Gene list
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COG category: Replication, recombination and repair
Organism: Pseudomonas syringae pv. syringae B728a, B728a
Number of genes found: 215
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| Pseudomonas syringae pv. syringae B728a, B728a | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | Psyr_2846 | Phage integrase:Phage integrase, N-terminal SAM-like | SubName: Full=Phage integrase:Phage integrase, N-terminal SAM-like protein; | chromosome | CDS | 3419554 | 1035 | + | 0.560386 |
| NA | Psyr_0185 | Phage integrase:Phage integrase, N-terminal SAM-like | RecName: Full=Tyrosine recombinase XerC; | chromosome | CDS | 197894 | 900 | + | 0.622222 |
| NA | Psyr_0683 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 786913 | 405 | + | 0.54321 |
| NA | Psyr_0516 | Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal | SubName: Full=ATP-dependent RNA helicase DbpA; EC=5.99.1.-; | chromosome | CDS | 572766 | 1422 | - | 0.614627 |
| NA | Psyr_1653 | DNA polymerase III delta prime subunit | SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7; | chromosome | CDS | 1857645 | 987 | + | 0.616008 |
| NA | Psyr_4379 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 5235551 | 546 | + | 0.611722 |
| NA | Psyr_2654 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; Flags: Precursor; | chromosome | CDS | 3224856 | 807 | + | 0.539033 |
| NA | Psyr_4020 | Exodeoxyribonuclease I | RecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; | chromosome | CDS | 4787147 | 1431 | - | 0.579315 |
| NA | Psyr_1825 | DNA-directed DNA polymerase | SubName: Full=DNA polymerase III, tau subunit; EC=2.7.7.7; | chromosome | CDS | 2105845 | 2211 | + | 0.644957 |
| NA | Psyr_1090 | DNA polymerase III chi subunit, HolC | SubName: Full=DNA polymerase III, chi subunit; EC=2.7.7.7; | chromosome | CDS | 1232170 | 429 | - | 0.617716 |
| NA | Psyr_2668 | Helix-turn-helix, Fis-type | SubName: Full=Helix-turn-helix, Fis-type; | chromosome | CDS | 3239928 | 615 | + | 0.606504 |
| NA | Psyr_2914 | ATP-dependent DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase RecQ; | chromosome | CDS | 3497794 | 4422 | - | 0.545455 |
| NA | Psyr_1475 | Phage integrase:Phage integrase, N-terminal SAM-like | SubName: Full=Phage integrase:Phage integrase, N-terminal SAM-like protein; | chromosome | CDS | 1663795 | 963 | + | 0.586708 |
| NA | Psyr_0554 | Gram negative topoisomerase IV, subunit A | RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; | chromosome | CDS | 625908 | 2256 | + | 0.608156 |
| NA | Psyr_0215 | Exodeoxyribonuclease III xth | SubName: Full=Exodeoxyribonuclease III xth; | chromosome | CDS | 228597 | 780 | - | 0.592308 |
| NA | Psyr_0106 | Transposase IS3/IS911 | SubName: Full=Transposase IS3/IS911; | chromosome | CDS | 117869 | 300 | - | 0.57 |
| NA | Psyr_1480 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1669524 | 603 | - | 0.515755 |
| NA | Psyr_1588 | Putative exonuclease, RdgC | RecName: Full=Recombination-associated protein RdgC; | chromosome | CDS | 1787124 | 921 | - | 0.605863 |
| NA | Psyr_1177 | ISPsy9, transposase OrfA | SubName: Full=ISPsy9, transposase OrfA; | chromosome | CDS | 1331164 | 540 | - | 0.525926 |
| NA | Psyr_3804 | ATP-dependent DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase, RecQ-like protein; EC=3.6.1.-; SubName: Full=Uncharacterized protein; | chromosome | CDS | 4522205 | 2097 | + | 0.528851 |
| NA | Psyr_3811 | Transposase IS3/IS911 | SubName: Full=Transposase IS3/IS911; | chromosome | CDS | 4532460 | 300 | - | 0.57 |
| NA | Psyr_0201 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; | chromosome | CDS | 215460 | 2076 | - | 0.637283 |
| NA | Psyr_2382 | conservedhypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2761385 | 432 | + | 0.541667 |
| NA | Psyr_1433 | C-5 cytosine-specific DNA methylase | SubName: Full=C-5 cytosine-specific DNA methylase; | chromosome | CDS | 1621535 | 1416 | - | 0.536017 |
