Gene list
Applied filters:
COG category: Replication, recombination and repair
Organism: Vibrio fischeri ES114, ES114
Number of genes found: 172
 | ||||||
| Hide UniProt / TrEMBL protein name | |
View in Fasta format (DNA) | |
View in Fasta format (Protein) | |
|
| ||||||
| Vibrio fischeri ES114, ES114 | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Name | Locus tag | Product / Description | UniProt / TrEMBL protein name | Genomic element | Type | Begin | Length | Strand | GC-content |
| NA | VFA0524 | ribonuclease H | SubName: Full=Ribonuclease H; EC=3.1.26.4; | chromosome II | CDS | 598303 | 447 | + | 0.427293 |
| NA | VF0501 | Sec-independent protein translocase protein TatD | SubName: Full=Predicted Dnase; EC=3.1.21.-; | chromosome I | CDS | 538748 | 777 | + | 0.361647 |
| NA | VFA0543 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 627245 | 504 | + | 0.373016 |
| NA | VF1790 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome I | CDS | 2025680 | 1197 | + | 0.379282 |
| NA | VFA0571 | DNA integration/recombination/invertion protein | SubName: Full=DNA integration/recombination/invertion protein; | chromosome II | CDS | 656958 | 915 | - | 0.35082 |
| NA | VFA0016 | DNA polymerase III epsilon subunit (3'-5' exonuclease) | SubName: Full=DNA polymerase III, epsilon-subunit paralog (3 to 5 exonuclease); | chromosome II | CDS | 17141 | 639 | + | 0.381847 |
| NA | VF1641 | DNA topoisomerase III | RecName: Full=DNA topoisomerase 3; EC=5.99.1.2; AltName: Full=DNA topoisomerase III; | chromosome I | CDS | 1847112 | 1971 | - | 0.408422 |
| NA | VF1334 | oxalate/formate antiporter | SubName: Full=Oxalate/formate antiporter; | chromosome I | CDS | 1484982 | 798 | + | 0.365915 |
| NA | VF1482 | exodeoxyribonuclease I | RecName: Full=Exodeoxyribonuclease I; EC=3.1.11.1; | chromosome I | CDS | 1643557 | 1425 | + | 0.403509 |
| NA | VF0126 | DNA repair protein RadC | RecName: Full=UPF0758 protein VF_0126; | chromosome I | CDS | 145008 | 675 | + | 0.408889 |
| NA | VF1628 | DNA polymerase II | RecName: Full=DNA polymerase; EC=2.7.7.7; | chromosome I | CDS | 1831832 | 2346 | - | 0.355072 |
| NA | VF1626 | excinuclease ABC subunit C | RecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; | chromosome I | CDS | 1829185 | 1827 | - | 0.378763 |
| NA | VF0583 | exodeoxyribonuclease V alpha chain | SubName: Full=Exonuclease V (RecBCD complex), alpha subunit; EC=3.1.11.5; | chromosome I | CDS | 640867 | 2019 | + | 0.406637 |
| NA | VF0751 | DNA polymerase III, delta subunit | SubName: Full=DNA polymerase III, delta subunit; EC=2.7.7.7; | chromosome I | CDS | 818592 | 1035 | - | 0.384541 |
| NA | VF0412 | DNA polymerase III, chi subunit | SubName: Full=DNA polymerase III, chi subunit; EC=2.7.7.7; | chromosome I | CDS | 442755 | 444 | - | 0.421171 |
| NA | VFA0395 | hypothetical protein | SubName: Full=Conserved protein with nucleoside triphosphate hydrolase domain; | chromosome II | CDS | 447464 | 1635 | - | 0.382875 |
| NA | VF1465 | superfamily I DNA and RNA helicases | SubName: Full=Superfamily I DNA and RNA helicase; EC=3.6.1.-; | chromosome I | CDS | 1625447 | 1404 | + | 0.388177 |
| NA | VFA1157 | ATP-dependent DNA helicase RecQ | chromosome II | CDS | 1300510 | 819 | + | 0.365079 | |
| NA | VF1168 | exonuclease SbcC | SubName: Full=Exonuclease, dsDNA, ATP-dependent; EC=3.1.11.-; | chromosome I | CDS | 1298604 | 3681 | + | 0.408313 |
| NA | VF1352 | hypothetical protein | SubName: Full=MutT/nudix family protein; EC=6.-.-.-; | chromosome I | CDS | 1499175 | 453 | - | 0.403974 |
| NA | VFA1129 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 1268456 | 11415 | - | 0.39378 |
| NA | VF1685 | recombination protein RecR | RecName: Full=Recombination protein RecR; | chromosome I | CDS | 1899689 | 603 | - | 0.429519 |
| NA | VF1500 | ATP-dependent helicase HrpA | SubName: Full=ATP-dependent helicase HrpA; | chromosome I | CDS | 1661274 | 3840 | - | 0.4 |
| NA | VFA0663 | integrase/recombinase (XerC/CodV family) | SubName: Full=Integrase/recombinase (XerC/CodV family); | chromosome II | CDS | 735545 | 984 | + | 0.380081 |
| NA | VFA0553 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome II | CDS | 637578 | 1383 | + | 0.388286 |
| NA | VFA0652 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 726046 | 1026 | + | 0.304094 |
