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2024-05-03 05:06:43

Gene list

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COG category: Replication, recombination and repair
Organism: Streptococcus pyogenes phage 6180.4

Number of genes found: 137

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Streptococcus pyogenes phage 6180.4
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA M28_Spy1335 transposasechromosome CDS1315777 186 + 0.354839
NA M28_Spy0170 transposasechromosome CDS188397 534 - 0.363296
NA M28_Spy0373 uracil DNA glycosylase superfamily proteinchromosome CDS391459 576 + 0.421875
NA M28_Spy1172 exodeoxyribonuclease VII large subunitchromosome CDS1176734 1356 - 0.424041
NA M28_Spy0163 transposasechromosome CDS183636 216 - 0.342593
NA M28_Spy0793 integrase pseudogenechromosome CDS814296 384 + 0.356771
NA M28_Spy1086 hypothetical proteinchromosome CDS1089612 291 - 0.254296
NA M28_Spy0448 transposasechromosome CDS455123 732 - 0.333333
NA M28_Spy1392 methyltransferasechromosome CDS1388577 1155 - 0.397403
NA M28_Spy1789 DNA integration/recombination/invertion proteinchromosome CDS1807287 1164 - 0.357388
NA M28_Spy1303 DNA integration/recombination/invertion proteinchromosome CDS1286437 1137 - 0.283201
NA M28_Spy1104 transposasechromosome CDS1109097 1143 - 0.381452
NA M28_Spy1698 transposasechromosome CDS1703054 1143 - 0.381452
NA M28_Spy1684 ATPase, AAA familychromosome CDS1689606 1269 + 0.429472
NA M28_Spy0859 DNA topoisomerase Ichromosome CDS877546 2130 + 0.381221
NA M28_Spy1290 hypothetical proteinchromosome CDS1272444 1026 - 0.380117
NA M28_Spy0449 transposasechromosome CDS455974 321 - 0.367601
NA M28_Spy0536 transposasechromosome CDS547001 645 - 0.404651
NA M28_Spy1079 site-specific recombinasechromosome CDS1081126 1680 - 0.341071
NA M28_Spy0352 phosphohydrolasechromosome CDS372441 555 + 0.409009
NA M28_Spy0440 chromosome segregation ATPaseschromosome CDS449892 1659 - 0.364678
NA M28_Spy1321 transcriptional regulator, Cro/CI familychromosome CDS1300598 1242 - 0.311594
NA M28_Spy1105 DNA polymerase III subunit gamma/tauchromosome CDS1110500 1686 - 0.414591
NA M28_Spy1552 ribonuclease HIIIchromosome CDS1550089 903 + 0.368771
NA M28_Spy1274 DnaD-like proteinchromosome CDS1262619 414 - 0.362319
NA M28_Spy0165 transposasechromosome CDS184164 297 - 0.377104
NA M28_Spy0752 transposasechromosome CDS777738 1143 + 0.379703
NA M28_Spy0296 DNA integration/recombination/invertion proteinchromosome CDS316741 747 + 0.331995
NA M28_Spy0091 adenine-specific methyltransferasechromosome CDS105208 999 + 0.38038
NA M28_Spy1633 DNA integration/recombination/invertion proteinchromosome CDS1635838 150 + 0.353333
NA M28_Spy1266 phage proteinchromosome CDS1259763 441 - 0.387755
NA M28_Spy0339 transposasechromosome CDS360431 246 - 0.382114
NA M28_Spy0857 ribonuclease HIIchromosome CDS875822 717 + 0.414226
NA M28_Spy0166 transposasechromosome CDS184493 294 - 0.377551
NA M28_Spy0530 DNA integration/recombination/invertion proteinchromosome CDS539084 216 - 0.337963
NA M28_Spy0215 ribonuclease M5chromosome CDS229700 612 + 0.454248
NA M28_Spy0377 phosphohydrolasechromosome CDS394069 522 + 0.404215
NA M28_Spy0340 transposasechromosome CDS360965 459 - 0.420479
NA M28_Spy1780 hypothetical proteinchromosome CDS1798758 420 - 0.378571
NA M28_Spy0998 phage terminase small subunitchromosome CDS1011585 546 - 0.384615
NA M28_Spy0169 transposasechromosome CDS187570 807 - 0.402726
NA M28_Spy0444 RelB-domain proteinchromosome CDS452878 330 + 0.372727
NA M28_Spy0164 transposasechromosome CDS183891 171 - 0.415205
NA M28_Spy0774 DNA-cytosine methyltransferasechromosome CDS800079 333 + 0.414414
