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2024-04-28 00:04:54

Gene list

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COG category: Replication, recombination and repair
Organism: Haemophilus influenzae 86-028NP, 86-028NP

Number of genes found: 129

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Haemophilus influenzae 86-028NP, 86-028NP
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA NTHI0444 predicted primosomal replication protein Nchromosome CDS422049 588 + 0.329932
NA NTHI0693 conserved hypothetical transposase-like proteinchromosome CDS651035 354 - 0.355932
NA NTHI1183 conserved hypothetical proteinchromosome CDS1130065 348 + 0.373563
NA NTHI1653 conserved hypothetical transposase-like proteinchromosome CDS1535066 372 - 0.354839
NA NTHI1487 modification methylase Bsp6I-likechromosome CDS1411560 1164 - 0.464777
NA NTHI1495 modification methylase DpnIIB-likechromosome CDS1418398 738 - 0.426829
NA NTHI0419 prophage CP4-57-like integrasechromosome CDS402483 1212 + 0.344059
NA NTHI1650 conserved hypothetical proteinchromosome CDS1533727 729 + 0.301783
NA NTHI1523 predicted DNA modification methylasechromosome CDS1432534 420 + 0.347619
NA NTHI0683 conserved hypothetical proteinchromosome CDS642171 543 - 0.305709
NA NTHI0201_1 conserved hypothetical proteinchromosome CDS184665 297 - 0.282828
NA NTHI1499 hypothetical proteinchromosome CDS1420617 312 - 0.445513
NA NTHI0322 predicted uracil-DNA glycosylasechromosome CDS303878 645 - 0.341085
NA NTHI1458 predicted ATPase related to the helicase subunit of the holliday junction resolvasechromosome CDS1384709 1341 + 0.417599
NA NTHI1828 predicted micrococcal nuclease-like proteinchromosome CDS1682699 483 + 0.358178
NA NTHI0164 putative site-specific recombinasechromosome CDS146462 843 + 0.298932
NA NTHI1447 hypothetical proteinchromosome CDS1368502 165 - 0.4
NA NTHI1966 conserved putative deoxyribonucleasechromosome CDS1813729 756 - 0.35582
NA NTHI1509 hypothetical proteinchromosome CDS1425497 510 - 0.390196
NA NTHI1460 modification methylase BepI-likechromosome CDS1387289 1224 - 0.332516
NA NTHI1522 hypothetical proteinchromosome CDS1431596 960 + 0.369792
NA NTHI1887 predicted capsid scaffolding proteinchromosome CDS1723299 816 - 0.417892
NA NTHI0581 putative deoxyribonucleasechromosome CDS541172 783 - 0.413793
NA NTHI1711 putative integrase/recombinasechromosome CDS1575288 357 + 0.392157
NA NTHI1942 predicted ATPase involved in DNA replication initiationchromosome CDS1787143 696 + 0.331897
NA NTHI1492 predicted recombinational DNA repair protein, RecE pathwaychromosome CDS1416817 921 - 0.408252
NA NTHI0095 putative deoxyribonucleasechromosome CDS87739 789 + 0.386565
NA NTHI1445 hypothetical proteinchromosome CDS1367371 168 + 0.446429
NA NTHI1958 predicted endonuclease distantly related to archaeal holliday junction resolvasechromosome CDS1803232 360 + 0.363889
NA NTHI1480 prophage CP4-57-like integrasechromosome CDS1407432 1260 + 0.36746
NA NTHI1740 conserved hypothetical proteinchromosome CDS1592079 513 + 0.395712
NA NTHI0778 Zn-finger domain associated with topoisomerase type Ichromosome CDS731141 537 - 0.383613
NA NTHI0158 resolvase/integrase-like proteinchromosome CDS138937 600 - 0.368333
NA NTHI0928 predicted N6-adenine-specific methylasechromosome CDS894225 582 - 0.371134
NA NTHI0156 conserved hypothetical proteinchromosome CDS137401 678 + 0.445428
adpP NTHI0519 ADP-ribose pyrophosphatasechromosome CDS487948 654 + 0.414373
comB NTHI0564 competence protein Bchromosome CDS524801 507 - 0.339251
dam NTHI0307 DNA adenine methylasechromosome CDS284919 861 + 0.348432
