TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-19 05:09:32

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Streptococcus thermophilus CNRZ1066, CNRZ1066

Number of genes found: 207

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Streptococcus thermophilus CNRZ1066, CNRZ1066
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA str1036 IS1191, transposase, IS256 family, truncatedchromosome CDS931484 807 + 0.379182
NA str0765 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS722169 219 - 0.347032
NA str1272 IS1193, transposase, ISL3 family, truncatedchromosome CDS1123114 207 + 0.410628
NA str1638 ISSth3, transposase, IS30 family, truncatedchromosome CDS1458646 255 + 0.423529
NA str1858 conserved hypothetical proteinchromosome CDS1655498 957 - 0.3814
NA str1948 conserved hypothetical proteinchromosome CDS1723722 2160 + 0.249537
NA str1552 ISSth2, transposase, IS5 family, truncatedchromosome CDS1376577 639 - 0.374022
NA str1018 maltose/maltodextrin ABC transporter / tnp1167 hybrid protein, truncatedchromosome CDS918438 624 + 0.370192
NA str1781 IS1193, transposase, ISL3 family, truncatedchromosome CDS1592211 171 + 0.391813
NA str0234 conserved hypothetical proteinchromosome CDS237972 1173 + 0.408355
NA str1452 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS1291175 195 - 0.369231
NA str1451 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS1290530 639 - 0.356808
NA str1405 ISSpn1, transposase, IS3 family, truncatedchromosome CDS1247293 189 - 0.396825
NA str0206 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS213884 333 + 0.363363
NA str0766 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS722451 261 - 0.375479
NA str0843 IS1191, transposase, IS256 family, truncatedchromosome CDS781882 540 - 0.387037
NA str1415 IS1193, transposase, ISL3 family, truncatedchromosome CDS1254783 171 + 0.391813
NA str0244 ISSpn1, transposase, IS3 family, truncatedchromosome CDS251287 489 + 0.359918
NA str1396 ISSpn1, transposase, IS3 family, truncatedchromosome CDS1234697 177 - 0.350282
NA str1414 IS1193, transposase, ISL3 family, truncatedchromosome CDS1253820 666 + 0.376877
NA str0015 IS1167, transposase, ISL3 family, truncatedchromosome CDS15621 285 - 0.368421
NA str0767 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS722671 336 - 0.357143
NA str0601 conserved hypothetical protein, MutT/nudix family proteinchromosome CDS564760 459 - 0.40305
NA str1074 IS1216, transposase, IS6 family, truncatedchromosome CDS965561 516 - 0.397287
NA str0036 IS861, transposase (orf1), IS3 family, truncatedchromosome CDS42710 372 + 0.349462
NA str0398 IS1167, transposase, ISL3 family, truncatedchromosome CDS380451 540 - 0.362963
NA str1131 IS657, transposase, IS200 family, truncatedchromosome CDS992286 264 - 0.325758
NA str1449 hypothetical proteinchromosome CDS1288679 294 - 0.411565
NA str0655 site-specific DNA-methyltransferase (adenine-specific) LlaI, truncatedchromosome CDS617266 459 + 0.305011
NA str0841 IS1191, transposase, IS256 family, truncatedchromosome CDS781214 501 - 0.365269
NA str0743 IS1193, transposase, ISL3 family, truncatedchromosome CDS701196 237 - 0.379747
NA str1677 ISSth1, transposase (orf1), IS3 family, truncatedchromosome CDS1493304 534 + 0.410112
NA str0878 SOS responce UmuC protein, truncatedchromosome CDS806735 399 + 0.353383
NA str0680 conserved hypothetical proteinchromosome CDS642563 537 - 0.340782
NA str1988 conserved hypothetical protein, MutT/nudix familychromosome CDS1757031 552 - 0.353261
NA str1784 IS861, transposase (orf1), IS3 family, truncatedchromosome CDS1594269 285 + 0.322807
