Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Pseudomonas fluorescens Pf-5, Pf-5

>PFL_3793 hypothetical protein
MPDIKVQCCRCKNKHMESERLKVPSKKYGSGVSDMICPRCRCTTYYRLQA
D
>PFL_4978 hypothetical protein
MDIEQGIETGELEIAGLDVECLVFDQHDVETAVRNLVLFPQFNEYFRDAF
DLINTATSFWLEGESYASCAVTVTRATYRLRDVIYEHASYEAASSLPSVI
RRLLELRHPVTDSQLVATFALILGTQAVETLANWLFDIELATYDIDADLI
EQLRHDSPRQYLALAEKERDRRSGNEIRAREEFATLLGEANQALLMANLY
RQVEQIDVEKNGFNPSSLMHQVLDNAFSEKASRRGREAGKGNRNPSSKIQ
LDAMQRRAKIKAAAEQIINGRMIEKRRLTDAELTKLLFKQGIHGTEKTIR
EHLTALGLRPLK
>PFL_1976 site-specific recombinase, phage integrase family
MGSITVRKRKDGSAAYTAQIRIMQKGVTVYQESQTFDRKTTAQAWIRKRE
AELHEPGAIERANRSGVSVKEMIDQYLKQYEKLRPLGKTKRATLNAIKES
WLGDVTDAELTSQKLVEYAVWRMETFGIQAQTVGNDLAHLGAVLSVARPA
WGYDVDPHAMSDARSVLRKMGAVSRSRERNRRPTLDELDRILTYFEQMRD
RRRQEIDMLRVIVFALFSTRRQEEITRIRWDLLNESEQSALVTDMKNPGQ
KYGNDVWCHMPDEAWRVLQSMPKVADEVFPYNSRSVSASFTRACNFLEIE
DLHFHDLRHDGVSRLFEMGWDIPKVASVSGHRDWNSMRRYTHLRGNGDPY
AGWQWIERVISGPVIEAQVRVKRRAAGRAP
>PFL_4977 site-specific recombinase, phage integrase family
MKRADIKRRPLADTTLTGLEPEAKEYRELDGNGLYFRVKPDGGKSWQLRY
KRPAGNWAWMGLGGYPEVSGALAREKAAELRKTISSGIDPLEQKRSAKAA
IDAAKTRTFRAAADAWLKAKEEKGLAPSTLNKIRTYLDKDILPALGDKPL
DEITRTDCAELQASIEARDAHNVAEKCRTWINQIFGRAIGLGLTENDPGS
RLRDIAAQAPKTQQHPHLLEPELGEFLTALKNTPSRLTARTAAWLCIWTA
SRPGMVRLAEWKEFDLDKATWTTPAAKMKMRRDFVCPLPHQAIAALKELH
CLTGRSRWLFPGVGAKNPTISENTINKVFATIGYKGRLVGHGTRHTASTL
LREHGWPKEHVEAQLAHKEEGISGVYNKAQYLEQRITMMQWYADHLDALE
QGKVIQGQFGKAL
>PFL_1803 hydrolase, TatD family
MLVDSHCHLDRLDLAAHDGSLDAALAAARQRGVGHFLCIGVSADNAADVK
ALADRYDDVDCSVGVHPLDVQPGAAPALDWLLDELNHPRVVAIGETGLDY
HYEPEAAELQQESFRLHLQAAQQTGKPVVVHTRGARADTLALLREAALPN
AGVLHCFTEDWEMAKAALDLGFYISLSGIVTFRNADALRDVARQVPADRL
LVETDSPYLAPIPYRGKPNLPQYVREVAEFLAMLRGESYEAFAQQTTANF
KRLFPLARVKG
>PFL_4979 conserved domain protein
MCAIPRRDGQGAPRRCERLTLRVEGRAMTQRTSNASKRPSFADVKSAALK
DIDRVLAHWLPNGKRVDGGKEYTAPNPTRTDKRTGSLKVNLSKGTWADFA
TGDKGGDLIDLVRYLDGGTDVEACNKLADLLSVSAGTAQAKPTPPKSKSP
EWIAIQPIPAEAMSKCPAKHRQHGAPSKVWIYRDAQGQPVMALYRFDLGP
DEDGKPRKVFAPLTWCKRSDGQTTQWRWQGLPEPRPLLRLDELAQRIDAP
VVLCEGEKAADAATELMPEYVATCWPNGSNSWHKADLLPLKGRSVLLWPD
NDASGKACMDAIKPKLLELGAESVQRVSLEVFKRKPTTKDGKPSFAKGGK
WLEGDDAADALTKGWTAGHVAELVRSGGFFMNTADKKAEEPIKTKTATKR
PAKSRNDLMPSGFRLTPEGVFYAGDDGEARPVCSPLEIIARTRDEKGHNW
GLLVEFDDPDGAKKRWNIPARTMTGDFGKDVLGPLVDMGLRLAGSRSGRN
ARNDLQSYLGGFDSAQRARLVTRLGWHGNAFLLPEQQIGSHEEHLHFYEA
GAQLPPISEAGSLEQWQQQIGALCVGNHRLAFVVSVAFAGPLLNLLGHES
GGFHFYGDSSGGKTTHLQVAASVYGGPRLVRSWRSTDNALESIAAAHSDG
LLVLDEIGMCDARIIGETVYMLGNGTGKARANDRGQAGRQVQEWRLLFLS
TGEKTLAQHMAEANKELKAGMEVRMLAVPADASKGLGMFDVLNGFEDAAA
LSDALKARVAKFYGTPLTAFLKALSEPGEMLRWSVIVRRTLDQFITQNLP
ATASGQAQRAALRFGLAAAAGELATAFGVTGWPDGTATTAARVCLHGWLA
ERGGAGNLEGEAIMARLRQVIERFGESRFTRWESTAAKIDEHGPRTIDRL
GFRKTMEHGMGDTMHTTITYYVLPEAWRSEVFKGLNLTAVNRELIQRGVL
QPAKDGKASCSVRLPGMGVQRCYVVLSEPGNEVALAETEAA
>PFL_1046 ATP-dependent RNA helicase RhlB
MLKALKKIFGKSEAEPLAPSPSAPSPSSSSRHDGRQPERSAPATAAKKEP
VNTPATPSAPKAPRQEKPKAEQPKAEQPRRPRAPKPPVSTWKLEDFVVEP
QEGKTRFHDFKLAPELMHAIQDLGFPYCTPIQAQVLGYTLAGKDAIGRAQ
TGTGKTAAFLVSIITQLLQTPPPKERYMGEPRALIIAPTRELVVQIAKDA
AALTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDFNQRGD
VHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTE
DVMNLAKQWTTDPAIVEIEAENVASANVEQHIYAVAGADKYKLLYNLVTD
NGWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFR
EGKIRVLVATDVAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGAD
GVSISFAGEDDSYQLPSIEALLGRKISCEMPPAELLRPVERKRPQA
>PFL_4304 competence protein comEA
MRNSFFTSLIFAFLASFALVTQAAPGPKTQPGSAQVAEQAPIQASKVNLN
TADEAVLQRELFGVGAAKAKAIVAYREENGPFASVDELLEVKGIGRAILE
RNLDKLEVN
>PFL_0515 lipopolysaccharide core biosynthesis protein, putative
MASWNLDPAYQALAEDFGSLEAVFALQGEHLTRDPLSEVIRVERGGVNYY
VKRYTGAGKNLRRYLGKPRVKFEWQNLKRFAKWGIPTADVVAWGLERRCL
AYSRGAMITRELPRTEDLSVLAERNDPRLQDRRWVDGVSRQLAAYTRVMH
DHRFTHNDLKWRNLLVDDQDRLYLIDCPNGDFWRGFWLKYRITKDLACLD
KVAKYHLSATQRLRFYLQYRQRDHLSAADKERIRHVVRFFEGRE
>PFL_3698 conserved hypothetical protein
MRWVCILFPQLALDAVLRQRAEPEAPLALLSGTPQRRVIQAVNAAARELG
LRPGQSLTAAQALTKAFSSAEYDPRQIEHWQQFLAAWAYGFSSQVSVAYP
RTLVLEIESSLGLFGPWPQLEARLRRELQALGFRHRIVAAPNPAAARVLA
NAYDGLAVADCEALAQALGAMPIERLGLAPEQATALSRMGVRSFQQLREL
PRPSLARRFDGSLLKHLDTLLGERPLGLAFYQPPDRFDLRIELNFDVQSH
QALLFPLRRLTADLAAFLCGRDSGVQRFALHLEHAEGADTLIPVGLLSAE
RDPAMLFELARGRLEQIQVPAPVRNLRLVAEDLPLFVPRHSELFDERPQQ
NLPWEQLRERLRARLGDDAVQGLGHRADHRPERSWQAQTDSRPCPATPGL
RRPGWLFTEPQVLGEGSVRILMGPERIESGWWDGADVRRDYYLIETAAGQ
QGWAYRQVGEPGPLLLQGWFA
>PFL_3198 conserved hypothetical protein
MSYRIAVRALCEFSAKAGDLDLRFTPSPTALEGIAGHRTVASRRNPGYQS
EVALEGQYAELLVKGRADGYDPAQNLLEEIKTYRGDLERMPDNHRQLHWA
QAKVYGWLLCQSLQLPSIRVSLVYFDVLSEGETALVQEHSAEALEEFFNR
QCALFLHWAQQQMHHRATRDQATRDLRFPHAEFRRGQRALAESVYKAVST
GRCLLAQAPTGIGKTLGTIFPMLKAMAAQQLDTLLFLTAKTPGRQLALDA
ARVLFSGVPGLALRVLELVARDKACEHLDKACHGESCPLAKGFYDRLPAA
RQAASQVPLLDRQALREVALEHQVCPYYLSQEMARWSDLVVADYNYYFDF
SALLFGLAQANQWQVAVLVDEAHNLVERGRGMYSASLDQQQLASVRSSAP
QALKSPLQRLNREWNALHKEQVAEYQAYAQLPAALLKALALCVAALGDYF
NEQPRGLDSGLQGLYFELLQFARVAELFDEQQFIFDISKRALGAKRSLSR
LSLRNVVPAALLGPRLAAARSTVLFSATLNPRGYYADLLGLPDNTVWLDV
ESPFDAGQLEVQIVSRISTRYAHRQASLAPIVELMARQFAARPGNYLAFF
SSFDYLQQVAGLLAREHPDIVLWCQSRGMDEASRQDFLQQFRPEGQGIGF
AVLGGAFGEGIDLPGSKLIGAFVATLGLPQLNPLNEQMKQRMAALFGSGY
DYTYLYPGLQKVVQAAGRVIRGQSDRGVLVLIDDRFAEPRVRQLLPSWWA
LDAPPAGG
>PFL_4671 single-strand binding protein, putative
MGTPVVWEGNIGNPPEHKSFPNGNNEPRQLLRLNVMFDNSIPDGSGGYKD
RGGFWANVEWWHPDAERFAQLFSKGMRVVVTGRAIMDTWKDKETGDDVWA
LKVEANRVAILPHRVNQVTMTQSNNTGQRQNAQQNNRPERQQNSAQQPGQ
HTDDLSHYGNGFDDDIPV
>PFL_1113 conserved hypothetical protein
MEIFLQTVLSFPTVLFSFMLCLAVIYWAVVAMGMLEVDLLDFEADSLLDS
AHAGEGLAGLLIKFKLNGVPVTLVLTLLMFFSWFLTYFAELYVLSHLPLG
WLRYPLGLLLAVLALFLAAPISATICRPLRPLFLKMEATSSKSVLGQTAV
VRSGRVTLEHGEAVLEDGGAGLILRVRADEARAFKRGDRVVLLEYLEAQH
AYRVITEDEFRGL
>PFL_3042 site-specific recombinase, phage integrase family
MNPPGHDRAAGLDAPNPLSLYLKRLAPSSQSTLRYVLQDAADRLGYAEQN
LEEIPWHLLQPEHVTALVATLREDGYAPNTSSLYVNALRGVMNEAWRASL
ISQDHLLKMRSVKAISGTRLARGRNLKRGLIHELMAVCASDPRPQGVRDA
ALIALLYGSGMRKSESVNLDLAQVDFSERSLQVLAKGNRQLIKYAPTWAF
DKLQAWLELRRRHLPAGLVDDPFLFNRIRRGGHITRERITKHAIYYIARQ
RGAQVGVRIMPHDFRRSFITRVIEEHDLSLAQKLAHHSNIQTTASYDLRD
DNERRRAIDRFDL
>PFL_5073 conserved hypothetical protein TIGR00252
MLQGSSQHSGRDAESQALRHLQQHGLRLLAQNWLCKRGELDLVMLDGDTV
VFVEVRYRKHTQWGGALGSIDGRKRQKLILAAQLFLQSESRWSSHPCRFD
VVAIDGASGAEARLNWLRNAFDS
>PFL_3878 ATPase, AAA family
MDLFRSAPIAQPLAARLRATNLDEYVGQQHLLARGKPLREALEQGALHSM
IFWGPPGVGKTTLARLLAEVSDAHFETVSAVLAGVKEIRQAVEIAKQQAG
QYGRRTILFVDEVHRFNKSQQDAFLPYVEDGTLIFIGATTENPSFELNNA
LLSRARVYVLKSLDEAALGTLVQRALTEERGLGKRQLSLSDEGFQMLLSA
ADGDGRRMLNLLENASDLAEDGGEISVDLLQSLLGDTRRRFDKGGEAFYD
QISALHKSVRGSNPDGALYWFARMLDGGCDPLYLARRVVRMASEDIGNAD
PRALSLCLAAWDVQERLGSPEGELAVAQAITYLACAPKSNAVYMGFKAAM
RAAAEHGSLEVPIHLRNAPTKLMKQLGYGDEYRYAHDEPDAYAAGEDYFP
EELEPLPLYQPVPRGLELKIGEKLKHLAALDRASPLQRRKP
>PFL_6102 integration host factor, beta subunit, putative
MRKPELAAAIAEKADLTKEQANRVLNAILEEITGALHRKDSVTLVGFGTF
LQRHRGARTGKNPQTGEPVKIKASNTVAFKPGKSLKDSVNP
>PFL_4894 hydrolase, NUDIX family
MSLSSVAAPSIIRIAAALLIGADGQTLLVRKRGTQAFMQPGGKIEAGEQP
VHALARELEEELGLRIDPAQARYLQQFSAPAANEPGHVVEAEVFLVHIHS
PVTPAAEIEEVRWIDPAGDGDLFLAPLTRDLILPFYRKARAGHA
>PFL_5407 ATP-dependent RNA helicase, DEAD box family
MTFATLGLIEPLLRALETLGYQTPTPVQAQAIPAVLGGRDLMAAAQTGTG
KTAGFALPLLQLLTLEGPKVDSNSVRALILVPTRELAEQVHESVRQYAEH
LPLRTYAVYGGVSINPQMMKLRKGVDLLVATPGRLLDLFRQNAVKFSQLQ
TLVLDEADRMLDLGFSEELKSIYAALPKKRQTLLFSATFSDAIRQLAGQM
LNDPLSIEVSPRNVAANTVKQWVVPVDKKRKPELFSHLLRKNRWKQVLVF
AKTRNGVDALVEKLQGQGVNADGIHGDKPQATRQRALDRFKASEIQILVA
TDVAARGLDIEDLPLVVNFDLPIVAEDYIHRIGRTGRAGSTGEAISLVCA
DEVNLLSAIEMLTRQTLKRHEEQDFEPEHRVPETDASGQVVKKPKKPKKP
KTSGGGGKRNLGKWVDSGEVAEAPAVKPVRKVPAFNTGPRKRKP
>PFL_5831 conserved hypothetical protein TIGR00250
MALRLILGFDYGTKQIGVAVGQAITGQARELCTLKAQNGVPDWNQVEALI
KEWKPDAVVVGLPLNMDGSPSDMCVRAEKFARRLNGRFNVPFYTHDERLT
TFEAKGERLARGGQKGSYRDNPVDAIAAALLLQGWLDENAGLLNT
>PFL_3013 DNA-cytosine methyltransferase
MSEDLRFFEFFAGGGMARAGLGNQWQCLFANDMDRIKASTYIQNWGKDHF
DSRDIREVNSEDLERNGDLAWASFPCQDLSVAGNGLGIGSSSAKDFTRSG
ALWPFLDLIDTLRQEERQPPLLVLENVVGLLTLEGGRDFAAICERLGEIG
YRYGAVIIDAKHFLPQSRPRVFIIAVQRNIDIPCKLSRGMATANWHTPTL
LRAYKSLTPILHADWVWWELGDAPILQENALESFIQREGVLWNTPEETKR
IISMMAPAHLARLENAKCAGGVAVGSLYLRMRREGGINKQRAEITFSPLL
GCLRTPRGGASRPRIIVVESGHVRTRLLTICEAARLMGLANTYILPEIYH
HAFKVIGDGVAVPAVRFLAERLLEPLAIAARGQIAIPHEKAFMA
>PFL_1978 conserved hypothetical protein
MLVKRTYTHFGFCCGLGSGAAGFNDSSLQIAQMLGNWRCIGGVDVDPAGL
ADFENFTGVKGTLRDLFTREQYTAFHGAEPPAGWIEATAEDIRRTAGNED
PDAVFISSPCKGASGLLPESMSLTPKYQALNELTLRCVWLMLEAWQHNPV
SLIVFENVPRLASRGRHLLDQIVKLFAHYGYAVNETVHDCGEIAGLAQSR
KRFLLVARHIEKVRAFLYQPQQHRLRGVGEILRRMPLAGDIELAGPMHRV
PALHWKTWVRLAMVEPGKDWRSLNRLSVENGFLRDFLIVPEYRAGYLGVN
RWDDPTGVIAGRNTPTNGNYSVADPRPSSSAEYAQFGVIPWERHCGVVTG
QRSPGQGTFSVADPRPNWKRHSNNYRVVPFANFAGTIIAGGKGVQGGWQS
VADPRVLNRKKGDAYLTGGHYGVVDWNGSAGAVSANARHDNGRWSVADTR
MPAADDRLACVIRSPSNTWNRPFTTLELAALQSMFDPEDMWQPNQDTGAL
EPVGKPFMLHGNNDGAWRERIGNAVPRKAGKAIADVMLSTLMLNEMGETF
TLSSVPVWVRPLAIAFSMPGQQVGGAA
>PFL_2494 conserved hypothetical protein
MQRLARVSESLHQVLGLDYPSSLELLQALAPRLNSRFVCIFLPHYVASYG
LHDFELSMAALKYFTGFGSSEFAVRHFLRQDCQHTLAVMHEWATDSDEHV
RRLASEGSRPRLPWSFRLEQLQADPQLAAPILERLRNDPSLYVRKSVANH
LNDITKEHPQWVLERLEGWPLEQPHSGWIARHALRSLIKQGDRRALALIG
AGARAEVQVCRFQVAPGQLRLGDSLNLSLTLVSTCSHEQRLVVDYAIDYV
KASGATASKVFKLKTFTLQGLAQVELGRSQQIRELTTRRHYPGRHGVRLL
VNGEPLATDHFDLLVP
>PFL_3697 DNA polymerase III, alpha subunit, putative
MSAYAELHCLSNFSFQRGASSAAELFQRAKALGYQALAITDECTLAGIVR
AWQASRDTGLKLIVGSEMQVEDGPRLVLLVEDLAGYQGLCRLITRARRRA
EKGSYRLLREDFAEPLPGLLALWLTGAGEPLAQGRWLQQVFPQRLWLALE
LHCGQDDARHLQQQLALARQLGLPAVACGDVHMHVRGRRALQDTMTAIRH
HLPVAEAGQRLFANGERHLRPVEVLQGLYPQALLDESLAIAGRCAFDLGQ
LRYQYPRELVPEGHDAGSWLRVLTQRGIVRRWPTGARAEVLKQIDKELTL
ICDLGYESYFLTVHDIVDFARRQHILCQGRGSAANSVVCFALGITEIDPD
RSTLLFERFLSRERNEPPDIDVDFEHERREEVLQYLFQRYGRHRAALTAV
VSTYHGAGAVRDVAKALGLPPDQVNALADCCGHWSDTPPSVERLQEAGFD
PQSPVLRRVLSLTGQLIGFPRHLSQHPGGFVISEQPLDHLVPVENATMAE
RTVIQWDKDDLDMVGLLKVDILALGMLSAIRRCFDLIHGYRGQRYSLASI
PPEDPATYEMIGRADTIGVFQIESRAQMSMLPRLKPQNFYDLVIEVAIVR
PGPIQGGMVHPYLRRRNRQEPETYPSPELEGVLKRTLGVPLFQEQVMQIA
IVAADYTPGEADQLRRSMAAWKRHGGLEPHRERLRRGMNRNGYSDEFATQ
IFEQIKGFGSYGFPESHAASFALLTYASCWLKCHEPAAFACALINSWPMG
FYSPDQILQDARRHGLQVLAVDVGASDWDCSLEPIPVQPARAGNGPPGQP
ALRLGLRMIKGFREDDARRIERARRQRAFVDIADLGERARLDVRAQELLA
DAGALQALAGDRYRARWEVAGVERQLGLFAGLPSQEEAPVALPRPSVGED
LQADYHSLGTTLGPHPLALLRPQLAARRCRSSRDLLAVEHGRSVSVAGLV
TGRQRPGTASGVTFVTLEDEFGNVNVVVWRDLAERQRRVLVGAQLLKVDG
TLETEGEVRHLIAGRLSDLSPLLDGIHVRSRDFR
>PFL_0526 O-antigen polymerase family protein/toluene tolerance protein
MQPNALHNTANRVFDFICLWILPIGYLLLLCAMFFLPGRSGLHKLYYGLF
SIPTLIALCTRPSELKSLLREPVFIAMLLFCTWAIVSLAWSPPVDSVLGE
IKTPLHTLMLFAGCMLLVRYRGEVLQPLVFCAAIVALIASIFNLYVFVRY
HTPELRMIGAGAFDNPLLSSHVFGFFCVYWLCLSMNCRRYQILWLSVPAL