| NA | Psyr_4607 | Helix-turn-helix, Fis-type | SubName: Full=Helix-turn-helix, Fis-type; | chromosome | CDS | 5465113 | 300 | + | 0.53 |
| NA | Psyr_4405 | Helix-turn-helix, Fis-type | SubName: Full=DNA-binding protein Fis; | chromosome | CDS | 5267317 | 321 | + | 0.551402 |
| NA | Psyr_3738 | ATP-dependent DNA helicase RecQ:ATP-requiring DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase RecQ; EC=3.6.1.-; | chromosome | CDS | 4452018 | 2130 | - | 0.62723 |
| NA | Psyr_4680 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 5547340 | 837 | + | 0.506571 |
| NA | Psyr_3856 | Helicase c2 | SubName: Full=Helicase c2; | chromosome | CDS | 4595497 | 2145 | - | 0.638695 |
| NA | Psyr_5027 | Histone-like bacterial DNA-binding protein | SubName: Full=Bacterial nucleoid protein HU alpha subunit; | chromosome | CDS | 5967367 | 276 | - | 0.543478 |
| NA | Psyr_4131 | Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902 | SubName: Full=Transposase, IS111A/IS1328/IS1533:Transposase IS116/IS110/IS902; | chromosome | CDS | 4921241 | 930 | - | 0.576344 |
| NA | Psyr_1226 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1384596 | 354 | - | 0.612994 |
| NA | Psyr_2843 | C-5 cytosine-specific DNA methylase | SubName: Full=C-5 cytosine-specific DNA methylase; | chromosome | CDS | 3415442 | 2133 | + | 0.627754 |
| NA | Psyr_0987 | Helix-turn-helix, Fis-type | SubName: Full=Helix-turn-helix, Fis-type; | chromosome | CDS | 1117825 | 300 | + | 0.53 |
| NA | Psyr_4114 | Protein of unknown function UPF0102 | RecName: Full=UPF0102 protein Psyr_4114; | chromosome | CDS | 4905592 | 372 | + | 0.577957 |
| NA | Psyr_1894 | SNF2-related:Helicase, C-terminal:SWIM Zn-finger | SubName: Full=SNF2-related:Helicase, C-terminal:SWIM Zn-finger; | chromosome | CDS | 2163618 | 2745 | - | 0.616758 |
| NA | Psyr_4707 | Protein of unknown function DUF1568 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5577665 | 459 | - | 0.529412 |
| NA | Psyr_4320 | ATP-dependent helicase HrpB | SubName: Full=ATP-dependent helicase HrpB; | chromosome | CDS | 5170887 | 2535 | - | 0.644181 |
| NA | Psyr_2976 | Phage integrase:Phage integrase, N-terminal SAM-like | SubName: Full=Phage integrase:Phage integrase, N-terminal SAM-like protein; | chromosome | CDS | 3568468 | 960 | - | 0.620833 |
| NA | Psyr_2605 | transposase, putative | SubName: Full=Transposase, putative; | chromosome | CDS | 3059276 | 498 | + | 0.578313 |
| NA | Psyr_4077 | Methylated-DNA-[protein]-cysteineS-methyltransfe rase | SubName: Full=Methylated-DNA-[protein]-cysteine S-methyltransferase; | chromosome | CDS | 4860519 | 357 | + | 0.630252 |
| NA | Psyr_0001 | chromosomal replication initiator protein, DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 1 | 1536 | + | 0.58138 |
| NA | Psyr_1508 | Phage integrase:Phage integrase, N-terminal SAM-like | SubName: Full=Phage integrase:Phage integrase, N-terminal SAM-like protein; | chromosome | CDS | 1694121 | 960 | + | 0.614583 |
| NA | Psyr_1463 | DEAD/DEAH box helicase | SubName: Full=DEAD/DEAH box helicase; | chromosome | CDS | 1649828 | 2259 | - | 0.573705 |
| NA | Psyr_2521 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2929599 | 624 | + | 0.677885 |
| NA | Psyr_0289 | Radical SAM | SubName: Full=Radical SAM; | chromosome | CDS | 307483 | 1059 | - | 0.611898 |
| NA | Psyr_0682 | Exodeoxyribonuclease V, alpha subunit | SubName: Full=DNA helicase/exodeoxyribonuclease V, alpha subunit; EC=3.1.11.5; | chromosome | CDS | 784699 | 2094 | + | 0.643266 |
| NA | Psyr_1286 | Phage integrase:Phage integrase, N-terminal SAM-like | RecName: Full=Tyrosine recombinase XerD; | chromosome | CDS | 1451032 | 897 | + | 0.622074 |
| NA | Psyr_4421 | Protein of unknown function DUF1568 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5286657 | 459 | - | 0.501089 |
