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2024-04-29 01:22:10

Gene list

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COG category: Replication, recombination and repair
Organism: Xanthomonas campestris pv. campestris str. 8004, 8004

Number of genes found: 258

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Xanthomonas campestris pv. campestris str. 8004, 8004
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA XC_2804 replicative DNA helicasechromosome CDS3374150 1431 - 0.626136
NA XC_2292 IS1478 transposasechromosome CDS2759130 1575 + 0.633016
NA XC_3161 excinuclease ABC subunit Achromosome CDS3786951 2586 - 0.67208
NA XC_3838 conserved hypothetical proteinchromosome CDS4536747 279 - 0.688172
NA XC_2343 putative single stranded DNA exonucleasechromosome CDS2832536 1749 - 0.687822
NA XC_0144 IS1480 transposasechromosome CDS183762 519 - 0.56262
NA XC_0137 IS1478 transposasechromosome CDS169557 1425 + 0.633684
NA XC_1162 DNA helicasechromosome CDS1401404 1803 - 0.674986
NA XC_2509 RecA proteinchromosome CDS3038998 1032 - 0.637597
NA XC_2435 conserved hypothetical proteinchromosome CDS2948884 558 + 0.573477
NA XC_3918 ISxcc1 transposasechromosome CDS4624199 267 - 0.573034
NA XC_3391 exodeoxyribonuclease IXchromosome CDS4043035 999 + 0.686687
NA XC_2011 IS1477 transposasechromosome CDS2423412 834 + 0.630695
NA XC_3105 IS1478 transposasechromosome CDS3718561 1368 + 0.638889
NA XC_0533 ribonucleasechromosome CDS630136 1035 - 0.694686
NA XC_3094 excinuclease ABC subunit Achromosome CDS3705762 2967 + 0.640715
NA XC_2064 putative DNA topoisomerase IIIchromosome CDS2477040 2013 - 0.641331
NA XC_2065 single-stranded DNA binding proteinchromosome CDS2479332 441 - 0.614512
NA XC_2186 exodeoxyribonuclease IIIchromosome CDS2632800 1071 - 0.640523
NA XC_1684 excinuclease ABC subunit C homologchromosome CDS2023229 858 - 0.645688
NA XC_1378 single-stranded DNA binding proteinchromosome CDS1664777 519 + 0.660886
NA XC_4288 exodeoxyribonuclease V beta chainchromosome CDS5081732 4119 - 0.713766
NA XC_1211 ISxac3 transposasechromosome CDS1473169 294 + 0.612245
NA XC_2623 IS1477 transposasechromosome CDS3161321 834 - 0.629496
NA XC_1628 excinuclease ABC subunit Bchromosome CDS1953215 2022 + 0.628091
NA XC_2612 RadC family proteinchromosome CDS3151646 480 - 0.6375
NA XC_0698 IS1404 transposasechromosome CDS837685 987 + 0.612969
NA XC_3524 conserved hypothetical proteinchromosome CDS4185393 369 + 0.701897
NA XC_0501 NADH pyrophosphatasechromosome CDS589625 900 + 0.681111
NA XC_2395 IS1477 transposasechromosome CDS2887561 267 - 0.588015
NA XC_2597 ISxac3 transposasechromosome CDS3136295 294 + 0.612245
NA XC_2366 conserved hypothetical proteinchromosome CDS2856460 552 - 0.693841
NA XC_0034 conserved hypothetical proteinchromosome CDS44887 1185 + 0.667511
NA XC_1800 3-methyladenine DNA glycosylasechromosome CDS2188616 624 - 0.650641
NA XC_0927 IS1404 transposasechromosome CDS1110811 816 + 0.610294
NA XC_3206 conserved hypothetical proteinchromosome CDS3844530 468 + 0.645299
NA XC_3166 conserved hypothetical proteinchromosome CDS3793611 645 - 0.706977
NA XC_0225 conserved hypothetical proteinchromosome CDS271800 2502 + 0.61311