VIMVAALIATGSRTPLVALTLAALWLSFISWNRRSLMLLGGMLAGGIAVV
ALFSQMLLERGSSSRFDLWRLALEQIANHPWIGHGYNASLSLDPGIGFLL
QEPHNFALGVLYYVGIIGLLPWLFMQAWALFKSWQLRAEPLLILASTWLM
FGIGAGLTEGGGILSRPKEHWFLLWIPLALIAALCISQRARRSPSHTVES
LTQADADKLMANARVIEADGLGPKVLRLDDGSFLKLFRPRRWYTSGGFNP
YSERFVTNSEQLRELGITTPKILGLYRLADGSNAVRYQPLPGQTLRQSLQ
LASSGDERSKLIKRFGAFMANLHEQGVYFRSLHLANVLVLENGEFGLIDL
ADLRVYPSSLRKSLRQRNVRHMQRYAEDCGWLFLEHLDALQAGYAQGTSM
PLATGLLKQLPANDLHQVAR
>PFL_2193 hypothetical protein
MTILSDAEYQWLEIDSTRWLVDDVVVGKVDGSIICCQCKKNQPDFRPWTI
SDLSSEFDKSSLLLAREANAEVHFYSRGTFGLVAKLREHCATQPDQECYR
ESLTVEHTTTDTSLSNTFNAAVSLTTYEFLRRTTFHNTEDFSDLEASLLE
RLSLLSTNAQAAYVALWHHLDQLGSRMASYGSKAASVQHRLTRADLVVVL
TQSGSMLAPHMDESEIRASLNGVSAVGRSWRREIGGKRLQNRVVEDLLSA
IYSRKRSILLTGMPGSGKTCTLLAVQEALELRAKRDSALVPMFIQSREFA
DLATARDREAQGLCEDWVERVARLADKAHVVIVVDSLDVLSISREHTALK
YFLAQIDRLLLIENVTVLTACRDFDRRYDRRLAAMVWDCELACQPLDLDC
EVLPLLQSLGIDTAGVDGPTRALIQNHRELAVFIELAQLEGGFSVVTSQG
LAQRYLDTLVRADTRLGDAAVQAIESVADEMLSTRSLTIPAQRFGGSQSV
LRVLLSHNVLHQALDGRVGFGHQTLLDVLVISSAIRRGMTLNSFIQSLSP
APFVRPSIRSFVAQLAIGDRRVFRAQLRAVLMGGSPFHVRRLVAESLADR
LPHDDDWPLLRDLRRDCSDVFQVIYLQGKALEWGQFWFKYLVPVLREERD
QEALMMLMHQCSVWANEAPSLVFPFWTELLEADWMDRERVASRLGYLLSE
IAPAHANLVGKLVESLLSLPLQEHSCLGQSVARCIDAGVLSDEVLWMFVT
GRVTDDDVLDLHNLGEKLRLQDYEFGDQCKNYLAERLKVSTELLNLAVQS
IEDWSQLRISDIGEWAAGSSGFLRSTSYSVIRTKDDGQHGDADDLLLSAI
EAAVINHASLDSKWWRNNRERLCFNHEGALRYFGILSCKAAPSCNVDLSV
RLLCEKSLDGSEFGYELGCLAKVAFVHFDSKQQSSVMAAVFAITECDDQD
EREILRRQSVQARFVACIPCHMRPPNAQLLLEDVEVREGIFIEAPPIQGW
SGIVSAPFPFSVFLETSNHGVLRLLKYYTGYERSFEEGLIGGESEVASML
REAASRDPDRFLGIMSKSWPDISPVFRDAIMSGAAYCLAYLHGNLKSENS
WAPLVSVDGAALAGVVIKELSNHSEYWRQNRVASNALNACSHVIANIDQV
HRHVDLSAEFLEMQEGASISGDGVSHLEVGLNMARGHIAEALVILVTNLT
KSGVPLPEALLRLLRNFADEENPAVRAVIIRRLPYLQSLDPSVGWDLFDR
CMKGRSSGLWGTAEPCLYYTYYKDFERVSKWLGRLRFEGIGKDLETWGRI
SALAALPDHTRTSELLIDLTAIDEVAAWHGASAVWTNTQNFNRHRSQCIA
GLEYGLSVVGHADAVVQRMNQLFHRGVTGVPSDLVRSYFTVREASSNSTN
SQIYGLDKWLSATAQRDPAEALTVFELYLEYMREKSAYMYDHGGNFTQLL
TRLFAEAEEWEETDGGVMLQRVVSVQDELLSLGVSGVSDWLVAAERP
>PFL_1952 helicase/SNF2 family domain protein
MERGRRYALEKRVRIATAGDSAITASCEGSGGTMYRQTITLRESSKGNLL
LIDAHCTCPVRSNCKHIAAVLLQVEETLAYPAAAQDAELLEKLSAVLDSR
RPAAPPQVLLEDVHPVPRLWLASIEFSAFEPRNGKMQRYIQHRAALSFNY
RGEYASGQKNTDVIIRQEHQSLRIKRQPELEQGWREQLRGLGFKIATRQS
KALPESAGELFEMVNDSAWLTFTLNELPKLRSQGWELQIDEGFGFDLTAV
DDWYASVDEAPGRDWFDLELGIIVNGERLSLLPILLNLMRSHTEILNPER
LAKRRDDELILVNIPNRPNSLHGPLQVALPYGRLKPVLATLGEFYLQEPG
DTTLRLSSADATRLNPLQDLPLLWEGGEHIRTFAQRLRDIRDYSAPAPQG
LNATLRPYQLEGLSWMQSLRQLEVGGILADDMGLGKTLQTLAHILSEKNA
GRLDRPCMVVMPTSLIPNWLDEAAHFTPQLKVLALYGAGRKKHFAQLGDH
DLLLTTYALLPKDIELLAAQPLHVLILDEAQYIKNPSSKAAQAARELNAR
QRLCLSGTPLENHLGELWSLFHFLLPGWLGDAKSFNRDYRVPIEKHASEV
RLQHLNGRIKPFLLRRTKEQVATELPPKTEIIHWVELNEAQRDVYETMRL
AMDKKVRDEITRKGVARSQIIILEALLKLRQVCCDLRLVNDSPPTRGSSS
GKLDSLMEMLEELFEEGRRILLFSQFTSMLSLIEAELKRRNIAYALLTGQ
TRDRRTPVRDFQSGKLQIFLISLKAGGVGLNLTEADTVIHYDPWWNPATE
SQATDRAYRIGQEKPVFVYKLIARGTVEEKIQHLQQEKSDLAAGVLDGRK
AGDWKLQSDDIEALFAPLPDNKGGR
>PFL_3959 protein kinase domain protein
MLTLFMDTLAQLRAGQLAGIKRLDLSCGLTEFPREIFDLADSLEILNLSG
NALSSLPEDLHRLTRLRILFCSDNRFSEVPACLGQCLQLSMIGFKANRIE
RVPAAALPPQLRWLILTDNRIAELPEELGQRPLLQKLMLAGNRLTRLPES
LGQCHRLELLRIAANRLTELPPFLLALPRLTWLAYAGNPLESEADATALA
STPSIPWSELTLEQRLGEGASGVIHQAQWQPAGQPPRAVAVKLYKGEMTS
DGSPLHEMNACISAGLHPNLIRVEGRILDHPQGQNGLVMQLIDKSFANLA
ALPSLDSCSRDIYPDDARFNADVTLGIARGIASVGAHLHAQGITHGDLYG
HNTLWNAQGDCLLGDFGAASFHAQDDTVQSRALQRLEVRAFGILLEELLE
RGDGSLSLEQRQKLAALVQRCCQPEVLARPGFTQVCEELAGL
>PFL_5801 ATP-dependent RNA helicase, DEAD box family
MSFASLGLSEALVGAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTG
KTGGFALPILERLFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFK
LYARDLKFVSACIFGGVGMNPQVQAMARGVDVLVACPGRLLDLAGQGSVD
LSHVEILVLDEADRMLDMGFVHDVKKVLARLPAKRQNLLFSATFSKDITD
LAGKLLHNPERIEVTPPNTTVERIEQRVFRLPASHKRALLAHLITAGAWE
QVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEV
RILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAI
SLVAPDEEKLLKSIERMTKQKIADGDLMGFDASAVEAEKPEVRERPDVRN
PRNPRGPRGDGPNGGGGGGGRKDKGKDKGGKEKPARGERPAREQKPREGT
PAREQRQPTPRADRAPDEFLDDDVDNFGNRADYVSPYQNKNNQGRGRRPG
APAQGAGAGNPPRGGAGGGQGRSGNPRNSNGSTTGTAPAKRSGGPRNGAP
RDSQGRRDEPRNRRPNRDDQPRQEPAVQNPRGNQPKIMHKESKADRFPTP
EQLDQLPSRPRGEKPALLTRNR
>PFL_4692 ultraviolet light resistance protein B, interruption-C
MSDSVFALIDCNSFYASCERVFRPDLARVPIVVLSNNDGCVIARSYDAKP
HVKMGEPYFQIKRKLQQLGIVAFSSNYALYGDMSQRVMSVIESMVPAVEV
YSIDEAFADLSGICGPEALGRQIRAQVMRDTGIPVGVGIARTKTLAKLAN
HTAKRLQTHTGGVVDLCDTFKRDWVLRNTDVAEVWGVGRRMTAHLESIGI
RTAMDLANADPRTLRMKFSVVIEKTARELAGTACLELDDPAPPKQEICCS
RMFGQRLQELPALKEAVATYMMRASEKLRAQGSLCKKIRVSIRTGMFNPE
EAKYANGVVVHLPYPTDDVRLLTREAVDALDRIFRPGFKYSKAEVMLLDL
CQPGDYTDDLFAVSQPADATRVMKVLDQINDRWGRGTLRSASVPAEPAWG
MRREMMSRSYTTRLEQLWTVHCH
>PFL_4984 hypothetical protein
MSFNESVVRKNIAAFLNLIESGLTLVKEEFFLPNEFGSRGFIDILARDKD
GCLVVIEVKISKHSEREAITELFKYLALLKQNMSLKDSEIRLLVISTDWR
ELLTPFSEFHWNTNYNSAGLMAVVDSSGFPLELKPVELLERSTGRKINER
HWLQVYESKSGRDVGAVAYADAIQRRGIKNFVVANFTYEYPDWDVKGYGF
YFAQQEESLEFYKGVLQSFSEELFQEISECTATYKSDEDILNEFASASTD
MVYVPADEKEIGHPEKIKGYLQNESWTIEGIARYGIFKKDIRLTDQEIIN
DLCGFSGGSYTWYAATIKLANKAGLNEVKDRYSKCLYHNDTWRRAIRDYI
EYFETKDSDSVMRLSIFNSENILETVTLMERHGELLYVPNFVLAIEDPVI
GELEIFYGSISVNGQAPKTVENIARKYFQGSLSNAPMQAFFHAISKINND
ILSDLGLFYDLGYTRIVNGDVISKARNPRIRGSQVIFDDFREEDEGFVGW
LVSNESLVRNISRDYSAAIYNPMEI
>PFL_0289 ATP-dependent DNA helicase, RecQ family
MHSTLEQVFGYPQFRLGQEAAVSAVLAGRSAAAIFPTGSGKSLCYQLPAL
LLPHLTLVVSPLLALMQDQLAFLQRHGIAAASIDSAQGRDEANEVMARAR
SGELKILMISVERLKNERFRNFLQQVPISLLVVDEAHCISEWGHNFRPDY
LKLPDYQRQFNIPQALLLTATATPKVIADMQAKFAIAQQDVVTTGFYRPN
LNLLVEPVRGADKRRRLVQWMSDRAGQPSIVYVTLQKTAEQIAEHLSQQG
IAAEAYHAGLPHEQRESIQRRFMEGRSHCIVATIAFGMGIDKSDIRNVVH
FDLPKSIENYSQEIGRAGRDGQPSDCLVLANRDSLNVLENFVYGDTPELS
GIRCVLEELQASAADGQWEFLLGPLADQSNIRQLPLKTLLVQLELRGLIA
PRYAYFAEYRFKLLLETEALLARFEGERRDFVEAVINTSSRARTWATVNF
DALYEQYQAPRNRVVKALDYFQEKGWVELESKQMTEVYSLLQTDFDLAAL
SADLHGYFTRHEGSEIARIHAMLDLFATEQCLGYRLAEYFGDRQAPQRCG
HCSVCHGQVARLPEPPVLPALVDKSFDGLCGHFIHRHQQHTGDVPGAERL
TRFLCGISVPLFTRLKARSIPGFAALEDYPYAAVRAWCEAHLPG
>PFL_2819 prevent-host-death family protein
MGTMERYSKVGMQELDQRLSKIVEAARKKPVSVYRYGAPWVWIVSQDDWQ
GALKEVASYIPPGHSLVLLRPQIDELLDQHRDLLQGLNAEPGMLIAPRTV
MHILLLQLLYSVPSEQQLYEQLSYNLLFRWFVGLDLNQKVWSFSVLSRDI
ATLLNNPRAVQLIQKIIGEVFCGALLQMPEFSLNFALLHTWLARHENTSI
TSN
>PFL_0442 staphylococcal nuclease homologue
MGAFFVGAIWLTAAEAFCPAPKGLLPATVLRVVDGDTLHLKDGRRLRMIG
LNAPELAGKGRPAEPFAEAARQRLRQLVAQSGGRVGLLPGRERQDRYGRV
LAHVYGVTGINFEARLIAEGLAYRIAVLPNVALASCQKAAENHARRAGLG
LWRRSPVLKAQQIHRAGFALFEGRVSRVQRNRGGLWITLQGQVVLRIAPN
VLRRFDRRLLSGLSGRRIEARGWVVDRSRQPGRQSAHPRWMLSVTDPSML
GLI
>PFL_3794 site-specific recombinase, phage integrase family
MRPRKTQNRNLPPRMYVRQRTRKNGKVWVSYYYLDPKGKEVTLGSDLSLA
RLKWAELEAKDKPQDLCLMRAIFDRYERDIIPKKGERTQKDNRAELRQLR
PYFDDAPIDAITPSQIAQYRDARSAKVRANREIATLSHVFNMAREWGLTA
RENPCQGIRKNKETPRDFYANDAVWDAVYKKAVQELKVAMDLAYLSGQRP
ADVLLMRKDDIEGSALGVVQNKTHKKLRIILEVEGKETGLGALVQSILRR
NESHSSPYFILTEEGRRVTTTMLRRRWDDARDEAAKAADADGDMILASRI
RQFQFRDIRPKAASEITNVEDASLLLGHTKGDITERVYRRIGALAKPTK
>PFL_1561 lipoprotein, putative
MARRWHLLIPLLIISLLLGACSRVGLAYRNLDVIIPWNLNDYLDMNSEQK
SWFNQRLQQHLSWHCTTQLPGYLDWLDRLQLMVQNNQVSDQGLQERTREA
KQAIAETARQITPSAVELLQGLNDQQVKEMNSAFAKDLQEHQEQYLKPPL
AQQIEQRSQRMSKRLNAWLGPLSPSQQQRVEQWSSSLGQQNQQWIANRAH
WQAQFSAAVEQRQNSDFPQRIEQLLVHRESLWTPDYRQAYAHTEQAARSL
LVDLMAQSTPAQRQRLLKKIDGVRKDFAELKCLQNARQG
>PFL_1258 MGMT family protein
MTEHSEEPQSPAQIRRTALYLTLAQVPEGRVVSYGQLAEMAGLGRAARWV
GRTLSQLPPDTSLPWHRVLGAGGRLSLPAGSPSGDEQRARLRGEGVSILN
NRVDIQRHGWRPVEHSG
>PFL_4698 conserved hypothetical protein
MQWTQQQLPIIGSKASEIVVKAFAGTGKTTTLVGFAKANPQLRILYLCYN
KSVEIAARGRFPRNVINKTAHGLAYAVFGTQYSHKQTKNLRLTEIARAID
SQDWELVRDVMTTLNNFMASADSEIDRQHYPRFRDKPHLTTAQERFVQQS
ISTARRFWQRAIDVDDSSVLIPHDGYLKLYQLSKPDLSQRFDSVLLDEGQ
DINPVIADIVRLQRIQKILVGDPHQQLYRFRGAEDTLDSDWMAGAEEHYL
TQSWRFGPAIAHVANIILSYKGETRKLQGLGAQTLVKKALPEDLPHRAFI
HRTVIGVIENALQLVRCQPQPKFYWVGGIDSYSLRDLEDLYYFSRDQTAQ
VQNKKLLRDYRDYQQYTEIAEVSQDSEMLRSIKIISAYPDLPSRILELRK
LTTEDELDATITLTTGHKAKGLEWDYVCLYDDFTADPLSPDLDPGRRDDE
LNLIYVAVTRAMKILAINSLVLSIMARYVAANRMPA
>PFL_5457 DNA-3-methyladenine glycosylase, putative
MSILTSAKLPKALPDGFFDRDAELLARELLGKVIRHKVGDLWLSARIIET
EAYYCEEKGSHASLGYTEKRKALFLDGGHIYMYYARGGDSLNFSARGPGN
AVLIKSAYPWVDEVSGPASLAQMLLNNPDASGRPRPAQKLCAGQTLLCKA
LGLKVPVWDAKRFDHEILFVEDVGAAVPHILQTTRLGIPHGRDEHLMYRF
VDAAYAPYCTRNPMRRGQVEGRDYLVLG
>PFL_3160 conserved hypothetical protein
MVMPDHFHWLLALGTGSLSALMRGIKSRSARDINAFLQRTGRVWQKGYHD
CALRREENLLGVSRYIVANPIRAGLVTRVHDYPLWDAIWL
>PFL_3266 hydrolase, NUDIX family
MIERWTTAVLDTDLPGGWAVARGPDGFLYDDNGALFPRHWLKGQDLPLLA
EHGIGHLDGEPVYLLELSARAEVPGCGWKGLRAFMLEGDHTLYKVLGYAA
QIGTWAREHRYCGSCGRPMAQVPGERAMYCQPCDLRSYPRISPSMIVLIT
RGDEILLARSPRFVTGVYSTLAGFAEPGESAEDCLIREVREEVSIEVRNI
QYVGSQCWPFPHSMMLGFHAEYAGGEIIPQEDEIEDAQWFSVHALPPLPA
SRSIARYLIDLYVARRLGHAEPVLPG
>PFL_1549 ATP-dependent RNA helicase SrmB
MHKETRPSRSKPVPYAAVFLHIFEVAPVFSQFALHERLLKAVAELKFVEP
TPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILNRLIGPAKIRVSIK
TLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRKVPD
ILIGTPGRMLEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDEC
PNRQQTMLFSATTGGSGLREMVAKVLNNPEHLQLNSVSQLNETTRQQIIT
ADHNQHKEQIVNWLLANETYQKAIVFTNTRAMADRIYGRLVAQDYKAFVL
HGEKDQKDRKLAIDRLKQGGVKILVATDVAARGLDVDGLDLVINFDMPRS
GDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIERYLKQSFERRTIKE
VKGTYSGPKKVKASGKAVGVKKKKTDAKGDKKKAVAKAPTKRKTANRPKS
DSLVSQDGLAPLKRRKPQAPAAE
>PFL_4251 ATP-dependent RNA helicase, DEAD box family
MTQEIGGFAALELHPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQA
QTGTGKTAAFALPILHRIDPSKREPQALILAPTRELALQVATAFETYAKQ
MPGVTVVAVYGGAPMGPQLKAIRNGAQIVVATPGRLCDHLRRDEKVLATV
NHLVLDEADEMLKLGFMDDLEVIFKAMPETRQTVLFSATLPQSIRAIAER
HLKDPKHVKIQSKTQTVTAIEQAHLLVHADQKTSAVLSLLEVEDFDALIM
FVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVV
ATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGREGRALLLVT
PRERRMLQVIERVTGQKVAEVRLPDAQAVLDARIKKLTNSLSPLVADAEA
THGDLLDRLTADIGCSPRALAAALLRKATNGQALNLAAIEKERPLVPNSA
PRGDRPERSGDRPDRGDRERRAPMPLGEGRARCRTALGARDGIAAKNLLG
AILNEGGLAREAIGRIQVRDSFSLVELPEDGLDRLLTKLKDTRVAGKQLK
LRRYRED
>PFL_3818 hypothetical protein
MLLNTLLLSGCGTYMTRGNALDFRDDRYYRSVKTNAQVLTGYDMGYARMI
TGGCWVMVVCPILMIASLPLDAALDTVLLPYDALQPERPKRNMHVDMKEI
PEQDLQALPISAEVQDPTAHTPPITPQAD
>PFL_3890 hydrolase, NUDIX family
MEWQPHITVATIVEDQGRFLFVEEYQGEQAVLNQPAGHLDANESLLQAAV
RETLEETGWDVELTGVVGIYLYTAPSNGVTYQRVCFAAKPLRHHPDYQLD
DGIIGPRWLSREQLLEQRANWRSELILQCLDDYLDGQLHSLALIRPML
>PFL_3655 cobalamin biosynthesis protein CobW
MLQGHCMGVDDAGGKAQQSPVRRLASPQPGDLPRSQILTTTGRGDPVAKS
PRARRCGSRPVCPPPFAKGHPMKTLAKLPVTIVTGFLGSGKTTLLRHMLD
NAQGRRIAVIVNEFGELGIDGEILKQCAIGCTEEEASGRVYELANGCLCC
TVQEEFFPVMRELVARRGDLDHILIETSGLALPKPLVQAFQWPEIRSACT
