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2024-05-17 04:00:10

Gene list

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COG category: Replication, recombination and repair
Organism: Dehalococcoides ethenogenes 195, 195

Number of genes found: 99

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Dehalococcoides ethenogenes 195, 195
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA DET1379 auxin-responsive GH3 protein homolog, putativeSubName: Full=Auxin-responsive GH3 protein homolog, putative; chromosome CDS1244430 1632 + 0.496936
NA DET1195 DNA mismatch repair protein, MutL/HexB familyRecName: Full=DNA mismatch repair protein MutL; chromosome CDS1089265 1701 - 0.516755
NA DET1096 SNF2 domain proteinSubName: Full=SNF2 domain protein; chromosome CDS996743 1347 - 0.536006
NA DET0183 ATP-dependent RNA helicase, DEAD/DEAH box familySubName: Full=ATP-dependent RNA helicase, DEAD/DEAH box family; chromosome CDS175537 1683 + 0.540701
NA DET0850 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS779169 552 + 0.483696
NA DET0066 DNA methylaseSubName: Full=DNA methylase; chromosome CDS61934 1236 - 0.515372
NA DET0392 AP endonuclease, family 2 proteinSubName: Full=AP endonuclease, family 2 protein; chromosome CDS372979 831 - 0.516245
NA DET0276 DNA primase domain proteinSubName: Full=DNA primase domain protein; chromosome CDS264670 2607 + 0.507096
NA DET0572 DNA repair protein, RadC familySubName: Full=DNA repair protein, RadC family; chromosome CDS524903 669 + 0.527653
NA DET0585 DNA polymerase III, gamma and tau subunits, putativeSubName: Full=DNA polymerase III, gamma and tau subunits, putative; chromosome CDS536038 1680 - 0.497024
NA DET0011 DNA polymerase IV, putativeRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS12471 1173 - 0.524297
NA DET0165 ISDet2, transposase orfASubName: Full=ISDet2, transposase orfA; chromosome CDS159891 267 + 0.505618
NA DET0934 hydrolase, TatD familySubName: Full=Hydrolase, TatD family; chromosome CDS855484 795 + 0.509434
NA DET0074 DNA-dependent DNA polymerase, family ASubName: Full=DNA-dependent DNA polymerase, family A; chromosome CDS70995 1941 - 0.528593
NA DET1069 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS971350 1560 - 0.482051
NA DET0549 exonuclease SbcC, putativeSubName: Full=Exonuclease SbcC, putative; chromosome CDS503356 2580 - 0.483721
NA DET1508 ISDet3, transposase orfASubName: Full=ISDet3, transposase orfA; chromosome CDS1362455 279 + 0.469534
NA DET0272 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS262087 960 - 0.430208
NA DET0155 resolvase domain proteinSubName: Full=Resolvase domain protein; chromosome CDS149100 1533 - 0.50424
NA DET0083 ISDet1, transposase orfASubName: Full=ISDet1, transposase orfA; chromosome CDS81781 267 - 0.501873
NA DET0025 competence protein ComEA, putativeSubName: Full=Competence protein ComEA, putative; chromosome CDS23427 501 - 0.500998
NA DET0887 resolvase domain proteinSubName: Full=Resolvase domain protein; chromosome CDS815014 636 + 0.484277
NA DET1309 ATPase, AAA familySubName: Full=ATPase, AAA family; chromosome CDS1191868 1374 - 0.516739
NA DET0166 ISDet2, transposase orfBSubName: Full=ISDet2, transposase orfB; chromosome CDS160181 825 + 0.526061
NA DET1474 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS1333144 1161 - 0.46081
NA DET0076 resolvase domain proteinSubName: Full=Resolvase domain protein; chromosome CDS75226 618 + 0.459547
NA DET0883 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS809291 1308 + 0.41896
NA DET0189 methyltransferase, putativeSubName: Full=Methyltransferase, putative; chromosome CDS184012 579 + 0.500864
NA DET1092 DNA methylaseSubName: Full=DNA methylase; chromosome CDS993620 1266 - 0.536335
NA DET0718 DNA processing protein DprA, putativeSubName: Full=DNA processing protein DprA, putative; chromosome CDS665061 1221 - 0.504505
NA DET1301 ISDet4, transposaseSubName: Full=ISDet4, transposase; chromosome CDS1186642 1242 + 0.466184
NA DET1112 type III restriction-modification system, methylase subunitSubName: Full=Type III restriction-modification system, methylase subunit; chromosome CDS1015763 1764 + 0.441043