NA str0957 unknown proteinchromosome CDS869076 396 + 0.383838
NA str0126 IS1193, transposase, ISL3 family, truncatedchromosome CDS142635 912 - 0.377193
NA str1779 IS1193, transposase, ISL3 family, truncatedchromosome CDS1591562 345 + 0.35942
NA str1526 methylguanine-DNA methyltransferase, truncatedchromosome CDS1353708 339 - 0.436578
NA str1040 unknown proteinchromosome CDS934093 1401 - 0.255532
NA str1206 IS1239, transposase, IS30 family, truncatedchromosome CDS1060408 294 - 0.404762
NA str1404 ISSpn1, transposase, IS3 family, truncatedchromosome CDS1247080 201 - 0.368159
NA str1783 IS657, transposase, IS200 family, truncatedchromosome CDS1593906 249 - 0.329317
NA str0769 IS861, transposase (orf1), IS3 family, truncatedchromosome CDS723252 180 - 0.322222
NA str1035 IS1191, transposase, IS256 family, truncatedchromosome CDS931092 360 + 0.394444
NA str0067 ISSpn1, transposase, IS3 family, truncatedchromosome CDS78874 543 - 0.364641
NA str0972 IS1239, transposase, IS30 family, truncatedchromosome CDS878381 681 + 0.386197
NA str0768 IS861, transposase (orf1), IS3 family, truncatedchromosome CDS723000 249 - 0.393574
NA str1649 methyltransferase, putativechromosome CDS1470069 600 - 0.453333
NA str0962 conserved hypothetical proteinchromosome CDS869951 663 + 0.375566
NA str0024 IS1193, transposase, ISL3 family, truncatedchromosome CDS28385 276 - 0.344203
NA str1905 ISSth4, transposase, IS30 family, truncatedchromosome CDS1696676 369 + 0.363144
NA str0445 IS1193, transposase, ISL3 family, truncatedchromosome CDS417328 954 - 0.40566
NA str0108 IS1216, transposase, IS6 family, truncatedchromosome CDS115281 495 - 0.351515
NA str1611 conserved hypothetical proteinchromosome CDS1434632 309 + 0.427184
NA str0510 hypothetical proteinchromosome CDS480939 636 - 0.389937
NA str1960 DNA recombination protein, putativechromosome CDS1737218 420 + 0.397619
NA str1042 unknown proteinchromosome CDS936567 567 - 0.271605
NA str0207 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS214274 219 + 0.347032
NA str1904 ISSth4, transposase, IS30 family, truncatedchromosome CDS1696272 288 + 0.395833
NA str0327 IS1191, transposase, IS256 family, truncatedchromosome CDS311060 807 + 0.377943
NA str0129 IS1193, transposase, ISL3 family, truncatedchromosome CDS146395 495 - 0.393939
NA str1126 conserved hypothetical proteinchromosome CDS988927 567 - 0.372134
NA str0870 ISSpn1, transposase, IS3 family, truncatedchromosome CDS799872 774 + 0.368217
NA str0018 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS16573 339 + 0.386431
NA str1787 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS1595131 489 + 0.361963
NA str1302 IS1193, transposase, ISL3 family, truncatedchromosome CDS1152673 207 + 0.381643
NA str0679 MutT/nudix family proteinchromosome CDS642067 474 + 0.362869
NA str0095 Integrase/recombinase, putative, truncatedchromosome CDS102513 243 - 0.382716
NA str1897 ISSth4, transposase, IS30 family, truncatedchromosome CDS1692880 369 + 0.360434
NA str0926 IS1193, transposase, ISL3 family, truncatedchromosome CDS848648 771 - 0.390402
NA str0107 IS1216, transposase, IS6 family, truncatedchromosome CDS115087 189 - 0.402116
NA str0863 IS1167, transposase, ISL3 family, truncatedchromosome CDS796539 729 - 0.375857
NA str1130 IS657, transposase, IS200 family, truncatedchromosome CDS992076 174 - 0.396552
NA str1453 IS861, transposase (orf1), IS3 family, truncatedchromosome CDS1291318 351 - 0.401709
NA str1945 IS1191, transposase, IS256 family, truncatedchromosome CDS1721183 360 + 0.397222
NA str1800 topoisomerase/primasechromosome CDS1606948 561 - 0.390374
NA str1274 ISSth5, transposase, IS110 family, truncatedchromosome CDS1123943 387 + 0.390181