VDAVITVVDSPAVAAGTFAAFPDQVDAQRKLDPNLDHESPLHELFADQLS
SADLVILNKTDLISPEDLAKVRLEVAEELPPAVKVIEASSGRLPLDVLLG
LGAGSEEHIDGRHSHHDHHHDGDDDHDDHDHDAFDSISIELPQADESLLL
DALTQLVVKHGILRVKGFAAIPNKPMRLLIQGVGTRFDKHFDRKWGADEA
RTTRLVLIGQELDAAQLEAQLRAALSV
>PFL_2730 nuclease SbcCD, D subunit
MRLFHTSDWHLGQNLHGQERDFEHACFLEWLLRQLKHEQPDVLLIAGDIF
DTVNPPVSAQERLYDFIVSAHEQQPALTVVMIAGNHDSGSRIELPAPLMR
RLRTHALGRVLWLDDGQLDAERLLLPLPDASGQVAAWCLALPFLRPAEVT
GRQLGDDYLKGIAQVHEWLIAAANAKRQPGQALVAVSHAHMAGGSVSEDS
ERSLIIGNAEALPASLFGPDISYVALGHLHKPQKVNGEERIRYSGSPIPL
SFSEIGYQHQILDVRLDGETLVSVEPRLIPRAVNLQRLGPAPLGELLTQL
GELPDIDLLAEEQRQPWLEVRVRLDEPQPDLRQQVESALQGKAVRLVRIA
AEYAGKGAGDGEEASAELIELDQLTPEELFRRAWRDAYANEVDEATLKDF
ALLLQDVQQEGEQP
>PFL_4674 helicase, SNF2 family
MMNRQPVLIEKAVFDGYDFGIQMPFIEGANKVLLRRGGFFIRRGEHPLNR
HWRIPKNKLNSELDLVFHELIELGQDRFTESWQSFQEKLEQAQASPQRDA
FIWGMQLRIAPLAGRGVLLSGDYHPGVVAVARRMRGVFLGKSTSWRIDAS
AELVRSNLILELGLAEEQIGLLDIVQELLDDGSVAPAEGIPRISLGGPPQ
EAMEATSTEEVSNEIYLAAVSPIERTEYSAQAISKALEGYSLLDHQPAGI
AHLLQRTSALLADDMGLGKTRQAVIAAHIRAAGLPILVVTLSSLLINWER
EIHVVYPAATVAQQKFAPEAQWMIINYERLGDYVTVAERYAVMVIDEAHR
LKEPTALWTRHGFDIAAKIPNRYLLTGTPILNRETELHTLLRLSGHSIGQ
LPLKDFCEQFSGSPEFRQNLRAQLGDWMLRRRKDVLPGLKSKQRQLLAIA
MSDEERRQYDVIRLEDKPIFARLGALRFYLEQLKIRIAMDLLSELDPDDK
VILFCEFKPTVAALKALCEEAGIGHVTLVGSDSPAKRQKAIDRFQQDPDC
RVFICTTSAAGTGNNLTAANYVFFLGLPWTPGQQDQAEDRAYRNGQLRMV
IVKIPLIEASIDQQLWELLLAKRQVSLELIEPEGQQEALAKTLLAASMGH
>PFL_5772 ATP-independent RNA helicase DbpA
MTTIATAFNTLPLSPAMLANLDSLGYAQMTPIQAQSLPVILKGMDLIAQA
KTGSGKTAAFGIGLLNPINPRYFGCQALVICPTRELADQVAKEVRRLARA
EDNIKVLTLCGGVSFGPQIASLEHGAHIIVGTPGRIQQHLRKGSLVLDGL
NTLVLDEADRMLDMGFYDAIEDIIEKTPSRRQTLLFSATYPVGIKQLASK
FMRDPQTVKAEAFHDDTQIEQRFYEISPEERMSAVTKVLHHFRPASCVAF
CFTKQQVQETVDHLTAKGISAVGLHGDLEQRDRDQVLAMFANRSTSVLVA
TDVAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGEKGIAVSLVAP
SEAHRAQAIEQLQKAPLNWDQVDNLKSQGGAPLQPPMSTLCIAGGRKDKV
RPGDILGALTGDAGIPGAQVGKIAIFDFQSYVAVERTVVMQALQRLNNGK
IKGRSLRVRVL
>PFL_2506 hydrolase, NUDIX family
MRANKACPVVLRHSTELEILAFRHPLAGLQLVKGTVEAGESTATAAVREL
AEEAGVQAGESGFLGLWHSGFCGQVWAFHECRVPAPLPESWSHFTADDGG
HRFEFFWQPLASLPSEQWHPLFQGALGLLRQRLLGEGAEA
>PFL_5860 methyltransferase, putative
MARPARPSKKPVHNQHNGVGQLRIIGGEWRSRKLSFPDLPGLRPTPDRVR
ETLFNWLAPYVAGAKVIDLFAGSGAVFLEALSRGAATGLALDSSSVAISS
LREHLGTLRCTVGQAQTADALRYLETQPATPFDLAFLDPPFNQNLLPAAC
ALLEERGWLADDAWIYTESETAPSTLGLPGSWRLHREQKSGQVYYSLWQR
MADNVA
>PFL_2022 ultraviolet light resistance protein B, interruption-C
MSKHNEPVFALIDCNSFYASCERVFRPDLAKVPIVVLSNNDGCVIARSYD
AKSFVKMGEPYFQIKHKLRQHGIVAFSSNYALYGDMSERVISLIESMVPA
VEVYSIDEAFADLTGINSLEQFGRQIRAQVLRCTGIPVGVGIAPTKTLAK
LANHTAKRLQAHTGGVVDITDQVKRDWVLRNTDVAEVWGIGRRMKAHLDG
MGIKSAMDLAKADPWTLRKNFSVVIEKTARELAGTPCLELDEPDPPKQEI
CCSRMFGKRLTELAPIKEAVATYMMRASEKLRAQNSLCKKIRVSIRTGMF
NPEEAKYANGVLVELPYPTNDVRLMTKMAVEALDRVFRPGFKYSKAEVLL
LNLCQPSEYTGDLFALAQPSETDKVMKVLDQINSRWGRGTLRAASVPTNP
DWGMRREMMSQSYTTKLDQLWKVSCN
>PFL_3234 conserved hypothetical protein
MLKWLLSIPLVARFMNTKPEALDFIQTTRFDTAAVEQFANRHGLAKPDIR
QALRHTATFVNSYFIAKG
>PFL_4163 protein kinase
MIRFCPNCQTERPLAEIFCEGQVDNRACGWELSAEAIHPEGWRPQPVITL
EALEPQPPVAADSGSPLLCGNGHAMADGDLMCLVCGADPLAPEQQPPAAP
PAADSETVIEGWRLLRQISSGGVRERFIAEHRETAHQAVLTLYQAGAEPD
PSVYEALKRLPREHVPEIILTGRWDERAFEVAEELTGGTLADLGIVVSDR
AAVQHIVRELGQALHAFSEAGLRHRDLRPATLLVRSREPLDLVISGFGSA
RLSEFDLDIVSPLETSRYMAPEAIAGGVAAASDWWSLGMILLEQLTQGEC
FAGINANAYLIHILANGVLLPDDLDPRLELLLRGLLARDRHQRWQWPQVQ
AWLQGESPSVPASVASEEDAEEGASVALGSRRFRRPGPFALAAAEVEHWP
QALDHLLRGVIVTWAEQAGLPARQLAGLRQVAQHEGLDDDTRLMLALKLL
NPEMPLIQRGEIVTPGWLLEHPLDGYRLISGPAPDLLERLETEHWLSRLK
LRTEQVRQRAQHQAIELDEEQLRIYLLSSSRARLAAQWEERQRLLPDSEH
NGILSLADRRSISEEDLIVLLSAAIGQFRSVDAILEEAATLAREAVVLSF
DAASARALLGLPRPALYREVDERISGFARCGVPSVDEWAEQFRLERRMPL
ARALVLLAIGAEQWLEPQKQHYVSQILDFFEKKVASVVLRGPLVRMSIGK
TTARVDLNELHSERSPAPALLDHLVARNAQPISLDPACFAENPQLDARLN
SLYRQSSLYKRDTGIDGLYLGFPFLLTRDARGTTRTRIAPLLLWPVKLLL
EVGSRGKVALVFDSEREEVRLNPGLDTLLGIDAAKLWRKAADELLGRSAL
KAADVMDAFGMLATASSRVLGSLPPPSTEVQPYQDQLACAAVLFHVAFMG
QAIGEDLRQLKALPPGGTGLETALRLNPAEPDSGDSAATALAPELQRFFT
VASDPSQEAAVLQARQAPGLLVEGPPGTGKSQTIVNMVADAIGRQRSLLI
VCQKHAALEVVHKRLVAEGLGNRVVMLNDINRDREPVIRSVREQLEALFK
DDAVQQPWLHQRERLAARIEALEGELDRFHQSLHRIDEHCGLSYRQLIGE
LIGLEQGPAALDVPVLRQHLAALDIASLTRLEEACAPLIRLWLPARYEHS
ALAQLQPFPTDAATVQAFNQGFERLLSCEEQRLETLQAHPADFEVDDPAP
YRAWLDQHLHSLLGLDDERRQRLARWLPLFRGSNGQAAEGDGLIQALQAL
AQQLEQCDATAYQADLAPGLSALPAAQLRTLQQRARAVIQGRSWLARLNP
LRLIRQRQLLAFLAEQGAAAQPQRLPELLAAALLESQWRPLRAQLQHLHQ
QLSLAQIASDCGPGLLPQVRQDLGQLQEMRALAMTLAQAPRVEQLDAVVL
TGERRSLDSLLAGYDAAFIRHSVRQDSLNALQRLDQWLQPELLGQLRQRV
EHNQGNQSALNRLRDALPTLSAYQAFRARAGQLSPADLELLVVLRDYQDA
LDAIPAEQLEAVVRHMLNREARLGWKRQIEQRQPELMLEHSETAAKIASL
GEADTQMRNLNRQLLSEGIELSRLGTRKQWEDVTRLTGRRSRRLREFMEM
GAGLGLMSLRPVWLMNPDVASRVLPLKPGLFDTVIYDEASQMPVEFALPT
LYRGRVTVVSGDEKQMPPTAFFSSRVESDEAELFDGDQPDADADEEQREA
FEDTWNRREIKDCPDLLQLARSSLPSTTLQIHYRSAYRELIGFSNASFYG
NRLSIPVRHPQANILAIKPLELIRVDGVYQQQVNPDEAERVVDYLAELWQ
APYAERPSVGVVTFNRKQADLIEERLELRAEQDPAFRAAYSQERERSEDG
EDMSVFVKNVENVQGDERDIIVFSSTFGRNSQGSFRRNFGVLGQTGGERR
LNVAVTRARRKVVMITSMPIADISDMLTTQRPPASPRDYLQGYLEYARAL
SAGEFASGHSLLGRLVTERQDAKVQHNAHSDGFTQAVAAYIRTLGWSPVS
ANEGDAFGLDFAIEHPDTGLYALGIECDTPRHGLLARARSREIWRPSVLR
RAIPHLHRVSSQAWYHDPQSERARLQAAIEQALQPLAGADSVTQPPALAD
TEQTP
>PFL_5128 conserved hypothetical protein
MLETDHYQCPYCGEQAEAVLDLSGGDQTYIEDCPVCCRPIVFTLQTDGRE
WMLDVHSEND
>PFL_2661 DNA-3-methyladenine glycosylase
MPTCPATRFLAALDADWAALIAAVGPCLHQPRPEREPYQALVRAVAYQQL
HARAGDAILGRLRALFPGQDFPTPGQLAAASLESLRGCGFSARKVATLQG
IAQATLDGRVPDAASARGLDDEQLIERLIQLPGIGRWTVEMLLIYSLERE
DILPVDDFGVREGYRRLKDLEKQPSPRQLRQIGQAWSPWRTTAAWYLWRV
PTA
>PFL_0857 hydrolase, TatD family
MELIDSHTHLDFADFDADRGALLADSRALGVSRMVVLGVYQANWQRLWDL
VQSDSQLYAAFGLHPVYLDDHRPEHLQQLGDWLTRLAGHPQVCAVGEIGL
DYFLAHLDRERQQALFEAQLQLAADFQLPALLHVRRSHAAVIASLKRFKL
KRGGIIHAFAGSREEAREYLKLGFKLGLGGAATWPQALRLRKVIAELPLH
ALVLETDSPDMAPAMFPGQRNSPQHLPAICAALAQIIGITPEQLASASTR
NACELFGWPSAGL
>PFL_0783 pesticin domain protein
MSRYAIDFSFIAALEGAAITRGYVPDPDKSKSGVTVGTGFDLGQRNVEDL
QALNLPADLIRRLTPYLGLKGLKAKAFLDGQPLNISSDEALLVDEAFKAP
FVDLLAANYTQASGVDFAQLPAPMQTVIASVAFQYGNLASRTPNFWAQVV
ARDWKSALANLRNFGDSYGTRRRKEADLLGSQLTS
>PFL_2699 IS66 family transposase protein, truncation
MQSQRRSYSKSFKAQVGQECAQPGASIASVAQKRSMRLAVPS
>PFL_1085 hydrolase, NUDIX family
MLDELLHRVSHYTPRTLETDRRFPEAAVLVPITRSEEPELVLTLRASGLS
THGGEVAFPGGRRDPEDPDLIFTALREAKEEIGLPPGLVEVIGPLSPLIS
LHGIKVTPYVGVIPDYVEYQANDAEIAAVFSVPLEFFRQDPREHTHRIDY
QGRSWYVPSYRFGEYKIWGLTAIMIVELVNLLYDAGISLHRPPKNYIDT
>PFL_4690 conserved hypothetical protein
MHMNALNQPLATLPLNINLTDFIDEFGDELLESLNRSNPPVYTGVAHEQR
QAVMDNLKRKPFAAQADVVQASAALLLDRNEQAAIINAEMGTGKTMMAIA
VAAIMHSAGYRRTLVISPPHLVYKWRREILETIPDARVWVLNGPDTLIKL
LKLRDQLGLTYDGRQEFFILGRVRMRMGFHWRLACSKRRASGGQQLAACP
DCGRVLEDLEGNLITVDEFERGDRRRNCNACNAALWTLMRPGKADGGDRR
STILKSMCRIPTIGPVRAERLLNDFGEDFLASMLVDNVSEFINLMDTKGN
FIFSDRQAKRMERAMANIEFGFGEGGYQPTEFIKRYLPDGFFDLLVVDEG
HEYKNSGSAQGQAMGVLAAKARKTVLLTGTLMGGYADDLFYLLFRILTRQ
MIEDGYRPNARGSMAPAAMAFMRDHGVLKDIYTERDGDSHKTAKGKKFSV
RTVKAPGFGPKGIHRFVLPFTVFLKLKDIGGNILPTYNEEFIDVPMAPGQ
ASAYQSLASKLTAELRQALARRDTTLLGVVLNVLLAWPDCCFRSEIVKHP
RTRGTLAFVPAIFNEEQLMPKEQALLSLCIEEKAKGRKVLAYTVYSGTRD
TTCRLKKVLEQAGLKVAVLRASVDTSRREDWILDQVDRGIDVLITNPELV
KTGLDLLDFPTIVFLQTGYNVYTLQQAARRSWRIGQKHPVRVIFLGYAGS
SQITCLQLMAKKIAVAQSTSGDVPESGLDSLNQDGDSVEMALARQLIAA
>PFL_5412 exonuclease
MERIAVIDFETTGISPSSSCRATEIAVVILEQGRIVERYQSLMNAGVRVP
AFIEQLTGISNAMLRSAPPAEQVMNEVNEFVGITPLLAHNAAFDQKFWDF
ELGRIKRTRLQNFACSLLLARRLMPAAPNHKLGTLTSFAGLPHTGQAHRA
MADAEMAANLVAHLAGELRHKHGLRELSHDFLCKLQKVPAAKVPEHLKRH
RGF
>PFL_2463 hydrolase, NUDIX family
MSSTPDTQCLLETPYFKVVRENGYFIIKEAQAVNGVVAVPTLADGRLMLV
NLRRRAIGGQSIEFPRGAIDAGESACDAAARELLEETGWQASEVRQLGLL
HSNTSLIASAVAVCQVQIAEQQAAATDGEVDHVLWASRQELLAMIAAGQI
TDGHTLSAAMMLLASESA
>PFL_3396 cointegrate resolution protein S
MSELDRYLQAATRDNTRRSYRAAIEHFEVQWGGFLPATAESVARYLAAYA
GELSINTLRLRLSALAQWHSSQGFADPTKAPVVRQVFKGIRALHPVQEKQ
AQPLELQHLEQVVAWLDEEVASAAAEQRQGDLLRARRDRALILLGFWRGF
RSDELCRLQIEHVQAVAGSGISLYLPRSKSDRDNLGRTFHTPALLRLCPV
QAYIEWINSAALVRGPVFRGINRWGRLSEQGLHANSVIALLRQALERAGI
AGEHYTSHSLRRGFATWAHRSGWDLKSLMSYVGWKDMQSAMRYVEANPFM
GMARIGEKPVQQ
>PFL_4752 site-specific recombinase, phage integrase family
MTPVALLQEYLMDHVLRDASIKIYRSAMKALTKNFGKEVDITTLDRRKIL
AWRNNVVEGGLSRRSWNTYSNHLRTIWTYALEYEIIPSSLTNPFKKSTLI
APKRPSKIISGDGIRQARHWLQSLVDQEKSSGTRSPITPAWFWLATFEMF
YYTGIRLNALLCIRVQDVDWDNRLVYVNADTEKTHREFCVPIMKGLEPHI
QKLLNAASSQGFSGQDQLFNVNRFSIHYRSKIMNIDQVEGMYKKLTSAFG
IRMTPHRFRHTLATDLMRQPERNIHLTKTLLNHSNIATTMSYIEADYEHM
RAVLDERSWHQGAIRLERREDVIPPQGLEPKPEPLPEQLPALAKPPERLE
ECPAATAEDSPTQHAATASELLAALPRQKRPEKYPLEQVSKPCTGLSHEL
SWDGPGTLWADLGIPPCQSMEDSLEPAALMDLLPDRSAIGSFRWN
>PFL_2698 IS66 family transposase protein
MDMRAGTETALARVVAVFGAAQPHCAYLFANRRTNRMKVLVHDGFGIWPA
ARRLNQGKFHWPGIRQGPELELNSEQLQALVLGLPWQRMGSGGARSSTSY
GSTPGSQASGQCVVICSGNERAMNCVSIRTRPCESVRSPRITGSLLQRAR
ASARLMCSN
>PFL_2390 hydrolase, NUDIX family
MPRLVSANGLHPMSEPRIRALALCIFHHQGKILVNQFFDADKQQMLFRPL
GGGIDFGEHSAQAIVREIQEELGLSINSLRLIGTLESLFTYAGKPGHEFV
QVYDARFDDPSVYQCAQLDARESDGAPFVARWQGSASFTEQTPLVPAGLA
DLLKQAGLLG
>PFL_2409 oxidoreductase, 2OG-Fe(II) oxygenase family family
MTPPEIDFFPDFIADPHRLFNHLKDSVLWDERMRARKTASFGAPYDYSQI
TYPAVPMPEALEQLCGPIEQLLGFRPNNCLLNCYPDGHSSMGFHSDANEQ
LVTGTGVVIVSLGHARAMVFRHKESGATFDYSLASGSLLHMSDELQKHWL
HAIPKAPDAGERISLSFRQLKTG
>PFL_1057 endo/excinuclease domain protein
MTSPLSSSSAETAQPATDAKPWFVYLVRAANGALYCGISDDPVKRFAKHQ
SGKGARFFLSSPAVALVYTEACRDKGEALRQERLIKKLRKSAKECLVASA
TAAASI
>PFL_5789 DNA ligase, NAD-dependent, putative
MLPRAVVLLSLTPFFAQAACPDWPVPRATDEITALQQQLQRWDSSYYRDG
RSLVADELYDQARQRLLTWRQCFPQAPRAMDQPLLGAGGSIRHPIPHTGV
EKLADANAVTGWLKGRDDIWAQPKVDGVAVTLIYHRGQFQQALSRGDGVH
GHDWTRAAWQIEAIPKRLPRPVDLLLQGELYLRLEQHVQARSGSLKARNR
VAGWMARKQLTAAEAAQIGLFVWDWPQGPATLSERLEQLADLGFAEPREY
SRPVGGFADAQQWRARWYRSPLPFASDGIILRQSRRPAAERWQAKAPYWI
AAWKYPYAQVLASVRQVDFRIGRTGRITPLLEIEPVTLDDRQIRRVSLGS
LQRWRSLDIVPGDQVAISLAGLSIPRLDEVVLRSTLRQSIQPPREADFHF
LSCWQPSPGCEEQFLARLTWLSSKQGLNLQNIGSRTWARLVETGRIKGLL
DWLTLDQAELANIAGFGDRSSKRLLESLHSARQQPFPRWLKALGIPPSGS
ADLSGPWQALAMKNSLDWQNEAGIGAERAAQLVAFFRAPEVLALQGALNS
AGIEGF
>PFL_5229 conserved hypothetical protein
MQECGNCHGLQRISTPMSFSPEERAALLKVKGVGSTVVARLEQLGITSLA
QLAAADALHIVTQASALVGSSCWKNSPQARAAIQAAIAMAKGN
>PFL_4459 conserved hypothetical protein
MHDYKWLNEYCLNRFGSAAALEAQLPTPASDDYLRALSADRYLSTLALRV
FRAGLKHSLVDAKWPAFEQVFFGFDPDKVVLMGAEHLERLMQDTRIIRHL
GKLKSVPRNAQMILDVQKQHGSFGAFIADWPVQDITGLWQYLAKHGNQMG
GLSAPRFLRMVGKDTFIPTWDVVAALNAQNIIDKVPSSKRDQALVQEVFN
QWQQESGRPLCQLSAMLAYTVNH
>PFL_3699 conserved hypothetical protein
MGAVVALDSLFNAGRVWKGRPAAAPASPQPTGHAALDAVLPTGGWPEAAL
TEILIAAQGLGELQLLWPSLARLSAAGERIVLVAPPFVPYPQAWQNAGVD
VRQLSIIQAGERDALWAAEQCLRSGSCGAVLCWPQQADDRALRRLQVAAE
SGQTLAFAYRPLETARNPSPAALRIAVQGRPGQLRVLKCRGGLAHPAPIA
WPAGH
>PFL_4406 recombination associated protein rdgC