NA XC_2593 IS1404 transposasechromosome CDS3131432 270 + 0.581481
NA XC_2007 IS1478 transposasechromosome CDS2420596 1515 - 0.634323
NA XC_2598 ISxac3 transposasechromosome CDS3136606 855 + 0.605848
NA XC_2601 invertase/recombinase proteinchromosome CDS3138573 567 + 0.661376
NA XC_0702 IS1478 transposasechromosome CDS844579 1542 + 0.628405
NA XC_1212 ISxac3 transposasechromosome CDS1473507 828 + 0.607488
NA XC_3908 IS1478 transposasechromosome CDS4614209 1425 + 0.633684
NA XC_0909 IS1480 transposasechromosome CDS1091768 519 + 0.566474
NA XC_3825 DNA topoisomerase Ichromosome CDS4520527 2496 + 0.635817
NA XC_0003 DNA replication and repair RecF proteinchromosome CDS3633 1107 + 0.654923
NA XC_3244 DNA polymerase III tau and gamma subunitschromosome CDS3887894 1962 - 0.683486
NA XC_2209 ATPasechromosome CDS2658398 1287 - 0.648019
NA XC_4280 IS1481 transposasechromosome CDS5072963 519 + 0.622351
NA XC_3149 conserved hypothetical proteinchromosome CDS3767017 1419 - 0.699084
NA XC_1524 IS1478 transposasechromosome CDS1833105 1368 + 0.638889
NA XC_3967 DNA polymerase-related proteinchromosome CDS4684816 660 + 0.689394
NA XC_0590 IS1478 transposasechromosome CDS706973 1425 + 0.633684
NA XC_3921 ISxac3 transposasechromosome CDS4626656 279 - 0.620072
NA XC_2783 IS1477 transposasechromosome CDS3344677 1053 + 0.641026
NA XC_2784 IS1478 transposasechromosome CDS3345860 1425 + 0.633684
NA XC_2029 putative DNA repair protein RadCchromosome CDS2443947 495 - 0.589899
NA XC_0133 IS1479 transposasechromosome CDS162213 981 - 0.619776
NA XC_2134 IS1480 transposasechromosome CDS2559961 519 + 0.574181
NA XC_3256 ribonuclease Hchromosome CDS3898212 453 - 0.657837
NA XC_2626 IS1404 transposasechromosome CDS3163161 759 + 0.612648
NA XC_2986 IS1478 transposasechromosome CDS3579168 1425 + 0.633684
NA XC_2440 conserved hypothetical proteinchromosome CDS2953180 729 - 0.532236
NA XC_3624 ISxcC1 transposasechromosome CDS4304341 768 + 0.601562
NA XC_0004 DNA gyrase subunit Bchromosome CDS4853 2445 + 0.649898
NA XC_1332 DNA transport competence proteinchromosome CDS1618596 333 + 0.567568
NA XC_4115 DNA helicase IIchromosome CDS4846747 2187 - 0.659808
NA XC_2149 succinoglycan biosynthesis proteinchromosome CDS2577542 696 - 0.652299
NA XC_3672 IS1404 transposasechromosome CDS4359133 846 + 0.618203
NA XC_1416 transcription-repair coupling factorchromosome CDS1708793 3468 - 0.662341
NA XC_1054 IS1478 transposasechromosome CDS1269226 1518 + 0.629117
NA XC_3920 ISxac3 transposasechromosome CDS4625784 819 - 0.610501
NA XC_1355 histone-like proteinchromosome CDS1639624 423 - 0.647754
NA XC_2595 conserved hypothetical proteinchromosome CDS3132728 186 + 0.526882
NA XC_2394 IS1477 transposasechromosome CDS2886695 1053 - 0.626781
NA XC_1024 chromosome misc_feature1241824 237 - 0.582278
NA XC_0001 chromosomal replication initiatorchromosome CDS42 1329 + 0.656132
NA XC_0285 ATP-dependent RNA helicasechromosome CDS338123 2511 - 0.719634
NA XC_1808 ATP-dependent DNA ligasechromosome CDS2195931 2550 + 0.661176
NA XC_1643 IS1479 transposasechromosome CDS1971160 981 + 0.620795
NA XC_2220 7, 8-dihydro-8-oxoguanine-triphosphatasechromosome CDS2676442 459 + 0.675381
