Gene list
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COG category: Replication, recombination and repair
Organism: Colwellia psychrerythraea 34H, 34H; BAA-681
Number of genes found: 198
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| Colwellia psychrerythraea 34H, 34H; BAA-681 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | CPS_2963 | ISCps9, transposase orfA | SubName: Full=ISCps9, transposase orfA; | chromosome | CDS | 3103483 | 375 | - | 0.373333 |
| NA | CPS_2951 | DNA repair protein, RadC family protein | SubName: Full=DNA repair protein, RadC family protein; | chromosome | CDS | 3092249 | 477 | + | 0.392034 |
| NA | CPS_3353 | methylated-DNA--protein-cysteinemethyltransferase | SubName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; | chromosome | CDS | 3479997 | 849 | + | 0.404005 |
| NA | CPS_2616 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2718571 | 3732 | + | 0.364148 |
| NA | CPS_0155 | methylated-DNA--protein-cysteinemethyltransferase | RecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; | chromosome | CDS | 165803 | 549 | - | 0.393443 |
| NA | CPS_0894 | ISCps3, transposase orfB | SubName: Full=ISCps3, transposase orfB; | chromosome | CDS | 897465 | 888 | - | 0.413288 |
| NA | CPS_0185 | putative site-specific recombinase, phage integrase family | SubName: Full=Putative site-specific recombinase, phage integrase family; | chromosome | CDS | 195714 | 3321 | + | 0.423366 |
| NA | CPS_1590 | ATP-dependent RNA helicase, DEAD box family | SubName: Full=ATP-dependent RNA helicase, DEAD box family; | chromosome | CDS | 1635005 | 1368 | + | 0.383772 |
| NA | CPS_3670 | protein kinase domain protein | SubName: Full=Protein kinase domain protein; | chromosome | CDS | 3812919 | 2346 | + | 0.368286 |
| NA | CPS_1157 | MutT/NUDIX family protein | SubName: Full=MutT/NUDIX family protein; | chromosome | CDS | 1180358 | 543 | - | 0.401473 |
| NA | CPS_0780 | exonuclease | SubName: Full=Exonuclease; EC=2.7.7.7; | chromosome | CDS | 799355 | 612 | + | 0.393791 |
| NA | CPS_0188 | putative helicase | SubName: Full=Putative helicase; | chromosome | CDS | 200194 | 2367 | + | 0.411069 |
| NA | CPS_1896 | ISCps9, transposase orfB, truncated | chromosome | CDS | 1956282 | 801 | + | 0.398252 | |
| NA | CPS_0999 | serine/threonine protein kinase domain protein | SubName: Full=Serine/threonine protein kinase domain protein; | chromosome | CDS | 1019397 | 2691 | + | 0.371981 |
| NA | CPS_1489 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1531755 | 462 | + | 0.378788 |
| NA | CPS_3121 | ISCps9, transposase orfA | SubName: Full=ISCps9, transposase orfA; | chromosome | CDS | 3261491 | 375 | + | 0.373333 |
| NA | CPS_1251 | conserved hypothetical protein TIGR00250 | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 1282425 | 447 | - | 0.407159 |
| NA | CPS_0042 | ATP-dependent RNA helicase, DEAD box family | SubName: Full=ATP-dependent RNA helicase, DEAD box family; | chromosome | CDS | 42397 | 1263 | + | 0.372922 |
| NA | CPS_0367 | putative phage replication initiation factor | SubName: Full=Putative phage replication initiation factor; SubName: Full=Putative phage replication initiation protein; | chromosome | CDS | 372379 | 1434 | - | 0.401674 |
| NA | CPS_0377 | ISCps1, transposase | SubName: Full=ISCps1, transposase; | chromosome | CDS | 378402 | 1029 | + | 0.394558 |
| NA | CPS_2917 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 3050704 | 1248 | + | 0.404647 |
| NA | CPS_3998 | site-specific recombinase, phage integrase family, truncated | chromosome | CDS | 4197953 | 225 | - | 0.404444 | |