MWFKNLLIYRLTQDLPFDAEALETALATKLARPCASQELTTYGFVAPFGK
GEDAPLVHVSQDFMLVAARKEERILPGSVVRDAVKEKVEEIEAEQMRKVY
KKERDQIKDEIIQAFLPRAFIRRSSTFAAIAPKQGLILVNSASPKRAEDL
LSTLREVLGTLPVRPLTVKIAPTAIMTDWVKTQKAADDFFVLDECELRDT
HEDGGIVRCKRQDLTGEEIQLHLSTGKVVTQLSLAWQDKLSFMLDDKMVV
KRLKFEDLLQDQAEQDGGDEALGQQDASFTLMMLTFGDFLPALFEALGGE
EIPQGI
>PFL_3415 DNA topoisomerase I, putative
MPDACDTPDLPADLHYTDDRQPGIRRRKLRGKFVYYDAQGQRLTQAAEVQ
RINALAIPPAYAEVWICPDPKGHLQATGRDARGRKQYRYHPRWREVRDGD
KYARLLAFGNALPKLRRQLQAQLAVPGFSREKVMATLILLLDETLIRVGN
SQYARDNRSYGLTTLRNRHVQVSGSAIHFQFRGKSGVEHQITVKDPRLAR
VVKRCLELPGQQLFQYLDEDGQRHHVSSSDINACLQQLTGADFTAKDYRT
WAGSVLALERLRQQPWEPQAEAKRHIVATVKEVARELGNTPAVCRKCYIH
PALLERFVLGELAQLPKARARQGLKAEEAGLANFLRRLAKEAQPG
>PFL_3792 DNA-cytosine methyltransferase
MPITYGSVCSGIEAATVAWHPLGWRADWYAEIEPFPSTVLAHHYPEIPNH
GDMTKLGAQVLAGKIAAPDILVGGTPCQAFSVAGMRGGLTDPRGALTIKY
VELADAVDYVRAGQRKAASIVVWENVPGVLSDKGNAFGCFLGALAGEDCE
LRPAGAKWTDAGSVYGPKRTIAWRVLDAQYFGLAQRRRRVFVVASARDGF
DPTEVLFEREGVRRDTAPRRGEGQDVTGTAPFCAALQCGCGYVFAESLGP
YGCPNCEGDEGPAVDMFGGIPAFGGHSLSGSIERAATLTAKDTRLDIESE
TFFVAPTLAGGGRKNGGYSYDDVPCVAATLDASYGRLQGCSGQDANHGHS
HLVVHGTQDPCVSADQAHTLGRNNGQENALLMAFTQNSRSEVRYIGGDGQ
VVGALAAEAGVQQQNYLYCREVAQTVTSNYGKQLDNTNSAMGPNVVTHAI
QAGALRTNPDSGPDGVGVQANRAYTLEARAEVQAVQAGSAVRRLTPRECE
RLQGMPDDYTLIPWRGKPASECPDGPRYKAIGNSKAVTVVRWIGQRILQQ
L
>PFL_3229 ATP-dependent DNA helicase, UvrD/Rep family
MLLIRDSRNTEHRPPGVDDRLFDDWRLPLSPELKKRFKADVARLLPAAAQ
PSAAQWKMIFSDTPATAVIAGAGAGKSTSLVLRLLLLHHYLGFELDAMTV
VTFTRESRKDFITKLTQVFALWGRQLGAREARELVRTFHSRILPMVRSLP
GFERLQAFENLSDRLQGGEDEVDSNPFDLRINDAQRRHLNACYQALYRDD
PRFRLALQPLVRHALQLKELERDHPDVQKRMAVTELAAKRDEELCDTVED
LWFRAGAWPIKGIEPQRQRFEINGATFHSHGYCAELDAWVVLGFDPRESP
QLTRPGAKLTVRAEWAVKRTLFQAFCRKPLIWLDSYEASKRSAGAFSAQV
NGGPGFDYKVKGELASAPLLDCFVAAAGFIENLGLEVGDAVAGMSFAQDD
PDRFFFEALSLFWRALEDHLLDQSPPIMSYNRMFALFSERSPENFKLLSD
ACLRPMSHLMIDEFQDVSPQIVSWIRASLAAIRSRGAALHIGRAAQHSSL
LCVGDDWQSIYGWRGSSPKYFIEFNKEFPSPGTTRVMLSENYRSHQHVID
AAEHIVRAAPAIAGKKAKASGEATELWPVQVLDRDDQGLAQRLAEHYEQG
DSILMLFRKSSDKLLIENVISQIVNVDSNLPPGSRRLKQLTYHSAKGLQA
DAVFLLGDCQHLSSSPYKNQVYRMAGLGKDGDAEPYDSAQKDEILRLAYV
GITRAAKHCYWYVDRQEGPSGNAPKASDRVPRDKPYFQDLRRAT
>PFL_1307 RNA polymerase-associated protein HepA
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNA
PLTRVRFSPGDSITHFEGWKMTVQEVDDVDGLLVYHGLNGQNEAVTLPET
QLSNFIQFRLASDRLFAGQIDPLAWFSLRYHTLEHTSRQLQSSLWGLGGV
RAQPIAHQLHIAREVADRIAPRVLLADEVGLGKTIEAGLVIHRQLLSGRA
SRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDASNPFEDTQLA
LVALEWLVDDEKAQDALFAAGWDLMVVDEAHHLVWHEDQVSPEYALVEQL
AETIPGVLLLTATPEQLGQDSHFARLRLLDPNRFHDLAAFRAESENYRPV
AEAVQELMDKGRLSPEAHKTIHGFLGNEGEALLAAVNDGDSEASARLVRE
LLDRHGTGRVLFRNTRAAVQGFPERKLHAYPLPCPDEYLELPLGEHAELY
PEVSFQAQPDVSDDEQRWWKFDPRVEWLIDQLKMLKRTKVLVICAHAETA
MDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGAQVLICSEIG
SEGRNFQFAHHLVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETS
PQERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENADDGEWQALI
DAARGERERLEAELHTGRDRLLELNSGGAGEGDALVEAILEQDDQFALPI
YMETLFDAFGIDSEDHSENALILKPSEKMLDASFPLGDDEGVTITYDRNQ
ALSREDMQFITWEHPMVQGGMDLVLSGSMGNTAVALIKNKALKPGTVLLE
LLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSARVAFETLNDQLES
VPKASANKFIQAQRDQLAPKINAGEAKVAPRHAERVAEAQRRLAADTDEE
LARLTALQAVNPTVRDSELVALRQQREQGLAMLEKAALRLEAIRVLVAG
>PFL_0677 isopentenyl-diphosphate delta-isomerase, putative
MVATDKEAAHRAASDAEQIAWVDGEDQLLGAMVRSELRERGLIGRGTYIM
LFNSAGELCVHRRTLSKAIYPGYWDVAAGGMVLASESYAESAARELEEEL
GVSGVELVAHDHFFFEDTGNRLWCSAFCAVWDGPLRLQPEEVLEAHFMPL
DQVLREIHEKPYCPDSLAALQRYLARRR
>PFL_4731 hydrolase, NUDIX family
MKQRATVICCQDRQWLYVRKSKADWTLPGGRIEPGETPVETGWRELQEET
GITARDLRYLMLYHDGDCLHHVFQARLEEREHPVPANEIADCRWRRVDRQ
SSVKPRIRRLIASVMAHYPDLPVDH
>PFL_6057 exodeoxyribonuclease III, putative
MRIISVNVNGIQAAVERGLLSWLQAQNADVICLQDTRASAFELDDPAFQL
DGYFLYACDAEVPAQGGVALYSRLQPKAVISGLGFETADRYGRYLQADFD
KVSIATLLLPSGQNGDEDLNQKFKLMDDFARYLDKQRRKRREYIYCGSLY
VAQQKLDIKNWRDSQQSPGFLAPERAWMDEIIGNMGYVDALREVSREGDQ
YSWWPDNEQAEMLNLGWRFDYQLLTPGLRRFVRSARLPRQPRFSQHAPLI
VDYDWTLTI
>PFL_6078 ppkA-related protein
MASVYLATQRSLERKVALKVMAAALAADPSFCERFLREGKTLARLSHPHT
VTIHDIGNVGELYYMAMEYLPNGTLKERIAAGLTPEQGLTYIRQIASALG
YAHAQGLVHRDVKPANILFRADGTAVLSDFGIAKSLDDRTQFTQAGFAVG
TPSYMSPEQARGQDIDGRADLYALGVVLYEILVGELPYNGTDALSTALAH
LTEPLPELPLHHGRYQHILRKLLAKDPAERYPDAAALLAALDNLPAATAE
VEATLIQPLPLPPQAASQPVPQGNDLAGLTPVSIEIPQQAPRPAPRREPP
EEPPAPPRTANLPPAGSGPSEQRRGPVLALAGVAVAVALAVAGAGYWWLS
GDSPAPEPKTASTAGTTPAVVAPPASQPVAADVDGGQRPLLMPGKKTLFQ
RVLSKPGASFSSEPGAAPGQAVPAFSVLYVYQRKNLDGRSWLRLGAASDG
RSAGWLPAEQVSDWKQSLVLKFTERSGRAPVMFVRQASELERLLADPAAA
KNLLLKAQKNPQDEQQVLALEPNASAVPQDQFYLLPIFDSKESFDDNGQP
VQLLNVASIDPGNSPQSISDSSGKRLPANAPPAAGDAFRTAVVLVVDTSV
SMQPYIDQVRDVVHELQSKIAQRGELDSVSFGLVGFRNNTSKTPGLEYVT
KTLVTLDQGRDPQRFQELVSQVKATSVSSHSFNEDAFAGVMQAVEGMDWK
GYGGRLILLVSDAGALRKNDPYSRTQMNEAEVRQAALGKQIKIYALHLRT
DAGKKNHAQAETQYRVLTADANPKIGDLYIPVPGGDVGKFGERVDEIGTV
FADLVHQVRSNQSQEVPVLAAAPSIAQKSAAIGYAMHMDFLGRKSASQAP
QLVSAWTADRDLTNPALPAFQVCVMLTKLQLNDLQQSLKLIVDAARKTQT
SPKDFFQEIASASAYMSRDPSALRKGGNLADGGVLGEYLEGLPYRSKSLS
MTQDLWLSLSVAEQEDFIDELDSKIRLYETFHNDLANWVRFGDAEPGDAL
YRVPLSTLP
>PFL_3010 site-specific recombinase, phage integrase family
MGKIAAQSDQVSVETLTQVQALPQLPSIIRYLDDFADEWRVVRNTEADEW
EINANGIKDSLNFSSLPHPYRLLAKHWAAWTMARLSISTVRTYLHSLKPL
FDQENSNPLYELLSRNPMELRDYWQGTLRIGYSHFTLSAAKSLLAFLCEM
SLGHLVPEYADFVRSFELPPQDKYTAVRTGDVFLGANDETEIVGFLDETN
ALVRTSPARVDEQTLRSACILCISYQYAMRPLQIAKVRLSDVRIYPGLGK
DGPSIHITFLRSKQRSSDKRLPMLRKIKNEWAFTFAELYQRRLTNPHCQI
DALALPDSLFGLTPQSVGSLIIKITESITGVPHSANHLRHSAAQRLVDAG
ASQAELAEFMGHSYADTGLVYFDASPAQADRINKALALSPIYTNVADIAL
TRTIDRDKLLSLSPDYQIGAVPHGIPIAGIGACNLGQSLCSKNPVLSCYS
CHRFMAVTDTAIHHEVLDSLRPVVRFFYDESRGEVASPAYMQLRKTLESI
KVVIADLEESDPHE
>PFL_0057 radical SAM domain protein
MFNPLPPRGRGTASNPHNRFAPNRSVAEDDGWYQEVPLTQGTEVRFETAK
SIITRNSSPDLPFDRSINPYRGCEHGCIYCYARPSHAYWDLSPGLDFETK
LIAKSNTAALLEQQLSKPGYRCAPINLGSNTDPYQPIEREQQLTRRTLEV
LLRYRHPVTIVTKGSLILRDLDLLSELARQRLVAVMISLTTLDDELKRIL
EPRAAAPKARLRAIRVMRGAGIPVGVLCSPMIPMINDSELESLLSEAHAA
GAQSAAYMMLRLPLEVAPLFEEWLAAHYPQRAAHVLSLIRQSRGGELYDS
RFGARMRGEGPFADLLAQRFAKALKRLGLNRREGFDLDCSAFCPPGGQMS
LL
>PFL_0517 conserved hypothetical protein
MRLSELKNSGRSPTLPLSLELADAAGPAQLQLLSLLRVLPGQRYVGAGVW
RGRPVLAKLLVGSKAARHFQRELQGVRLLAEQGLTTPLLLADGLQEGEGG
WLLFELLQGAQSLGDAWKQVEALPVLADEQAEVLAEALGAIGQLHAKGLW
QSDLHLDNLLRHDNRLYLIDGAGICVEEAGKPLSRQKVLENLGVFFAQLP
KSLEPFTEELLVHYLLSNAEHALPLEALQKQVNKVRGWRLRDFLNKVGRE
CTLFSVQRGPFALRAIRREEEAAMLPVLEQADALLDQGHLYKTGGAASVG
RVEVAGRPLVIKRYNIKGFAHWLKRFWRPSRAWHSWREGNRLAFLGIATP
KPLALLERRFLWLRRSAYLVTEHLPGPDIIERFAPFVDSGQAPEPELLAL
DQLFAELIKERISHGDFKGHNLFWQEGRWALIDLDSMCQHSSLSSFALAY
ARDRARFMRNWPQDSNLYQVIDQRLPKTAQGTEA
>PFL_3009 site-specific recombinase, phage integrase family
MARVRLRDPCIPPSLTGWLLIDDQGLPRYWATVWTALHGAALRQSTLSSH
LSVIESFYGSVKLQLNEDCLDQLIANLCFDKLERCLEGFFVSLCNRNAQN
GADNSGDWRTAIAFVRNCVERLAYSSTTTPMDEVHSRLLRLERLYSTLNL
RRKRRPEIARALPAAVIEDLYELIQPDSTRNPFRTEALRWRNFALVLLML
HQGLRRSETLVLAADAIKESSSIQSQGVRCWLDVVENPYEHSDSRADAPS
IKNANSVRQIPVSDSIVSVIETYTANYRGRPQHSFLFSSQEGKPLSKRSI
NAFFSVLSEHLSKDAMQELCERRKLKSLTPHALRHTCAVIRLTHLIDAGV
EMDLALQKLRVFFGWARPSLMPHHYARAYFEDRLATVWHDSFDLHVVALR
KLSDRGM
>PFL_3409 ada, ADA regulatory protein
MTALSRKHRIEQDPRWQAVLKRDASADASFVYAVRTTGVYCRPSSLSRLP
KAENVEFFDSAEQAEAAGYRPSKRLASDQTQVAAHHATLVALACRQIEGA
ETPPSLGQLAQQAGMSSYHFHRVFKAATGLTPRAYANAQRSRKVRSHLER
GQSVTEALYDAGFNSNSRFYEAADQLLGMTPSDYRAGGPNTDIRFALGQC
SLGAILVAQSARGVCAILLGDEPGPLLEQLQDKFPRANLIGADRDFERLV
AQVVGFIEAPAIGLDLPLDLQGTVFQERVWQALRSIPLGSTASYAEIAQR
IGAPKSMRAVAQACAANSLAVAIPCHRVVRSDGSLSGYRWGVERKRQLLE
REAACEASMPM
>PFL_0379 ada, ADA regulatory protein
MENAPLLFQLPDDDTLYQALLARDPAYEGFAFVGVKSTGVFCRLTCAARK
PKRENTVFFGSIKGCVEAGFRACLRCRPLERAGVQEPWVQTLLEQLGRDP
ERRWYEDDLVAQGLDPSTVRRAFKRYFGVTFLEMARLRRMGQGMQQLASG
EPVIEAQISAGFDSDSGFRHAFSRLAGQPPSNLRGRELLKVDWLQTPIGV
MLAVADAQVLHLLEFFDRPALANELQNLQKSSGSSIGFGRFAPIDQIEAE
LQRYFAGEAVHFATPLAMSASPFTRTVWQALRAIPLGTTCSYAEVARQVG
SPSAVRAVARANAANQISIVIACHRVIGADGSLTGYGGGLWRKRWLLEHE
RRLHHLQGASASGL
>PFL_4498 algZ, alginate biosynthesis transcriptional activator
MRPLKQAIYSSRTADKFVVRLPDGMRERIAEVARNHHRSMNSEIIARLEQ
SLIQEGALGEELSMRLDSPELSLHERELLQRFRQLSHRQQNALVSLIAHD
AEMAADAT
>PFL_4632 alkA, DNA-3-methyladenine glycosylase II
MIHHLPYQGAYDWPAMLGFLRARAIEGLEVVQGDTYARTFALAGGQGILS
VCPGPAGHLQVQLQGAEQAQLPQVLARLRRQFDLDADLSLINRHLARDPL
LAPLLAARPGLRVPGAWDGFELAIRAVLGQQITVQGAIRLAGKLVAVHGR
LLASPDPQWPGLTHLFPTPQVLSTANLADLGMPRSRARTLSAVAQALLDD
PLLFEPRASLQQGVERLLQLPGIGDWTAQYIALRQLRESDAFPAADVGLF
NAMARLQGLRPNARQLLARAEAWRPWRGYAAQHLWAAMG
>PFL_3408 alkB, alkylated DNA repair protein AlkB
MHCNDGGPATLGLFSDSDLQQPARVEVLGPQSRVLRGFALPWVEALLPQL
DAVLAAAPFRQMQTPGGFTMSVGLSSCGQLGWTTDRSGYRYSPIDPQSQR
PWPALPKVFQELAEAAAEAAGFPGFAPDSCLINCYRPGAKMSLHQDKNER
DYSAPIVSLSLGLPAIFLFGGRQRSDKSQRVALLHGDVVVWGGVDRLRYH
GVLALKDGHHPLLGQQRINLTLRRAG
>PFL_1843 b1345, integrase
MDLAQGTVTFRRSKVRGAYRVTKTRRSTRKVRLLAPAWDALQKIDALNRK
RKAETVDIVERDNKTVRQHKLHFVFLNTKSGLPHVSDFVVRDRFFKPHLL
AAGVYYHGPGQCRNTYASQLLTTGVASIDWIAEQMGHTNANMIRQHYGTW
INED
>PFL_1279 dinG, ATP-dependent helicase DinG
MISNELKTTIQGAYSRFLEAKSLKPRYGQRLMIAEVAKVLGDIDTDDEGR
RSGDPAVVAVEAGTGTGKTVAYSLAAIPTAKAAGKRLVIATATVALQEQI
VYKDLPDLMRNSGLNFSFSLAKGRGRYMCLSKLDMLLQEGHAQTATAQLF
EEEGFKIEVDEASQKLFTSMIEKLAGNKWDGDRDSWPTALEDADWARLTT
DHSQCTNRHCPNFGQCAFYKAREGMGKVDVIVTNHDMVLADLALGGGAVL
PDPRDTLYVFDEGHHLPDKAIGHFAHYTRLRSTADWLEQTAKNLTKLLAQ
HPLPGDLGRLIEQVPELAREIKTQQQFMFTACEQIADFRTGEDMEGRERP
RHRFVGGLIPEHMREMGLELKKGFSRLTDLFTRLTELLKEGMDGEVNIGI
ASNQAEEWYPLFGSLLARASGNWELWTAFTVEDPEDNPPMARWLTLAESG
SLFDIEVNASPILAAEMLRRNLWNVAYGALVTSATLTALGTFDRFRMRAG
LPKKAVTAVVPSPFHHADAGVLRVPDLRADPRDAPAHTAAIIRDLPELVE
GSRGTLVLFSSRKQMQDVFDGLDRDWRKQVFIQGNLSKQETLNKHKARVD
GGDSSVLFGLASFAEGVDLPGAYCEHVVIAKIPFSVPDDPVEAALAEWIE
ARGGNPFMEISVPDASLKLVQACGRLLRTEQDRGTITLLDRRLVTQRYGK
AILNALPPFRREIS
>PFL_1254 dinP, DNA polymerase IV
MQRKIIHIDCDCFYAAIEMRDAPHLASKPLAVGGSADRRGVIATCNYEAR
AYGVRSAMSSRHALTLCPDLVIVKPRMEAYREASKEIHTIFRDYTDLIEP
LSLDEAYLDVSESPSFAGSATRIAQDIRRRVSNQLHITVSAGVAPNKFLA
KIASDWKKPNGLFVITPDQVEDFVSELPVSKLHGVGKVTADKLGRLGIVD
CLQLRDWSKLALAREFGSFGERLWSLARGIDERPVQNDSRRQSISVENTY
DVDLPDLDSCLQKLPELMETLAGRMARIDSSYRPGKPFVKVKFHDFTQTT
LEQAGAGRDLESYRQLLTQAFKRGGKPVRLLGIGVRLQDMRGAHEQLELF
RGGV
>PFL_0001 dnaA, chromosomal replication initiator protein DnaA
MSVELWQQCVELLRDELPAQQFNTWIRPLQVEAEGDELRVYAPNRFVLDW
VNEKYLGRVLELLDEHGNGMAPVLSLLIGSKRSSAPRAAPNAPLAAAASQ
ALQAAAANAAPAAAPAPAPAPTSAPAKKAAAQKAAEVSEEPSRDSFDPMA
GASSQQAPVRAEQRTVQVEGALKHTSYLNRTFTFENFVEGKSNQLARAAA
WQVADNPKHGYNPLFLYGGVGLGKTHLMHAVGNHLLKKNPNAKVVYLHSE
RFVADMVKALQLNAINEFKRFYRSVDALLIDDIQFFARKERSQEEFFHTF
NALLEGGQQVILTSDRYPKEIEGLEERLKSRFGWGLTVAVEPPELETRVA
ILMKKADQAKVELPHDAAFFIAQRIRSNVRELEGALKRVIAHSHFMGRDI
TIELIRESLKDLLALQDKLVSVDNIQRTVAEYYKIKISDLLSKRRSRSVA
RPRQVAMALSKELTNHSLPEIGDVFGGRDHTTVLHACRKINELKESDADI