NA DET0084 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS82185 291 + 0.43299
NA DET0538 ATP-binding protein, DnaC familySubName: Full=ATP-binding protein, DnaC family; chromosome CDS491369 1281 - 0.516784
NA DET1100 DNA-dependent DNA polymerase, family ASubName: Full=DNA-dependent DNA polymerase, family A; chromosome CDS1001731 1989 - 0.550025
NA DET1462 DNA repair protein, RadC familySubName: Full=DNA repair protein, RadC family; chromosome CDS1318473 816 - 0.517157
NA DET0254 resolvase domain proteinSubName: Full=Resolvase domain protein; chromosome CDS245244 636 + 0.484277
NA DET0051 conserved hypothetical protein TIGR00250RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS44619 402 + 0.512438
NA DET1552 resolvase domain proteinSubName: Full=Resolvase domain protein; chromosome CDS1398114 1665 - 0.463063
NA DET1404 conserved hypothetical protein, truncationSubName: Full=Uncharacterized protein; chromosome CDS1272059 498 + 0.445783
NA DET0581 conserved hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS533267 723 - 0.488243
NA DET0539 dnaD/phage-associated domain proteinSubName: Full=DnaD/phage-associated domain protein; chromosome CDS492705 711 - 0.475387
NA DET0071 SNF2 family helicase, putativeSubName: Full=SNF2 family helicase, putative; chromosome CDS66131 1542 - 0.522049
NA DET1067 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS969361 1557 - 0.520873
NA DET0437 uracil-DNA glycosylase, putativeSubName: Full=Uracil-DNA glycosylase, putative; chromosome CDS413523 570 + 0.522807
NA DET0295 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS284445 960 - 0.430208
NA DET0323 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS307887 1011 - 0.402572
NA DET1095 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS996094 429 - 0.524476
NA DET1476 DNA binding domain, excisionase familySubName: Full=DNA binding domain, excisionase family; chromosome CDS1335264 171 + 0.450292
NA DET1109 helicase domain/SNF2 family domain proteinSubName: Full=Helicase domain/SNF2 family domain protein; chromosome CDS1010792 3228 + 0.475527
NA DET0157 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS151916 705 + 0.521986
NA DET0886 DNA primase domain proteinSubName: Full=DNA primase domain protein; chromosome CDS812082 2607 + 0.507096
NA DET0063 resolvase domain proteinSubName: Full=Resolvase domain protein; chromosome CDS57770 1629 - 0.459791
NA DET0959 Smr domain proteinSubName: Full=Smr domain protein; chromosome CDS877880 303 - 0.485149
NA DET0905 site-specific recombinase, phage integrase familySubName: Full=Site-specific recombinase, phage integrase family; chromosome CDS831857 960 - 0.430208
NA DET1068 site-specific recombinase, phage integrase family, truncationSubName: Full=Site-specific recombinase, phage integrase family, truncation; chromosome CDS970929 417 - 0.494005
NA DET0253 DNA primase domain proteinSubName: Full=DNA primase domain protein; chromosome CDS242312 2607 + 0.507096
NA DET0620 conserved domain proteinSubName: Full=Conserved domain protein; chromosome CDS572520 1140 + 0.481579
NA DET0456 MutT/nudix family proteinSubName: Full=MutT/nudix family protein; chromosome CDS431070 531 - 0.53484
NA DET0047 DNA polymerase III delta subunit-related proteinSubName: Full=DNA polymerase III delta subunit-related protein; chromosome CDS38985 1200 + 0.514167
NA DET1612 DNA repair protein, HhH-GPD familyRecName: Full=Endonuclease III; EC=4.2.99.18; chromosome CDS1444691 663 - 0.499246
NA DET0781 conserved hypothetical protein TIGR00252RecName: Full=UPF0102 protein DET0781; chromosome CDS718422 366 + 0.47541
NA DET0277 resolvase domain proteinSubName: Full=Resolvase domain protein; chromosome CDS267602 636 + 0.484277
dnaA DET0001 chromosomal replication initiator protein DnaARecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS261 1338 + 0.53139
dnaB DET0540 replicative DNA helicaseSubName: Full=Replicative DNA helicase; EC=3.6.1.-; chromosome CDS493412 1377 - 0.508352
