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2024-05-02 16:48:48

Gene list

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COG category: Replication, recombination and repair
Organism: Psychrobacter arcticum 273-4, 273-4

Number of genes found: 156

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Psychrobacter arcticum 273-4, 273-4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA Psyc_1459 probable transposase IS3/IS150/IS904 familychromosome CDS1770544 786 + 0.389313
NA Psyc_0636 transposase, IS3/IS911familychromosome CDS756847 267 + 0.456929
NA Psyc_0937 putative transposase OrfBchromosome CDS1123087 705 + 0.394326
NA Psyc_1611 possible DNA helicase: AAA ATPasechromosome CDS1989456 1962 - 0.440367
NA Psyc_0885 transposase, mutator familychromosome CDS1057616 1215 - 0.43786
NA Psyc_2003 possible DNA helicasechromosome CDS2469003 1500 + 0.467333
NA Psyc_0980 probable C-5 cytosine-specific DNA methylasechromosome CDS1175124 1467 - 0.442399
NA Psyc_0017 transposase IS30 familychromosome CDS20981 819 + 0.446886
NA Psyc_1564 possible methyltransferasechromosome CDS1916727 690 + 0.444928
NA Psyc_0886 probable phage integrasechromosome CDS1058936 1365 - 0.424908
NA Psyc_0936 probable transposase orfAchromosome CDS1122572 381 + 0.430446
NA Psyc_0016 putative transposase OrfA, IS3/IS911familychromosome CDS20634 297 + 0.447811
NA Psyc_0447 possible RNA-directed DNA polymerase (Reverse transcriptase)chromosome CDS557921 1089 - 0.419651
NA Psyc_1615 hypothetical proteinchromosome CDS1995727 990 - 0.411111
NA Psyc_1622 probable DnaA family proteinchromosome CDS2004244 813 - 0.452645
NA Psyc_0963 probable site-specific recombinasechromosome CDS1149562 2481 - 0.428456
NA Psyc_1787 transposase, orfA, IS3/IS911familychromosome CDS2198848 519 + 0.460501
NA Psyc_1034 probable phage integrasechromosome CDS1222376 1335 - 0.436704
NA Psyc_0536 probable transposase, IS1329/IS3/IS911 familychromosome CDS630959 312 + 0.461538
NA Psyc_1709 putative transposasechromosome CDS2111001 369 - 0.417344
NA Psyc_0645 probable transposase IS30 familychromosome CDS765000 903 + 0.420819
NA Psyc_0076 hypothetical proteinchromosome CDS86461 606 - 0.419142
NA Psyc_0856 hypothetical proteinchromosome CDS1024632 216 - 0.407407
NA Psyc_1347 probable rep helicase, single-stranded DNA-dependent ATPase proteinchromosome CDS1624474 465 - 0.417204
NA Psyc_1908 conserved hypothetical proteinchromosome CDS2356328 522 - 0.409962
NA Psyc_2097 hypothetical proteinchromosome CDS2579400 309 + 0.488673
NA Psyc_1291 possible exonucleasechromosome CDS1554649 1551 + 0.450032
NA Psyc_0921 putative Hfq family proteinchromosome CDS1104622 552 + 0.471014
NA Psyc_1082 possible ATP-dependent DEAD/DEAH box RNA-helicasechromosome CDS1292149 1704 + 0.477113
NA Psyc_1210 hypothetical proteinchromosome CDS1453290 1119 - 0.313673
NA Psyc_0345 conserved hypothetical proteinchromosome CDS428425 816 - 0.444853
NA Psyc_1688 putative transposase OrfA, IS3/IS911familychromosome CDS2090613 297 - 0.447811
NA Psyc_0479 possible phage integrasechromosome CDS584020 1074 + 0.459963
NA Psyc_0094 conserved hypothetical proteinchromosome CDS108765 1290 - 0.472868
NA Psyc_1770 hypothetical proteinchromosome CDS2180879 444 + 0.400901
NA Psyc_0912 probable ribonuclease HIIchromosome CDS1094240 864 + 0.434028
NA Psyc_1370 possible phage integrasechromosome CDS1653540 1272 + 0.371855
