Gene list
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COG category: Replication, recombination and repair
Organism: Rickettsia felis URRWXCal2, URRWXCal2; California 2
Number of genes found: 194
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| Rickettsia felis URRWXCal2, URRWXCal2; California 2 | |||||||||
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| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | RF_p67 | Transposase | SubName: Full=Transposase; | pRF | CDS | 61171 | 180 | + | 0.272222 |
| NA | RF_0387 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 412009 | 237 | - | 0.320675 |
| NA | RF_1342 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1428449 | 237 | + | 0.303797 |
| NA | RF_0341 | Integrase-like protein | SubName: Full=Integrase-like protein; | chromosome | CDS | 361731 | 324 | - | 0.271605 |
| NA | RF_1352 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1438756 | 1572 | - | 0.243003 |
| NA | RF_0624 | unknown | RecName: Full=Uncharacterized protein RF_0624; | chromosome | CDS | 666446 | 2571 | - | 0.288604 |
| NA | RF_1053 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1112045 | 243 | - | 0.312757 |
| NA | RF_0382 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 408615 | 366 | + | 0.289617 |
| NA | RF_0992 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1054741 | 663 | + | 0.250377 |
| NA | RF_p54 | Transposase | SubName: Full=Transposase; | pRF | CDS | 50210 | 693 | - | 0.329004 |
| NA | RF_p31 | Transposase | SubName: Full=Transposase; | pRF | CDS | 31276 | 243 | + | 0.312757 |
| NA | RF_0927 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 986628 | 954 | - | 0.33543 |
| NA | RF_0383 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 409021 | 468 | + | 0.303419 |
| NA | RF_0574 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 610000 | 822 | + | 0.256691 |
| NA | RF_p39 | Conjugative transfer protein TraA_Ti | SubName: Full=Conjugative transfer protein TraA_Ti; | pRF | CDS | 36852 | 2724 | + | 0.381791 |
| NA | RF_0112 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 125851 | 4071 | - | 0.29747 |
| NA | RF_0392 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 415778 | 954 | + | 0.336478 |
| NA | RF_1054 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1112362 | 753 | - | 0.341301 |
| NA | RF_0447 | NACHT domain | SubName: Full=NACHT domain; | chromosome | CDS | 475188 | 1863 | + | 0.29898 |
| NA | RF_0052 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 52876 | 612 | - | 0.357843 |
| NA | RF_0103 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 115583 | 849 | - | 0.339223 |
| NA | RF_pd58 | Transposase | SubName: Full=Transposase; | pRFdelta | CDS | 30891 | 300 | - | 0.34 |
| NA | RF_1205 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1269745 | 243 | + | 0.312757 |
| NA | RF_0838 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 884506 | 1683 | + | 0.246583 |
| NA | RF_0393 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 416806 | 243 | + | 0.304527 |
| NA | RF_0930 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 990157 | 954 | + | 0.333333 |
| NA | RF_0931 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 991185 | 243 | + | 0.304527 |
| NA | RF_1058 | Excinuclease ABC, C subunit, N-terminal | SubName: Full=Excinuclease ABC, C subunit, N-terminal; | chromosome | CDS | 1119972 | 303 | - | 0.30363 |
| NA | RF_1195 | ABC-type transport systems periplasmic component | SubName: Full=ABC-type transport systems periplasmic component; | chromosome | CDS | 1262279 | 1119 | + | 0.319035 |
| NA | RF_0390 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 413539 | 612 | - | 0.357843 |
| NA | RF_0106 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 117804 | 954 | - | 0.333333 |
| NA | RF_1183 | (Di)nucleoside polyphosphate hydrolase | SubName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome | CDS | 1252388 | 564 | - | 0.292553 |
| NA | RF_0545 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 581921 | 768 | - | 0.283854 |
| NA | RF_pd60 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRFdelta | CDS | 31938 | 204 | - | 0.318627 |