| NA | CPS_2141 | comE domain protein | SubName: Full=ComE domain protein; | chromosome | CDS | 2241894 | 339 | + | 0.359882 |
| NA | CPS_2418 | putative ATP-dependent DNA helicase | SubName: Full=Putative ATP-dependent DNA helicase; | chromosome | CDS | 2529059 | 1869 | + | 0.325843 |
| NA | CPS_4987 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5303600 | 732 | + | 0.375683 |
| NA | CPS_0490 | putative site-specific recombinase | SubName: Full=Putative site-specific recombinase; | chromosome | CDS | 493953 | 2046 | + | 0.308895 |
| NA | CPS_3215 | putative ATP-dependent RNA helicase SrmB | SubName: Full=Putative ATP-dependent RNA helicase SrmB; | chromosome | CDS | 3347779 | 1347 | - | 0.370453 |
| NA | CPS_2945 | putative DEAD/DEAH box helicase | SubName: Full=Putative DEAD/DEAH box helicase; | chromosome | CDS | 3083918 | 2532 | - | 0.348341 |
| NA | CPS_1685 | ISCps9, transposase orfA | SubName: Full=ISCps9, transposase orfA; | chromosome | CDS | 1727873 | 375 | + | 0.373333 |
| NA | CPS_2410 | ISCps2, transposase orfA | SubName: Full=ISCps2, transposase orfA; | chromosome | CDS | 2521493 | 297 | - | 0.400673 |
| NA | CPS_1302 | putative helicase | SubName: Full=Putative helicase; | chromosome | CDS | 1342562 | 1551 | + | 0.4049 |
| NA | CPS_2305 | hydrolase, TatD family | SubName: Full=Hydrolase, TatD family; | chromosome | CDS | 2403802 | 768 | + | 0.38151 |
| NA | CPS_1686 | ISCps9, transposase orfB | SubName: Full=ISCps9, transposase orfB; | chromosome | CDS | 1728178 | 888 | + | 0.403153 |
| NA | CPS_3886 | ATP-dependent helicase | SubName: Full=ATP-dependent helicase; | chromosome | CDS | 4058349 | 1944 | - | 0.40535 |
| NA | CPS_2958 | ISCps3, transposase orfB | SubName: Full=ISCps3, transposase orfB; | chromosome | CDS | 3100465 | 888 | - | 0.413288 |
| NA | CPS_2408 | conserved domain protein | SubName: Full=Conserved domain protein; | chromosome | CDS | 2520332 | 153 | + | 0.352941 |
| NA | CPS_0024 | topoisomerase DNA-binding C4 zinc finger domain protein | SubName: Full=Topoisomerase DNA-binding C4 zinc finger domain protein; | chromosome | CDS | 28415 | 561 | + | 0.379679 |
| NA | CPS_2959 | ISCps3, transposase orfA | SubName: Full=ISCps3, transposase orfA; | chromosome | CDS | 3101283 | 363 | - | 0.404959 |
| NA | CPS_4446 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4682776 | 711 | - | 0.369902 |
| NA | CPS_0156 | putative methyltransferase | RecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; | chromosome | CDS | 166384 | 639 | - | 0.383412 |
| NA | CPS_2899 | MutT/nudix family protein | SubName: Full=MutT/nudix family protein; | chromosome | CDS | 3033563 | 513 | + | 0.362573 |
| NA | CPS_3122 | ISCps9, transposase orfB | SubName: Full=ISCps9, transposase orfB; | chromosome | CDS | 3261796 | 888 | + | 0.403153 |
| NA | CPS_0386 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 387059 | 1374 | + | 0.411208 |
| NA | CPS_1109 | hydrolase, TatD family | SubName: Full=Hydrolase, TatD family; | chromosome | CDS | 1132578 | 903 | - | 0.395349 |
| NA | CPS_2015 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 2088172 | 1173 | + | 0.358056 |
| NA | CPS_2566 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2670395 | 2718 | + | 0.35872 |
| NA | CPS_0900 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 901027 | 1005 | + | 0.337313 |
| NA | CPS_3583 | putative methylated-DNA binding protein | SubName: Full=Putative methylated-DNA binding protein; | chromosome | CDS | 3720228 | 378 | - | 0.407407 |