| NA | Psyr_4761 | Formamidopyrimidine-DNA glycolase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome | CDS | 5636162 | 813 | - | 0.632226 |
| NA | Psyr_3316 | ISPsy8, transposase OrfA | SubName: Full=ISPsy8, transposase OrfA; | chromosome | CDS | 3968246 | 516 | + | 0.534884 |
| NA | Psyr_1885 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2155794 | 159 | + | 0.528302 |
| NA | Psyr_1409 | DNA recombination protein, RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 1595560 | 609 | + | 0.599343 |
| NA | Psyr_2101 | Protein kinase | SubName: Full=Protein kinase; | chromosome | CDS | 2450832 | 1662 | - | 0.640193 |
| NA | Psyr_0526 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 587936 | 1446 | + | 0.621715 |
| NA | Psyr_0547 | Conserved hypothetical protein 52 | SubName: Full=Uncharacterized protein; | chromosome | CDS | 619676 | 648 | + | 0.567901 |
| NA | Psyr_3317 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; Flags: Precursor; | chromosome | CDS | 3968791 | 807 | + | 0.539033 |
| NA | Psyr_0270 | DNA polymerase A | SubName: Full=DNA polymerase I; EC=2.7.7.7; | chromosome | CDS | 287690 | 2766 | - | 0.618944 |
| NA | Psyr_0458 | Helicase, C-terminal:Type III restriction enzyme, res subunit:DEAD/DEAH box helicase, N-terminal | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome | CDS | 494944 | 1890 | - | 0.643386 |
| NA | Psyr_0398 | Primosomal protein n | SubName: Full=Replication restart DNA helicase PriA; | chromosome | CDS | 425511 | 2220 | - | 0.653153 |
| NA | Psyr_3831 | ATP-dependent helicase HrpA | SubName: Full=ATP-dependent helicase HrpA; | chromosome | CDS | 4564908 | 3912 | - | 0.628834 |
| NA | Psyr_1425 | DNA-directed DNA polymerase | SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 1612927 | 1281 | + | 0.556596 |
| NA | Psyr_3704 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4391047 | 672 | + | 0.595238 |
| NA | Psyr_3873 | ATP-dependent DNA ligase:ATP-dependent DNA ligase | SubName: Full=ATP-dependent DNA ligase:ATP-dependent DNA ligase; | chromosome | CDS | 4613364 | 1704 | + | 0.633216 |
| NA | Psyr_4646 | Phage integrase:Phage integrase, N-terminal SAM-like | SubName: Full=Phage integrase:Phage integrase, N-terminal SAM-like protein; | chromosome | CDS | 5509622 | 954 | + | 0.597484 |
| NA | Psyr_3712 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4398981 | 534 | - | 0.526217 |
| NA | Psyr_3842 | SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome | CDS | 4577266 | 2847 | + | 0.623815 |
| NA | Psyr_1084 | Histone-like bacterial DNA-binding protein | SubName: Full=Histone-like bacterial DNA-binding protein; | chromosome | CDS | 1225706 | 282 | + | 0.514184 |
| NA | Psyr_0592 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 680557 | 837 | - | 0.506571 |
| NA | Psyr_2640 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 3207940 | 447 | + | 0.52349 |
| NA | Psyr_4370 | methylpurine-DNA glycosylase family protein | RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; | chromosome | CDS | 5223636 | 672 | + | 0.625 |
| NA | Psyr_3245 | ATP-dependent DNA ligase:ATP-dependent DNA ligase | SubName: Full=ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; | chromosome | CDS | 3886134 | 2601 | - | 0.623222 |
| NA | Psyr_1976 | ISPsy8, transposase OrfA | SubName: Full=ISPsy8, transposase OrfA; | chromosome | CDS | 2293422 | 516 | - | 0.52907 |
| NA | Psyr_0988 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 1118184 | 783 | + | 0.551724 |
| NA | Psyr_4754 | Conserved hypothetical protein 95 | RecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; | chromosome | CDS | 5631047 | 591 | + | 0.663283 |
| NA | Psyr_2666 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 3236226 | 528 | - | 0.517045 |
| NA | Psyr_3970 | Uracil-DNA glycosylase | RecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; | chromosome | CDS | 4718010 | 693 | - | 0.588745 |