NA XC_0680 ISxac3 transposasechromosome CDS816188 279 + 0.616487
NA XC_2714 ribonuclease Tchromosome CDS3259141 651 + 0.658986
NA XC_1812 exodeoxyribonuclease VII large subunitchromosome CDS2203035 1341 - 0.697987
NA XC_3580 integrase/recombinasechromosome CDS4257574 972 - 0.703704
NA XC_2630 conserved hypothetical proteinchromosome CDS3166188 1125 - 0.569778
NA XC_0403 phage-related integrasechromosome CDS466012 447 + 0.597315
NA XC_4109 DNA polymerase Ichromosome CDS4840113 2784 - 0.687859
NA XC_1018 phage-related integrasechromosome CDS1231170 1890 + 0.577778
NA XC_3150 conserved hypothetical proteinchromosome CDS3768445 603 - 0.716418
NA XC_4239 formamidopyrimidine DNA glycosylasechromosome CDS5018365 816 - 0.628676
NA XC_3821 DNA processing chain Achromosome CDS4516740 1137 + 0.703606
NA XC_1164 ATP dependent RNA helicasechromosome CDS1404200 4116 + 0.679786
NA XC_0681 ISxac3 transposasechromosome CDS816511 828 + 0.608696
NA XC_0968 IS1480 transposasechromosome CDS1161661 519 + 0.564547
NA XC_0224 methyltransferasechromosome CDS270167 1632 + 0.531863
NA XC_3915 IS1404 transposasechromosome CDS4621336 264 - 0.583333
NA XC_2880 DNA polymerase III alpha chainchromosome CDS3460720 3591 + 0.662768
NA XC_2619 phage-related integrasechromosome CDS3157526 996 + 0.565261
NA XC_0926 IS1404 transposasechromosome CDS1110524 264 + 0.583333
NA XC_3035 DNA mismatch repair proteinchromosome CDS3630603 2676 + 0.661435
NA XC_1833 ATP-dependent RNA helicasechromosome CDS2226058 1377 - 0.672476
NA XC_0438 ATP-dependent RNA helicasechromosome CDS519976 1293 - 0.694509
NA XC_1465 DNA methylation and regulatory protein Adachromosome CDS1765949 1464 - 0.704235
NA XC_2785 helicasechromosome CDS3347629 3198 - 0.559725
NA XC_2002 phage-related integrasechromosome CDS2414668 1938 + 0.608875
NA XC_3848 ATP-dependent RNA helicasechromosome CDS4545008 1722 - 0.692799
NA XC_1086 conserved hypothetical proteinchromosome CDS1310215 309 - 0.682848
NA XC_0412 similar to IS1404 transposase ORFAchromosome CDS478755 264 + 0.590909
NA XC_3892 DNA primasechromosome CDS4596831 1749 + 0.656947
NA XC_4233 ISxac3 transposasechromosome CDS5009417 855 + 0.608187
NA XC_1026 IS1404 transposasechromosome CDS1243026 270 - 0.581481
NA XC_3923 IS1479 transposasechromosome CDS4628502 981 + 0.619776
NA XC_3255 DNA polymerase III epsilon chainchromosome CDS3897466 738 - 0.650406
NA XC_1178 ATP-dependent helicasechromosome CDS1428033 2007 + 0.676134
NA XC_2624 IS1477 transposasechromosome CDS3162187 267 - 0.588015
NA XC_3603 DNA repair system specific for alkylated DNAchromosome CDS4283037 606 - 0.650165
NA XC_2689 conserved hypothetical proteinchromosome CDS3234777 2271 - 0.677675
NA XC_0065 conserved hypothetical proteinchromosome CDS79829 840 - 0.569048
NA XC_3698 IS1478 transposasechromosome CDS4384098 1425 + 0.633684
NA XC_2166 conserved hypothetical proteinchromosome CDS2611555 309 - 0.63754
NA XC_4287 exodeoxyribonuclease V alpha chainchromosome CDS5079498 2238 - 0.714477
NA XC_0633 endonucleasechromosome CDS753549 753 + 0.625498
NA XC_1025 IS1404 transposasechromosome CDS1242187 774 - 0.604651
NA XC_2766 recombination protein Nchromosome CDS3323398 1665 + 0.703303