| NA | CPS_0152 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 161228 | 1821 | + | 0.345964 |
| NA | CPS_3131 | phage SPO1 DNA polymerase-related protein | SubName: Full=Phage SPO1 DNA polymerase-related protein; | chromosome | CDS | 3266737 | 579 | + | 0.442142 |
| NA | CPS_4401 | endo/excinuclease amino terminal domain protein | SubName: Full=Endo/excinuclease amino terminal domain protein; | chromosome | CDS | 4636231 | 288 | + | 0.413194 |
| NA | CPS_1409 | ISCps4, transposase | SubName: Full=ISCps4, transposase; | chromosome | CDS | 1450194 | 1245 | - | 0.396787 |
| NA | CPS_1822 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1872635 | 720 | + | 0.326389 |
| NA | CPS_4955 | exonuclase | SubName: Full=Exonuclase; | chromosome | CDS | 5258738 | 687 | + | 0.394469 |
| NA | CPS_4237 | RecQ domain protein | SubName: Full=RecQ domain protein; | chromosome | CDS | 4462873 | 2073 | - | 0.387844 |
| NA | CPS_0184 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 194250 | 1449 | + | 0.41891 |
| NA | CPS_2172 | ISCps8, transposase | SubName: Full=ISCps8, transposase; | chromosome | CDS | 2274410 | 1155 | + | 0.408658 |
| NA | CPS_2634 | extracellular ribonuclease/nuclease fusion protein | SubName: Full=Extracellular ribonuclease/nuclease fusion protein; | chromosome | CDS | 2734836 | 3933 | - | 0.391559 |
| NA | CPS_3967 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4156045 | 1110 | - | 0.383784 |
| NA | CPS_3684 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3828936 | 1689 | + | 0.365305 |
| NA | CPS_2953 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 3093393 | 561 | + | 0.370766 |
| NA | CPS_3758 | putative primosomal replication protein N'' | SubName: Full=Putative primosomal replication protein N; | chromosome | CDS | 3920249 | 684 | + | 0.361111 |
| NA | CPS_0787 | transposase, IS110 family, truncated | chromosome | CDS | 806562 | 276 | - | 0.431159 | |
| NA | CPS_2955 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3096104 | 1467 | - | 0.355147 |
| NA | CPS_1794 | protein kinase domain protein | SubName: Full=Protein kinase domain protein; | chromosome | CDS | 1835804 | 684 | + | 0.353801 |
| NA | CPS_0022 | putative DNA processing protein DprA | SubName: Full=Putative DNA processing protein DprA; | chromosome | CDS | 26651 | 1152 | + | 0.40191 |
| NA | CPS_2416 | DNA-binding protein | SubName: Full=DNA-binding protein; | chromosome | CDS | 2525968 | 804 | + | 0.354478 |
| NA | CPS_3401 | ATP-dependent RNA helicase, DEAD box family | SubName: Full=ATP-dependent RNA helicase, DEAD box family; | chromosome | CDS | 3528626 | 1299 | - | 0.425712 |
| NA | CPS_2062 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 2143684 | 597 | - | 0.345059 |
| NA | CPS_1125 | ATP-dependent RNA helicase, DEAD box family | SubName: Full=ATP-dependent RNA helicase, DEAD box family; | chromosome | CDS | 1147766 | 1401 | + | 0.401856 |
| NA | CPS_2742 | ISCps7, transposase | SubName: Full=ISCps7, transposase; | chromosome | CDS | 2857807 | 954 | + | 0.386792 |
| NA | CPS_0137 | single-strand binding protein family protein | SubName: Full=Single-strand binding protein family protein; | chromosome | CDS | 145388 | 699 | - | 0.354793 |
| NA | CPS_1289 | ISCps2, transposase orfB | SubName: Full=ISCps2, transposase orfB; | chromosome | CDS | 1332738 | 819 | - | 0.404151 |
| NA | CPS_3194 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3324669 | 708 | - | 0.368644 |
| NA | CPS_0895 | ISCps3, transposase orfA | SubName: Full=ISCps3, transposase orfA; | chromosome | CDS | 898283 | 363 | - | 0.404959 |