| NA | Psyr_0222 | DNA repair protein RadC | RecName: Full=UPF0758 protein Psyr_0222; | chromosome | CDS | 236452 | 675 | + | 0.604444 |
| NA | Psyr_3287 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome | CDS | 3932531 | 2613 | - | 0.603138 |
| NA | Psyr_3647 | DNA gyrase, subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 4330537 | 2778 | - | 0.607991 |
| NA | Psyr_4703 | Exonuclease | SubName: Full=Exonuclease; | chromosome | CDS | 5573947 | 714 | + | 0.612045 |
| NA | Psyr_4019 | transcriptional regulator, putative | SubName: Full=H-NS family protein MvaT; | chromosome | CDS | 4786693 | 381 | + | 0.548556 |
| NA | Psyr_0096 | Transposase, IS4 | SubName: Full=Transposase, IS4 family; | chromosome | CDS | 106580 | 984 | - | 0.557927 |
| NA | Psyr_3809 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4529589 | 1851 | + | 0.427337 |
| NA | Psyr_2148 | Deoxyribonuclease I | SubName: Full=Deoxyribonuclease I; EC=3.1.21.1; Flags: Precursor; | chromosome | CDS | 2505150 | 702 | - | 0.578348 |
| NA | Psyr_1522 | Single-strand binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 1712925 | 465 | - | 0.526882 |
| NA | Psyr_4640 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 5500196 | 1956 | + | 0.596626 |
| NA | Psyr_3189 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 3819057 | 447 | + | 0.608501 |
| NA | Psyr_4859 | ISPsy8, transposase OrfA | SubName: Full=ISPsy8, transposase OrfA; | chromosome | CDS | 5767398 | 516 | + | 0.531008 |
| NA | Psyr_0883 | S-type Pyocin | SubName: Full=S-type Pyocin; | chromosome | CDS | 1005013 | 2037 | - | 0.531173 |
| NA | Psyr_2896 | Excinuclease ABC, C subunit | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 3474485 | 1824 | - | 0.614035 |
| NA | Psyr_0593 | ISPsy9, transposase OrfA | SubName: Full=ISPsy9, transposase OrfA; | chromosome | CDS | 681393 | 540 | - | 0.525926 |
| NA | Psyr_3365 | Methylated-DNA-[protein]-cysteineS-methyltransfe rase | SubName: Full=Transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase; EC=2.1.1.63; | chromosome | CDS | 4023774 | 1155 | - | 0.615584 |
| NA | Psyr_4796 | DNA ligase (NAD+) | RecName: Full=DNA ligase B; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)] B; | chromosome | CDS | 5685673 | 1686 | + | 0.623962 |
| NA | Psyr_2453 | NUDIX hydrolase | RecName: Full=NADH pyrophosphatase; EC=3.6.1.22; | chromosome | CDS | 2841626 | 837 | + | 0.617682 |
| NA | Psyr_0075 | ATP-dependent DNA helicase RepA | SubName: Full=ATP-dependent DNA helicase Rep; EC=3.6.1.-; | chromosome | CDS | 79502 | 2010 | + | 0.605473 |
| NA | Psyr_0524 | Lipopolysaccharide kinase | SubName: Full=Lipopolysaccharide kinase; | chromosome | CDS | 586426 | 735 | + | 0.587755 |
| NA | Psyr_1408 | Crossover junction endodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 1594950 | 525 | + | 0.609524 |
| NA | Psyr_0651 | Helix-turn-helix, Fis-type | SubName: Full=Helix-turn-helix, Fis-type; | chromosome | CDS | 739648 | 300 | + | 0.53 |
| NA | Psyr_0013 | DNA-3-methyladenine glycosylase I | SubName: Full=DNA-3-methyladenine glycosylase I; EC=3.2.2.20; | chromosome | CDS | 14995 | 552 | + | 0.601449 |
| NA | Psyr_0002 | DNA polymerase III, beta chain | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 1575 | 1104 | + | 0.576993 |
| NA | Psyr_3949 | Recombination protein O, RecO | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome | CDS | 4697047 | 684 | - | 0.638889 |
| NA | Psyr_3027 | Protein kinase:Leucine-rich repeat | SubName: Full=Protein kinase:Leucine-rich repeat protein; | chromosome | CDS | 3624696 | 1305 | + | 0.63295 |
| NA | Psyr_1974 | Excinuclease ABC, B subunit | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 2290405 | 2016 | + | 0.608135 |
| NA | Psyr_3686 | DnaA family protein | SubName: Full=Regulatory inactivation of DnaA Hda protein; | chromosome | CDS | 4372196 | 786 | - | 0.601781 |