NA Psyc_2085 probable DNA helicasechromosome CDS2563238 2427 - 0.478368
NA Psyc_1469 conserved Hypothetical proteinchromosome CDS1786000 876 + 0.46347
NA Psyc_1452 probable transposase, IS1329/IS3/IS911 familychromosome CDS1762694 312 + 0.461538
NA Psyc_0866 conserved hypothetical proteinchromosome CDS1033154 1125 + 0.476444
NA Psyc_1994 histone-like bacterial DNA-binding proteinchromosome CDS2460454 300 - 0.456667
NA Psyc_0018 hypothetical proteinchromosome CDS21800 651 - 0.327189
NA Psyc_0639 transposase, IS3/IS911familychromosome CDS760140 267 + 0.456929
NA Psyc_1633 putative ribonuclease T:Exonucleasechromosome CDS2019038 720 + 0.436111
NA Psyc_0637 transposase OrfBchromosome CDS757185 750 + 0.426667
NA Psyc_0644 putative transposase OrfA, IS3/IS911familychromosome CDS764656 300 + 0.436667
NA Psyc_0465 possible phage terminase, small subunitchromosome CDS573711 474 - 0.518987
NA Psyc_0831 probable NUDIX hydrolasechromosome CDS997970 1077 - 0.460539
NA Psyc_1966 conserved hypothetical proteinchromosome CDS2426328 720 - 0.394444
NA Psyc_0640 transposase OrfBchromosome CDS760478 750 + 0.426667
NA Psyc_0243 conserved hypothetical proteinchromosome CDS290109 537 - 0.396648
NA Psyc_1983 transposase, mutator familychromosome CDS2445353 1215 + 0.43786
NA Psyc_1375 probable transposase, ISSod6chromosome CDS1659795 750 - 0.430667
NA Psyc_0849 transposase OrfBchromosome CDS1017662 750 - 0.426667
NA Psyc_0863 probable transposase orfABchromosome CDS1031429 810 - 0.434568
NA Psyc_0539 putative transposase OrfA, IS3/IS911familychromosome CDS632473 276 + 0.431159
NA Psyc_1788 probable transposase IS3/IS150/IS904 familychromosome CDS2199408 786 + 0.390585
NA Psyc_1298 hypothetical proteinchromosome CDS1562781 396 + 0.325758
NA Psyc_0361 hypothetical proteinchromosome CDS449214 213 - 0.375587
NA Psyc_1104 hypothetical proteinchromosome CDS1315404 363 + 0.391185
NA Psyc_1682 probable Mg-dependent deoxyribonuclease, TatD familychromosome CDS2081409 1008 - 0.428571
NA Psyc_1958 putative transposasechromosome CDS2411722 141 - 0.411348
NA Psyc_0190 hypothetical proteinchromosome CDS227710 180 + 0.444444
NA Psyc_1292 hypothetical proteinchromosome CDS1556388 246 + 0.430894
NA Psyc_0056 conserved hypothetical proteinchromosome CDS62796 534 - 0.440075
NA Psyc_0850 transposase, IS3/IS911 familychromosome CDS1018483 267 - 0.441948
NA Psyc_1458 transposase, orfA, IS3/IS911 familychromosome CDS1769984 519 + 0.458574
NA Psyc_0935 putative methylated-DNA-(protein)-cysteine S-methyltransferasechromosome CDS1121876 573 + 0.415358
NA Psyc_0537 probable transposase orfABchromosome CDS631333 810 + 0.434568
NA Psyc_1124 hypothetical proteinchromosome CDS1339113 669 + 0.403587
NA Psyc_1493 putative histone-like bacterial DNA-binding proteinchromosome CDS1812600 249 - 0.473896
NA Psyc_0864 probable transposase, IS1329/IS3/IS911 familychromosome CDS1032301 312 - 0.461538
NA Psyc_1840 possible MutT/nudix family proteinchromosome CDS2262931 738 - 0.490515
NA Psyc_1779 transposase IS3/IS911 familychromosome CDS2189355 267 - 0.41573
NA Psyc_0006 probable transposase IS3/IS150/IS904 familychromosome CDS8586 786 - 0.380407
NA Psyc_1445 conserved hypothetical proteinchromosome CDS1750440 504 + 0.450397
NA Psyc_0096 hypothetical proteinchromosome CDS110986 852 + 0.434272