| NA | CPS_0887 | putative phage replication initiation protein | SubName: Full=Putative phage replication initiation factor; SubName: Full=Putative phage replication initiation protein; | chromosome | CDS | 894216 | 1434 | - | 0.402371 |
| NA | CPS_2243 | ATP-dependent helicase HrpA | SubName: Full=ATP-dependent helicase HrpA; | chromosome | CDS | 2343055 | 4128 | + | 0.382267 |
| NA | CPS_0354 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 364395 | 1068 | + | 0.36985 |
| NA | CPS_2857 | ISCps9, transposase orfB | SubName: Full=ISCps9, transposase orfB; | chromosome | CDS | 2986149 | 888 | - | 0.403153 |
| NA | CPS_3615 | MutT/nudix family protein | SubName: Full=MutT/nudix family protein; | chromosome | CDS | 3752348 | 576 | + | 0.395833 |
| NA | CPS_1804 | protein kinase domain protein | SubName: Full=Protein kinase domain protein; | chromosome | CDS | 1856341 | 714 | - | 0.358543 |
| NA | CPS_4949 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; | chromosome | CDS | 5249999 | 1833 | - | 0.403164 |
| NA | CPS_1290 | ISCps2, transposase orfA | SubName: Full=ISCps2, transposase orfA; | chromosome | CDS | 1333601 | 297 | - | 0.393939 |
| NA | CPS_1418 | ATP-dependent RNA helicase, DEAD box family | SubName: Full=ATP-dependent RNA helicase, DEAD box family; | chromosome | CDS | 1457739 | 1206 | + | 0.397181 |
| NA | CPS_3374 | putative helicase | SubName: Full=Putative helicase; | chromosome | CDS | 3503664 | 3054 | + | 0.389653 |
| NA | CPS_3059 | ISCps4, transposase | SubName: Full=ISCps4, transposase; | chromosome | CDS | 3195809 | 1245 | + | 0.395984 |
| NA | CPS_2658 | ATP-dependent RNA helicase, DEAD box family | SubName: Full=ATP-dependent RNA helicase, DEAD box family; | chromosome | CDS | 2770110 | 1200 | + | 0.376667 |
| NA | CPS_1495 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1537131 | 378 | - | 0.31746 |
| NA | CPS_1707 | putative protein kinase | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1752024 | 1836 | + | 0.398148 |
| NA | CPS_0501 | haemagglutinin associated protein | SubName: Full=Haemagglutinin associated protein; | chromosome | CDS | 504750 | 693 | - | 0.330447 |
| NA | CPS_2355 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 2448298 | 1005 | - | 0.391045 |
| NA | CPS_2962 | ISCps9, transposase orfB | SubName: Full=ISCps9, transposase orfB; | chromosome | CDS | 3102665 | 888 | - | 0.403153 |
| NA | CPS_2858 | ISCps9, transposase orfA | SubName: Full=ISCps9, transposase orfA; | chromosome | CDS | 2986967 | 375 | - | 0.373333 |
| NA | CPS_2629 | site-specific recombinase, phage integrase family | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome | CDS | 2732472 | 1257 | + | 0.377088 |
| NA | CPS_4217 | oxidoreductase, 2OG-Fe(II) oxygenase family | SubName: Full=Oxidoreductase, 2OG-Fe(II) oxygenase family; | chromosome | CDS | 4439697 | 576 | - | 0.402778 |
| NA | CPS_1800 | ISCps10, transposase | SubName: Full=ISCps10, transposase; | chromosome | CDS | 1852322 | 432 | + | 0.388889 |
| NA | CPS_2757 | ATPase, AAA family | SubName: Full=ATPase, AAA family; | chromosome | CDS | 2869625 | 1536 | - | 0.425781 |
| NA | CPS_4433 | conserved hypothetical protein TIGR00252 | RecName: Full=UPF0102 protein CPS_4433; | chromosome | CDS | 4673524 | 390 | + | 0.35641 |
| NA | CPS_0183 | DNA repair protein RadC, n-terminal fragment | SubName: Full=DNA repair protein RadC, n-terminal; | chromosome | CDS | 193642 | 495 | + | 0.375758 |