NA str0956 hypothetical proteinchromosome CDS868468 624 + 0.36859
NA str0057 3-methyladenine DNA glycosylase I, truncatedchromosome CDS61479 177 + 0.378531
NA str0971 IS1239, transposase, IS30 family, truncatedchromosome CDS878062 348 + 0.37931
NA str1205 IS1239, transposase, IS30 family, truncatedchromosome CDS1059706 678 - 0.386431
NA str0069 ISSpn1, transposase, IS3 family, truncatedchromosome CDS79376 264 - 0.393939
NA str1946 IS1191, transposase, IS256 family, truncatedchromosome CDS1721575 807 + 0.377943
NA str0822 IS1193, transposase, ISL3 family, truncatedchromosome CDS766974 207 - 0.381643
NA str0326 IS1191, transposase, IS256 family, truncatedchromosome CDS310669 375 + 0.402667
NA str0037 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS43135 333 + 0.363363
NA str0136 MutT/nudix family protein, truncatedchromosome CDS153799 330 + 0.39697
NA str0013 IS1167, transposase, ISL3 family, truncatedchromosome CDS14678 222 - 0.382883
NA str1273 ISSth5, transposase, IS110 family, truncatedchromosome CDS1123464 426 + 0.370892
NA str0183 conserved hypothetical protein, putative protein kinasechromosome CDS190049 2340 + 0.287179
NA str1496 MutT/nudix family proteinchromosome CDS1326573 465 - 0.44086
NA str0016 IS861, transposase (orf1), IS3 family, truncatedchromosome CDS16063 285 + 0.322807
NA str0102 integrase/recombinase, phage integrase family, truncatedchromosome CDS111053 243 - 0.271605
NA str0964 hypothetical proteinchromosome CDS871517 1074 + 0.343575
NA str0564 conserved hypothetical protein, MutT/nudix familychromosome CDS529157 549 + 0.424408
NA str0014 IS1167, transposase, ISL3 family, truncatedchromosome CDS14978 726 - 0.384298
NA str1304 IS1193, transposase, ISL3 family, truncatedchromosome CDS1152967 426 + 0.36385
NA str0658 conserved hypothetical proteinchromosome CDS622752 912 + 0.371711
NA str0019 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS16871 543 + 0.368324
NA str1567 conserved hypothetical proteinchromosome CDS1391806 270 + 0.477778
NA str0058 3-methyladenine DNA glycosylase I, truncatedchromosome CDS61789 246 + 0.345528
NA str1454 IS861, transposase (orf1), IS3 family, truncatedchromosome CDS1291634 306 - 0.313726
NA str0854 IS1167, transposase, ISL3 family, truncatedchromosome CDS790117 183 + 0.464481
NA str0871 ISSpn1, transposase, IS3 family, truncatedchromosome CDS800642 105 + 0.304762
NA str0038 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS43636 108 + 0.305556
NA str0742 IS1193, transposase, ISL3 family, truncatedchromosome CDS701102 141 - 0.340426
NA str0879 SOS responce UmuC protein, truncatedchromosome CDS807013 822 + 0.358881
NA str1786 IS861, transposase (orf2), IS3 family, truncatedchromosome CDS1594779 339 + 0.39233
NA str0963 conserved hypothetical proteinchromosome CDS870615 900 + 0.374444
NA str0205 IS861, transposase (orf1), IS3 family, truncatedchromosome CDS213372 459 + 0.357298
alkD str1300 DNA alkylation repair proteinchromosome CDS1151029 480 - 0.383333
comEA str1562 late competence protein required for DNA binding and uptakechromosome CDS1388365 696 - 0.431034
comFA str0368 late competence protein required for DNA uptakechromosome CDS347914 1320 + 0.368182
cshA str1957 chromosome segregation helicasechromosome CDS1735198 1269 - 0.412136
deaD str1261 ATP-dependent RNA helicasechromosome CDS1108612 1083 + 0.382271
dinG str0813 ATP-dependent DNA helicasechromosome CDS760324 2487 + 0.373542
dinP str1656 DNA polymerase IV, damage-induciblechromosome CDS1475989 1104 - 0.432065
dnaA str0001 chromosomal replication initiator protein dnaAchromosome CDS186 1365 + 0.369231