| NA | Psyr_4901 | A/G-specific adenine glycosylase MutY | SubName: Full=A/G-specific DNA-adenine glycosylase; EC=3.2.2.-; | chromosome | CDS | 5814937 | 1068 | + | 0.639513 |
| NA | Psyr_4679 | ISPsy9, transposase OrfA | SubName: Full=ISPsy9, transposase OrfA; | chromosome | CDS | 5546801 | 540 | + | 0.525926 |
| NA | Psyr_2511 | UvrD/REP helicase | SubName: Full=UvrD/REP helicase; | chromosome | CDS | 2919741 | 2394 | + | 0.600668 |
| NA | Psyr_0751 | ISPs1, transposase OrfB | SubName: Full=ISPs1, transposase OrfB; | chromosome | CDS | 854901 | 306 | + | 0.535948 |
| NA | Psyr_1763 | RNase H | RecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; | chromosome | CDS | 2004697 | 453 | + | 0.611479 |
| NA | Psyr_0551 | Gram negative topoisomerase IV, subunit B | RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; Flags: Precursor; | chromosome | CDS | 622501 | 1905 | + | 0.621522 |
| NA | Psyr_0736 | umuC protein | SubName: Full=UmuC protein; | chromosome | CDS | 840908 | 246 | + | 0.51626 |
| NA | Psyr_4297 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal | SubName: Full=Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; | chromosome | CDS | 5123836 | 1329 | - | 0.62152 |
| NA | Psyr_1934 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2207057 | 636 | + | 0.444969 |
| NA | Psyr_3635 | Competence protein ComEA helix-hairpin-helix region | SubName: Full=Competence protein ComEA helix-hairpin-helix region; Flags: Precursor; | chromosome | CDS | 4316446 | 363 | - | 0.561983 |
| NA | Psyr_3990 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4748908 | 1011 | + | 0.533136 |
| NA | Psyr_1080 | Excinuclease ABC, C subunit, N-terminal | SubName: Full=Excinuclease ABC, C subunit, N-terminal; | chromosome | CDS | 1222555 | 342 | + | 0.614035 |
| NA | Psyr_2759 | Eukaryotic-like DNA topoisomerase I | SubName: Full=Eukaryotic-like DNA topoisomerase I; | chromosome | CDS | 3346803 | 1071 | + | 0.602241 |
| NA | Psyr_1378 | RecA bacterial DNA recombination protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 1562480 | 1065 | + | 0.585916 |
| NA | Psyr_3791 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal | SubName: Full=Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; | chromosome | CDS | 4506809 | 1338 | - | 0.622571 |
| NA | Psyr_0961 | Deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photo-lyase type I; EC=4.1.99.3; | chromosome | CDS | 1094638 | 1449 | - | 0.610766 |
| NA | Psyr_1750 | Histone-like bacterial DNA-binding protein | SubName: Full=Bacterial nucleoid protein HU beta subunit; | chromosome | CDS | 1989565 | 273 | + | 0.542125 |
| NA | Psyr_0606 | Exonuclease VII, small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome | CDS | 696563 | 246 | - | 0.617886 |
| NA | Psyr_2168 | Integration host factor, alpha subunit | RecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; | chromosome | CDS | 2522380 | 303 | + | 0.541254 |
| NA | Psyr_2909 | DEAD_2 | SubName: Full=DEAD_2; | chromosome | CDS | 3489280 | 2328 | - | 0.621134 |
| NA | Psyr_0680 | Exodeoxyribonuclease V, RecC subunit | SubName: Full=DNA helicase/exodeoxyribonuclease V, gamma subunit; EC=3.1.11.5; | chromosome | CDS | 777540 | 3474 | + | 0.610248 |
| NA | Psyr_3396 | RecR protein | RecName: Full=Recombination protein RecR; | chromosome | CDS | 4053568 | 603 | - | 0.650083 |
| NA | Psyr_1298 | RecJ exonuclease | SubName: Full=Exonuclease RecJ; EC=3.1.-.-; | chromosome | CDS | 1465993 | 1716 | + | 0.628788 |
| NA | Psyr_1452 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1638691 | 1464 | - | 0.547131 |
| NA | Psyr_1410 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 1596169 | 1062 | + | 0.614878 |
| NA | Psyr_1531 | DnaB helicase | SubName: Full=Replicative DNA helicase (Phage and plasmid); EC=3.6.1.-; | chromosome | CDS | 1720372 | 1347 | - | 0.541203 |
| NA | Psyr_4374 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5230568 | 456 | - | 0.554825 |