| NA | CPS_1308 | endonuclease/exonuclease/phosphatase family protein | SubName: Full=Endonuclease/exonuclease/phosphatase family protein; | chromosome | CDS | 1347758 | 1233 | - | 0.388483 |
| NA | CPS_3336 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3460595 | 456 | - | 0.385965 |
| NA | CPS_3375 | ISCps6, transposase | SubName: Full=ISCps6, transposase; | chromosome | CDS | 3507040 | 1434 | - | 0.438633 |
| NA | CPS_3595 | MutT/nudix family protein | SubName: Full=MutT/nudix family protein; | chromosome | CDS | 3732698 | 1047 | - | 0.410697 |
| NA | CPS_3101 | endo/excinuclease amino terminal domain protein | SubName: Full=Endo/excinuclease amino terminal domain protein; | chromosome | CDS | 3231435 | 288 | - | 0.361111 |
| NA | CPS_4852 | ISCps5, transposase | SubName: Full=ISCps5, transposase; | chromosome | CDS | 5144483 | 1257 | + | 0.386635 |
| NA | CPS_1152 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1173869 | 990 | - | 0.361616 |
| NA | CPS_0149 | leucine-rich repeat protein | SubName: Full=Leucine-rich repeat protein; | chromosome | CDS | 158416 | 1311 | - | 0.384439 |
| NA | CPS_3404 | Snf2 family protein | SubName: Full=Snf2 family protein; | chromosome | CDS | 3530914 | 3405 | + | 0.380323 |
| NA | CPS_2417 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2526811 | 2247 | + | 0.342234 |
| NA | CPS_3321 | ISCps4, transposase | SubName: Full=ISCps4, transposase; | chromosome | CDS | 3444695 | 1245 | + | 0.396787 |
| NA | CPS_2946 | SNF2 family protein | SubName: Full=SNF2 family protein; | chromosome | CDS | 3086449 | 3075 | - | 0.354797 |
| dam | CPS_0475 | DNA adenine methylase | SubName: Full=DNA adenine methylase; EC=2.1.1.72; | chromosome | CDS | 478317 | 822 | + | 0.346715 |
| dbpA | CPS_1540 | ATP-dependent RNA helicase DbpA | SubName: Full=ATP-dependent RNA helicase DbpA; | chromosome | CDS | 1582295 | 1407 | + | 0.398721 |
| deaD | CPS_1726 | RNA helicase DeaD | SubName: Full=RNA helicase DeaD; | chromosome | CDS | 1775322 | 1836 | + | 0.406318 |
| dinB | CPS_1040 | DNA polymerase IV | RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; | chromosome | CDS | 1067233 | 1059 | + | 0.385269 |
| dinG | CPS_2272 | ATP-dependent helicase DinG | SubName: Full=ATP-dependent helicase DinG; | chromosome | CDS | 2367295 | 2139 | - | 0.387097 |
| dnaA | CPS_0001 | chromosomal replication initiator protein DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 72 | 1386 | + | 0.368687 |
| dnaB | CPS_4361 | replicative DNA helicase | SubName: Full=Replicative DNA helicase; EC=3.6.1.-; | chromosome | CDS | 4592913 | 1419 | - | 0.422128 |
| dnaE | CPS_1570 | DNA polymerase III, alpha subunit | SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; | chromosome | CDS | 1613253 | 3561 | + | 0.403819 |
| dnaG | CPS_4335 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 4568776 | 1758 | - | 0.4124 |
| dnaN | CPS_0002 | DNA polymerase III, beta subunit | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 1496 | 1104 | + | 0.354167 |
| dnaQ | CPS_2255 | DNA polymerase III, epsilon subunit | SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7; | chromosome | CDS | 2353720 | 771 | + | 0.391699 |
| dnaX | CPS_3744 | DNA polymerase III, gamma/tau subunit | SubName: Full=DNA polymerase III, gamma/tau subunit; EC=2.7.7.7; | chromosome | CDS | 3906377 | 2148 | - | 0.391993 |
| fis | CPS_0551 | DNA-binding protein Fis | SubName: Full=DNA-binding protein Fis; | chromosome | CDS | 549047 | 288 | + | 0.385417 |
| gyrA | CPS_2331 | DNA gyrase, A subunit | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 2427346 | 2727 | + | 0.392739 |