| NA | RF_pd63 | unknown | SubName: Full=Uncharacterized protein; | pRFdelta | CDS | 34541 | 576 | - | 0.383681 |
| NA | RF_1071 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1139088 | 243 | - | 0.304527 |
| NA | RF_0597 | Alkylated DNA repair protein | SubName: Full=Alkylated DNA repair protein; | chromosome | CDS | 641501 | 567 | + | 0.301587 |
| NA | RF_1182 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1251375 | 954 | - | 0.33543 |
| NA | RF_0362 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 380508 | 1455 | + | 0.261168 |
| NA | RF_0342 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 362753 | 612 | + | 0.357843 |
| NA | RF_0804 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 852978 | 609 | + | 0.262726 |
| NA | RF_p30 | Transposase | SubName: Full=Transposase; | pRF | CDS | 30449 | 753 | + | 0.341301 |
| NA | RF_p63 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 58107 | 576 | - | 0.383681 |
| NA | RF_p58 | Transposase | SubName: Full=Transposase; | pRF | CDS | 54457 | 300 | - | 0.34 |
| NA | RF_1072 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1139405 | 753 | - | 0.338645 |
| NA | RF_0967 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1024520 | 216 | - | 0.337963 |
| NA | RF_0975 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1034014 | 612 | + | 0.357843 |
| NA | RF_0976 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1034600 | 444 | + | 0.367117 |
| NA | RF_1008 | Endo/excinuclease amino terminal domain protein | SubName: Full=Endo/excinuclease amino terminal domain protein; | chromosome | CDS | 1069305 | 435 | - | 0.294253 |
| NA | RF_0881 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 937698 | 954 | - | 0.33543 |
| NA | RF_1350 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1437005 | 954 | - | 0.257862 |
| NA | RF_p57 | Transposase | SubName: Full=Transposase; | pRF | CDS | 53723 | 738 | - | 0.334688 |
| NA | RF_0263 | ATP-dependent RNA helicase RhlE | SubName: Full=ATP-dependent RNA helicase RhlE; | chromosome | CDS | 292119 | 237 | + | 0.337553 |
| NA | RF_p53 | DNA polymerase III, epsilon subunit-like protein | SubName: Full=DNA polymerase III, epsilon subunit-like protein; | pRF | CDS | 49641 | 543 | - | 0.333333 |
| NA | RF_0972 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1030734 | 1314 | + | 0.291476 |
| NA | RF_0855 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 905899 | 1749 | - | 0.296741 |
| NA | RF_0688 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 735570 | 1317 | + | 0.301443 |
| NA | RF_0880 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 937381 | 243 | - | 0.312757 |
| NA | RF_0065 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 66725 | 921 | + | 0.331162 |
| NA | RF_0921 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 982748 | 243 | + | 0.304527 |
| NA | RF_0978 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1035905 | 252 | - | 0.31746 |
| NA | RF_0437 | Transposition helper protein, OrfB | SubName: Full=Transposition helper protein, OrfB; | chromosome | CDS | 463717 | 801 | + | 0.36829 |
| NA | RF_0400 | DnaA-like protein | SubName: Full=DnaA-like protein; | chromosome | CDS | 420889 | 669 | - | 0.233184 |
| NA | RF_0914 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 976393 | 258 | - | 0.271318 |
| NA | RF_0321 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 337153 | 243 | + | 0.304527 |
| NA | RF_0424 | Excinuclease ABC, C subunit, N-terminal | SubName: Full=Excinuclease ABC, C subunit, N-terminal; | chromosome | CDS | 451474 | 273 | + | 0.260073 |
| NA | RF_0138 | Site-specific DNA methylase | RecName: Full=Cytosine-specific methyltransferase; EC=2.1.1.37; | chromosome | CDS | 154861 | 318 | - | 0.327044 |
| NA | RF_0051 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 52458 | 444 | - | 0.367117 |
| NA | RF_0159 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 175561 | 243 | + | 0.312757 |
| NA | RF_0588 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 628603 | 954 | - | 0.333333 |
| NA | RF_pd67 | Transposase | SubName: Full=Transposase; | pRFdelta | CDS | 37605 | 180 | + | 0.272222 |