NA M28_Spy1896 transposasechromosome CDS1893593 588 - 0.411565
NA M28_Spy0717 mutator protein Tchromosome CDS737716 477 + 0.396226
NA M28_Spy1864 DNA integration/recombination/invertion proteinchromosome CDS1856284 1164 + 0.379725
NA M28_Spy1014 phage DNA/RNA helicasechromosome CDS1021606 1368 - 0.361111
NA M28_Spy1206 methyltransferasechromosome CDS1212003 540 - 0.37963
NA M28_Spy1072 transposasechromosome CDS1074338 807 + 0.400248
NA M28_Spy1632 DNA integration/recombination/invertion proteinchromosome CDS1635136 342 + 0.412281
NA M28_Spy1848 phage proteinchromosome CDS1848815 789 - 0.358682
NA M28_Spy1162 DNA-binding protein HUchromosome CDS1168755 276 - 0.405797
NA M28_Spy0382 transposasechromosome CDS396348 582 - 0.376289
NA M28_Spy0632 cell surface proteinchromosome CDS653876 3027 + 0.358771
NA M28_Spy1277 phage proteinchromosome CDS1263719 345 - 0.342029
NA M28_Spy1033 DNA integration/recombination/invertion proteinchromosome CDS1031217 1125 + 0.335111
NA M28_Spy1406 ATP-dependent RNA helicasechromosome CDS1403015 1344 - 0.419643
NA M28_Spy1285 DNA integration/recombination/invertion proteinchromosome CDS1267971 1158 + 0.375648
NA M28_Spy1083 nickasechromosome CDS1085573 1230 - 0.266667
NA M28_Spy1302 transposasechromosome CDS1284967 1143 - 0.381452
NA M28_Spy1871 phosphohydrolasechromosome CDS1865168 318 - 0.352201
NA M28_Spy1071 transposasechromosome CDS1073784 534 + 0.363296
NA M28_Spy0749 hypothetical cytosolic proteinchromosome CDS775337 870 + 0.356322
NA M28_Spy0381 transposasechromosome CDS396169 267 - 0.355805
NA M28_Spy1291 hypothetical proteinchromosome CDS1273466 675 - 0.397037
NA M28_Spy1140 DNA polymerase III, delta subunitchromosome CDS1145264 1041 - 0.367915
NA M28_Spy0032 hypothetical proteinchromosome CDS49860 1452 + 0.307163
NA M28_Spy1812 phage proteinchromosome CDS1820050 384 + 0.377604
NA M28_Spy1334 hypothetical proteinchromosome CDS1315463 294 - 0.295918
NA M28_Spy0249 transposasechromosome CDS267765 147 - 0.37415
NA M28_Spy0855 hypothetical cytosolic proteinchromosome CDS874250 441 - 0.371882
NA M28_Spy1289 hypothetical cytosolic proteinchromosome CDS1272140 294 - 0.391156
NA M28_Spy1146 hypothetical protein with endo/excinuclease domainchromosome CDS1151083 279 + 0.365591
NA M28_Spy1833 phosphohydrolasechromosome CDS1839809 642 - 0.390966
comEA M28_Spy1143 ComE operon protein 1chromosome CDS1148598 663 - 0.374057
comFA M28_Spy1368 ComF operon protein 1chromosome CDS1362949 1326 - 0.362745
deaD M28_Spy1148 ATP-dependent RNA helicasechromosome CDS1153512 1620 - 0.417901
deaD2 M28_Spy1110 ATP-dependent RNA helicasechromosome CDS1114723 1119 + 0.387846
dinG M28_Spy0514 ATP-dependent helicasechromosome CDS520381 2502 + 0.380096
dinP M28_Spy1556 DNA polymerase IVchromosome CDS1554682 1095 - 0.417352
dnaA M28_Spy0001 chromosomal replication initiator proteinchromosome CDS202 1356 + 0.332596
dnaB M28_Spy0277 replicative DNA helicasechromosome CDS297529 1176 + 0.371599
dnaD M28_Spy0709 phage proteinchromosome CDS730672 684 + 0.358187
dnaE M28_Spy0962 DNA polymerase III alpha subunitchromosome CDS979891 3111 - 0.377692
dnaG M28_Spy0578 DNA primasechromosome CDS599389 1815 + 0.385675
dnaI M28_Spy0278 primosomal proteinchromosome CDS298705 903 + 0.413068
dnaN M28_Spy0002 DNA polymerase III, beta chainchromosome CDS1712 1137 + 0.333333
dnaQ M28_Spy1570 DNA polymerase III, epsilon chainchromosome CDS1569659 627 - 0.395534
dnaX M28_Spy0320 DNA polymerase III, delta' subunitchromosome CDS338557 876 + 0.394977
exoA M28_Spy0327 exodeoxyribonuclease IIIchromosome CDS342950 912 - 0.421053
fpg M28_Spy0396 formamidopyrimidine-DNA glycosylasechromosome CDS403570 828 + 0.429952