dnaB str0320 chromosome replication initiation / membrane attachment protein DnaBchromosome CDS303452 1176 + 0.397959
dnaD str1221 DNA replication protein dnaDchromosome CDS1072122 699 - 0.39485
dnaE str1198 DNA polymeraDNA polymerase III alphase III alpha subunitchromosome CDS1049472 3111 - 0.386371
dnaG str1489 DNA primasechromosome CDS1318593 1812 - 0.414459
dnaH str0490 DNA polymerase III delta prime subunitchromosome CDS465457 876 + 0.389269
dnaI str0321 primosome component (helicase loader) DnaIchromosome CDS304631 903 + 0.435216
dnaN str0002 beta subunit of DNA polymerase IIIchromosome CDS1705 1137 + 0.354442
dnaQ str1601 DNA polymerase III epsilon subunitchromosome CDS1425444 591 - 0.395939
dnaX str1174 DNA polymerase III subunits gamma / tauchromosome CDS1028810 1653 - 0.415608
dprA str0896 DNA processing protein, Smf familychromosome CDS824323 840 + 0.371429
exoA str1550 3'-exo-deoxyribonucleasechromosome CDS1375077 828 + 0.419082
gyrA str1279 DNA gyrase A subunitchromosome CDS1126907 2436 - 0.421593
gyrB str1521 DNA gyrase B subunitchromosome CDS1349379 1953 - 0.424987
holA str0719 DNA polymerase III delta subunitchromosome CDS679188 1035 + 0.354589
holB str1999 DNA polymerase III delta prime subunitchromosome CDS1764792 1362 - 0.404552
hstH str1209 histone-like DNA-binding proteinchromosome CDS1062325 276 - 0.405797
int2 str0783 integrase/recombinase, phage associatedchromosome CDS735270 1167 + 0.373608
int3 str1663 integrase/recombinase plasmid associated, putativechromosome CDS1482902 462 - 0.393939
int4 str1955 integrase/recombinase, phage associatedchromosome CDS1733616 1140 + 0.344737
ligA str1554 DNA ligasechromosome CDS1378429 1959 - 0.433384
llaBIIM str1376 type II restriction-modification system modification subunitchromosome CDS1215487 675 - 0.367407
mutL str0054 DNA mismatch repair proteinchromosome CDS58436 1944 + 0.412037
mutM str0620 formamidopyrimidine-DNA glycosylasechromosome CDS582471 822 + 0.422141
mutS1 str0050 DNA mismatch repair proteinchromosome CDS54420 2559 + 0.424775
mutS2 str1762 DNA mismatch repair proteinchromosome CDS1574923 2352 + 0.448554
mutT str1143 7,8-dihydro-8-oxoguanine-triphosphatasechromosome CDS1000692 483 - 0.374741
mutY str1757 A/G-specific adenine glycosylasechromosome CDS1569097 1152 + 0.421875
nth str1220 endonuclease III, DNA repairchromosome CDS1071478 660 - 0.392424
parC str0589 DNA topoisomerase IV (subunit C)chromosome CDS554272 2520 + 0.419048
parE str0588 DNA topoisomerase IV (subunit B)chromosome CDS551749 1950 + 0.437949
pcrA str0986 ATP-dependent DNA helicasechromosome CDS888393 2328 + 0.421821
polA str1761 DNA-directed DNA polymerase Ichromosome CDS1572077 2640 - 0.440152
polC str0062 DNA polymerase III alpha subunitchromosome CDS71574 4395 + 0.392719
priA str1429 primosomal replication factor Ychromosome CDS1268852 2397 - 0.438465
radC str1465 DNA repair proteinchromosome CDS1300354 687 - 0.461426
recA str0060 recombination protein Achromosome CDS63437 1155 + 0.409524
recD str1767 exodeoxyribonuclease Vchromosome CDS1580139 2505 + 0.421557
recF str2015 DNA repair and genetic recombination proteinchromosome CDS1782582 1101 + 0.359673
recG str1725 ATP-dependent DNA helicasechromosome CDS1540084 2019 - 0.438831
recJ str1224 single strand DNA-specific exonucleasechromosome CDS1074640 2211 - 0.41972
recN str1213 DNA repair and genetic recombination proteinchromosome CDS1065074 1671 - 0.388989
recO str0027 DNA repair proteinchromosome CDS30613 774 + 0.354005
recR str0614 recombination proteinchromosome CDS578871 597 + 0.430486