NA Psyc_2102 probable transposase and inactivated derivativeschromosome CDS2599029 321 - 0.41433
NA Psyc_0994 conserved hypothetical proteinchromosome CDS1187937 345 + 0.423188
NA Psyc_1122 hypothetical proteinchromosome CDS1336805 294 - 0.414966
NA Psyc_0015 hypothetical proteinchromosome CDS19335 1287 - 0.305361
NA Psyc_1687 probable transposase IS30 familychromosome CDS2089744 819 - 0.446886
NA Psyc_0317 hypothetical proteinchromosome CDS389517 936 + 0.32906
NA Psyc_0982 probable phage-related proteinchromosome CDS1177957 1017 - 0.481809
NA Psyc_0423 probable transposase ISSod6chromosome CDS527666 429 - 0.431235
NA Psyc_0534 transposase, mutator familychromosome CDS628566 1209 - 0.448304
NA Psyc_1453 probable transposase orfABchromosome CDS1763068 810 + 0.434568
NA Psyc_0007 transposase, orfA, IS3/IS911 familychromosome CDS9413 519 - 0.452794
NA Psyc_1444 putative transposasechromosome CDS1748905 327 + 0.428135
NA Psyc_1778 transposase OrfBchromosome CDS2188547 867 - 0.43714
NA Psyc_0599 probable transposase IS30 familychromosome CDS714070 879 + 0.447099
NA Psyc_0453 hypothetical proteinchromosome CDS565254 531 - 0.399247
NA Psyc_0192 putative transposase and inactivated derivativeschromosome CDS229127 141 - 0.382979
alkB Psyc_0082 probable alkylated DNA repair proteinchromosome CDS93498 618 - 0.414239
comEA Psyc_0113 putative competence DNA binding protein ComEAchromosome CDS135367 348 + 0.431034
dcm Psyc_0401 probable C-5 cytosine-specific DNA methylasechromosome CDS500671 1563 - 0.347409
dnaA Psyc_0001 probable bacterial chromosomal replication initiator proteinchromosome CDS520 1446 + 0.381743
dnaB Psyc_0959 putative DnaB helicasechromosome CDS1144536 1404 - 0.446581
dnaE Psyc_1177 putative DNA polymerase III, alpha subunitchromosome CDS1410102 3744 + 0.458868
dnaG Psyc_1259 probable DNA primasechromosome CDS1513396 2163 + 0.457235
dnaN Psyc_0002 probable DNA polymerase III, beta subunitchromosome CDS2125 1176 + 0.429422
dnaQ Psyc_0391 probable DNA polymerase III, epsilon subunitchromosome CDS489872 612 - 0.454248
dnaX Psyc_1055 probable DNA polymerase III, gamma/tau subunitschromosome CDS1252737 1896 + 0.44884
dprA Psyc_2135 possible DNA processing proteinchromosome CDS2635812 1218 - 0.469622
fis Psyc_1471 probable Fis-type transcriptional activatorchromosome CDS1788227 360 + 0.425
fpg Psyc_0342 probable formamidopyrimidine-DNA glycolasechromosome CDS422692 930 - 0.41828
gyrA Psyc_1543 putative DNA gyrase, subunit Achromosome CDS1887387 2793 - 0.461153
gyrB Psyc_0004 putative DNA gyrase, subunit Bchromosome CDS5179 2616 + 0.440749
hepA Psyc_1986 probable superfamily II DNA/RNA helicasechromosome CDS2449487 2949 - 0.48118
holA Psyc_0574 probable DNA polymerase III, delta subunitchromosome CDS678929 1077 - 0.461467
holB Psyc_1313 possible DNA polymerase III, delta' subunitchromosome CDS1582757 1101 - 0.472298
holC Psyc_0042 possible DNA polymerase III, chi subunitchromosome CDS47861 459 - 0.407407
hrpA Psyc_1049 probable ATP dependent DNA/RNA helicasechromosome CDS1241380 4272 + 0.44897
hupB Psyc_1474 putative DNA-binding protein HU-betachromosome CDS1792826 273 - 0.421245
lig Psyc_0320 probable NAD dependent DNA ligasechromosome CDS396012 2076 + 0.49711
mfd Psyc_1484 transcription-repair coupling factorchromosome CDS1801921 3732 - 0.459807
mutL Psyc_0919 probable DNA mismatch repair enzymechromosome CDS1100965 1752 + 0.430365