NA XC_2046 plasmid-related proteinchromosome CDS2459407 2307 - 0.628088
NA XC_3623 ISxcc1 transposasechromosome CDS4304000 267 + 0.580524
NA XC_1132 holliday junction resolvase, endodeoxyribonucleasechromosome CDS1374637 525 + 0.678095
NA XC_0492 (di)nucleoside polyphosphate hydrolasechromosome CDS580931 618 + 0.63754
NA XC_2660 DNA gyrase subunit Achromosome CDS3201618 2700 - 0.635556
NA XC_2993 IS1479 transposasechromosome CDS3587991 981 - 0.617737
NA XC_1559 conserved hypothetical proteinchromosome CDS1875535 600 + 0.603333
NA XC_2629 ISxcc1 transposasechromosome CDS3165625 267 - 0.573034
NA XC_2842 topoisomerase IV subunit Achromosome CDS3416769 2244 + 0.653743
NA XC_0545 IS1477 transposase ORFAchromosome CDS652120 267 + 0.629214
NA XC_1955 7, 8-dihydro-8-oxoguanine-triphosphatasechromosome CDS2359647 489 + 0.650307
NA XC_1540 methylated-DNA-protein-cysteine S-methyltransferase related proteinchromosome CDS1848886 399 + 0.694236
NA XC_3924 IS1478 transposasechromosome CDS4629742 1368 - 0.638889
NA XC_1517 exodeoxyribonuclease VII small subunitchromosome CDS1825967 264 - 0.636364
NA XC_3392 MutT-like proteinchromosome CDS4043922 660 + 0.663636
NA XC_3650 DNA polymerase IVchromosome CDS4331296 1080 - 0.653704
NA XC_3693 conserved hypothetical proteinchromosome CDS4380692 483 - 0.693582
NA XC_2628 ISxcC1 transposasechromosome CDS3164783 768 - 0.580729
NA XC_0410 IS1478 transposasechromosome CDS475776 1425 + 0.633684
NA XC_3586 DNA polymerase III holoenzyme chi subunitchromosome CDS4263529 426 + 0.673709
NA XC_1366 conserved hypothetical proteinchromosome CDS1651144 468 + 0.717949
NA XC_2951 DNA ligasechromosome CDS3534276 1605 + 0.677259
NA XC_0721 conserved hypothetical proteinchromosome CDS865912 1065 + 0.709859
NA XC_2997 conserved hypothetical proteinchromosome CDS3593123 429 + 0.624709
NA XC_3065 chromosome misc_feature3669579 255 - 0.552941
NA XC_1679 conserved hypothetical proteinchromosome CDS2017854 630 - 0.68254
NA XC_1464 6-O-methylguanine-DNA methyltransferasechromosome CDS1765410 543 - 0.694291
NA XC_2779 IS1478 transposasechromosome CDS3340580 1425 + 0.633684
NA XC_3622 conserved hypothetical proteinchromosome CDS4303587 123 + 0.593496
NA XC_2625 IS1404 transposasechromosome CDS3162811 270 + 0.585185
NA XC_0536 helicasechromosome CDS634435 2904 + 0.576446
NA XC_4274 integrasechromosome CDS5068712 225 + 0.515556
NA XC_4189 conserved hypothetical proteinchromosome CDS4944677 909 - 0.633663
NA XC_0589 RNA-directed DNA polymerasechromosome CDS705062 1695 + 0.473746
NA XC_0053 conserved hypothetical proteinchromosome CDS67288 966 - 0.695652
NA XC_4135 exodeoxyribonuclease IIIchromosome CDS4872500 780 - 0.669231
NA XC_3917 ISxcC1 transposasechromosome CDS4623357 582 - 0.580756
NA XC_2589 phage-related integrasechromosome CDS3122997 549 + 0.615665
NA XC_1007 aminopeptidasechromosome CDS1220655 279 - 0.666667
NA XC_1034 ISxcc1 transposasechromosome CDS1248522 267 - 0.580524
NA XC_0002 DNA polymerase III beta chainchromosome CDS1646 1101 + 0.645777
NA XC_3671 IS1404 transposasechromosome CDS4358876 264 + 0.587121
NA XC_1475 ATP-dependent RNA helicasechromosome CDS1773724 1929 + 0.687921