REDYKNLLRTLTT
>PFL_4437 dnaA, DnaA family protein
MKPIQLPLGVRLRDDATFINYYPGANAAALGYVERLCEADAGWTESLIYL
WGKDGVGRTHLLQAACLRFEQLGEPAVYLPLAELLDRGIEILDNLEQYEL
VCLDDLQAVAGKADWEEALFHLFNRLRDSGRRLLIAASTSPRELPVKLAD
LKSRLTLALIFQMRPLSDEDKLRALQLRASRRGLHLTDEVGHFILTRGTR
SMSALFELLERLDQASLQAQRKLTIPFLKETLGW
>PFL_4663 dnaB, replicative DNA helicase
MNPLDFTPPHSTEAEQGVLGGLMLDNNTWDLIADLLVPEDFFKREHRLIF
QAIASLADKDHPFDIVTVSESMSQPEEVGGLAYLGDLARNTPSVANIERY
AEIVRNRSHLRSLMSLGYQCSRDAAESTAVATDVQESIEQQLFALAQNRT
RSDFVDVNQALGAVINKIDEHFNGNVTVTGVSSGIDDLDEMTSGFQPTDL
IILAGRPSMGKTALALKFVHAALRQCSDNESVQVYSIEMPAQALLFRLIS
SIGHVDLTKLLKGKLEDEDWPKLTNAVHQLNGFGDRLVIDDGSSLTPAAL
RAKARRASRRFGKPKLILIDYLQLMSAVGEENRNNEISVISRSLKALGKE
MDCPVIALSQLNRSVEGRPNKRPVNADLRESGAIEQDADVIMFVYRDEYY
HPESEHKGIAEIIIGKQRQGPVGFARAAFIPQQTRFENLAPASWQGGGA
>PFL_0583 dnaB, replicative DNA helicase
MNDISAPEQYDLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSD
GDFYRHDHRLIFRAIAKLADQNMPIDVVTLSEQLDKEGQTSQVGGLGYLG
ELAKNTPSVANIKAYAQIVRQRATLRQLIGISTEIADSAFNPEGRTAEEI
LDEAERQIFQIAEARPKTGGPVGVNELLTKAIDRIDTLFNTDNAITGLST
GYTDLDEKTSGLQPADLIIVAGRPSMGKTTFAMNLVENAVLRSDKAVLVY
SLEMPGESLIMRMLSSLGRIDQTKVRSGQLEDDDWPRLTSAVNLLNDRKL
FIDDTAGISPSEMRARTRRLVREHGDIAMIMIDYLQLMQIPGSSGDNRTN
EISEISRSLKALAKEFNCPVVALSQLNRSLEQRPNKRPVNSDLRESGAIE
QDADVIMFVYRDEVYHPETEHKGIAEIIIGKQRNGPIGFIRLAFIGKYTR
FENLAPGSYNFDDDE
>PFL_1191 dnaE, DNA polymerase III, alpha subunit
MPASFVHLRLHTEYSLVDGLVRIKPLVKALAGMGMPAVAVTDQNNMCSLV
KFYKTSMGAGIKPICGADLWLSNKDPDNPLSRISLLVMNAVGYRNLTELI
SRGFIDGQRNGQIIIEREWVAEAAEGLIMLSAAKEGEIGMALIAGDLEVA
ETLAREWMAVFSERFYLEVQRTNRPNDEEQLHAAVALADKIGAPLVATND
VRFIKQEDFEAHETRVCIGEGRALDDPRRSKNYSDQQYLKSAEEMAELFS
DLPEALENTVEIAKRCNIEVKLGKHFLPDYPIPDGMTIDEYFRKVSFDGL
EERLSVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFI
QWAKSNGVPVGPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVS
MPDFDVDFCMDGRDRVIDYVAEKYGRNAVSQIITFGSMAAKAVVRDVARV
QGKSYGLADRLSKMIPFEVGMTLEKAYEQEEILRDFIKVDEEAAEIWEMA
RKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEEGGGLVTQFDKDDVEA
AGLVKFDFLGLRTLTIIDWALKTINRDRAKVGEEPLDIAFIPLDDKPTYS
LLQKAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMV
DDFINRKHGRAELAYPHPDYQYDGLQPVLAPTYGIILYQEQVMQIAQVMA
GYTLGGADMLRRAMGKKKPEEMAKQRGGFIEGCASNNIDADLAGNIFDLV
EKFAGYGFNKSHSAAYGLVSYQTAWLKAHYPAPFMAAVLSADMHNTDKVV
TLIEEVRIMKLRLDAPDVNTSEFKFTVNDEGRIVYGLGAIKGVGEGPVEA
ITEAREAGPFKDLFDFCARVDLKRINKRTLDGLIRSGALDRLGPHFFDEP
KAYQANIDQNRAVLLAAMEEAIKAAEQTARTHDSGHADLFGGVFVDEDAD
VYANHRKAKELTLKERLKGEKDTLGLYLTGHPIDEYEGEIRRFARQRIID
LKPARDTQTVAGMIIALRVMKNKKGDKMGFITLDDRSGRIEASLFADAFH
SAQSLLQTDAMVVVEGEVSNDDFSGGLRLRVKRVMSMEDARTNLAESLRL
KIHSDALKGDQLRWLGDLFKRHRGACPITMEYTRDDAKALLQFGENWRID
PADSLIQALRDQFGRDNVFLQYR
>PFL_5662 dnaG, DNA primase
MAGLIPQSFIDDLLNRTDIVDVVSSRLQIKKAGKNYTACCPFHKEKTPSF
SVSPDKQFYYCFGCGAGGNALGFIMDHDNLDFPQAVEELAKAAGMEIPRE
ESSRGQRKPRQPTDSPLYPLLTAAADYYRQALKSHPARKAAVDYLKGRGL
TGEIARDFGLGFAPPGWDNLFKHLSSDTLQQKAMIDAGLLIENAETGKRY
DRFRDRVMFPIRDTRGRIIAFGGRVLGDDKPKYLNSPETPVFHKGQELYG
LFEARKNNRNLDEIIVVEGYMDVIALAQQGLRNAVATLGTATSEEHLKRL
FRIVPNVLFCFDGDQAGRKAAWRALEATLTCLQDGRRARFLFLPEGEDPD
TLVRSEGTDAFRARINQHAQPLADYFFQQLIDEADPRSLEGKAHLATLAA
PLIEKIPGANLRTLMRQRLSEITGLTNETVNQLAHSAPPEAPPVYDAGID
YDAMPDYADYHEPHQEAYAPQQEWTPKKNAGGKKWENKPWDKNGKGKRQG
DRDQPRGPRIPAAVEPPTLSALRTLLHHPQLAEKVEDAGHFADDDNTNTQ
LLVALIEAVQKNPKLRSIHQLMARWHGTQQGHLLTALAEKEWLIDGDNLE
QQFFDTINSLSARQRERVLEQLLRKSRQSELSSEEKKQLVELLKRNVPAS
NPTSTGA
>PFL_0002 dnaN, DNA polymerase III, beta subunit
MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLE
VELVGRVQLEEPAEPGEITVPARKLMDICKSLPNDALIDIKVDEQKLVVK
AGRSRFTLSTLPANDFPTVEEGPGSLTCQLEQSRLRRLIERTSFAMAQQD
VRYYLNGMLLEVSAGIIRAVATDGHRLAMCSMQADIGQPDRHQVIVPRKG
ILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTSKLVDGKFPDYERVLP
KGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLANGQLKIQANNPEQ
EEAEEEVGVEYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALV
QESDNDDSAYVVMPMRL
>PFL_3294 dnaQ, DNA polymerase III, epsilon subunit
MANRSVVLDTETTGMPVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRE
SDEGAIGVHGITNEFLVGKPRFAEVADEFFDFIQGAQLIIHNAAFDVGFI
NNEFALMGQHERADITQHCTILDTLMMARERHPGQRNSLDALCKRYGVDN
SGRELHGALLDSEILADVYLTMTGGQTSLSLAGNASDGNGSGEGAGQASE
IRRLPADRPRGRIIQASDAELAEHQVRLEIIAKSAGAPALWTQLLETQQ
>PFL_5703 dnaQ, exonuclease
MSLFAWFRPAVSLLSAEQQQRRDRLPAFTELNESSLREQRWVVVDVETTG
LNLNRDQVLSIGAVVIEDGAIDFSQQFERTLQRQGHKLSPSVLIHGLGPS
AIAAGCDPVEALLDFMEFVGDSPLLAFHAPFDQHMLGRALKDSLGYRLQH
SFLDVADMAPLLCPQAQIREAGLDDWVRWFNLQVVERHNAAADALATAEL
ALILFNRARQQQIHSPLNLQQRLGQWKRRQQAPSF
>PFL_0024 dprA, smf protein
MSGSISPAELEARLRLHVLPELGPMRFQRLLQAFGCASKALRAPASAWRS
LDLPPACSEARRSPQVRDGARRALAWIDSQAQHLLMWDQPGYPPLLAQLE
DAPPLLFVAGDPSILERPQLAMVGSRRASRPGLDTAGAFSRSLARAGFVI
TSGLALGIDGAAHQAALDVGGRTVGVLGTGLENFYPQRHRALARAMIDQG
SAVVSEFPLDTPARAEHFPRRNRIISGLALGVLVVEASVASGSLITARLA
AEQGREVYAIPGSIHHPGARGCHQLIRDGAVLVESVQHILETLAGWQNLP
PSASLPTAACTHPLLALLHAAPHSSEALASASGWPLPRVLAALTELEIEG
RAVDENGRWYARLS
>PFL_2097 endA, endonuclease I
MSVRCFALLLLFLACSAQADAPRTFSEAKKVAWKLYAPQSTEFYCGCKYN
GNRVNLAACGYVPRKNAKRAERIEWEHIVPAWQIGHQRQCWQQGGRKNCT
RTDSVYQRAEADLHNLVPSIGEVNGDRSNFSFGWLPEQSGQYGSCLTQVD
FKAKKVMPRPSIRGMIARTYFYMSKQYGLRLSKQDRQLFEAWNKTYPVQA
WERQRNQSVACVMGRGNEFVGAVNLKACG
>PFL_0667 fis, DNA-binding protein Fis
MTMMTETLVSGTTPVSDNVNLKQHLNTPSEEGQTLRGSVEKALHNYFAHL
EGAAVTDVYNLVLSEVEAPLLESVMNYVKGNQTKASELLGLNRGTLRKKL
KQYDLL
>PFL_4314 gyrA, DNA gyrase, A subunit
MGELAKEILPVNIEDELKQSYLDYAMSVIVGRALPDARDGLKPVHRRVLY
AMSELGNDWNKPYKKSARVVGDVIGKYHPHGDTAVYDTIVRMAQPFSLRY
LLVDGQGNFGSVDGDNAAAMRYTEVRMTKLAHELLADLHKETVDWVPNYD
GTEMIPAVMPTKIPNLLVNGSSGIAVGMATNIPPHNLGEVIDGCLALIDN
PELTVDELMQYIPGPDFPTAAIINGREGIIEAYRTGRGRIYMRARSIIED
IDKVGGRQQIVITELPYQLNKARLIEKIAELVKEKKLEGITELRDESDKD
GMRVVIELRRGEVPEVILNNLYAQTQLQAVFGINIVALIDGRPRILNLKD
LLEAFVRHRREVVTRRTVFELRKARERGHILEGQAVALSNIDPVIALIKA
SPTPSEAKEALISTPWESSAVMTMVERAGADSCRPENLDPQYGLRDGKYF
LSPEQAQAILELRLHRLTGLEHEKLLAEYQEILNQIGELIRILNSATRLM
EVIREELEVIRAEYGDVRRTEILDARLDLTLGDMIPEEERVVTISHGGYA
KTQPLAAYQAQRRGGKGKSATGVKDEDYIAHLLVANSHTTLLLFSSKGKV
YWLKTYEIPEASRAARGRPLVNLLPLDEGEYITTMLPVEEYTEGHYIFMA
TANGTVKKTPLESFSRQRSVGLIALELDEGDVLISAAITDGEREVMLFSD
GGKVTRFKESDVRAMGRTARGVRGMRLAEGQKLISMLIPEEGSQILTASE
RGFGKRTAIGEFPEYKRGGQGVIAMVSNERNGRLVGAVQVLDGEEIMLIS
DQGTLVRTRVDEVSSLGRNTQGVTLIKLASDETLVGLERVQEPSEIEGEE
FEGEEGAEFEGAVLDAVADTDEAAEGQQADAAGEEESQD
>PFL_0004 gyrB, DNA gyrase, B subunit
MSEENTYDSTSIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVFEVVDNSI
DEALAGHCDDISIIIHPDESITVRDNGRGIPVDVHKEEGVSAAEVIMTVL
HAGGKFDDNSYKVSGGLHGVGVSVVNALSEELILTVRRSGKIWEQTYVHG
VPQERMKIVGDSETTGTQIHFKPSAETFKNIHFSWDVLAKRIRELSFLNS
GVGIVLKDERSGKEELFKYEGGLRAFVEYLNTNKTAVNQVFHFNIQREDG
IGVEIALQWNDSFNENLLCFTNNIPQRDGGTHLVGFRSALTRNLNNYIEQ
EGLAKKHKVATTGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAV
EQEMGKYFSDFLLENPNEAKLVVGKMIDAARAREAARKAREMTRRKGALD
IAGLPGKLADCQEKDPALSELYLVEGDSAGGSAKQGRNRKTQAILPLKGK
ILNVEKARFDKMISSQEVGTLITALGCGIGREEYNIDKLRYHNIIIMTDA
DVDGSHIRTLLLTFFFRQLPELIERGYIYIAQPPLYKVKKGKQEQYIKDD
DAMEDYMTQSALEDASLHLNEEAPGISGEALERLVNDFRMVMKTLKRLSR
LYPQELTEHFIYLPAVTMEQLSDHAAMQDWLAKYDARLRTSEKSGLVYKA
SLREDRERNVWLPEVELISHGLSNYVTFNRDFFGSNDYKTVVSLGAQLST
LLDEGAYVQRGERKKAVTEFKEALDWLMAESTKRHTIQRYKGLGEMNPDQ
LWETTMDPSMRRMLKVTIEDAIGADQIFNTLMGDAVEPRRDFIESNALAV
SNLDF
>PFL_5441 holA, DNA polymerase III, delta subunit
MKLAPAQLGKHLQGTLAPIYVISGDDPLLCQEAADAIRSAVRQQGFDERQ
VFSADASFDWGTLLQAGASMSLFAEKRLLELRLPSGKPGDKGAAALIEYC
SRPAEDTVLLISLPKLDGSAQKTKWGKALVEGAQTQFVQIWPVDANQLPQ
WIRQRLSQAGLSASQDAVELIAARVEGNLLAAAQEIEKLKLMAEGGQITV
ETVQAAVADSARFDVFGLVDAILNGEAAHALRMLEGLRGEGVEPPVILWA
LSRELRLLANLALQFSQGVPLDKVFSQARPPVWDKRKPLMSKALQRYSAQ
RWGQLLLDAQRIDAQIKGQASGSPWSSLSRLSLLMAGQRLALAAE
>PFL_1802 holB, DNA polymerase III, delta' subunit
MAEVFPWQDSLWQQLAGRTQHAHAYLLHGPAGIGKRALAERLMARLLCQR
PEGLDACGQCKSCLLLLAGSHPDNYVLEPEEADKAIKVDQVRELVSFVVQ
TAQLGGRKVVLIEPVESMNINAANALLKSLEEPSGNTVLLLVSHQPSRLL
PTIKSRCVQQACPLPSEAMSLEWLAQALPDCSEEERVELLTLAAGSPLAA
VSLQAQGVREQRAQVVEGVKKLLKQQQSPTQLAESWSAIPLLLLFDWFCD
WSNLVLRYQLTQDEQGLGLQDMRKVLQYLAQKSAQAKVLNIQDWILAQRQ
KVLSKANLNRVLLLEALLVQWAALPTQN
>PFL_1065 holC, DNA polymerase III, chi subunit
MTKVDFYILPSADPAARLDFACKLTDKAWRMGHRIYLHCSDAEQRDELDA
RLWRFKGETFVPHGPAESEPEGLIVLGLGQDPGPHNDLLVNLDLKVPAFA
PRFARIAEVVVEDPAIRQAARESFRFYREQGYPLQDHRLQRL
>PFL_1531 hrpA, ATP-dependent helicase HrpA
MTDESPAIDQLLKNLDQAMLGDRHRLRRQLLELRKKPDEAKLAQWLERMQ
ASCNLVTARRQSVPQIRYDDSLPIAAKRDEIKEALLKHQVLIIAGETGSG
KTTQLPKICLEIGRGQHGLIGHTQPRRIAARSVASRVAEELATPLGSLVG
YQVRFEDQSDSSTLIKLMTDGILLAETQNDRYLERYDTIIVDEAHERSLN
IDFLLGYLKTLLPRRPDLKVIITSATIDLERFSKHFDNAPIVEVSGRTFP
VETWYRPLTLEQDEEGNRVEDDLTVDQAILATLDEIAAHERSERRSPGDV
LVFLPGEREIRDAAEMLRKAQLKHTEILPLYARLSPAEQQRIFQSHPGRR
VVLATNVAETSLTVPGIRYVIDSGTARISRYSYRAKVQRLPIEAISQASA
NQRKGRCGRVEPGICVRLYSEEDFLGRPEFTDPEILRTNLAAVILQMLHL
RLGEITAFPFIEPPDGKAISDGFNLLQELSAVDRNSQLTPLGRQLARLPV
DPRMGRMLLEAAKLGSLQEVLIVASAMSIQDPRERPPERQQAADQAHAQW
KDVDSDFAGLVNLWRGFEEQRQALTASPLRNWCRKNFLNYLRLREWRDSH
RQLSLICRDLQLSLNKEPADYPKLHKAVLVGLLSQIGQKTEDGDYLGARQ
RRFWIHPSSGLGKKRPQWLMTAELVETTKLYARMVAKIEPDWIEPLAGHL
VKKNHFEPHWEKKRGQVVAYEQITLFGLIVVGRRPVHYGPVDPVVSRELF
IREALVRGEIQSKAKCLSANTQLLEQLDALEAKARRRDILADEETLFAFY
DARLPAEIHQTATFDSWYRVHSQKNPQLLIMREEDVLAREASEVTAKQYP
DTLHIGDLELALSYHFEPNHPRDGVTLRVPAPLLPALPAERLEWLVPGLI
EAKCIALVRNLPKALRKNFVPVPDFVKAALQRMVFAEGSLPQALGRELLR
MTGARVSDEAWSEAEQQVESHLRMNLEIVDAQGKFLGEGRDLAELTARFA
EASQAALAVPQTAKSQQPVQAKVFAAVAEKTQQKIAGLSMTVYPALVEEA
GTVKEGRFSTAAEAEFQHRRALQRLLLQQLAEPAKFLRGKLPGLTELGLL
YRELGRVDALVEDILLASLDSCILEGEAVLPRDGAGLASLAERKRGAWTE
HAERLARLTLEILKLWHGLQKRFKGKIDLAQAVALNDIKAQLANLVYPGF
VRETPALWLKELPRYLKAVELRFEKLGSQVQKDRVWSSELTGLWSQYQTR
AQKHAQEGKRDPQLELYRWWLEEYRVSLFAQQLGTKVPISDKRLSKQWSL
VDA
>PFL_5417 hrpB, ATP-dependent helicase HrpB
MNSLPIDEVLPALRTALATRHEAVLEAPPGAGKTTRVPLALLDQDWLAGQ
TILMLEPRRLAARAAAERLASELGEKVGETVGYRIRLDSKVGPRTRIEVV
TEGILTRRLQDDPALEGVGLLIFDEFHERSLDADLALALSLSGRELFRDE
QPLKILLMSATLEGERLSTLLGDAPILRSEGRMYPVTQRWGRPFQPGEFI
EPRVVQTVLEALNDESGSLLVFLPGQAEIRRVHQQLAEALGERSEILLCP
LHGELDLAAQRAAIDPAPSGKRKVVLATNIAETSLTINGVRVVVDAGLAR
VPRFDPGSGMTRLDTQRISRASATQRAGRAGRLEPGVCYRLWSADQQEQL
AAYASAEILQADLAGLALQLARWGVTPNQLVWLDAPPSAAYAQAQDLLVR
LGALNDDGSLTRHGQAMAELPAHPRIAHLLLRGQSLGLAPMACNVAALLG
ERDILRGAGADLHSRLVLLGGEERAARGAQGGVQRARQLARQYRGYLRGQ
PEAAVADPEHPRWLGALLALAYPDRVAQQRRPGGAEYRLANGRAALFSET
DSLMKQPWLVIADLGSRQGQREERIYLAADFDPVLFDSVLAEQVRQVDQL
DWDEREGVLRAERQRKVGELVLSREPLSGLDESARTQALVNLVRRKGLEL
LPWTPELRQWQARVALLRQLDLEATGTSQWPDVSDGALLKGLEQWLQPYL
GKVSRLSHFANLELAGIIHNLLPWPLPQRLDELAPHHLTVPSGSSIRLDY
SEHPPILAVRLQELFGLAQTPRIAGGRQVVKLHLLSPARRPVQVTQDLAN
FWRSTYAEVKKDLKGRYPKHYWPDDPLIAEATARVKPRK
>PFL_3984 hupB, DNA-binding protein HU, beta subunit
MNKSELIDAIAASADLPKAAAGRALDAVIESVTGALKAGDSVVLVGFGTF
SVTDRPARIGRNPQTGKTLEIAAAKKPGFKAGKALKEAVN
>PFL_1061 hupN, DNA-binding protein HU, nu subunit