gyrA M28_Spy0848 DNA gyrase subunit Achromosome CDS867726 2487 + 0.400483
gyrB M28_Spy0532 DNA gyrase subunit Bchromosome CDS540307 1953 + 0.398874
holB M28_Spy1867 replicative DNA helicasechromosome CDS1859234 1377 - 0.390704
lig M28_Spy0551 NAD-dependent DNA ligasechromosome CDS570104 1959 + 0.404798
mutL M28_Spy1788 DNA mismatch repair proteinchromosome CDS1805210 2022 - 0.391691
mutS M28_Spy1814 DNA mismatch repair proteinchromosome CDS1821648 2556 - 0.402973
mutS2 M28_Spy1549 DNA mismatch repair proteinchromosome CDS1546588 2457 - 0.367114
mutT M28_Spy1180 mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase)chromosome CDS1187204 456 + 0.392544
mutY M28_Spy1544 A/G-specific adenine DNA glycosylasechromosome CDS1543819 1155 + 0.385281
nth M28_Spy0710 endonuclease IIIchromosome CDS731352 657 + 0.392694
parC M28_Spy0692 topoisomerase IV subunit Achromosome CDS713550 2466 + 0.402271
parE M28_Spy0691 topoisomerase IV subunit Bchromosome CDS711513 1953 + 0.414747
pcrA M28_Spy0949 DNA helicase IIchromosome CDS964661 2319 - 0.410953
phr M28_Spy1175 deoxyribodipyrimidine photolyasechromosome CDS1181161 1434 - 0.37378
polA M28_Spy0157 DNA polymerase Ichromosome CDS176969 2643 + 0.424139
polC M28_Spy1660 DNA polymerase III alpha subunitchromosome CDS1655518 4398 - 0.438381
priA M28_Spy1380 primosomal protein N'chromosome CDS1375295 2412 - 0.388889
radC M28_Spy0816 DNA repair proteinchromosome CDS836772 681 + 0.323054
recA M28_Spy1783 RecAchromosome CDS1800246 1137 - 0.405453
recD M28_Spy1554 exodeoxyribonuclease V alpha chainchromosome CDS1551653 2364 + 0.415398
recF M28_Spy1888 DNA replication and repair protein recFchromosome CDS1882035 1107 + 0.37308
recG M28_Spy1509 ATP-dependent DNA helicasechromosome CDS1501345 2016 - 0.369544
recJ M28_Spy0707 single-stranded-DNA-specific exonucleasechromosome CDS727713 2211 + 0.420172
recN M28_Spy1167 DNA repair proteinchromosome CDS1172709 1665 - 0.395195
recO M28_Spy0019 DNA repair proteinchromosome CDS33440 756 + 0.313492
recR M28_Spy1153 recombination proteinchromosome CDS1160742 597 - 0.410385
rexA M28_Spy0574 ATP-dependent nuclease subunit Achromosome CDS593832 3669 + 0.362224
rexB M28_Spy0573 ATP-dependent nuclease subunit Bchromosome CDS590656 3216 + 0.34857
ruvA M28_Spy1786 holliday junction DNA helicasechromosome CDS1803381 597 - 0.39866
ruvB M28_Spy0035 holliday junction DNA helicasechromosome CDS53819 1071 + 0.393091
sfbX M28_Spy1715 fibronectin-binding proteinchromosome CDS1724588 1950 - 0.455897
smf M28_Spy0858 hypothetical proteinchromosome CDS876603 837 + 0.391876
snf M28_Spy0280 phage-related DNA helicasechromosome CDS301187 3099 + 0.363343
ssb M28_Spy0100 single-strand DNA binding proteinchromosome CDS111783 396 + 0.388889
ssb2.1 M28_Spy1268 phage single-strand DNA binding proteinchromosome CDS1260412 420 - 0.419048
ssb2.2 M28_Spy1541 phage single-strand DNA binding proteinchromosome CDS1542382 492 - 0.428862
tag M28_Spy1785 DNA-3-methyladenine glycosylasechromosome CDS1802811 570 - 0.391228
tatD M28_Spy0214 sec-independent protein translocase proteinchromosome CDS228862 888 + 0.429054
trcF M28_Spy0006 transcription-repair coupling factorchromosome CDS5207 3504 + 0.356735
ung M28_Spy0688 uracil-DNA glycosylasechromosome CDS708637 654 + 0.420489
uvrA M28_Spy1537 excinuclease ABC subunit Achromosome CDS1537081 2859 - 0.426023
uvrB M28_Spy1056 excinuclease ABC subunit Bchromosome CDS1058238 1992 - 0.394076
uvrC M28_Spy0765 excinuclease ABC subunit Cchromosome CDS792230 1797 + 0.372844
xerD M28_Spy0885 recombinasechromosome CDS901549 1107 - 0.373984
xseB M28_Spy1171 exodeoxyribonuclease VII small subunitchromosome CDS1176541 216 - 0.347222