| NA | Psyr_4843 | NUDIX hydrolase | RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome | CDS | 5750022 | 480 | - | 0.5625 |
| NA | Psyr_0570 | DNA mismatch repair protein | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 647607 | 1947 | + | 0.631741 |
| NA | Psyr_1715 | Exonuclease SbcD | SubName: Full=Exodeoxyribonuclease I subunit D; EC=3.1.11.1; | chromosome | CDS | 1943288 | 1245 | - | 0.646586 |
| NA | Psyr_2817 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3392815 | 468 | + | 0.544872 |
| NA | Psyr_2798 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 3380400 | 450 | - | 0.522222 |
| NA | Psyr_1533 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1722416 | 756 | - | 0.541005 |
| NA | Psyr_2667 | Transposase Tn3 | SubName: Full=Transposase Tn3; | chromosome | CDS | 3236917 | 2886 | - | 0.619543 |
| NA | Psyr_1975 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; Flags: Precursor; | chromosome | CDS | 2292586 | 807 | - | 0.532838 |
| NA | Psyr_2430 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 2812267 | 399 | - | 0.588972 |
| NA | Psyr_2060 | TatD-related deoxyribonuclease | SubName: Full=Sec-independent protein translocase TatD; EC=3.1.21.-; | chromosome | CDS | 2406820 | 822 | - | 0.615572 |
| NA | Psyr_0523 | Lipopolysaccharide kinase | SubName: Full=Lipopolysaccharide kinase; | chromosome | CDS | 585620 | 807 | + | 0.615861 |
| NA | Psyr_5065 | UvrD/REP helicase | SubName: Full=ATP-dependent DNA helicase UvrD; EC=3.6.1.-; | chromosome | CDS | 6008585 | 2184 | + | 0.614927 |
| NA | Psyr_4518 | Single-strand binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome | CDS | 5382540 | 552 | - | 0.576087 |
| NA | Psyr_4941 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 5857194 | 567 | - | 0.631393 |
| NA | Psyr_4948 | ATP-dependent DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase, RecQ-like protein; EC=3.6.1.-; | chromosome | CDS | 5864093 | 1950 | - | 0.602564 |
| NA | Psyr_0273 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 291899 | 837 | - | 0.506571 |
| NA | Psyr_1357 | Ribonuclease H | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 1537295 | 657 | + | 0.604262 |
| NA | Psyr_4616 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 5474547 | 837 | - | 0.506571 |
| NA | Psyr_3888 | Endonuclease III/Nth | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 4629580 | 639 | + | 0.555556 |
| NA | Psyr_2751 | Phage integrase:Phage integrase, N-terminal SAM-like | SubName: Full=Phage integrase:Phage integrase, N-terminal SAM-like protein; | chromosome | CDS | 3339505 | 966 | - | 0.604555 |
| NA | Psyr_4300 | DNA polymerase III, epsilon subunit | SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7; | chromosome | CDS | 5126781 | 615 | - | 0.626016 |
| NA | Psyr_1896 | Transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 2166974 | 3453 | - | 0.621778 |
| NA | Psyr_1464 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1652193 | 1452 | - | 0.561983 |
| NA | Psyr_0341 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 363882 | 234 | + | 0.576923 |
| NA | Psyr_0525 | Lipopolysaccharide kinase | SubName: Full=Lipopolysaccharide kinase; | chromosome | CDS | 587157 | 780 | + | 0.60641 |
| NA | Psyr_1520 | SNF2-related:Helicase, C-terminal | SubName: Full=SNF2-related:Helicase, C-terminal; | chromosome | CDS | 1708268 | 1953 | - | 0.564772 |
| NA | Psyr_4608 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 5465472 | 783 | + | 0.551724 |
| NA | Psyr_0681 | Exodeoxyribonuclease V, beta subunit | SubName: Full=DNA helicase/exodeoxyribonuclease V, beta subunit; EC=3.1.11.5; | chromosome | CDS | 781010 | 3693 | + | 0.637422 |
| NA | Psyr_1655 | TatD-related deoxyribonuclease | SubName: Full=TatD-related deoxyribonuclease; | chromosome | CDS | 1859037 | 786 | + | 0.625954 |
| NA | Psyr_3810 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 4531582 | 822 | - | 0.56691 |