rexA str1716 ATP-dependent exonuclease, subunit Achromosome CDS1525864 3654 - 0.437055
rexB str1717 ATP-dependent exonuclease, subunit Bchromosome CDS1529507 3321 - 0.431195
rheA str1568 ATP-dependent RNA helicasechromosome CDS1392632 1587 - 0.444865
rheB str1699 ATP-dependent RNA helicasechromosome CDS1510951 1344 - 0.418155
rnhA str0894 ribonuclease HIIchromosome CDS822542 783 + 0.401022
rnhB str1765 ribonuclease HIIIchromosome CDS1578545 891 + 0.436588
ruvA str0056 Holliday junction DNA helicase, subunit Achromosome CDS60882 591 + 0.387479
ruvB str1936 Holliday junction DNA helicase, subunit Bchromosome CDS1712090 1002 - 0.42515
sbcC str1394 ATP-dependent dsDNA exonucleasechromosome CDS1230216 3180 - 0.440881
sbcD str1395 ATP-dependent dsDNA exonucleasechromosome CDS1233392 1227 - 0.439283
snf str0237 ATP-dependent RNA helicasechromosome CDS242365 3096 + 0.398256
ssbA str1845 single strand binding proteinchromosome CDS1646629 393 - 0.435115
ssbB str1753 single strand binding proteinchromosome CDS1566439 519 - 0.425819
sthIM str0885 type III restriction-modification system methylation subunitchromosome CDS813050 1941 - 0.391551
tatD str1801 deoxyribonuclease, putativechromosome CDS1607501 777 - 0.389961
tnp1191 str1072 IS1191, transposase, IS256 familychromosome CDS962697 1209 - 0.383788
tnp1191 str0839 IS1191, transposase, IS256 familychromosome CDS777514 1209 + 0.383788
tnp1191 str0849 IS1191, transposase, IS256 familychromosome CDS787408 1179 + 0.388465
tnp1193 str1045 IS1193, transposase, ISL3 familychromosome CDS940110 1257 - 0.396181
tnp1193 str1444 IS1193, transposase, ISL3 familychromosome CDS1284589 1347 + 0.386785
tnp1216 str0396 IS1216, transposase, IS6 familychromosome CDS377421 681 + 0.399413
tnp1239 str1491 IS1239, transposase, IS30 familychromosome CDS1321288 999 + 0.387387
tnp1239 str0236 IS1239, transposase, IS30 familychromosome CDS241237 999 + 0.387387
tnp1239 str0223 IS1239, transposase, IS30 familychromosome CDS226461 999 - 0.387387
tnp1239 str1669 IS1239, transposase, IS30 familychromosome CDS1487969 999 + 0.387387
tnp1239 str0371 IS1239, transposase, IS30 familychromosome CDS350533 999 - 0.387387
tnp1239 str0691 IS1239, transposase, IS30 familychromosome CDS648363 999 + 0.387387
tnp1239 str1039 IS1239, transposase, IS30 familychromosome CDS933008 999 - 0.387387
tnp1239 str0105 IS1239, transposase, IS30 familychromosome CDS113202 999 + 0.387387
tnp657 str1807 IS657, transposase, IS200 familychromosome CDS1618129 474 - 0.352321
tnpSth1 str0797 ISSth1, transposase (orf1), IS3 familychromosome CDS749374 741 - 0.396761
tnpSth1 str1678 ISSth1, transposase (orf2), IS3 familychromosome CDS1493852 870 + 0.401149
tnpSth1 str0796 ISSth1, transposase (orf2), IS3 familychromosome CDS748490 870 - 0.401149
topA str0897 DNA topoisomerase Ichromosome CDS825330 2145 + 0.409324
trcF str0006 transcription repair coupling factorchromosome CDS5046 3507 + 0.381238
umuC1 str1385 SOS responce UmuC proteinchromosome CDS1221055 1416 - 0.385593
ung str1055 uracil DNA glycosylasechromosome CDS951474 681 - 0.424376
uvrA str1748 excinuclease ABC subunit Achromosome CDS1560213 2826 - 0.446568
uvrB str1497 excinuclease ABC subunit Bchromosome CDS1327082 2007 - 0.43149
uvrC str1306 excinuclease ABC subunit Cchromosome CDS1155070 1788 - 0.431767
xer1 str1008 integrase/recombinase, tyrosine familychromosome CDS908504 1071 - 0.365079
xer2 str0259 Integrase/recombinase, tyrosine familychromosome CDS261672 762 + 0.412073
xseA str1218 exodeoxyribonuclease VII, large subunitchromosome CDS1069071 1341 - 0.422073
xseB str1217 exodeoxyribonuclease VII, small subunitchromosome CDS1068878 216 - 0.365741