MAITKDQLIADIAEAIDAPKTTARNALDQLAQIVADQLENGGEITLPGIG
KLKVTERPARTGRNPSTGAAIEIAAKKVIKLVVAKGLTDAVNK
>PFL_2117 ihfA, integration host factor, alpha subunit
MGALTKAEMAERLYEELGLNKREAKELVELFFEEIRHALEDNEQVKLSGF
GNFDLRDKRQRPGRNPKTGEEIPITARRVVTFRPGQKLKARVEAYAGTKS
>PFL_1893 ligA, DNA ligase, NAD-dependent
MTAAETRILELRAELDQHNYRYHVLDEPSIPDAEYDRLFRELKALEAEHP
ELVTSDSPTQRVGSAALSAFTQVRHEIPMLSLGNAFEEVDMREFDRRVNE
GLDLPAGDLFGGGAAVEYSCEPKLDGLAVSLLYQDGVLVRGATRGDGTTG
EDISVNVRTVRNIPLKLQGSGWPATLEVRGEVFMSKAGFERLNAAQLEAG
GKTFANPRNAAAGSLRQLDSKITASRPLEFCCYGLGQVSADIADTHIGNL
ERLKQWGMPISRELRLAKGIDECLDYYREIGERRNALPYEIDGVVFKVNS
IASQRELGFRAREPRWAIAHKFPAMEELTELLDVEFQVGRTGAVTPVARL
QPVKVAGVTVSNATLHNMDEVARLGLMIGDTVIIRRAGDVIPQVVQVVTE
RRPENARPVQIPESCPVCGSHVERTQLVKRSKGRETVSEGAVYRCVGRLA
CGAQLKQAIIHFVSRRAMDIEGLGDKTIEQLVDENLIASPADLYRLKYEQ
IIDLEGFAEVSSNKLLKAIEDSKRPALARFIYALGIPDVGEETAKVLARS
LGSLERVQQALPQVLTYLPDVGLEVAHEIHSFFEDSHNQEVIGSLLAADQ
CGLVLQDQGELGAEFAASTTLGGMLDKLNIPSVGPGAAQKLADKFGSLQG
VIEADWLDMRQALPEKQAKAVREFFDNPANAQLAQAIEQQLQAFGMHWQS
EKKVVAGLPLAGQTWVLTGSLELMSRDVAKDKLESLGAKVAGSVSAKTHC
VVAGPGAGSKLAKANELGLKVLDEEAFVAFLTEHGVPT
>PFL_1954 mfd, transcription-repair coupling factor
MPVLRLPLLPAAAGKQHWGNLPGAALSLAIAEAASAAKRFTLLLTADSQS
ADRLEQELSFFAPDLPVLHFPDWETLPYDLFSPHQDIISQRIASLYRLPE
LEHGVLVVPITTALHRLAPTQFLLGSSLVLDVGQKLDVEQMRTRLEASGY
RYVDTVYEHGEFTVRGALIDLFPMGSKLPYRIDLFDDEIETLRTFDPENQ
RSIDKVDSVRLLPAKEFPLQKEAVTRFKARFRERFDVDFRRCPIFQDLSS
GITPAGIEYYLPLFFEETSTLFDYLPQDTQVFSLPGIEQAAENFWNDVRN
RYEERRVDPSRPLLPPAELFLPVEDCFARLKNWPRVVASQQDIETGVGRE
RFPAHELPNLAIEAKANQPLAALSGFLDEFPGRVLFTAESAGRREVLLEL
LERLKLRPKTVDSWPDFVASKERLAITIAPLDEGLVLDDPALALVAESPL
FGQRVMQRRRREKRADANNDAVIKNLTELREGAPVVHIDHGVGRYLGLAT
LEIDNQAAEFLTLEYAEGAKLYVPVANLHLIARYTGSDDALAPLHRLGSE
AWQKAKRKAAEQVRDVAAELLDIYARRAAREGYAFADPKADYATFSAGFP
FEETPDQQSTIEAVREDMLSGKPMDRLVCGDVGFGKTEVAMRAAFIAVHG
GKQVAILVPTTLLAQQHYNSFRDRFADWPVTVEVMSRFKSTKEVNAAVAD
LAEGKIDIVIGTHKLLQDDVKIKNLGLVIIDEEHRFGVRQKEQLKALRSE
VDILTLTATPIPRTLNMAVSGMRDLSIIATPPARRLSVRTFVMEQNKSTV
KEALLRELLRGGQVYYLHNDVKTIEKCAADLAELVPEARIGIGHGQMRER
ELEQVMSDFYHKRFNVLIASTIIETGIDVPSANTIIIERADKFGLAQLHQ
LRGRVGRSHHQAYAYLLTPPRQQITPDAEKRLEAIANTQDLGAGFVLATN
DLEIRGAGELLGDGQSGQIQAVGFTLYMEMLERAVKAIRKGEQPNLDQPL
GGGPEINLRLPALIPEDYLPDVHARLILYKRIASATDEDGLKDLQVEMID
RFGLLPEPTKNLIRLTLLKLQAEQLGIKKVDGGPQGGRIEFAADTPVDPL
ALIKLIQGQPKRYKFEGATLFKFMVPMERPEERFNTLEALFERLTPKSA
>PFL_0564 mutL, DNA mismatch repair protein MutL
MSESVISSARIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRI
DVDVEQAGVKLLRVRDDGSGISSDDLPLALARHATSKIRDLEDLERVMSL
GFRGEALASISSVARLTLTSRTRDAEQAWQVETEGRDMAPRVQPAAHPVG
TSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALARFDVAFHLRHN
GKSILSLHEAKDDAARARRVAAVCGSGFLEQALPIEVERNGLHLWGWVGL
PTFSRSQADLQYFYVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFE
VDPSVVDVNVHPTKHEVRFRDGRMVHDFLYGTLHRALGDVRPEDQLAAPA
AVAGIVRPTGIEAGEFGPQGEMRLAANLALEQPQSQPSFNAPGAGAGSGY
QYQYTPRPQPVLPAAESQGVYREFFAPLPGAPAAALPDGQEDIPPLGYAL
AQLKGIYILAENALGLVLVDMHAAHERIMYERLKVAMASEGLSGQPLLVP
ESIAVSQREADCAEEHMSWFQRLGFELQRLGPESLAIRQIPALLKQAEAN
RLVHDVLADLMEYGTSDRIQAHLNELLGTMACHGAIRANRRLALPEMNAL
LRDMENTERSGQCNHGRPTWTQMGLDDLDKLFLRGR
>PFL_5870 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETTRRGIAPHLEGQKVSRVIVRDRRLRWPIPEDLDVRLSGQRI
VLVERRAKYLLINAEVGTLISHLGMSGNLRLVEVGLPAAKHEHVDIELES
GLALRYTDPRRFGAMLWSHDPLNHELLVRLGPEPLTDLFDGERLYQLSRG
RSMAVKPFIMDNAVVVGVGNIYATEALFAAGIDPRREAKGISRARYLKLA
IEIKRILAAAIERGGTTLRDFIGGDGQPGYFQQELFVYGRGGENCKVCGT
GLREIKLGQRASVYCPRCQS
>PFL_1209 mutS, DNA mismatch repair protein MutS
MSKNTSDLSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAK
LLDITLTARGQSAGQAIPMCGIPYHAAEGYLAKLVKLGESVVICEQVGDP
ATSKGPVERQVVRIITPGTVSDEALLDERRDNLIAAVLGDERLFGLAVLD
ITSGNFSVLEIKGWENLLAELERINPVELLIPDDWPQGLPAEKRRGVRRR
APWDFERDSAHKSLCQQFSTQDLKGFGCETLTLAIGAAGCLLSYAKETQR
TALPHLRSLRHERLDDTVVLDGASRRNLELDTNLAGGRDNTLQSVVDRCQ
TAMGSRLLTRWLNRPLRDLKVLEARQSSITCLLDGYRFERLQPQLKEIGD
IERILARIGLRNARPRDLARLRDALAALPELQEAMTELEATHLNQLAATT
STYPELAALLAKAIIDNPPAVIRDGGVLKTGYDAELDELQSLSENAGQFL
IDLEAREKARTGLANLKVGYNRIHGYFIELPSKQAEQAPADYIRRQTLKG
AERFITPELKEFEDKALSAKSRALAREKMLYDALLETLISHLPPLQDTAG
ALAELDVLSNLAERALNLDLNCPRFVSEPCMRITQGRHPVVEQVLTTPFV
ANDLSLDDNTRMLVITGPNMGGKSTYMRQTALIVLLAHIGSFVPAASCEL
SLVDRIFTRIGSSDDLAGGRSTFMVEMSETANILHNATERSLVLMDEVGR
GTSTFDGLSLAWAAAERLAHLRAYTLFATHYFELTVLPESEPLVANVHLN
ATEHNERIVFLHHVLPGPASQSYGLAVAQLAGVPSAVITRAREHLSRLET
TSLPHEVAPQAPGKPSVPQQSDMFASLPHPVLDDLAKLDLDDMTPRRALE
MLYTLKTRI
>PFL_0358 mutY, A/G-specific adenine glycosylase
MRAEAFSTAVLDWYDRHGRHDLPWQQDINPYRVWVSEIMLQQTQVSTVLN
YFDRFMASLPTVQALAEAPEDEVLHLWTGLGYYTRARNLQKTAKIVMAEY
GGEFPRDVEKLTELPGIGLSTAGAIASISMGLRAPILDGNVKRVLARFTA
QEGYPGEPKVAKQLWAAAERFTPHSRVNHYTQAMMDLGATLCTRSKPSCL
LCPLERGCEAHMLGLETRYPIPKPRKEVPQKRTLMPMLANREGAILLYRR
PSSGLWGGLWSLPELDGLDDIQHLALQHSLELGQQQQMPGLVHTFSHFQL
AIEPWLIRVEESALHVAEADWLWYNLATPPRLGLAAPVKTLLKRAAEVLN
AGESS
>PFL_4850 nth, endonuclease III
MNAAKRLEIFRRLHEDNPEPKTELAYSSPFELLIAVILSAQSTDVGVNKA
TAKLFPVANTPAAIYALGVEGLSEYIKTIGLYNSKAKNVIETCRLLVERH
NSEVPQTREELEALPGVGRKTANVVLNTAFRQLTMAVDTHIFRVSNRTGL
APGKNVVEVEKKLMKFVPKEFLLDSHHWLILHGRYVCLARKPRCGSCRIE
DLCEYKQKTSDD
>PFL_0297 nudE, ADP compounds hydrolase NudE
MRQKPTVLAREIVATSRLFCVEEVQLRFSNGVERTYERLVGKGAGYGAVM
IVAMLDAEHAVLVEEYCGGTDAYELSLPKGLIEPGEDVLAAAERELKEEA
GFGARQLEHLTELSLSPGYMSQKIQVVLATDLYEERLEGDEPEPMRVDKV
NLRELASLAQNPQFSEGRALAALYLTRDLLSQRGVFQA
>PFL_0541 nudF, ADP-ribose pyrophosphatase
MTDFANSTPSAVEIIRRENCFQGFYRLDRLQLRHELFAGGMGREINREVF
VRHDAVCVLPYDPQRDEVVLIEQFRVGAMGKTASPWLVELVAGLIDKDEQ
PEQVARREAQEEAGLDISALWPMTQYFPSPGGSTEFVHLYLGRCDSSAAG
GLHGLEEEAEDIRVCVMAYEDALQAMRDGRICNAASIIALQWLALNRAEV
RGLWS
>PFL_3331 nudF, ADP-ribose pyrophosphatase
MSEETIRITAEQTLSDNWYVLKKYSFELRRRDGSWQAQDREVYDRGNGAT
ILLYNLQRRTVLLTRQFRMPAFVNGHSGYLIETAAGLLDNASPEVRIRQE
AQEETGYRVGEVQKVFDAFMSPGSVTERVHFFIGHYQAEDRIDAGGGLEH
EGEDIEVLELDIDQALGMIKSGEIADGKTIMLLQYLQLHVLKPRSLMVLV
AGPYRSGTDDDPALLARNVEAMEHCAAQVLAAGHFPVLGEWVALPMTRLA
GSRAVGDEIYNQRFHAYAERLLERCDAVLRIGGPSAGCDAMVEIGQRLGL
ALYHRVEQLPVVPGGTG
>PFL_5900 nudH, dinucleoside polyphosphate hydrolase
MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDAL
YRELNEEVGLEREDVQILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWF
LLRLISNEQRVRMDLTGKPEFDGWRWVSYWYPLGQVVTFKREVYRRALKE
LAPRLLVRD
>PFL_5108 ogt, methylated-DNA--protein-cysteinemethyltransferase
MSCVFKKMASPVGQLTLVARGAKLAAILWEHERQNRVRLGPLQEAAEHPL
LLETERQLREYFAGTRERFELELDFVGTEFQRQVWQALLTIPFGETRSYS
QIARQIGNPTAVRAVGAANGRNPISIVAPCHRVIGASGSLTGFAGGLEAK
QFLLALEGEETLQLAF
>PFL_0548 parC, DNA topoisomerase IV, A subunit
MSDSLDLSLDGVERRSLADFTENAYLNYSMYVIMDRALPHIGDGLKPVQR
RIVYAMSELGLDADSKHKKSARTVGDVLGKFHPHGDSACYEAMVLMAQPF
SYRYTLVDGQGNWGAPDDPKSFAAMRYTEARLSRYSEVLLSELGQGTADW
GPNFDGTLQEPLVLPARLPNILLNGTTGIAVGMATDVPPHNLREVASACV
RLLDEPKATVEQLCEHIQGPDYPTEAEIITPRADLLKIYETGRGSVRMRA
VYRVEDGDIIVTALPHQVSGAKVLEQIAGQMQAKKLPMVADLRDESDHEN
PCRIVIIPRSNRVDADELMQHLFATTELESTYRVNINIIGLDGKPQLKNL
RALLVEWLEFRVTTVRRRLQFRLDKVERRLHLLDGLLIAYLNLDEVIHII
RTEEHPRAKLIERFALSEIQADYILDTRLRQLARLEEMKLRAEQDELLKE
QAKLQALLNSEAKLKKLVRTELLQDAETYGDDRRSPIVARAEAKALSENE
LMPTEPVTIVLSEKGWVRCAKGHDIDATGLSYKAGDGYKTAAPGRSNQFA
VFIDSTGRSYSVAAHTLPSARGQGEPLTGRLTPPPGATFECVLLPDDDAL
YVIASDAGYGFVVKGEDLQAKNKAGKALLSLPNNAKVLAPRPVADREQNW
LASVTTEGRLLVFKISDLPQLGKGKGNKIIGIPGERVASREEYVTDIAVL
PDGATLVLQAGKRTLSLKADDLEHYKGERGRRGNKLPRGFQRVDALLVEP
LS
>PFL_0545 parE, DNA topoisomerase IV, B subunit
MATPSASSYNADAIEVLSGLDPVRKRPGMYTDTTRPNHLAQEVIDNSVDE
ALAGHAKSIQVILHADHSLEVSDDGRGMPVDIHPEEGVSGIELILTKLHA
GGKFSNKNYQFSGGLHGVGISVVNALSNQVRVRVKRDGNEYQMTFADGYK
ATELEVVGTVGKRNTGTSVYFAPDPKYFDSPKFSVSRLKHVLKAKAVLCP
GLLVSFEDKSSGEKVEWHYEDGLRSYLVDAVSEFERLPAEPFCGSLAGNK
EAVDWALLWLPEGGDSVQESYVNLIPTAQGGTHVNGLRQGLLDAMREFCE
FRNLLPRGLKLAPEDVWERIAFVLSMKMQDAQFSGQTKERLSSREAAAFV
SGVVKDAFSLWLNANPELGMQLAELAISNAGRRLKASKKVERKRITQGPA
LPGKLADCAGQDPMRSELFLVEGDSAGGSAKQARDKEFQAILPLRGKILN
TWEVDGSEVLASQEVHNIAVAIGVDPGAEDMSQLRYGKICILADADSDGL
HIATLLCALFVQHFRPLVDAGHVYVAMPPLYRIDLGKEIYYALDEAERDG
ILDRLVAEKKRGKPQVTRFKGLGEMNPPQLRETTMDPNTRRLVQLTLDDV
EATAEIMDMLLAKKRAGDRKSWLESKGNLAEVLA
>PFL_5147 phrB, deoxyribodipyrimidine photolyase
MQLIWLRSDLRLHDNTALSAAAQRGAAVAVYLLSPEQWLAHDDAPCKIDF
WLRNLQSLSTALGRLNIPLLIRSAATWEQAPQVLLELCRQLQVQMLHFNQ
EYGIHESRRDAAVTRALQHAGISVQGHLDQLLFQPGSVLTKSGGYFQVFS
QFRKVCYSRLHTALPALVKAPGAQLPLSINADPLPQRVEGFPSPTQALRE
LWPAGDDEAQRRLEKFSDEQIHYYQSERDFPAKPGTSQLSPYLAAGVISP
RQCLHAALRGNQGEFESGSPGAVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVKWRHAPEELAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMV
VAMFLTKNLLIDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYF
RIFNPISQSQKFDSEGRFIKHWLPQLAGLNKKDIHNPAAMGGLFGVPGYP
APIVDLSRSRERALAAFKALPARMDAGVSHE
>PFL_0082 polA, DNA polymerase I
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQY
PDSPFAVVFDAKGGTFRDDMYAEYKANRPSMPDDMRVQIEPLHASVIALG
FPLLCVEGVEADDVIGTLARSSAAADRPVVISTGDKDMAQLVDGHITLVN
TMSGSSMDVEGVKEKFGVAPEQIIDYLALMGDSSDNIPGVPGIGPKTASG
LLVGVNGGLKELYEQLDIVPTLPIRGAKTLPAKLEEHKEMAFLSYQLATI
KVDVPLDVGLDDLHLGEPDREKLVELYSLLEFKSWLDELQRDAKRVELSG
AEATPAAVPPQAVEQAPLELQYETILDQERFDAWLEKLKGAKLIAFDTET
TGIDAQQAQLVGLSFSVKAGEAAYVPLTHSYMGAPAQLDRDSVLLALKPL
LEDPKLLKVGQHAKFDMNILANCAIGGDQANGITVRGVAFDTMLESYVLN
STATRHDMDSLAQKYLDHSTVSFQDIAGKGAKQLTFDQIPLEQAGPYAAE
DADVTLRLHQVLFDKLSAIPSLASVLTDIEMPLVPVLARIERQGALVDDK
LLGVQSIELGDKMVALEREAFEIAGEEFNLGSPKQLGSILYDKLGLPVLK
KTAKGQPSTAEEVLAKLAEDDYPLPRVLMQYRSMSKLKSTYTDRLPEQIN
PRTGRIHTSYHQAVASTGRLSSSDPNLQNIPVRTAEGRRIRQAFIAPPGY
KLLAADYSQIELRIMAHLSRDEGLLNAFRNNLDVHTATAAEVFKVELKDV
TSDQRRSAKAINFGLIYGMGAQKLGKDIGVDTKQAKAYIDTYFARYPGVR
EYMDRTRAQAADQGYVETIFGRRLYLPEINSNKPQERAGAERTAINAPMQ
GTAADIIKKAMVAVDNWLASSGLDARVILQVHDELVLEVREDLVDQVREE
IRGHMSGAATLDVPLLVEVGVGNNWDEAH
>PFL_2480 polB, DNA polymerase II
MDVQQGFVLTRHWRDTPAGTQVDFWLATDRGPRQIRLPLQTSVAFVPAAQ
RAQAERLLTDDPDVQLRPLQLRDFHQRPVLGLYCPQHNQLMRLEKTLRRA
GVEVFEADVRPPERYLMERFITAPVSFGGQPGPDGLLLEAQMKPAPNYRP
SLKLVSLDIETSERGELYSIALEGCGQRQVYMLGKARDDDSAVDFDLEFC
ASREQLLERLNQWLAEHDPDAIIGWNLVQFDLRVLHEHARRLAVPLRLGR
GGEEMQWREHGSRTHYFASAAGRLIIDGIEALRSATWSFPSFSLENVAQT
LLGEGKSIDNPYQRMDEINRMFAEDKPALARYNLKDCELVTRIFAKTELL
TFLLERATVTGLPADRSGGSVAAFTHLYMPLMHRQGFVAPNLGELPPQAS
PGGFVMDSRPGLYESVLVLDYKSLYPSIIRSFLIDPVGLVEGLRQPDEQH
SVAGFRGARFSRTRHCLPSIVTRVAEGREVAKREHNAPLSQALKIIMNAF
YGVLGSSGCRFFDPRLASSITLRGHEIMARTRQLIEAQGHQVIYGDTDST
FVWLGGLHDEEQAGLIGRALVAHVNQWWRDHLQQQYGLESALELQFETHY
KRFLMPTIRGAEEGSKKRYAGLVQRADGSQEMVYKGLETVRTDWSPLARE
FQQELYQRIFHRQPYQDYVRDYVQRTLAGQLDDLLIYRKRLRRPLDDYER
NVPPHVRAARLADEYNREQGRPLQYQNGGWISYVITLAGPEPLENRRAAI
DYEHYLTRQLQPVADAILPFVQDDFSTLVGGQMGLF
>PFL_0440 priA, primosomal protein N'
MPDAILRLALPSPLRRLFDYRAPAGVLRAQLHPGMRLRVPFGRREMIGIL
VEVADHSEVPAEKLKPALALLDPTPPLPPALFKLCLWTAQYYQHSLGDTL
SWALPVLLRQGELAEARQERFWSIAPGARLDDPRIARAPRQREALATLAQ
HPHGVPHTLLSKLMLSKDSLDLLLAKDLVQVEVRKHAPGVRHEHWLAQPE
LPLNSEQRAAYEAIRAGFDSYHAFLLAGVTGSGKTEVYLQLIRETLEAGK