dnaE DET1464 DNA polymerase III, alpha subunitSubName: Full=DNA polymerase III, alpha subunit; EC=2.7.7.7; chromosome CDS1319504 3513 - 0.506405
dnaG DET0552 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS507673 1773 - 0.493514
dnaN DET1227 DNA polymerase III, beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1125734 1137 + 0.505717
gyrA DET1630 DNA gyrase, A subunitRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS1458769 2430 - 0.521399
gyrB DET0004 DNA gyrase, B subunitRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS3881 1929 - 0.515293
holB DET0535 DNA polymerase III, delta prime subunitSubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7; chromosome CDS488923 1020 + 0.47549
ligA DET0596 DNA ligase, NAD-dependentRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS545122 2034 - 0.528024
mfd DET1281 transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1166595 3447 - 0.519582
mutM DET1389 formamidopyrimidine-DNA glycosylaseSubName: Full=Formamidopyrimidine-DNA glycosylase; EC=3.2.2.23; chromosome CDS1255053 813 - 0.528905
mutS DET1219 DNA mismatch repair protein MutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS1118939 2577 + 0.514552
nfi DET0569 endonuclease VRecName: Full=Endonuclease V; EC=3.1.21.7; AltName: Full=Deoxyinosine 3endonuclease; AltName: Full=Deoxyribonuclease V; chromosome CDS521809 666 + 0.527027
nth DET0935 endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS856258 657 - 0.464231
ogt DET1460 methylated-DNA--protein-cysteinemethyltransferaseSubName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; chromosome CDS1317526 561 + 0.54902
pcrA DET1196 ATP-dependent DNA helicase PcrASubName: Full=ATP-dependent DNA helicase PcrA; EC=3.6.1.-; chromosome CDS1091057 2217 - 0.511953
polA DET1391 DNA-directed DNA polymerase ISubName: Full=DNA-directed DNA polymerase I; EC=2.7.7.7; chromosome CDS1256490 2712 - 0.504425
priA DET0337 primosomal protein N'SubName: Full=Primosomal protein N; chromosome CDS320720 2448 - 0.513072
recA DET1606 RecARecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1438895 1014 + 0.5
recG DET1268 ATP-dependent DNA helicase RecGSubName: Full=ATP-dependent DNA helicase RecG; EC=3.6.1.-; chromosome CDS1155331 2223 + 0.525416
recJ DET0964 single-stranded-DNA-specific exonuclease RecJSubName: Full=Single-stranded-DNA-specific exonuclease RecJ; EC=3.1.-.-; chromosome CDS882899 1701 + 0.527337
recN DET1055 DNA repair protein RecNRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS955485 1767 + 0.504245
recO DET0580 recombination protein RecORecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS532376 762 - 0.472441
recR DET0583 recombination protein RecRRecName: Full=Recombination protein RecR; chromosome CDS535094 615 - 0.513821
rnhB DET0780 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS717797 636 + 0.542453
ruvA DET0442 Holliday junction DNA helicase RuvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS420444 585 - 0.517949
ruvB DET0606 Holliday junction DNA helicase RuvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS562474 1050 + 0.518095
ruvC DET0443 crossover junction endodeoxyribonuclease RuvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS421030 498 - 0.53012
sbcD DET0788 nuclease SbcCD, D subunitSubName: Full=Nuclease SbcCD, D subunit; chromosome CDS725205 1248 + 0.486378
ssb DET1045 single-strand binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS949381 408 - 0.519608
topA DET0717 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS662943 2112 - 0.477273
uvrA DET0546 excinuclease ABC, A subunitRecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS499589 2841 + 0.517423
uvrB DET0441 excinuclease ABC, B subunitRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS418392 2007 - 0.512706
uvrC DET1216 excinuclease ABC, C subunitRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS1115562 1824 + 0.520833
xerC DET0716 tyrosine recombinase XerCRecName: Full=Tyrosine recombinase XerC; chromosome CDS662019 924 - 0.479437
xerD DET1215 tyrosine recombinase XerDRecName: Full=Tyrosine recombinase XerC; chromosome CDS1114487 909 - 0.50385