| gyrB | CPS_0004 | DNA gyrase, B subunit | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 3778 | 2445 | + | 0.37955 |
| helD | CPS_2454 | helicase IV | SubName: Full=Helicase IV; EC=3.6.1.-; | chromosome | CDS | 2572199 | 3129 | + | 0.379035 |
| hepA | CPS_4519 | RNA polymerase-associated protein HepA | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 4768647 | 2928 | + | 0.391735 |
| holA | CPS_1720 | DNA polymerase III, delta subunit | SubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; | chromosome | CDS | 1766654 | 1065 | - | 0.381221 |
| holB | CPS_2303 | DNA polymerase III, delta prime subunit | SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7; | chromosome | CDS | 2402386 | 996 | + | 0.360442 |
| holC | CPS_0739 | DNA polymerase III, chi subunit | SubName: Full=DNA polymerase III, chi subunit; EC=2.7.7.7; | chromosome | CDS | 741391 | 474 | - | 0.407173 |
| hrpB | CPS_4302 | ATP-dependent helicase HrpB | SubName: Full=ATP-dependent helicase HrpB; | chromosome | CDS | 4530598 | 2538 | - | 0.392829 |
| hupB1 | CPS_1873 | DNA-binding protein, HU family | SubName: Full=DNA-binding protein, HU family; | chromosome | CDS | 1926929 | 276 | - | 0.427536 |
| hupB2 | CPS_2063 | DNA-binding protein, HU family | SubName: Full=DNA-binding protein, HU family; | chromosome | CDS | 2144507 | 276 | - | 0.40942 |
| hupB3 | CPS_3781 | DNA-binding protein, HU family | SubName: Full=DNA-binding protein, HU family; | chromosome | CDS | 3946071 | 273 | - | 0.428571 |
| ihfA | CPS_2994 | integration host factor, alpha subunit | RecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; | chromosome | CDS | 3138269 | 294 | - | 0.421769 |
| ihfB | CPS_2336 | integration host factor, beta subunit | RecName: Full=Integration host factor subunit beta; Short=IHF-beta; | chromosome | CDS | 2435595 | 288 | + | 0.361111 |
| kdkA | CPS_0117 | 3-deoxy-D-manno-octulosonic acid kinase | RecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; | chromosome | CDS | 122866 | 777 | - | 0.413127 |
| lig | CPS_4404 | DNA ligase, ATP-dependent | SubName: Full=DNA ligase, ATP-dependent; EC=6.5.1.1; | chromosome | CDS | 4638011 | 879 | + | 0.397042 |
| ligA | CPS_3466 | DNA ligase, NAD-dependent | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 3603522 | 2070 | - | 0.402899 |
| mfd | CPS_2139 | transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 2237155 | 3624 | - | 0.403974 |
| mutH | CPS_3626 | DNA mismatch repair protein MutH | RecName: Full=DNA mismatch repair protein MutH; AltName: Full=Methyl-directed mismatch repair protein; | chromosome | CDS | 3763833 | 669 | + | 0.428999 |
| mutL | CPS_0323 | DNA mismatch repair protein MutL | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 333383 | 1959 | + | 0.389995 |
| mutM | CPS_0212 | formamidopyrimidine-DNA glycosylase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome | CDS | 219444 | 816 | + | 0.421569 |
| mutS | CPS_4137 | DNA mismatch repair protein MutS | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 4352552 | 2619 | + | 0.415044 |
| mutT | CPS_4453 | mutator mutT protein | SubName: Full=Mutator mutT protein; EC=3.6.1.-; | chromosome | CDS | 4690027 | 435 | - | 0.416092 |
| mutY | CPS_4148 | A/G-specific adenine glycosylase | SubName: Full=A/G-specific adenine glycosylase; EC=3.2.2.-; | chromosome | CDS | 4362430 | 1089 | + | 0.389348 |
| nth | CPS_2193 | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 2289082 | 663 | - | 0.395173 |