deaD NTHI0337 Cold-shock DEAD-box protein A homologchromosome CDS323624 1842 + 0.418567
dinG NTHI0507 probable ATP-dependent helicasechromosome CDS474885 1923 + 0.369735
dnaA NTHI1167 chromosomal replication initiator protein DnaAchromosome CDS1112123 1365 - 0.396337
dnaB NTHI1477 replicative DNA helicasechromosome CDS1403911 1515 - 0.39604
dnaB2 NTHI0102 replicative DNA helicasechromosome CDS93172 1356 + 0.382006
dnaE NTHI0897 DNA polymerase III alpha subunitchromosome CDS863014 3480 - 0.418103
dnaG NTHI0658 DNA primasechromosome CDS620591 1782 + 0.395623
dnaN NTHI1166 DNA polymerase III, beta chainchromosome CDS1110830 1101 - 0.396004
dnaQ NTHI0223 DNA polymerase III, epsilon chainchromosome CDS213629 768 - 0.361979
dnaX NTHI1939 DNA polymerase III subunit gamma/tauchromosome CDS1782897 2067 + 0.380261
fis NTHI1152 DNA-binding protein fischromosome CDS1093772 300 + 0.376667
gyrA NTHI1900 DNA gyrase subunit Achromosome CDS1738382 2643 + 0.41468
gyrB NTHI0699 DNA gyrase subunit Bchromosome CDS655289 2421 - 0.412639
haeIIM NTHI1787 modification methylase HaeIIchromosome CDS1631992 957 - 0.308255
hepA NTHI0873 RNA polymerase associated protein homologchromosome CDS829284 2772 + 0.406566
himA NTHI1626 integration host factor alpha-subunitchromosome CDS1512544 291 + 0.381443
holA NTHI1092 DNA polymerase III, delta subunitchromosome CDS1038568 1035 + 0.360386
holB NTHI0582 DNA polymerase III, delta' subunitchromosome CDS542009 984 - 0.406504
holC NTHI1753 DNA polymerase III, chi subunitchromosome CDS1602769 435 + 0.367816
holD NTHI0015 DNA polymerase III, psi subunitchromosome CDS11864 405 - 0.407407
hrpA NTHI1231 ATP-dependent helicase HrpA homologchromosome CDS1171476 3909 - 0.420568
hupA NTHI0554 DNA-binding protein HUchromosome CDS519256 411 - 0.347932
ihfB NTHI1947 integration host factor beta-subunitchromosome CDS1790467 285 - 0.347368
kdkA NTHI0367 3-deoxy-D-manno-octulosonic acid kinasechromosome CDS352020 726 - 0.381543
ligA NTHI1352 DNA ligasechromosome CDS1280769 915 + 0.353005
ligN NTHI1265 DNA ligasechromosome CDS1198804 2040 - 0.406373
mfd NTHI1906 transcription-repair coupling factorchromosome CDS1747115 3441 - 0.401918
mutH NTHI0524 DNA mismatch repair protein MutHchromosome CDS492005 672 + 0.421131
mutL NTHI0080 DNA mismatch repair protein MutLchromosome CDS71595 1890 + 0.395767
mutM NTHI1118 formamidopyrimidine-DNA glycosylasechromosome CDS1064182 816 - 0.373774
mutS NTHI0834 DNA mismatch repair protein MutSchromosome CDS783990 2586 + 0.423434
mutT NTHI1077 mutator protein MutTchromosome CDS1022726 411 + 0.384428
mutY NTHI0919 A/G-specific adenine glycosylasechromosome CDS886928 1137 + 0.387863
nth NTHI1996 endonuclease IIIchromosome CDS1848282 636 + 0.383648
ntpA NTHI0434 dATP pyrophosphohydrolasechromosome CDS414607 474 - 0.362869
nudC NTHI0557 NADH pyrophosphatasechromosome CDS520294 795 - 0.386164
nudH NTHI1068 probable nucleoside polyphosphate hydrolasechromosome CDS1015526 591 + 0.394247
ogt NTHI0523 methylated-DNA--protein-cysteinemethyltransferasechromosome CDS491439 570 + 0.403509
parC NTHI1604 topoisomerase IV subunit Achromosome CDS1492778 2244 - 0.403743
parE NTHI1605 topoisomerase IV subunit Bchromosome CDS1495088 1899 - 0.419695
polA NTHI1024 DNA polymerase Ichromosome CDS967051 2793 - 0.405299
priA NTHI0458 primosomal protein N'chromosome CDS433277 2193 - 0.412677
priB NTHI0672 primosomal replication protein Nchromosome CDS634652 327 - 0.35474
radC NTHI1125 DNA repair protein RadC homologchromosome CDS1069905 705 - 0.337589
radC2 NTHI0117 putative DNA repair radC-like proteinchromosome CDS106418 471 + 0.33758