| NA | RF_0320 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 336125 | 954 | + | 0.33543 |
| NA | RF_0915 | Methylated-DNA--protein-cysteinemethyltransferase | SubName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; | chromosome | CDS | 977066 | 1056 | - | 0.349432 |
| NA | RF_p34 | DNA polymerase III, epsilon subunit-like protein | SubName: Full=DNA polymerase III, epsilon subunit-like protein; | pRF | CDS | 33232 | 1134 | - | 0.323633 |
| NA | RF_0712 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 771038 | 1257 | + | 0.292761 |
| NA | RF_0137 | Site-specific DNA methylase | SubName: Full=Site-specific DNA methylase; | chromosome | CDS | 154251 | 516 | - | 0.317829 |
| NA | RF_0999 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1060948 | 243 | + | 0.304527 |
| NA | RF_pd66 | Site-specific recombinases | SubName: Full=Site-specific recombinases; | pRFdelta | CDS | 36726 | 549 | + | 0.338798 |
| NA | RF_1340 | Uracil-DNA glycosylase, family 4 | SubName: Full=Uracil-DNA glycosylase, family 4; EC=3.2.2.-; | chromosome | CDS | 1426418 | 789 | - | 0.35488 |
| NA | RF_1351 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1437968 | 639 | - | 0.244131 |
| NA | RF_0359 | Site-specific recombinases | SubName: Full=Site-specific recombinases; | chromosome | CDS | 376272 | 1584 | + | 0.285985 |
| NA | RF_0306 | Transposition helper protein, OrfB | SubName: Full=Transposition helper protein, OrfB; | chromosome | CDS | 321311 | 801 | - | 0.36829 |
| NA | RF_0101 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 114492 | 753 | + | 0.341301 |
| NA | RF_p15 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 13287 | 786 | - | 0.358779 |
| NA | RF_1136 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1204059 | 849 | + | 0.29682 |
| NA | RF_1181 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1251058 | 243 | - | 0.312757 |
| NA | RF_0977 | Transposition helper protein, OrfB | SubName: Full=Transposition helper protein, OrfB; | chromosome | CDS | 1035040 | 801 | + | 0.36829 |
| NA | RF_0436 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 463277 | 444 | + | 0.367117 |
| NA | RF_0344 | Transposition helper protein, OrfB | SubName: Full=Transposition helper protein, OrfB; | chromosome | CDS | 363779 | 801 | + | 0.36829 |
| NA | RF_pd39 | Conjugative transfer protein TraA_Ti | SubName: Full=Conjugative transfer protein TraA_Ti; | pRFdelta | CDS | 13286 | 2724 | + | 0.381791 |
| NA | RF_1211 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1272684 | 204 | - | 0.220588 |
| NA | RF_0946 | Excinuclease ABC, C subunit, N-terminal | SubName: Full=Excinuclease ABC, C subunit, N-terminal; | chromosome | CDS | 1004592 | 261 | - | 0.283525 |
| NA | RF_0865 | N6-adenine-specific methylase | SubName: Full=N6-adenine-specific methylase; | chromosome | CDS | 919810 | 591 | + | 0.316413 |
| NA | RF_pd55 | Transposase | SubName: Full=Transposase; | pRFdelta | CDS | 27405 | 507 | - | 0.329389 |
| NA | RF_0850 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 899124 | 1926 | - | 0.288681 |
| NA | RF_0308 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 322526 | 612 | - | 0.357843 |
| NA | RF_0343 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 363339 | 444 | + | 0.367117 |
| NA | RF_0926 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 986311 | 243 | - | 0.300412 |
| NA | RF_0174 | ATP-dependent helicase | SubName: Full=ATP-dependent helicase; | chromosome | CDS | 193206 | 2448 | - | 0.3125 |
| NA | RF_0920 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 981720 | 954 | + | 0.333333 |
| NA | RF_p64 | Transposase | SubName: Full=Transposase; | pRF | CDS | 58768 | 309 | + | 0.294498 |
| NA | RF_0264 | ATP-dependent RNA helicase RhlE | SubName: Full=ATP-dependent RNA helicase RhlE; | chromosome | CDS | 292303 | 1062 | + | 0.336158 |
| NA | RF_0050 | Transposition helper protein, OrfB | SubName: Full=Transposition helper protein, OrfB; | chromosome | CDS | 51661 | 801 | - | 0.36829 |
| NA | RF_pd53 | DNA polymerase III, epsilon subunit-like protein | SubName: Full=DNA polymerase III, epsilon subunit-like protein; | pRFdelta | CDS | 26075 | 543 | - | 0.333333 |