mutS Psyc_0247 probable DNA mismatch repair protein MutSchromosome CDS292249 3177 - 0.459553
mutT Psyc_2007 putative (di)nucleoside polyphosphate hydrolase (NUDIX family )chromosome CDS2473141 522 + 0.488506
mutY Psyc_1984 probable A/G-specific adenine glycosylasechromosome CDS2446700 1362 + 0.431718
nth Psyc_0829 endonuclease IIIchromosome CDS996160 696 - 0.446839
parC Psyc_1868 putative DNA topoisomerase IV, subunit Achromosome CDS2297852 2319 + 0.464856
parE Psyc_2094 putative topoisomerase IV, subunit Bchromosome CDS2576187 1887 - 0.463699
phrB Psyc_0430 probable deoxyribodipyrimidine photolyasechromosome CDS538822 1626 - 0.439114
polA Psyc_0378 putative DNA polymerase Ichromosome CDS469527 2871 - 0.447928
ppkA Psyc_1539 putative Protein kinase:Serine/Threonine protein kinasechromosome CDS1883793 993 - 0.411883
priA Psyc_1727 probable primosomal protein N', helicasechromosome CDS2127527 2370 + 0.457806
radC Psyc_1834 probable DNA repair protein RadCchromosome CDS2252545 684 + 0.46345
recA Psyc_1732 recombinase Achromosome CDS2136062 1059 + 0.448536
recB Psyc_1127 possible exodeoxyribonuclease V, beta chainchromosome CDS1342783 4488 - 0.433378
recC Psyc_1128 possible exoribodeoxynuclease V, gamma subunitchromosome CDS1347343 4539 - 0.451201
recD Psyc_1126 probable exonuclease V, alpha subunitchromosome CDS1340502 2205 - 0.418141
recF Psyc_0003 possible RecF proteinchromosome CDS3463 1215 + 0.428807
recJ Psyc_0733 probable single-stranded DNA-specific exonucleasechromosome CDS873984 1827 + 0.476738
recN Psyc_0058 possible DNA repair proteinchromosome CDS64062 1680 - 0.479167
recO Psyc_0335 probable DNA repair proteinchromosome CDS414720 765 + 0.402614
recR Psyc_0794 recombination protein RecRchromosome CDS949693 594 + 0.50505
rhlB Psyc_0943 putative ATP-dependent RNA helicasechromosome CDS1128808 1191 + 0.438287
rnhA bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunitchromosome CDS1000960 1584 - 0.457702
ruvA Psyc_0709 putative Holliday junction DNA helicase RuvAchromosome CDS843168 624 + 0.447115
ruvB Psyc_0710 Holliday junction DNA helicase RuvBchromosome CDS843964 996 + 0.48996
ruvC Psyc_0699 putative crossover junction endodeoxyribonucleasechromosome CDS830680 585 - 0.45641
sbcC Psyc_1063 possible exonuclease SbcCD, C subunitchromosome CDS1267100 3924 - 0.437309
sbcD Psyc_1064 probable exonuclease SbcCD, D subunitchromosome CDS1271096 1587 - 0.446125
ssb Psyc_1683 putative single-strand binding proteinchromosome CDS2082784 642 - 0.482866
tatD Psyc_0890 probable Mg-dependent deoxyribonuclease, TatD familychromosome CDS1064656 810 + 0.428395
topA Psyc_1660 putative DNA topoisomerase Ichromosome CDS2055885 2679 - 0.450168
ung Psyc_1497 putative uracil-DNA glycosylasechromosome CDS1816733 744 - 0.422043
uvrA Psyc_1685 excinuclease ABC, A subunitchromosome CDS2085665 2907 + 0.471964
uvrB Psyc_0744 putative excinuclease ABC, B subunitchromosome CDS887460 2112 + 0.460227
uvrC Psyc_2013 probable excinuclease ABC, subunit Cchromosome CDS2479357 1845 - 0.469377
uvrD Psyc_0583 putative ATP-dependent DNA helicase, UvrD/REP familychromosome CDS692360 2034 - 0.448869
xerC Psyc_0201 probable site specific recombinasechromosome CDS240236 1038 + 0.484586
xerD Psyc_0052 probable phage integrasechromosome CDS59255 939 - 0.482428
xthA Psyc_1199 putative exodeoxyribonuclease IIIchromosome CDS1439948 825 - 0.426667