rdgC NTHI1488 recombination associated proteinchromosome CDS1413329 897 - 0.400223
recA NTHI0729 RecAchromosome CDS684631 1065 + 0.388732
recB NTHI1644 exodeoxyribonuclease V beta chainchromosome CDS1524815 3636 + 0.356986
recC NTHI1113 exodeoxyribonuclease V gamma chainchromosome CDS1058095 3366 + 0.366904
recD NTHI1646 exodeoxyribonuclease V alpha chainchromosome CDS1528450 1923 + 0.388456
recF NTHI1165 DNA replication and repair protein RecFchromosome CDS1109749 1080 - 0.4
recG NTHI2051 ATP-dependent DNA helicasechromosome CDS1907959 2082 - 0.416427
recJ NTHI1385 single-stranded-DNA-specific exonuclease RecJchromosome CDS1313342 1728 + 0.398148
recN NTHI0083 DNA repair protein RecNchromosome CDS77463 1677 - 0.380441
recO NTHI0450 DNA repair protein RecOchromosome CDS426467 711 + 0.414909
recQ NTHI0887 ATP-dependent DNA helicase RecQchromosome CDS847693 1860 + 0.398387
recR NTHI0570 recombination protein RecRchromosome CDS530345 603 + 0.434494
relB NTHI0838 DNA-damage-inducible protein J, negative regulator of translationchromosome CDS791015 297 + 0.356902
rep NTHI0769 ATP-dependent DNA helicase repchromosome CDS723521 2013 - 0.407352
rhlB NTHI1057 ATP-dependent RNA helicase RhlBchromosome CDS1003463 1257 + 0.404932
rnhA NTHI0224 ribonuclease HIchromosome CDS214457 465 + 0.348387
rnhB NTHI1219 ribonuclease HIIchromosome CDS1161534 594 - 0.430976
rnt NTHI0442 ribonuclease Tchromosome CDS419661 690 + 0.404348
ruvA NTHI0431 holliday junction DNA helicase RuvAchromosome CDS412559 615 - 0.378862
ruvB NTHI0430 holliday junction DNA helicase RuvBchromosome CDS411544 1008 - 0.421627
ruvC NTHI0432 crossover junction endodeoxyribonuclease RuvCchromosome CDS413236 573 - 0.418848
ruvX NTHI0416 putative holliday junction resolvasechromosome CDS400894 420 + 0.402381
sbcB NTHI1780 exodeoxyribonuclease Ichromosome CDS1622370 1422 - 0.35443
seqA NTHI0289 SeqAchromosome CDS267655 606 + 0.361386
smf NTHI1157 Smfchromosome CDS1097360 1122 - 0.396613
srmB NTHI0546 ATP-dependent RNA helicase SrmBchromosome CDS510036 1320 - 0.412121
ssb NTHI0356 Single-strand binding proteinchromosome CDS344428 507 + 0.433925
ssb2 NTHI0109 Single-strand binding proteinchromosome CDS99930 423 + 0.41844
ssb3 NTHI1490 Single-strand binding proteinchromosome CDS1415758 435 - 0.432184
tag NTHI0774 DNA-3-methyladenine glycosylasechromosome CDS728322 564 - 0.397163
tnpA NTHI0141 transposon Tn3 transposasechromosome CDS124955 3006 - 0.515968
tnpR NTHI0142 transposon Tn3 resolvasechromosome CDS128088 639 + 0.494523
topA NTHI1799 DNA topoisomerase Ichromosome CDS1644504 2607 - 0.393556
topB NTHI0571 DNA topoisomerase IIIchromosome CDS530963 1956 + 0.403885
topB2 NTHI0112 DNA topoisomerase IIIchromosome CDS101746 2061 + 0.388646
traC NTHI0152 conserved putative antirestriction proteinchromosome CDS134387 954 + 0.3826
ung NTHI0025 uracil-DNA glycosylasechromosome CDS18688 660 + 0.392424
uvrA NTHI0355 UvrABC system protein Achromosome CDS341444 2832 - 0.411017
uvrB NTHI1917 UvrABC system protein Bchromosome CDS1758207 2040 + 0.396569
uvrC NTHI0067 UvrABC system protein Cchromosome CDS59036 1830 - 0.393443
uvrD NTHI1359 DNA helicase IIchromosome CDS1285693 2184 - 0.39881
xerC NTHI0798 site-specific recombinase XerCchromosome CDS749861 888 - 0.402027
xerD NTHI0428 Site-specific recombinase XerDchromosome CDS410139 894 + 0.414989
xseA NTHI0518 exodeoxyribonuclease VII large subunitchromosome CDS486452 1320 + 0.415152
xseB NTHI1693 exodeoxyribonuclease VII small subunitchromosome CDS1561840 255 - 0.380392
xthA NTHI0049 exodeoxyribonuclease IIIchromosome CDS43638 804 - 0.368159