| nudE | CPS_0424 | ADP compounds hydrolase nudE | SubName: Full=ADP compounds hydrolase nudE; EC=3.6.1.-; | chromosome | CDS | 429169 | 552 | + | 0.416667 |
| nudF | CPS_4180 | ADP-ribose pyrophosphatase | SubName: Full=ADP-ribose pyrophosphatase; EC=3.6.1.13; | chromosome | CDS | 4399811 | 645 | - | 0.39845 |
| nudH | CPS_3625 | (di)nucleoside polyphosphate hydrolase | RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome | CDS | 3763166 | 516 | - | 0.401163 |
| parC | CPS_4171 | DNA topoisomerase IV, A subunit | RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; | chromosome | CDS | 4387770 | 2310 | - | 0.420346 |
| parE | CPS_4176 | DNA topoisomerase IV, B subunit | RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; | chromosome | CDS | 4395658 | 1887 | - | 0.415474 |
| phrB | CPS_1380 | deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase; EC=4.1.99.3; | chromosome | CDS | 1420655 | 1413 | + | 0.389243 |
| polA | CPS_4978 | DNA polymerase I | SubName: Full=DNA polymerase I; EC=2.7.7.7; | chromosome | CDS | 5288747 | 2811 | - | 0.403771 |
| polB | CPS_2273 | DNA polymerase II | RecName: Full=DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 2369524 | 2457 | + | 0.366707 |
| priA | CPS_4366 | primosomal protein N' | SubName: Full=Primosomal protein N; | chromosome | CDS | 4597556 | 2211 | + | 0.40796 |
| priB | CPS_0416 | primosomal replication protein N | RecName: Full=Primosomal replication protein n; | chromosome | CDS | 423069 | 315 | + | 0.393651 |
| rdgC | CPS_1204 | recombination associated protein RdgC | RecName: Full=Recombination-associated protein RdgC; | chromosome | CDS | 1236024 | 924 | - | 0.36039 |
| recA | CPS_4134 | recA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 4349468 | 1038 | - | 0.382466 |
| recB | CPS_2768 | exodeoxyribonuclease V, beta subunit | SubName: Full=Exodeoxyribonuclease V, beta subunit; EC=3.1.11.5; | chromosome | CDS | 2883240 | 3861 | - | 0.384097 |
| recC | CPS_2769 | exodeoxyribonuclease V, gamma subunit | SubName: Full=Exodeoxyribonuclease V, gamma subunit; EC=3.1.11.5; | chromosome | CDS | 2887100 | 3597 | - | 0.396441 |
| recD | CPS_2767 | exodeoxyribonuclease V, alpha subunit | SubName: Full=Exodeoxyribonuclease V, alpha subunit; EC=3.1.11.5; | chromosome | CDS | 2880929 | 2310 | - | 0.405195 |
| recF | CPS_0003 | DNA replication and repair protein RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 2635 | 1134 | + | 0.337743 |
| recG | CPS_4976 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; | chromosome | CDS | 5286333 | 2094 | + | 0.425979 |
| recJ | CPS_4094 | single-stranded-DNA-specific exonuclease RecJ | SubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; | chromosome | CDS | 4308214 | 1755 | - | 0.403989 |
| recN | CPS_3825 | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 3992341 | 1686 | + | 0.384935 |
| recO | CPS_4120 | recombination protein O | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome | CDS | 4336301 | 711 | - | 0.360056 |
| recQ | CPS_0083 | ATP-dependent DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase RecQ; EC=3.6.1.-; | chromosome | CDS | 86632 | 1848 | + | 0.416667 |
| recR | CPS_3690 | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 3835849 | 606 | - | 0.419142 |
| rep | CPS_0300 | ATP-dependent DNA helicase Rep | SubName: Full=ATP-dependent DNA helicase Rep; EC=3.6.1.-; | chromosome | CDS | 308267 | 2034 | - | 0.406096 |
| rhlB | CPS_0174 | ATP-dependent RNA helicase RhlB | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 182390 | 1287 | - | 0.393162 |