NA XC_1266 conserved hypothetical proteinchromosome CDS1555229 252 - 0.670635
NA XC_2618 phage-related integrasechromosome CDS3156052 1449 + 0.592133
NA XC_1362 conserved hypothetical proteinchromosome CDS1646843 1275 - 0.662745
NA XC_3242 recombination protein RecRchromosome CDS3886877 594 - 0.671717
NA XC_2879 ribonuclease HIIchromosome CDS3459761 723 + 0.692946
NA XC_2399 integrase/recombinasechromosome CDS2899536 1410 + 0.608511
NA XC_1694 A/G-specific adenine glycosylasechromosome CDS2033091 1071 - 0.6676
NA XC_2604 IS1477 transposasechromosome CDS3141799 267 - 0.629214
NA XC_1640 conserved hypothetical proteinchromosome CDS1967008 144 - 0.541667
NA XC_0666 ISxac3 transposasechromosome CDS800352 294 - 0.615646
NA XC_2803 photolyase-like proteinchromosome CDS3372441 1455 - 0.670103
NA XC_2083 chromosome misc_feature2500494 381 + 0.606299
NA XC_1641 IS1478 transposasechromosome CDS1967589 1368 + 0.638889
NA XC_2078 YeeB-like proteinchromosome CDS2492116 2100 + 0.560476
NA XC_1925 integration host factor beta subunitchromosome CDS2324861 312 + 0.605769
NA XC_0688 IS1480 transposasechromosome CDS824967 519 - 0.564547
NA XC_1327 replication related proteinchromosome CDS1613949 702 + 0.696581
NA XC_0858 IS1477 transposasechromosome CDS1037980 1053 - 0.642925
NA XC_0906 IS1480 transposasechromosome CDS1088815 519 - 0.564547
NA XC_0947 ATP-dependent DNA helicasechromosome CDS1136662 2142 - 0.693744
NA XC_2536 topoisomerase IV subunit Bchromosome CDS3066290 1905 + 0.647244
NA XC_3735 DNA polymerase related proteinchromosome CDS4421079 1278 - 0.675274
NA XC_2603 IS1477 transposasechromosome CDS3140933 1053 - 0.641026
NA XC_4231 ATP-dependent DNA helicasechromosome CDS5006540 1977 - 0.647446
NA XC_2000 excinuclease ABC subunit Cchromosome CDS2411546 1857 + 0.662897
NA XC_1403 endonuclease Vchromosome CDS1692181 711 - 0.696203
NA XC_3803 ISxac3 transposasechromosome CDS4497453 294 + 0.615646
NA XC_2812 conserved hypothetical proteinchromosome CDS3384332 768 + 0.677083
NA XC_3956 conserved hypothetical proteinchromosome CDS4674645 540 + 0.692593
NA XC_3944 DNA repair proteinchromosome CDS4657051 678 + 0.716814
NA XC_0697 IS1404 transposasechromosome CDS837569 264 + 0.587121
NA XC_1133 holliday junction binding protein, DNA helicasechromosome CDS1375274 585 + 0.692308
NA XC_1031 chromosome misc_feature1246908 786 + 0.657761
NA XC_2012 IS1479 transposasechromosome CDS2424383 981 + 0.617737
NA XC_2966 DNA repair proteinchromosome CDS3550806 726 - 0.690083
NA XC_2426 RNA-directed DNA polymerasechromosome CDS2939736 1188 + 0.526936
NA XC_1407 IS1479 transposasechromosome CDS1696713 981 - 0.621814
NA XC_3251 conserved hypothetical proteinchromosome CDS3893860 750 - 0.696
NA XC_3631 kinasechromosome CDS4311374 2295 - 0.571678
NA XC_2400 DNA helicase related proteinchromosome CDS2900965 5607 - 0.574817
NA XC_2638 phage-related integrasechromosome CDS3175451 1467 - 0.603272
NA XC_1817 DNA mismatch repair proteinchromosome CDS2209466 1875 + 0.6864
NA XC_0664 site-specific recombinasechromosome CDS798113 969 + 0.664603
NA XC_1656 integration host factor alpha chainchromosome CDS1992475 300 + 0.6
