVYKAYQETCDRAGLVDFAELLLRAHELW LKNPALLDHYQQRFGHILVDEFQDTNAIQYAWLTMLGKARSKVMIVGDDD QSIYGWRGAKIENIERFLQEYDDAKTIRLEQNYRSTANILKSANQLICNN NNRMGKELWTDGEAGEKISIYTAFNEIDEARFIAGRIKQWRDDGGKLDEI AILYRSNAQSRLLEEALLQGQLPYRIYGGQRFFERQEIKDALAYMRLINN RDDDAAFERVINTPTRGIGNQTLSLVRDAARGLEVTMWQACQQMLKAEQL KGRGAKTITAFIQLIEQLEDDTTNLDLDQQANFIINHSGLKAMYQAEKGE RAAQRIENLNELVTACQTFESDPELAEEQTPLTAFLTHAALESGESQADE FEAAVQLMTMHSAKGLEFPLVFIAGLEEGMFPSQQSVEEIGRLEEERRLC YVGMTRAMSKLYLCHAESRRLYGQEKFHKASRFLRELPEDCIEEIRMQSQ VKRPSKVGKFSNTFTLETFENTGFKLGQQVKHAKFGEGVVLNYEGSGAQS RIQVNFADVGSKWLVVEYANLQAV >CPS_3538 xni, exodeoxyribonuclease IX MSAHLILIDALNLIRRVYAVQERPFIQIKQDHDDELSASTLKQVLFNTQN TCVNALIKIIDQHQPTHALTVFDSQEPCWRYQLFEGYKKGRKKMPDHLAN KLIDIQDAFMEQGVDSLTSDEDEADDLIATLAVKMALHGQKVTIISTDKG FLPLLSPNIHIYDYFNRRYLDEEHVQSKFSVKTSQLIDFWTLTGDNTNKI EGVSGIGQVTAAKLLNQYGSLKAILEATDLKDSLAEKLTQSLEQMDLARK LLTLKQDIPLGFNLKDIRLTTSSSAHEINANINLTTDDKS >CPS_4244 xseA, exodeoxyribonuclease VII, large subunit MSQQHILQISELTKKVRFILESELNTVWLTGEVSNFIAASSGHWYLSLKD AKSQVKCAMFKGSNRRVRLSTGAAPSNGQQVLVRAKVSLYEPRGDFQLII EHMEDAGTGLLRQQYEQLKNKLNNQGIFDLSRKQQLPKNISCVGIVTSPT GAAVKDILTVLKRRNPNIKAIIYPSLVQGEYAQGDICHAIESANSRNECD VLIVGRGGGSLEDLWPFNEESVVHAIYKSALPIISAVGHEIDTTLSDYVA DLRAPTPSAAAELVSSDSSELLNQLLMFKQRLIKAQQNKLVYLGNEQSYL QHRLSQVHPEQQLQLQQQKADELSLRLKQAMKRNIEQVQSKPIQLSQRLL QQSPLKTIQLQQQKIDQNAHRITQAMQNSLQHNSEKFVHLIEQLQLVSPL ATIARGYSVTRNSKNEVISKTAQVKIDEEISVQLSDGHINARVI >CPS_1090 xseB, exodeoxyribonuclease VII, small subunit MAKKKLENLSFEESLNELDTIVQSLEQGELSLEESMTLFERGLNLSQLSQ VKLQAAEQKVQILLDKNGTAKLTDFDSSAGES >CPS_3173 xth, exodeoxyribonuclease III MKIISFNINGLRARLHQLQAIIDKHQPDIIGLQEIKVHDEAFPLEAVEAM GYHVYFHGQKAHYGVAMLCKKEAESVQRGFPTDDDEAQRRMIMVTTTNDK GEKVTVLNGYFPQGENISHETKYPYKRKFYKDLMTYLNDNHVNDENVVVM GDINISPQDLDIGIGDVNSKRWLKSGKCSFQPEEREWLTRLMDWGFVDTF RQLHPDTTERYSWFDYRSRGFDDNRGLRIDVVLATKNMAEQCIEADIDYE LRAIEKPSDHAPIWSTFS
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