| NA | Psyr_1273 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 1438999 | 597 | + | 0.603015 |
| NA | Psyr_2653 | ISPsy8, transposase OrfA | SubName: Full=ISPsy8, transposase OrfA; | chromosome | CDS | 3224311 | 516 | + | 0.534884 |
| NA | Psyr_4197 | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 4993564 | 1674 | + | 0.613501 |
| NA | Psyr_3895 | Ribonuclease T | RecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; Short=RNase T; | chromosome | CDS | 4636903 | 678 | + | 0.616519 |
| NA | Psyr_1764 | DNA polymerase III, epsilon subunit:DNA polymerase 3, epsilon subunit | SubName: Full=DNA polymerase III, epsilon subunit; EC=2.7.7.7; | chromosome | CDS | 2005215 | 780 | + | 0.588462 |
| NA | Psyr_2825 | DNA methylase N-4/N-6 | SubName: Full=DNA methylase N-4/N-6; | chromosome | CDS | 3399004 | 1122 | + | 0.618538 |
| NA | Psyr_3177 | AAA ATPase, central region | SubName: Full=Recombination protein MgsA; | chromosome | CDS | 3803963 | 1323 | - | 0.608466 |
| NA | Psyr_1070 | Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal | RecName: Full=ATP-dependent RNA helicase RhlB; EC=3.6.4.13; | chromosome | CDS | 1212230 | 1458 | - | 0.613169 |
| NA | Psyr_0003 | RecF protein | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 2701 | 1104 | + | 0.570652 |
| NA | Psyr_1397 | DNA-directed DNA polymerase | RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; | chromosome | CDS | 1582602 | 1065 | + | 0.605634 |
| NA | Psyr_2761 | DNA-directed DNA polymerase | SubName: Full=DNA-directed DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 3348722 | 1281 | - | 0.5605 |
| NA | Psyr_2828 | C-5 cytosine-specific DNA methylase | SubName: Full=C-5 cytosine-specific DNA methylase; | chromosome | CDS | 3401768 | 2055 | + | 0.62871 |
| NA | Psyr_3918 | NUDIX hydrolase | SubName: Full=NUDIX hydrolase; | chromosome | CDS | 4661497 | 411 | - | 0.63747 |
| NA | Psyr_0746 | IS66 Orf2 like | SubName: Full=IS66 Orf2 like protein; | chromosome | CDS | 848631 | 366 | - | 0.601093 |
| NA | Psyr_1492 | Phage integrase:Phage integrase, N-terminal SAM-like | SubName: Full=Phage integrase:Phage integrase, N-terminal SAM-like protein; | chromosome | CDS | 1680090 | 963 | + | 0.589823 |
| NA | Psyr_0535 | toluene tolerance protein, putative | SubName: Full=Toluene tolerance protein, putative; Flags: Precursor; | chromosome | CDS | 604151 | 756 | - | 0.595238 |
| NA | Psyr_0400 | Staphylococcus nuclease (SNase-like) | SubName: Full=Nuclease (SNase-like); Flags: Precursor; | chromosome | CDS | 428135 | 804 | + | 0.649254 |
| NA | Psyr_2832 | Phage integrase:Phage integrase, N-terminal SAM-like | SubName: Full=Phage integrase:Phage integrase, N-terminal SAM-like protein; | chromosome | CDS | 3406247 | 1035 | + | 0.569082 |
| NA | Psyr_0004 | DNA gyrase, B subunit | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 3809 | 2418 | + | 0.565343 |
| NA | Psyr_4860 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; Flags: Precursor; | chromosome | CDS | 5767943 | 807 | + | 0.539033 |
| NA | Psyr_2476 | AP endonuclease, family 1:Exodeoxyribonuclease III xth | SubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; | chromosome | CDS | 2870547 | 813 | - | 0.575646 |
| NA | Psyr_0652 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 740007 | 783 | + | 0.551724 |
| NA | Psyr_1259 | Exonuclease VII, large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; | chromosome | CDS | 1415962 | 1392 | - | 0.647988 |
| NA | Psyr_0095 | Transposase, IS4 | SubName: Full=Transposase, IS4 family; | chromosome | CDS | 104951 | 1419 | - | 0.565891 |
| NA | Psyr_0484 | Conserved hypothetical protein 250 | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 522103 | 441 | - | 0.614512 |
| NA | Psyr_0778 | NUDIX hydrolase | chromosome | CDS | 883365 | 2109 | + | 0.536747 | |
| NA | Psyr_0585 | DnaB helicase | SubName: Full=Primary replicative DNA helicase; EC=3.6.1.-; | chromosome | CDS | 665791 | 1395 | + | 0.6 |