QALVLIPEINLGPQTLARFEQRFNARIALLHSAVNDRERLDAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRAR
QENIPIVLGSATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKS
RPLDSGISGPMQQAIGQTLAAGQQVLVFLNRRGFAPTLLCHDCGWMSECQ
RCDARMTVHQRSGELRCHHCGHVERVPRHCPQCGKVDLRPVGAGTERAEE
RLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCILVGTQMLAKGH
HFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLVQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKP
GQAEGFLDEACSEAERLLAEQNLGGIELLGPVPAPMERRAGRYRAQLLLQ
ANARAPLHRLLSSWLLVLEQMPSGRQVRWSLDVDPVDLY
>PFL_6051 radC, DNA repair protein RadC
MSIRDWPAAERPRERLLEQGAISLSDAELLAIFLRTGVAGKSAVDLARHL
LRRFGSLRRLLEADQLTFTRQLGLGPAKYALLQAVLEMARRHLAEKLHRQ
SALENPLVVRDYLKSMLRHEPHEVFGCLFLDTRHRVLTFEVLFQGSIDST
TVYPRQVIKRALAHNAAAVILCHNHPSGICEPSPADRVVTRRLQEALELI
DVRVLDHFIVGEGDPLSMAEYGWI
>PFL_1231 recA, recA protein
MDDNKKKALAAALGQIERQFGKGAVMRMGDHDRQAIPAISTGSLGLDIAL
GIGGLPKGRIVEIYGPESSGKTTLTLSVIAQAQKAGATCAFVDAEHALDP
EYAGKLGVNVDDLLVSQPDTGEQALEITDMLVRSNAVDVIIVDSVAALVP
KAEIEGEMGDMHVGLQARLMSQALRKITGNIKNANCLVIFINQIRMKIGV
MFGSPETTTGGNALKFYASVRLDIRRTGAVKEGDEVVGSETRVKIVKNKV
APPFRQAEFQILYGKGIYLNGEIIDLGVLHGFLEKSGAWYSYQGNKIGQG
KANSAKFLQDNPEIGNALEKQIREKLLTASPDVKANPVKETEDDMADADI
>PFL_0741 recB, exodeoxyribonuclease V, beta subunit
MTAQAPLALAFPLRGSQLIEASAGTGKTFTISALYLRLVLGHGGEAAGFG
RELLPPQILVVTFTDAATKELRERIRTRLAEAARFFRDETSAPDGLIVEL
REQYPVEQWAACANRLDIAAQWMDEAAVSTIHSWCQRMLREHAFDSGSLF
TQTLETDHSDLLGQVLRDYWRLFCYPMQGDALNWVRSHWVGPAELMPRVR
AMFGNERRDPPEQTPSELIEACLQERREALVQIKAPWREWAAQLREICLQ
GVASKSVDGRKMQARFFEPWFEKISAWAEDESVEQLDIGTGFTRLTPEGM
SEAWKGAAPDHPGLDAMAGLKASLDALPSPDAAVLQHAAQWVGARFEEEK
RRRAEMGFDDMLLRLDSALQSDGGERLATLIREQFPVALIDEFQDTDPVQ
YRIFESIYRIEANDPETGLFLIGDPKQAIYAFRGADIYTYLRARQATSGR
LHTLGTNFRSSQAMVSAVNHVFLQAEQRPQGQGAFLFREADGENPVPFLA
VAAQGRKEQLLVDGQPVPALNFWQLPSEQPLSGAQYRQHQAAACATAIVG
LLNGGQQGRSGFVREQQALKGLLPADIAILVRDGKEAQAVRGELAARGVR
SVYLSDKDSVFAAQEARDVLVWLKACAEPDVERPLRAALASLTLNLPLLE
LERLNQDELAWEARVMQFRGYRAIWRSQGVLPMLRRLLHDFQLPQALMAR
SDGERVLTNLLHLSELLQQSAAELDGEQALIRHLAEHLALSGQAGEEQIL
RLESDEQLVKVVTIHKSKGLEYPLVFLPFICSTKPVDGSRLPLHYHDAAG
KPQVSLRPTPELIALADEERLAEDLRLLYVALTRAQHACWLGMADLKRGN
HSSSVLHLSALGYLLGGGDVLGESSALLRWLLDLQQGCAAIGVSELPVVD
DQRYQPPRNEATLLAPLTPSRRAAENWWIASYSALRISDILGAGSTEAPE
NPQAQKLFDDERLDPEAPRETLASGGDIHRFPRGPNPGTFLHGLLEWAGE
EGFAAAPEAIEDAVARRCNRRGWQGWIPTLSDWLQHLLQAPLPLGEGQAP
VVLGQLTQYRVEMEFWFASHKVDVLKLDERVRQQTHQGAPRVTAEPVLLN
GMFKGFIDLTFEHQGRYYVADYKSNWLGADDAAYTEQAMEQSILDNRYDL
QYVLYLLALHRQLKARLADYDYDRHVGGALYLFLRGTRAASQGAYFARPP
RQLIEQLDRMFQGQPEPPKAEPAWEQGVLL
>PFL_0740 recC, exodeoxyribonuclease V, gamma subunit
MVVHGNRLDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAED
PEVDDGGGCGIAAAIDVQLPGSFMWQLYRLVLGRDEIPPKSLLDKAPLTW
RLMRLLPELIDEPHFEPLQRFLTHDSDLRKRYQLAERLADLFDQYQVYRA
DWLEDWAAGRHQLRNGRGETKALTPANCWQAELWRALLLDVGTEGMAQSR
AGVHQRFIERINQLEVAPSGLPSRVIVFGISSLPAQALEALAGLARFSQV
LLCVHNPCRHHWADIVADKDLLRHQYKRQARKAGMPQALDPQTLHQHAHP
LLAAWGKQGRDYINLLDSYDDPNSYRSAFRDGRIDLFSDSQPASMLQQLQ
DDILELRPLNETRELWPQVDIQHDQSIRFHIAHSAQREVEILHDQLLARF
SAEPDLRPRDVIVMVPDIDSYAPHIRAVFGQLERDDRRFIPFTLTDQGQR
GRDPLLIAVEHLLKLPDSRFPVSEILDLLDVPALRARFGVDEADLPTLHR
WIEGAGIRWGMNAEQRAELGLPPELEQNSWRFGLRRMLLGYAVGRSDACD
GIEPYDEIGGLDAALIGPLVALLDALQIAYQQLTQPADPAEWGERLHNLL
EQFFLASNEHDDYLLGQLDDLRENWLETCESVGLQDQLPLTVVREAWLAG
LDQGRLSQRFLAGAVNFCTLMPMRAIPFKLVCLLGMNDGDYPRAQPPLDF
DLMGSDYRPGDRSRREDDRYLLLEALLSARDQLYVSWVGRSIRDNSERPA
SVLIGQLRDHLASGWRLPDEQDSLLEALTQEHPLQPFSARYFHDSDTLFS
YAREWQVLHQVREELGAVERLEPYVQDEPLSLAQLQDFLRNPVRHFFSQR
LKVFFEAMEAPLADEEPFVLDALQRYSLSDSLLEAALGDAAQPEQALQAQ
AQRLQASGLLPMAGFGECLQRELLEPLPDLLQRYRQLLDLWPTPVTSALP
VSLELQGVRLEGWLSSLHQRADGGLLAVSAIPNGIGSTKTRKWHRLIKPW
VNHLLACASGYSLTTALVASDDSLLLPPLEQEVARQILGSLLQAWQAGMR
LPLPVAIKTAFAWLGQSDPDKAAAAARKTYDGDGQNSEGERRQSPALARQ
FADYNALIADETFSGWAETLYRPLLNAPWRSALGEEAGA
>PFL_0742 recD, exodeoxyribonuclease V, alpha subunit
MPLSRAEDLLLLLERWVERGWLRSLDRAFVGFLHELDPGCDPLVLMAAAL
TSHQLGHGHVCLDLFETLKEPDFALSLPPEGDAQNGAPALPSQVLMGLEG
AHWCKVLAGSRLVALAADHAESSRQRPLVLSGKRLYLRRYWAYERRIDNA
LRQRLALAEATPENLATRLDGLFGPAKAAGPVDWQKLACALATRGAFSII
TGGPGTGKTTTVVRLLALLQGPAVEARKPLRIRLAAPTGKAAARLTESIS
LQVRSLAVPDEVREMIPSEVTTVHRLLGNRPGTRHFRHHAGNRLPLDVLV
VDEASMIDLEMMANLLDALPIHARLVLLGDKDQLASVEAGAVLGDLCRDA
EAGWYNPQTRAWLEAVSGENLGASGLQEDSAHQHPLAQQVVMLRHSRRFG
EGSGIGQLARWVNQQQADEARRLLAARSHADLYGLSLKGEQDRALERLLL
EGHGEGPQGYRHYLNVLRSQRPPPGTPLEDRRWTDWARHVLQAFDRFQLL
CAVRKGPWGVEGLNLRITQALFKARLIDSDQQWYEGRPVLMTRNDYGLGL
MNGDIGIALKLPEQEGSEAGRQVLRVAFPRNDGQGGVRLVLPSRLNDVET
VYAMTVHKSQGSEFAHTALILPDALNPVLTKELIYTGITRAKDWFSLIEP
RAGVFEEAVRRKVKRLSGLMLELD
>PFL_0003 recF, DNA replication and repair protein RecF
MSLSRVSVTAVRNLHPVTFSPSPRINLLYGANGSGKTSVLEAIHLLGLAR
SFRSARLLPVIQYEQLACTVFGQVELAQGGHSSLGISRDRQGEFQIRIDG
QNARSAAQLAEILPLQLINPDSFRLLEGAPKIRRQFLDWGVFHVEPRFMS
TWQRLQKALRQRNSWLRHGTLDAASQAAWDRELCQASAEIDEYRRAYIKA
LKPVFERTLGELLQLEGLTLSYYRGWDKDRELSEVLATALHRDQQMGHTQ
AGPQRADLRLRLGGHNAADILSRGQQKLVVCALRIAQGHLVSQARRGQCI
YLVDDLPSELDEQHRRALCRLLEDLRCQVFITCVDHELLREGWQTETPVA
LFHVEQGRITQTHDHRE
>PFL_6071 recG, ATP-dependent DNA helicase RecG
MTELSKVPVTALKGVGESMAEKLAKVGLENLQDVLFHLPLRYQDRTRVVP
IGALRPGQDAVIEGTVSGADVVMGKRRSLLVRLQDGTGGLSLRFYHFSNA
QKDGLKRGTRVRCYGEARPGASGLEIYHPEYRAISGDEPPPVDQTLTPIY
PLTEGLTQQRLRLLCQQSLALLGPRSLPDWLPEELARDYQLAPLDDAIRY
LHHPPADADVDELALGHHWAQHRLAFEELLTHQLSQQRLRDSLRSQRAPV
LPLARKLPVKYLKNLGFAPTGAQQRVGNEIAYDLSQPEPMLRLIQGDVGA
GKTVVAALAALQALEAGYQVALMAPTEILAEQHFITFKRWLEPLGLEVAW
LAGKLKGKARSAALEQIAGGAPMVVGTHALFQDEVQFKNLALVIIDEQHR
FGVQQRLALRQKGVGGRLCPHQLIMTATPIPRTLAMSAYADLDTSILDEL
PPGRTPVNTVLVTDSRRIEVIERVRAACAEGRQAYWVCTLIEESEELTCQ
AAETTFEDLSSALGELRVGLIHGRMKAPEKAAVMAEFKAGNLQLLVATTV
IEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGSAASHCVLLYHPPL
SQIGRQRLGIMRETNDGFVIAEKDLELRGPGEMLGTRQTGLLQFKVADLM
RDADLLPAVRDAAQALLERWPDHVSPLLERWLRHGQQYGQV
>PFL_1120 recJ, single-stranded-DNA-specific exonuclease RecJ
MRIEPRELPAVLPFLGDLPPLLTRLYAARGVQSVEELDKSLARLIPYQQL
KGIDAAVDLLVTALDQRQRILIVGDFDADGATASTVGLLGLRLLGAAHVD
YLVPNRFEYGYGLTPEIVAVALQREPQLLITVDNGISSVEGVAAAKAAGL
QVLVTDHHLPGHELPAADAIVNPNQPGCEFPSKALAGVGVIFYVLMALRA
RLRSLGRYETQPQPNIGELLDLVALGSVADVVPLDANNRILVHQGLERIR
AGRARPGLKAILEVAKRDHSRITSTDLGFILGPRLNAAGRLDDMSLGIEC
LLSDDVSAARAMAAQLDELNQDRKSIEQGMQREALAQLKELPVESMPFGL
CLFDADWHQGVIGILASRLKERYHRPTIAFADAGDGMLKGSARSVPGFHI
RDALDAVAARHPQLISKFGGHAMAAGLSLPEQNFPAFAEAFDEEVRRQLR
EEDLTGRLLSDGTLAVEEFHLELARALRHAGPWGQHFPEPMFHGVFELVE
QRIVGERHLKVVLRSECGSLKLDGIAFGIDREVWPNPTIRWVELAYKLDL
NEFRGQETVQLMIAHIEPR
>PFL_0825 recN, DNA repair protein RecN
MLVHLSVHNYAIVEHLDLELDRGMSVITGETGAGKSIMLDALGLTLGDRA
DSGVVRPGADKADILATFDLADIPEAHAWLAERDLDTDGPCILRRVITAE
GRSRGYINGTPCPLGDLKALGELLIDIHSQHEHQSLLKTDTHRRLLDEYA
GATDLARQVQLAAQRWRQTRLELERLSNSGDEQRARHQLLSYQLEELENL
GLGENELEQLEQEHKNLTNAETLLGICRQVVEQCSESDSGNVLNALTVSL
NRLSSIGNSSGSLGEATNLLASAQIQVEEAVGELNRFLDHFDADPARLQQ
LEERLDAIYTLARKHRIQPFELAAMQQTLLDEIETLDANDESIERLGEEL
QSFARHYQEKAQELSQLRQQAATSLASAVEQEIQRLGMPGGRFTIELRAN
SSDELLPNGLEQVELLVSANPGQPLKALAKVASGGELSRISLAIQVITAQ
TSRVPTLVFDEVDVGIGGPTAEIVGQLLRRLGERGQVLTVTHLPQVAAQG
HQHLFVHKVRGSDATHTAVSKLGKNERVEEVARMLGGIDLTKESLAHAKK
MVVTAKA
>PFL_1073 recO, DNA repair protein RecO
MSSNAPVGQLAYVLHSRAYRESSALVDFLTPQGRLRAVLRNARGKAGTLA
RPFVPLEVEFRGRGELKNVGRMESAGIAAWLNGEALFSGLYLNELLIRLL
PAEDPHPAVFDHYAATLLALAEGRPLEPLLRAFEWRLLDDLGYGFALDSD
IHGAPIAADGLYRLQVDAGLEQVFLLQPGLFNGTELLAMADADWSAPGAL
SAAKRLMRQALAVHLGGRPLVSRELFRKP
>PFL_1579 recQ, ATP-dependent DNA helicase RecQ
MLEQAQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQ
VPALLREGLAVVVSPLIALMDDQVATLEELGVAAAALNSTLSAEQQRDLA
ARIRRGEVKMLYLAPERLVQPRMLAFLQSLEIALFAIDEAHCVSQWGHDF
RPEYLQLGQLAEMFPQVPRIALTATADKRTREEIVNRLHLQDAERFLSSF
DRPNIFYRIVPKEQPRKQLQAFLNERRSDAGIVYCLSRKKVDEVAAFLCE
QGFTALPYHAGLPNELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFV
AHMDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLMLKQMLQNSEGD
ERHKRLEQHKLDAMLALCEETRCRRQTLLAYFDEDMPQPCGHCDNCVDGV
QTWDATEPARQALSAIYRTGQRYGVGHLVDVLLGKDTEKVRSFGHQHLSV
FGVGKARSEGEWRSLFRQLVARGLADIDLEGYGGLRLSDSCRPLLKGEVT
LELRRDLKPQTTPKSSTSQASQLVRGEEREQWEALRALRRKLAEEHGVPP
YVIFPDSTLLEMLRSQPGSMAEMAEVSGVGARKLERYGAAFLEVLGGGVE
APKVVADLRHELITLARAGMTPVQIAGQLQCTEKNVYTLLAEAIGKQQLS
LEQALDLPEDLLGEIQDAFLDGEGELPPVAEVIPVFAGRVPEGVLYCVRA
ALESEFEM
>PFL_1907 recR, recombination protein RecR
MSFSPLIRQLIDALRTLPGVGQKTAQRMALQLLERDRSGGLRLAQALSQA
MEGVGHCRQCRTLTEDELCPQCADPRRDDTLLCVVEGPMDVYAVEQTGYR
GRYFVLKGHLSPLDGLGPEAIGIPQLLARIEEQGSFSEVILATNPTVEGE
ATAHYIAQLLTNKGLITSRIAHGVPLGGELELVDGGTLAHSFAGRKPIAL
>PFL_6031 rep, ATP-dependent DNA helicase Rep
MSRLNPRQQEAVNYVGGPLLVLAGAGSGKTSVITRKIAHLIQNCGIRAQY
IVAMTFTNKAAREMKERVGTLLRSGEGRGLTVSTFHNLGLNIIRKEHVRL
GYKPGFSIFDETDVKALMTDIMQKEYSGDDGVDEIKNMIGSWKNDLILPA
EALENARNPKEQTAAIVYTHYQRTLKAFNAVDFDDLILLPVKLFEEHADI
LEKWQNKVRYLLVDEYQDTNASQYLLVKMLIGKRNQFTVVGDDDQSIYAW
RGARPENLMLLKDDYPSLKVVMLEQNYRSTSRILRCANVLISNNPHEFEK
QLWSEMGHGDEIRVIRCRNEDAEAERVAMEILSLHLRTDRPYSDFAILYR
GNYQAKLIELKLQHHQVPYRLSGGNSFFGRQEVKDLMAYFRLIVNPDDDN
AFLRVINVPRREIGSTTLEKLGNYATERKISMYAATDEIGLGEHLDSRFT
DRLARFKRFMDRVREQCAGEDPISALRSMVMDIDYENWLRTNSSSDKAAD
YRMGNVWFLIEALKNTLEKDEDGEMTVEDAIGKLVLRDMLERQQEEEDGA
EGVQMMTLHASKGLEFPYVFIMGMEEEILPHRSSIEADTIEEERRLAYVG
ITRARQTLAFTFAAKRKQYGEIIDCAPSRFLDELPPDDLAWEGNDDTPTE
VKAVRGNSALADIRAMLKR
>PFL_3297 rnhA, RNase H
MSDSVEIFTDGACKGNPGPGGWGALLVCKGVEKELWGGEANTTNNRMELM
AAIRGLEELKRQCDVQLVTDSQYVMKGINEWMANWKKRGWKTAAKEPVKN
ADLWQQLDEQVNRHNVTWKWVRGHTGHHGNERADQLANRGVDEVRGYKQP
>PFL_1190 rnhB, ribonuclease HII
MTVSNPKMQMGLDFTLVADAEDLVAGVDEVGRGPLCGAVVTAAVILDPTR
PILGLNDSKKLTEARREKLFDEICEKALSWCIARAEVEEIDELNILHATM
LAMQRAVEGLSVTPKLAMIDGNRCPKLAMPAEAVVKGDSKVPAIAAASIL
AKVSRDREMAAFELIYPGYGIGGHKGYPTPVHLEALARLGPTPIHRRSFA
PVRQAYEAREALGEIQS
>PFL_4856 rnt, ribonuclease T
MSDDHFDDEQEGSSGGPRHPMAARFRGYLPVVVDVETGGFNSATDALLEI
AATTIGMDEKGFVFPEHTYFFRVEPFEGANIEAAALEFTGIKLDHPLRMA
VSEETALTDIFRGVRKALKANGCKRAILVGHNSSFDLGFLNAAVARLDMK
RNPFHPFSSFDTATLAGLAYGQTVLAKACQSADIDFDGREAHSARYDTEK
TAELFCGIVNRWKQMGGWQDFDD
>PFL_4764 ruvA, Holliday junction DNA helicase RuvA
MIGRLRGTLAEKQPPHLILDVNGLGYEVEVPMTTLYRLPSVGEPLTLHTH
LVVREDAQLLYGFASKRERDFFRELIRLNGVGPKLALALMSSLEVDELVR
CVQAQDTSALTKVPGVGKKTAERLLVELKDRFKAWEAVPSMFALVPNQPD
APAPVASAESDAVSALISLGYKPQEASKAVSAIKDKGLSSEDMIRRALKG
MI
>PFL_4763 ruvB, Holliday junction DNA helicase RuvB
MIEADRLIAATGPREREEIQDRAIRPVSLADYIGQPSVREQMELFIQAAR
GRNESLDHTLIFGPPGLGKTTLANIIAEEMGVSIKSTSGPVLERPGDLAA
LLTNLEPHDVLFIDEIHRLSPIVEEVLYPAMEDFQLDIMIGEGPAARSIK
LDLPPFTLVGATTRAGMLTNPLRDRFGIVQRLEFYSTADLATIVSRSAGI
LGLPLDPEGAFEVARRARGTPRIANRLLRRVRDFAEVRAKGHITKPIADL
ALNLLDVDERGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIED
VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGLNIPSRMGDMPVVDEFLDAV
DD
>PFL_4765 ruvC, crossover junction endodeoxyribonuclease RuvC
MTLILGIDPGSRITGYGVVRDTGRGCVYVASGCIRTGAGELPDRLQIVYR