| NA | RF_0165 | Superfamily I DNA and RNA helicase | SubName: Full=Superfamily I DNA and RNA helicase; | chromosome | CDS | 181625 | 3087 | + | 0.302235 |
| NA | RF_1392 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1476089 | 243 | - | 0.312757 |
| NA | RF_pd57 | Transposase | SubName: Full=Transposase; | pRFdelta | CDS | 30157 | 738 | - | 0.334688 |
| NA | RF_0105 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 117487 | 243 | - | 0.312757 |
| NA | RF_1393 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1476406 | 954 | - | 0.33543 |
| NA | RF_pd48 | Transposase | SubName: Full=Transposase; | pRFdelta | CDS | 22835 | 870 | - | 0.351724 |
| NA | RF_1140 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1209433 | 243 | + | 0.308642 |
| NA | RF_0998 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1059920 | 954 | + | 0.336478 |
| NA | RF_0158 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 174533 | 954 | + | 0.33543 |
| NA | RF_0388 | Transposition helper protein, OrfB | SubName: Full=Transposition helper protein, OrfB; | chromosome | CDS | 412324 | 801 | - | 0.36829 |
| NA | RF_0049 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 51062 | 582 | + | 0.328179 |
| NA | RF_0041 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 42136 | 2256 | - | 0.247784 |
| NA | RF_pd54 | Transposase | SubName: Full=Transposase; | pRFdelta | CDS | 26644 | 693 | - | 0.329004 |
| NA | RF_p19 | unknown | SubName: Full=Uncharacterized protein; | pRF | CDS | 17327 | 1191 | - | 0.342569 |
| NA | RF_0102 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 115319 | 162 | + | 0.290123 |
| NA | RF_p55 | Transposase | SubName: Full=Transposase; | pRF | CDS | 50971 | 507 | - | 0.329389 |
| NA | RF_pd64 | Transposase | SubName: Full=Transposase; | pRFdelta | CDS | 35202 | 309 | + | 0.294498 |
| NA | RF_1139 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1208405 | 954 | + | 0.333333 |
| NA | RF_0551 | Putative lyase | SubName: Full=Putative lyase; | chromosome | CDS | 588483 | 876 | - | 0.317352 |
| NA | RF_1375 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 1463280 | 465 | - | 0.32043 |
| NA | RF_p66 | Site-specific recombinases | SubName: Full=Site-specific recombinases; | pRF | CDS | 60292 | 549 | + | 0.338798 |
| NA | RF_0535 | Conserved hypothetical protein | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome | CDS | 571708 | 465 | + | 0.31828 |
| NA | RF_0389 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 413121 | 444 | - | 0.367117 |
| NA | RF_1204 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 1268717 | 954 | + | 0.333333 |
| NA | RF_0435 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 462691 | 612 | + | 0.359477 |
| NA | RF_0587 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 628286 | 243 | - | 0.304527 |
| NA | RF_0307 | Transposase | SubName: Full=Transposase; | chromosome | CDS | 322108 | 444 | - | 0.367117 |
| NA | RF_0199 | unknown | SubName: Full=Uncharacterized protein; | chromosome | CDS | 215882 | 285 | + | 0.263158 |
| NA | RF_p48 | Transposase | SubName: Full=Transposase; | pRF | CDS | 46401 | 870 | - | 0.351724 |
| NA | RF_p60 | hypothetical protein | SubName: Full=Uncharacterized protein; | pRF | CDS | 55504 | 204 | - | 0.318627 |
| dam | RF_0123 | Site-specific DNA adenine methylase | SubName: Full=Site-specific DNA adenine methylase; EC=2.1.1.72; | chromosome | CDS | 141399 | 900 | + | 0.321111 |
| dat | RF_0916 | Methylated-DNA--protein-cysteinemethyltransferase | SubName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; | chromosome | CDS | 978211 | 507 | - | 0.339251 |
| dinJ | RF_1373 | DNA-damage-inducible protein J | SubName: Full=DNA-damage-inducible protein J; | chromosome | CDS | 1461306 | 264 | + | 0.382576 |
| dnaA | RF_0364 | Chromosomal replication initiator protein DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome | CDS | 382683 | 1392 | - | 0.338362 |
| dnaB | RF_0860 | Replicative DNA helicase | RecName: Full=Replicative DNA helicase; EC=3.6.4.12; | chromosome | CDS | 912865 | 1485 | + | 0.33468 |