| rnhB | CPS_1569 | ribonuclease HII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 1612598 | 654 | + | 0.408257 |
| rnt | CPS_3473 | ribonuclease T | RecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; | chromosome | CDS | 3611793 | 696 | + | 0.392241 |
| ruvA | CPS_2116 | Holliday junction DNA helicase RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 2204993 | 636 | + | 0.380503 |
| ruvB | CPS_2117 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 2205665 | 1014 | + | 0.411243 |
| ruvC | CPS_2115 | crossover junction endodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 2204225 | 528 | + | 0.431818 |
| sbcB | CPS_2014 | exodeoxyribonuclease I | RecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; | chromosome | CDS | 2086576 | 1464 | - | 0.400956 |
| sbcC | CPS_2848 | exonuclease SbcC | SubName: Full=Exonuclease SbcC; | chromosome | CDS | 2975051 | 3927 | - | 0.395467 |
| sbcD | CPS_2849 | exonuclease SbcD | SubName: Full=Exonuclease SbcD; | chromosome | CDS | 2978974 | 1521 | - | 0.429323 |
| seqA | CPS_1580 | seqA protein | RecName: Full=Negative modulator of initiation of replication; | chromosome | CDS | 1624503 | 603 | + | 0.374793 |
| srmB | CPS_4097 | ATP-dependent RNA helicase SrmB | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome | CDS | 4311925 | 1293 | + | 0.390565 |
| ssb | CPS_0930 | single-strand binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 935811 | 702 | + | 0.435897 |
| tag | CPS_2351 | DNA-3-methyladenine glycosylase I | SubName: Full=DNA-3-methyladenine glycosylase I; EC=3.2.2.20; | chromosome | CDS | 2447158 | 585 | - | 0.365812 |
| tatD | CPS_0167 | deoxyribonuclease TatD | SubName: Full=Deoxyribonuclease TatD; EC=3.1.21.-; | chromosome | CDS | 176756 | 813 | + | 0.389914 |
| topA | CPS_1197 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome | CDS | 1227821 | 2700 | + | 0.416296 |
| topB | CPS_4792 | DNA topoisomerase III | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | chromosome | CDS | 5077284 | 1950 | + | 0.406667 |
| umuC1 | CPS_1636 | umuC protein | SubName: Full=UmuC protein; | chromosome | CDS | 1687207 | 1254 | + | 0.409888 |
| umuC2 | CPS_2682 | umuC protein | SubName: Full=UmuC protein; | chromosome | CDS | 2790567 | 1257 | - | 0.395386 |
| ung | CPS_4288 | uracil-DNA glycosylase | RecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; | chromosome | CDS | 4517517 | 678 | - | 0.40413 |
| uvrA | CPS_0920 | excinuclease ABC, A subunit | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 923476 | 2832 | - | 0.412429 |
| uvrB | CPS_2887 | excinuclease ABC, B subunit | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 3020946 | 2022 | - | 0.396637 |
| uvrC | CPS_3270 | excinuclease ABC, C subunit | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 3399720 | 1920 | - | 0.393229 |
| uvrD | CPS_0080 | DNA helicase II | SubName: Full=DNA helicase II; EC=3.6.1.-; | chromosome | CDS | 81800 | 2175 | + | 0.415172 |
| xni | CPS_3538 | exodeoxyribonuclease IX | RecName: Full=Flap endonuclease Xni; Short=FEN; EC=3.1.-.-; | chromosome | CDS | 3679020 | 873 | + | 0.375716 |
| xseA | CPS_4244 | exodeoxyribonuclease VII, large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; | chromosome | CDS | 4471685 | 1335 | + | 0.379026 |
| xseB | CPS_1090 | exodeoxyribonuclease VII, small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome | CDS | 1110413 | 249 | - | 0.369478 |
| xth | CPS_3173 | exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; | chromosome | CDS | 3305759 | 807 | + | 0.385378 |
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