| NA | Psyr_4903 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 5816911 | 1122 | + | 0.502674 |
| NA | Psyr_1819 | NAD-dependent DNA ligase | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 2097011 | 2364 | + | 0.625634 |
| NA | Psyr_0021 | SMF protein | SubName: Full=DNA protecting protein DprA; | chromosome | CDS | 24821 | 1119 | + | 0.641644 |
| NA | Psyr_2522 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 2930230 | 1431 | + | 0.660377 |
| NA | Psyr_1057 | alginate biosynthesis protein AlgX | SubName: Full=Alginate biosynthesis protein AlgX; Flags: Precursor; | chromosome | CDS | 1195942 | 1440 | - | 0.586111 |
| NA | Psyr_1212 | type III secretion protein HrpO | SubName: Full=Type III secretion protein HrpO; | chromosome | CDS | 1368608 | 447 | - | 0.592841 |
| NA | Psyr_1376 | MutS 1 protein | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 1558832 | 2580 | - | 0.617442 |
| NA | Psyr_3641 | Integration host factor, beta subunit | RecName: Full=Integration host factor subunit beta; Short=IHF-beta; | chromosome | CDS | 4323375 | 297 | - | 0.56229 |
| NA | Psyr_0105 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 116991 | 822 | - | 0.56691 |
| NA | Psyr_1358 | DNA polymerase III alpha subunit | SubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; | chromosome | CDS | 1538020 | 3522 | + | 0.599659 |
| NA | Psyr_1176 | Integrase, catalytic region | SubName: Full=Integrase, catalytic region; | chromosome | CDS | 1330328 | 837 | - | 0.506571 |
| NA | Psyr_0819 | TatD-related deoxyribonuclease | SubName: Full=TatD-related deoxyribonuclease; | chromosome | CDS | 924634 | 795 | - | 0.644025 |
| NA | Psyr_1473 | DNA topoisomerase III | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | chromosome | CDS | 1659653 | 2022 | - | 0.557863 |
| NA | Psyr_1714 | exonuclease SbcC | SubName: Full=Exonuclease SbcC; | chromosome | CDS | 1939647 | 3645 | - | 0.624966 |
| NA | Psyr_3366 | DNA-3-methyladenine glycosylase II | SubName: Full=DNA-3-methyladenine glycosylase II; EC=3.2.2.21; | chromosome | CDS | 4024950 | 666 | - | 0.627628 |
| NA | Psyr_2361 | DNA polymerase B, exonuclease:DNA polymerase B region | RecName: Full=DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 2737422 | 2364 | + | 0.608714 |
| NA | Psyr_4617 | ISPsy9, transposase OrfA | SubName: Full=ISPsy9, transposase OrfA; | chromosome | CDS | 5475383 | 540 | - | 0.525926 |
| NA | Psyr_3619 | Helicase, C-terminal:DbpA, RNA-binding:DEAD/DEAH box helicase, N-terminal | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome | CDS | 4303040 | 1674 | - | 0.622461 |
| NA | Psyr_0274 | ISPsy9, transposase OrfA | SubName: Full=ISPsy9, transposase OrfA; | chromosome | CDS | 292735 | 540 | - | 0.525926 |
| NA | Psyr_1421 | Phage integrase | SubName: Full=Phage integrase; | chromosome | CDS | 1607964 | 1407 | - | 0.556503 |
| NA | Psyr_3805 | unnamed protein product; similar to a putative DNA processing protein | SubName: Full=Uncharacterized protein; | chromosome | CDS | 4524298 | 1368 | + | 0.526316 |
| NA | Psyr_2523 | DNA polymerase III alpha subunit | RecName: Full=Error-prone DNA polymerase; EC=2.7.7.7; | chromosome | CDS | 2931657 | 3096 | + | 0.63146 |
| NA | Psyr_4354 | DNA-directed DNA polymerase | SubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; | chromosome | CDS | 5208672 | 1038 | + | 0.636802 |
| NA | Psyr_4520 | Excinuclease ABC, A subunit | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 5384574 | 2886 | + | 0.60499 |
| NA | Psyr_2985 | 2OG-Fe(II) oxygenase superfamily | SubName: Full=DNA-N1-methyladenine dioxygenase; EC=1.14.11.-; | chromosome | CDS | 3576049 | 687 | + | 0.627365 |
| NA | Psyr_2244 | DNA topoisomerase III | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | chromosome | CDS | 2608140 | 1971 | - | 0.639269 |
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