| dnaE | RF_1244 | DNA polymerase III alpha chain | RecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; | chromosome | CDS | 1310602 | 3624 | - | 0.355684 |
| dnaG | RF_1358 | DNA primase | RecName: Full=DNA primase; EC=2.7.7.-; | chromosome | CDS | 1448827 | 1788 | - | 0.302573 |
| dnaN | RF_0649 | DNA polymerase III beta chain | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome | CDS | 696880 | 1140 | + | 0.320175 |
| dnaQ | RF_0176 | DNA polymerase III epsilon chain | RecName: Full=DNA polymerase III subunit epsilon; EC=2.7.7.7; | chromosome | CDS | 196606 | 690 | - | 0.342029 |
| dnaX | RF_1364 | DNA polymerase III gamma and tau chains | SubName: Full=DNA polymerase III gamma and tau chains; EC=2.7.7.7; | chromosome | CDS | 1454420 | 1566 | + | 0.311622 |
| dprA | RF_0531 | Putatie DNA processing protein DprA | SubName: Full=Putatie DNA processing protein DprA; | chromosome | CDS | 566795 | 1149 | - | 0.334204 |
| gyrA | RF_1055 | DNA gyrase subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome | CDS | 1113461 | 2721 | - | 0.385153 |
| gyrB | RF_0947 | DNA gyrase subunit B | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome | CDS | 1004956 | 2427 | - | 0.372888 |
| himA | RF_0201 | Integration host factor alpha-subunit | RecName: Full=Histone-like DNA-binding protein; | chromosome | CDS | 216818 | 288 | + | 0.263889 |
| himD | RF_0767 | Integration host factor beta-subunit | SubName: Full=Integration host factor beta-subunit; | chromosome | CDS | 824822 | 243 | + | 0.27572 |
| holA | RF_1078 | DNA polymerase III, delta subunit | SubName: Full=DNA polymerase III, delta subunit; | chromosome | CDS | 1145074 | 966 | - | 0.26294 |
| holB | RF_1107 | DNA polymerase III delta subunit | SubName: Full=DNA polymerase III delta subunit; EC=2.7.7.7; | chromosome | CDS | 1176477 | 795 | - | 0.264151 |
| hupA | RF_1108 | DNA-binding protein HU | RecName: Full=DNA-binding protein HU; | chromosome | CDS | 1177570 | 333 | - | 0.321321 |
| ligA | RF_0192 | DNA ligase, NAD-dependent | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome | CDS | 208171 | 2121 | + | 0.351249 |
| mfd | RF_0367 | Transcription-repair coupling factor | RecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; | chromosome | CDS | 384963 | 3429 | + | 0.324876 |
| mpg | RF_0560 | DNA-3-methyladenine glycosidase | RecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; | chromosome | CDS | 599076 | 534 | - | 0.353933 |
| mutL | RF_1387 | DNA mismatch repair protein MutL | RecName: Full=DNA mismatch repair protein MutL; | chromosome | CDS | 1471875 | 1830 | - | 0.356831 |
| mutM | RF_0242 | Formamidopyrimidine-DNA glycosidase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome | CDS | 269457 | 831 | - | 0.305656 |
| mutS | RF_0483 | DNA mismatch repair protein MutS | RecName: Full=DNA mismatch repair protein MutS; | chromosome | CDS | 516886 | 2661 | - | 0.337091 |
| nth | RF_1191 | Endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome | CDS | 1258940 | 642 | + | 0.323988 |
| nudH | RF_1051 | (Di)nucleoside polyphosphate hydrolase | RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome | CDS | 1110575 | 486 | + | 0.353909 |
| parC | RF_0107 | Topoisomerase IV subunit A | RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; | chromosome | CDS | 118779 | 2214 | - | 0.366305 |
| parE | RF_0988 | DNA topoisomerase IV, B subunit | RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; | chromosome | CDS | 1048243 | 1989 | + | 0.339869 |
| polA | RF_1239 | DNA polymerase I (POL I) | RecName: Full=DNA polymerase I; Short=POL I; EC=2.7.7.7; | chromosome | CDS | 1303312 | 2769 | + | 0.344529 |
| priA | RF_0858 | Primosomal protein N' | RecName: Full=Primosomal protein N; EC=3.6.4.-; AltName: Full=ATP-dependent helicase PriA; | chromosome | CDS | 910034 | 1947 | - | 0.333847 |
| radC | RF_1310 | DNA repair protein RadC | SubName: Full=DNA repair protein RadC; | chromosome | CDS | 1398522 | 468 | + | 0.301282 |
| recA | RF_1221 | RecA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome | CDS | 1285898 | 1032 | + | 0.386628 |