GVREVIQTYGPVTMGIEKVFMARNADSALKLGQARGAAIVAGAEEGLEIA
EYTATQVKQAVAGTGGANKEQVQMMVMHLLKLTTKPQIDASDALAIAICH
AHTRSSLLPHGLGTARSRGGRLRL
>PFL_4788 sbcB, exodeoxyribonuclease I
MRLALTAPERLDCGGLSVQEQAVTSLFWYDYETTGINPRCDRPLQVAGIR
TDLALNEIDEPVNLYCQPSDDILPHPMACMITGITPGRLAEQGLGEADFM
TRVHEQLARPGTCGVGYNTLRFDDEMTRYSLYRNFFDPYAREWQGGNSRW
DLIDVVRTAYALRPQGIVWPEEQGQVSLKLERLTAANGIDHGQAHDALSD
VRATIALARLVRDKQPRLYDWLFQLRSKQRVMDQVRLLQPMVHISGRFSA
ARHYIGVVLPLAWHPRNRNALIVCDLHLDPQGLLELDAETLRQRLYTRRE
DLLEGELPVPLKLIHINRCPVVAPLSVLRSEDQQRLHLDMELYQRRAVAL
SEAQEVWRDKLSVIYGPDEFAASDDPEQQLYDGFIGDRDRRLCEQVREAD
PLHLAQQQWPFDDERLPELLFRYRARNFPETLNKAEQERWLVFCQQRLLD
PQLGAPNTLESFRQGLEQSLLSADPMQRQVLDQWQDYVQALTRRLAL
>PFL_2729 sbcC, nuclease SbcCD, C subunit
MKILAIRLKNLASLAGPFEIDFTAEPLASAGLFAITGPTGAGKSTLLDAL
CLALFGAVPRLNNIGRETKVPEVDSEILTSDPRTLLRRGTGSGYAEVDFV
GIDGRRYRARWETNRARDKATGKLQGSRQNLTDLDSEQLLSNQSKSEYKQ
LIEARLGLNFEQFTRAVMLAQSEFSAFLKADDKERSELLEKLTNTAVYSQ
LGRRAYSKSKEAEDAHKELKAQASGISPLEPEARAELEQQLSQAQQQLKE
QQAQLRQLEAQHVWLKELRQWQEARQSAAEQLQAAEQDAQALAPERLRLQ
RLEQLAPQRHQFLRQAELGASLLPLRQQIQQQVEQQGALQQQQERLQQQL
QDAGTPLSQAQEQHSTSAPLLREAFAEQANLERLGQSLAQAEAQRSRAEQ
ASTEGQQGIQQLLEKQRLVGERLERIAGQLAHSVALAPLSDAWNAYRERL
QQLMLIGNRLHQGQAELPALEQRASSAAQQLSEQRTQLELLYSEAGAEPQ
AVAEQIQLLGTLLQDNRKQQRAVEELARLWAQQRELDQRGQALQDRQQAV
AAQREELNKVGLQAKAELVVAEQTLSVTQALLERQRLARSASVEELRAQL
QSDQPCPVCGSVEHPYHQPEALLQSLGRHDENEEASARKTVDSLKEQLNE
LRAQVQGLIAQQKEFLQQQEQLASQMQALAPSLQAHPLSASLLDQDPPKR
DAWLQQQLDQLQQSITQDENRQGALLTLQKDAARLQNQLQAAIDASQQAA
QHLDKQQQQLSADRQRLDEELASFSHLLPAEVLDGLRRDPASTFMQLDQQ
VLQRIEQLREQQEEAEEQQQRQLTLEKEQDRQLTRQQQLAEAQQQFDTLH
QQQQACQHRLAELLGQQPSAEHWQQHLEQTVDQARSAQALAQQQQQALHQ
QAIELGAELKAREERLQALESEQQQLAASIEQWRAGHPELDDAGLQQLLE
LDEEQVQQLRQRLQDNDKAIEQAKVLLQERQQRLEQHQAQHNGNLETEQL
AQALEQLQQQAQASEQQVADLRARQSEDQRRQAANQALNQRLEQAYAQWQ
RWARLSALIGSAEGDKFRKIAQAYNLDLLVHHANAQLRQLVRRYRLKRGG
SMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASMASSTLKIES
LFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIK
VSRQGNGLSTLEVK
>PFL_5552 ssb, single-strand DNA-binding protein
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVE
RTEWHRVSMFGKVAEIAGEYLRKGSQVYIEGKLQTREWEKDGIKRYTTEI
IVDMQGTMQLLGGRPQGDQQGQGGMSNSAPRPQQSRPAPQPQRESRPAPQ
QAAPQPAPDFDSFDDDIPF
>PFL_0015 tag, DNA-3-methyladenine glycosylase I
MPRCFWCSEDPLYMAYHDQEWGVPLRDGQRLFELLLLEGFQAGLSWITVL
KKREHYRQVLFGFDVQRVAQMSDAEIDDLMQDPGIIRNRLKLNAARRNAQ
AWLELEDPVAFLWAFVGGVPKINHFNDRSEVPAVTPEAEAMSRGLRKAGF
TFVGPTICYALMQASGMVMDHTLDCDRYAILADARLE
>PFL_4286 tatD, deoxyribonuclease TatD
MQLIDIGVNLTNPSFAEKHQAVLNRAYEAGVCQLVLTGTSVEGSEQALEL
CQKLDADGQRLFATAGLHPHSASDWNADSPRRLRALLGEPRVRAVGECGL
DFNRDFSPRPQQEKVLEEHLALAVELQLPVFLHERDANLRLLDILRDFRD
RLPAAVVHCFTGEQKALFSYLDLDLHIGITGWICDERRGTHLHPLVRDIP
RGRLMLESDAPYLLPRSLRPKPKNGRNEPAYLTEVLREVALHRGETLEDL
ASHSTACSRAFFRLPEIA
>PFL_1942 topA, DNA topoisomerase I
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASAAKEPA
AKRGKAAAGEAPALSPKEKARKQLVSRMGVDPEHGWKAKYEILPGKEKVI
EELRRLAKDADTIYLATDLDREGEAIAWHLREAIGGDDSRYKRVVFNEIT
KKAIQEAFSQPGELDIDRVNAQQARRFLDRVVGYMVSPLLWAKIARGLSA
GRVQSVAVKLVVEREREIRAFIPEEYWEVHADLGTAKGSNVRFEVARENG
EAFKPLNEAQAMAALEKLKASAYSVAKREDKPTSSKPSAPFITSTLQQAA
SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADAVAMARTYIEDEF
GNKYLPASPNVYSSKEGAQEAHEAIRPSDVNTHPSKLSGMERDAERLYEL
IWRQFVACQMLPAQYLSTTVSVAAGDFELRAKGRILKFDGYTRVMPQMAK
PGDDDVLPEMAQGEVLKLIKLDPSQHFTKPPARYSEASLVKEMEKRGIGR
PSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESFSNLMDYGFT
AGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAEGAESGMRANQPVMT
DIPCQTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAAD
DEGESESLVLRGKHRCPICSTAMDAYLLDEKRKLHICGNNPDCAGYEIEE
GSYRIKGYEGPSLECDKCGSEMQLKTGRFGKFFGCTNPTCKNTRKLLKSG
DAAPPKMDPVKMPELKCEKVNDTYILRDGASGLFLAASQFPKNRETRAPL
VLELIPHKDEIDPKYHFLCEAPQKDPDGRPAVVRYSRKTKEQYVQTEVDG
KPTGWRAFYDGGKWKVEDKR
>PFL_4672 topA, DNA topoisomerase I
MKLMIIEAPGKLKKLAPMLKKLRPGEHWEVVASGGHIRDLPEKGHDDTMI
IAGVLKDLRPVYTIRDKSSGRIKTMREALARATEIYIATDPDREGESIAW
HIQQTLRIRDYKRIAFNEVTHTRVKEALANPRKIDAQLVASQECRRVLDR
LVGYLVTGELRRVLGLPTTAGRVQSVAVYLVVLREREIRDFKVVHHFGVR
LQFQNQTTGSSWTADWVTVPDFTSKEHPYVQDGTLAAQVAGVRNVIVESC
EDTKERRAPYPPYISSTLQQAASVALKWDPDKTMQIAQRLYEQGVITYHR
TDNPNVGDDVMGDIRAVAQALGIPAVEKRREFRAAEGAQLGHPAIAPTTW
ADEVAGEDDEQRQLYKLIRIRALASQLADAIYDARIVKLLAKGPDQRPLR
FSGSCRTVAYRGWMQLLAGDDTDEEGAEAANNEIPKLEPKQILPVLNGQV
LNQKTKAPPRYTKASLVKELERQGIGRPGTFASIIKNITSRSQVIEEKRK
LIPGPLGEQTIAQLEGRFSFVQTQFTSSMERALDKIADGQSTYNAVVSKF
YEHLQRELSSLKDAPSLRMQSARTSASTTTGPEHQYLCGKCGKHLVRRQK
RGEGGYDFWACSGYKDTGCKVSYPSVKEKPDLTKARGL
>PFL_1435 ung, uracil-DNA glycosylase
MTADDRIKLEPSWKEALRAEFDQPYMSELREFLRQEHAAGKEIYPPGPMI
FNALNSTPLDKVKVVILGQDPYHGPGQAHGLCFSVQPGVPAPPSLVNIYK
ELKRDLNIDIPNHGYLQSWAEQGVLMLNTTMTVERANAASHAGKGWQFFT
DRIIEVVSEHQPHLVFLLWGAHAQSKQKLIDATKHLVLTSVHPSPLSAYR
GFLGCGHFSRTNKYLEQNGETPIEWRLPPL
>PFL_5554 uvrA, UvrABC system, A protein
MDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGT
ITEIYDYLRLLYARVGTPRCPDHDIPLEAQTVSQMVDLVLAQPEGSKLIL
LAPVIRERKGEHLSVFEELRAQGFVRARVNGKLFELDELPKLDKQKKHSI
DVVVDRFKVRADLQQRLAESFETALKLADGIALVAPMDDEPGEEMIFSAR
FACPICGHAISELEPKLFSFNNPAGACPTCDGLGVKQFFDIKRLVNGELT
LAEGAIRGWDRRNVYYFQMLGSLASHYGFSLEVPFNQLPADQQKVILHGS
GTQNVDFKYLNDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFL
STQPCPDCRGTRLRREARHVWVGEKTLPAVTSLPIGDATDYFGTLKLTGR
RGEIADKILKEIRERLQFLVNVGLDYLTLDRSADTLSGGEAQRIRLASQI
GAGLVGVMYILDEPSIGLHQRDNDRLLGTLKHLRDIGNTVIVVEHDEDAI
RLADYVVDIGPGAGVHGGRIVAEGTAAEVMAHPDSLTGKYLSGRVKIVVP
AKRTPRNKKLSLTLKGARGNNLRNVDLEIPIGLLTCVTGVSGSGKSTLIN
NTLFPLSATALNGATTLEAAPHDSINGLQHLDKVVDIDQSPIGRTPRSNP
ATYTGLFTPIRELFAGVPESRSRGYGPGRFSFNVKGGRCEACQGDGLIKV
EMHFLPDIYVPCDVCKSKRYNRETLEIKYKGKSIHEVLEMTIEEAREFFD
PVPALARKLQTLMDVGLSYIKLGQSATTLSGGEAQRVKLSRELSKRDTGK
TLYILDEPTTGLHFADIQQLLDVLHRLRDHGNTVVVIEHNLDVIKTADWL
VDLGPEGGSKGGQIIAVGTPEQVAEMPQSHTGHYLKPLLTRDRA
>PFL_3691 uvrA, UvrABC system, A protein
MTASRSPSDASQASPSSFPASGFVRVRGAREHNLKNVDVDIPRDALVVFS
GVSGSGKSSLAFSTLYAEAQRRYFESVAPYARRLIDQVGVPDVDRIDGLP
PAVALQQQRGTPSTRSSVGSVTTLSSLVRMLYSRAGSYPPGQPMLYAEDF
SPNTPQGACPECHGLGRVYEVDEASMVPDPSLTIRQRAVASWPLAWQGQN
LRDILVTLGYDVDIPWQQLPKKQRDWILFTEETPTVPVYAGLTPEQTREA
LKRKQEPSYMGTFSGARRYVLHTFTHTQSALMKKRVSQFMRGSPCPLCEG
KRLKREALAVTFAGLDIGELARLPLLQLAEVLRPVAAADYLEQAPADDPV
LSHAQTRAARQQRHAQGAPEHRGAPDVRHTPNLSLEKRLAAQRIAQDLLE
RVSTLTDLGLGYLALERSTPSLSSGELQRLRLATQLGSQLFGVIYVLDEP
SAGLHPADAEALFEALQRLKAAGNSLFVVEHDVQTMRRADWLVDVGPAAG
ERGGQVLYSGPPAGLAEVAQSQTRAYLFPEQAPARRTPRPPRGWLRLEGI
SRNNLKELDAEFPLGCFTAVTGVSGSGKSSLVSQALLELVGAHLGKASAS
DEAPELDLADDAPVSSGGRVVAGMEQIKRLVQVDQKPIGRTPRSNLATYT
GLFDQVRKLFAATDEARERGFDAGQFSFNVAKGRCPACEGEGFVSVELLF
MPSVFAPCPTCHGARYNPQTLAVTWQGLNIAQVLQLSVEQALPVFSEQPG
IRRALEVLRDIGLDYLRLGQPATELSGGEAQRIKLATELQRTARGATLYV
LDEPTTGLHPRDVDRLLEQLDKLVAAGHSLVVVEHEMRVVAQADWVIDIG
PGAGDQGGTLVACGTPHQVAKQRTSRTAPFLAQALGGR
>PFL_2046 uvrB, UvrABC system, B protein
MSEFQLVTRFQPAGDQPEAIRLMVEGIEAGLAHQTLLGVTGSGKTFSIAN
VIAQVQRPTLVLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAY
VPSSDTFIEKDASINDHIEQMRLSATKALLERKDAIIVTTVSCIYGLGSP
ETYLKMVLHVDRGDKLDQRALLRRLADLQYTRNDMDFARATFRVRGDVID
IYPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKLPRFTFYPKSHYVT
PRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAAPPTLYDYLPADALLVIDESHVSVPQVGAMY
KGDRSRKETLVEYGFRLPSALDNRPMRFDEWEGVSPQTIFVSATPGNYEA
EHAGRVVEQVVRPTGLVDPQVEVRPALTQVDDLLSEITKRVAVEERVLVT
TLTKRMAEDLTDYLADHGVRVRYLHSDIDTVERVEIIRDLRLGTFDVLVG
INLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGRAIL
YADRITGSMERAIGETERRRDKQIAFNLANGITPKGVVKDVADIMEGATV
PGSRSKKRKGMAKAAEENARYENELRSPSEITKRIRQLEEKMYQLARDLE
FEAAAQMRDEITKLRERLLTV
>PFL_3562 uvrC, UvrABC system, C protein
MTEQFDPSAFLSTCSGRPGVYRMFDSDARLLYVGKAKNLKNRLSSYFRKT
GQAPKTAALVARIAQIETTITANETEALLLEQTLIKEWRPPYNILLRDDK
SYPYVFLSDGDFPRFSIHRGAKKQKGKYFGPYPSAGAIRESLSLLQKTFM
VRQCEDSYYKNRTRPCLQYQIKRCKAPCVGLVEPEVYAEDVRHSVMFLEG
RSNALTDELSTAMEAAASTLDFEKAAELRDQISLLRRVQDQQSMEGGTGD
VDVVAAFVNPGGACVHLISVRGGRVLGSKNFFPQVGIEEDVAEVMSAFLG
QYFVSSPERDLPSELIVNVVHEDFPTLIAAIDELRGRELTISHRVRGTRA
RWQQLAVTNAEQALSARLANRQHVAARFEALAEVLNLDEPPQRLECYDIS
HSSGEATVASCVVFGPEGPLKSDYRRYNIEGVTAGDDYAAMHQALTRRFS
KLKDGEGKLPDILLVDGGKGQLSMARDVLNELAVPDLILLGVAKGATRKA
GFETLYLNDAAHEFTLKGDSPALHLIQQIRDEAHRFAITGHRARRGKTRR
TSTLEGVAGVGPKRRRDLLKHFGGLQELSRASIDEIAKAPGISKKLAELI
YANLHSE
>PFL_6162 uvrD, DNA helicase II
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQ
VENASPHSILSVTFTNKAAAEMRHRIEQLLGINPAGMWVGTFHGLAHRLL
RAHWQEAGLSQTFQILDSDDQQRLVKRVIRELGLDEQRWPARQAQWFING
QKDEGLRPQHIQASGDLFLATMRGIYEAYEAACQRAGVIDFSELLLRALD
LWRDHPGLLAHYQKRFRHVLVDEFQDTNAVQYAWLRLLAQGGDSLMVVGD
DDQSIYGWRGAKIENIHQYSADFPDTEVIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGDGEAINLYAAFNEHDEARYVVETIESALKTGLARS
DIAILYRSNAQSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLL
EGRGNDAALERVINVPARGIGEKTVEAIREHARHSDVSMWEAMRQLVANK
GLTGRAAGALGAFIELIENLAAKTLEMPLHLMTQTVIEQSGLIAYHEAEK
GEKGQARVENLEELVSAARNFENTEEDEDLTPLAAFLGHASLEAGDTQAD
EHEDSVQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSN
SVSRPFGGGQSQSTSSLFGGSEIPDTGLSLGQAVRHSVFGDGVILNFEGA
GAQARVQVNFSEGSKWLMLGYAKLEAI
>PFL_6015 xerC, tyrosine recombinase XerC
MQQQLDAYCAHLRSERQVSPHTLQAYRRDLEKVLGFCEKMQVRSWTDLDI
QGLRSLIARLHQQGQSSRSLARLLSAVRGLYHYLNREGLCTHDPANGLAP
PKGERRLPKTLDTDRTLQLLDGAVEDDFLAHRDQAILELFYSCGLRLSEL
TSLNLDQLDLADGLVQVHGKGSKTRVLPVGKKARSALEQWLPLRALSNPP
DGALFVSQKGRRLGPRAIQLRVKAAGERELGQNLHPHMLRHSFASHLLES
SQDLRAVQELLGHSDIKTTQIYTHLDFQHLAAVYDSAHPRAKRNKGGE
>PFL_1101 xerD, tyrosine recombinase XerD
MPAIDHPLIDRFLDALWLEKGLSDNTRDAYRSDLALFNGWLQEQGLELPR
AGRELILDHLAWRVEQAYKPRSTARFLSGVRGFYRYLLREKLIEIDPTLQ
IDMPQLGRPLPKSLSEADVEALLAAPDLSEAIGQRDRAMLEVLYACGLRV
TELISLTLEQVNLRQGVLRVMGKGSKERLVPMGEEAIVWVERYMRDARAE
LLGGRPSDVLFPSLRGEQMTRQTFWHRIKHQAKVAGIGKALSPHTLRHAF
ATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHAKHHPRG
>PFL_4944 xseA, exodeoxyribonuclease VII, large subunit
MIKDPFARLGLDREVLTVTQLNGRARVLLEDVFSNIWVEGEISNLARPAS
GHVYFTLKDSGAQVRCALFRQNAARVRQALKDGLAVKVRGKVSLFEGRGD
YQLILDTVEPAGDGALRLAFDALKDKLSAEGLFSAERKVPLPAHPQRIGI
ISSPTGAVIRDIISVFRRRAPQVVLTLIPTAVQGREATAQIVRALQLADA
RGFDALILARGGGSLEDLWCFNEEAVARAVDACVTPIVSAVGHETDVSIS
DFVADVRAPTPSAAAELLAPDSSDLQRRVDNLHRRLVMRMRDRLVRDRLR
LDGLARRLRHPGERLRQQAQRLDDLDMRLRRAFERSLNTRRERLIRLETR
LGAQHPGRQLALLRQRLDSLAERLPRAMREGLKGRRLQLHSQMQTLHVVS
PLATLGRGYSILLDDRGQAIRSAGQTRPGQRLSARLGEGELQVRVEDNHL
TPVTLSLLD
>PFL_5508 xseB, exodeoxyribonuclease VII, small subunit
MARKKAALDFEQSLADLQTLVERLENGELSLEDSLTAFEQGIGLTRDCQA
ALAQAEQKVQILLERDGELAEQPFDAEQPE
>PFL_3928 xth, exodeoxyribonuclease III
MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVADEQFPLADIQAL
GYHVHYHGQKGHYGVALLSRQAPLALHKGFEGDDEDAQRRFIWGTFADAN
GTPVTIMNGYFPQGESRDHPTKFPAKERFYQDLQHLLESRFSNDQPLVVM
GDVNISPEDCDIGIGAENAKRWLKTGKCSFLPEEREWMARLKNWGLVDSF
RHLNPEVNDRFSWFDYRSRGFEDEPKRGLRIDLIMASQGLLPRVKDAGVD
YELRGMEKPSDHAPIWLELG