NA XC_2622 IS1479 transposasechromosome CDS3160159 981 + 0.619776
NA XC_2124 phage-related proteinchromosome CDS2541789 1089 - 0.594123
NA XC_2010 IS1477 transposasechromosome CDS2423107 273 + 0.578755
NA XC_0546 IS1477 transposase ORFBchromosome CDS652200 1053 + 0.642925
NA XC_0015 conserved hypothetical proteinchromosome CDS16981 1095 + 0.689498
NA XC_0310 type V secretory pathway proteinchromosome CDS367668 807 + 0.66171
NA XC_2778 phage-related integrasechromosome CDS3339234 1308 - 0.569572
NA XC_0520 DNA-binding proteinchromosome CDS616952 273 - 0.626374
NA XC_0109 ATP-dependent DNA ligasechromosome CDS126994 3006 + 0.675316
NA XC_3836 primosomal protein Nchromosome CDS4533548 2109 + 0.720721
NA XC_3804 ISxac3 transposasechromosome CDS4497764 855 + 0.607018
NA XC_1363 DNA-3-methyladenine glycosylase Ichromosome CDS1648114 540 - 0.627778
NA XC_2021 conserved hypothetical proteinchromosome CDS2437359 627 + 0.628389
NA XC_3222 DNA polymerase III delta' subunitchromosome CDS3866884 960 - 0.695833
NA XC_3262 histone-like proteinchromosome CDS3905262 273 - 0.578755
NA XC_4289 exodeoxyribonuclease V gamma chainchromosome CDS5085847 3405 - 0.712775
NA XC_3914 IS1404 transposasechromosome CDS4620497 1026 - 0.612086
NA XC_1032 ISxcc1 transposasechromosome CDS1247680 768 - 0.582031
NA XC_2086 DNA helicase related proteinchromosome CDS2502709 6471 - 0.647041
NA XC_1478 IS1478 transposasechromosome CDS1779066 1425 - 0.633684
NA XC_2702 endonuclease IIIchromosome CDS3247188 684 + 0.638889
NA XC_3844 uracil-DNA glycosylasechromosome CDS4541726 726 - 0.668044
NA XC_2683 exodeoxyribonuclease Ichromosome CDS3229062 1446 + 0.661134
NA XC_1136 holliday junction binding protein, DNA helicasechromosome CDS1379129 1041 + 0.678194
NA XC_2063 DNA methyltransferasechromosome CDS2474967 1539 - 0.651722
NA XC_0859 IS1477 transposase ORFAchromosome CDS1038846 267 - 0.629214
NA XC_2664 DNA ligasechromosome CDS3207408 2502 - 0.666267
NA XC_2421 phage-related integrasechromosome CDS2931121 1143 + 0.551181
NA XC_0355 site-specific recombinasechromosome CDS413830 984 + 0.670732
NA XC_4038 ATP-dependent helicasechromosome CDS4753072 2136 - 0.674157
NA XC_1226 ADP compounds hydrolasechromosome CDS1500817 558 + 0.668459
NA XC_3930 exodeoxyribonuclease IIIchromosome CDS4644505 801 - 0.646692
NA XC_0869 IS1478 transposasechromosome CDS1047677 1425 + 0.633684
NA XC_3148 DNA polymerase III alpha chainchromosome CDS3763470 3195 - 0.671987
NA XC_3643 ATP-dependent RNA helicasechromosome CDS4325806 1389 + 0.689705
NA XC_3112 DNA-3-methyladenine glycosylasechromosome CDS3724021 642 - 0.679128
NA XC_1499 DNA polymerase III delta subunitchromosome CDS1805131 1029 + 0.691934
NA XC_2423 conserved hypothetical proteinchromosome CDS2934675 3444 + 0.585947
NA XC_0413 similar to IS1404 transposase ORFBchromosome CDS479042 816 + 0.615196
NA XC_1722 conserved hypothetical proteinchromosome CDS2082307 624 + 0.724359
NA XC_3034 IS1595 transposasechromosome CDS3628781 924 - 0.614719
NA XC_4232 ISxac3 transposasechromosome CDS5009127 273 + 0.619048
NA XC_0665 ISxac3 transposasechromosome CDS799480 855 - 0.607018
NA XC_2084 Tn5041 transposasechromosome CDS2499638 897 - 0.567447