| recF | RF_0035 | DNA replication and repair protein RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome | CDS | 36903 | 1263 | - | 0.325416 |
| recG | RF_0378 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; | chromosome | CDS | 399211 | 2124 | + | 0.373823 |
| recJ | RF_0763 | Single-stranded-DNA-specific exonuclease RecJ | SubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; | chromosome | CDS | 818476 | 1764 | + | 0.336168 |
| recN | RF_1089 | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome | CDS | 1156040 | 1641 | + | 0.330286 |
| recO | RF_0868 | DNA repair protein RecO | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome | CDS | 922291 | 714 | + | 0.277311 |
| recR | RF_0672 | Recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome | CDS | 719650 | 624 | + | 0.346154 |
| relB1 | RF_0335 | DNA-damage-inducible protein J | SubName: Full=DNA-damage-inducible protein J; | chromosome | CDS | 354668 | 261 | - | 0.348659 |
| relB2 | RF_0827 | DNA-damage-inducible protein J | SubName: Full=DNA-damage-inducible protein J; | chromosome | CDS | 874049 | 273 | - | 0.318681 |
| rnhA | RF_0180 | Ribonuclease H | RecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; | chromosome | CDS | 200109 | 459 | + | 0.337691 |
| rnhB | RF_1061 | Ribonuclease HII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome | CDS | 1122962 | 582 | - | 0.331615 |
| ruvA | RF_0604 | Holliday junction DNA helicase RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome | CDS | 646715 | 612 | + | 0.341503 |
| ruvB | RF_0606 | Holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome | CDS | 648360 | 1029 | + | 0.377065 |
| ruvC | RF_1173 | Crossover junction endodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome | CDS | 1244603 | 471 | - | 0.37155 |
| sca2 | RF_0067 | Cell surface antigen Sca2 | RecName: Full=Putative surface cell antigen sca2; Flags: Precursor; | chromosome | CDS | 68331 | 4815 | - | 0.30135 |
| ssb | RF_1325 | Single-stranded DNA-binding protein | RecName: Full=Single-stranded DNA-binding protein; Short=SSB; | chromosome | CDS | 1411431 | 459 | + | 0.342048 |
| tatD | RF_0236 | Putative deoxyribonuclease, hydrolase | SubName: Full=Putative deoxyribonuclease, hydrolase; EC=3.1.21.-; | chromosome | CDS | 263371 | 873 | + | 0.34937 |
| tnpR | RF_p32 | TnpR resolvase | SubName: Full=TnpR resolvase; | pRF | CDS | 32042 | 441 | + | 0.378685 |
| topA | RF_0530 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; AltName: Full=Omega-protein; AltName: Full=Relaxing enzyme; AltName: Full=Swivelase; AltName: Full=Untwisting enzyme; | chromosome | CDS | 564265 | 2331 | - | 0.350493 |
| uvrA | RF_1324 | Excinuclease ABC subunit A | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome | CDS | 1408459 | 2868 | - | 0.359484 |
| uvrB | RF_1060 | Excinuclease ABC subunit B | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome | CDS | 1120812 | 1986 | + | 0.383686 |
| uvrC | RF_0912 | Excinuclease ABC subunit C | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome | CDS | 973615 | 1929 | - | 0.355625 |
| uvrD | RF_0687 | DNA helicase II | RecName: Full=Probable DNA helicase II homolog; EC=3.6.4.12; | chromosome | CDS | 733515 | 1965 | + | 0.339949 |
| xerC | RF_1295 | Tyrosine recombinase XerC | RecName: Full=Tyrosine recombinase XerC; | chromosome | CDS | 1379060 | 918 | - | 0.301743 |
| xerD | RF_0571 | Tyrosine recombinase XerD | RecName: Full=Tyrosine recombinase XerD; | chromosome | CDS | 607594 | 921 | + | 0.326819 |
| xseA | RF_0253 | Exodeoxyribonuclease VII, large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; | chromosome | CDS | 280857 | 1389 | - | 0.318215 |
| xseB | RF_0557 | Exodeoxyribonuclease VII small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome | CDS | 597824 | 243 | + | 0.325103 |
| xth1 | RF_1021 | Exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; | chromosome | CDS | 1081982 | 804 | - | 0.329602 |
| xth2 | RF_0250 | Exodeoxyribonuclease III | SubName: Full=Exodeoxyribonuclease III; EC=3.1.11.2; | chromosome | CDS | 278385 | 783 | - | 0.295019 |
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