| NA | VF0341 | excinuclease ABC subunit A | RecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; | chromosome I | CDS | 368760 | 2826 | - | 0.404105 |
| NA | VF0990 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.11.1; | chromosome I | CDS | 1092502 | 960 | - | 0.341667 |
| NA | VFA0384 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase DeaD; EC=3.6.4.13; AltName: Full=Cold-shock DEAD box protein A; | chromosome II | CDS | 434633 | 1905 | + | 0.450919 |
| NA | VF0951 | holliday junction DNA helicase RuvA | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; | chromosome I | CDS | 1047362 | 624 | + | 0.395833 |
| NA | VF1461 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 1620055 | 2016 | - | 0.335317 |
| NA | VF0448 | integrase/recombinase (XerD/RipX family) | RecName: Full=Tyrosine recombinase XerD; | chromosome I | CDS | 477863 | 897 | + | 0.391304 |
| NA | VF0929 | endonuclease III | RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; | chromosome I | CDS | 1024056 | 636 | - | 0.369497 |
| NA | VF0636 | exodeoxyribonuclease VII large subunit | RecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; | chromosome I | CDS | 692876 | 1350 | - | 0.407407 |
| NA | VF0635 | conserved hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 692650 | 234 | + | 0.358974 |
| NA | VF1989 | recombination associated protein RdgC | RecName: Full=Recombination-associated protein RdgC; | chromosome I | CDS | 2228535 | 915 | + | 0.395628 |
| NA | VF1538 | hypothetical protein | SubName: Full=Membrane protein, putative; | chromosome I | CDS | 1723100 | 2355 | + | 0.379193 |
| NA | VF0950 | crossover junction endodeoxyribonuclease RuvC | RecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; | chromosome I | CDS | 1046735 | 522 | + | 0.436782 |
| NA | VF1007 | primosomal replication protein N' | SubName: Full=Primosomal replication protein N; | chromosome I | CDS | 1114525 | 552 | - | 0.402174 |
| NA | VFB15 | resolvease/recombinase | SubName: Full=Resolvease/recombinase; | pES100 | CDS | 8774 | 648 | + | 0.393519 |
| NA | VF1733 | putative deoxyribonuclease YcfH | SubName: Full=Predicted metallodependent hydrolase; EC=3.1.21.-; | chromosome I | CDS | 1960448 | 771 | - | 0.367056 |
| NA | VF2463 | bis(5'-adenosyl)-triphosphatase | chromosome I | CDS | 2768811 | 432 | - | 0.409722 | |
| NA | VF0056 | ATP-dependent RNA helicase RhlB | chromosome I | CDS | 64060 | 216 | - | 0.472222 | |
| NA | VF0353 | single-strand DNA binding protein | RecName: Full=Single-stranded DNA-binding protein; | chromosome I | CDS | 384918 | 534 | + | 0.464419 |
| NA | VF1495 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome I | CDS | 1656474 | 1683 | - | 0.402258 |
| NA | VF0864 | hypothetical protein | SubName: Full=Predicted ATP-dependet helicase; | chromosome I | CDS | 949076 | 1725 | - | 0.408696 |
| NA | VFA0459 | transcription-repair coupling factor | chromosome II | CDS | 527447 | 1599 | - | 0.409006 | |
| NA | VF0498 | DNA polymerase III, psi subunit | RecName: Full=DNA polymerase III subunit psi; | chromosome I | CDS | 535975 | 402 | + | 0.393035 |
| NA | VF2113 | uracil-DNA glycosylase | RecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; | chromosome I | CDS | 2353637 | 675 | - | 0.388148 |
| NA | VF0581 | exodeoxyribonuclease V gamma chain | SubName: Full=Exonuclease V (RecBCD complex), gamma subunit; EC=3.1.11.5; | chromosome I | CDS | 633537 | 3420 | + | 0.415789 |
| NA | VF0952 | holliday junction DNA helicase RuvB | RecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; | chromosome I | CDS | 1048013 | 1014 | + | 0.401381 |
| NA | VFA0401 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 455948 | 1470 | - | 0.396599 |
| NA | VF0433 | hypothetical cytosolic protein | RecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; | chromosome I | CDS | 461651 | 426 | - | 0.410798 |
| NA | VF1178 | CoA pyrophosphatase | SubName: Full=Predicted NUDIX hydrolase; EC=3.6.1.-; | chromosome I | CDS | 1310863 | 582 | - | 0.352234 |
| NA | VF1947 | DNA polymerase III alpha subunit | SubName: Full=DNA polymerase III alpha subunit; EC=2.7.7.7; | chromosome I | CDS | 2180034 | 3480 | - | 0.409195 |
| NA | VFA0132 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 147807 | 237 | + | 0.375527 |
| NA | VF1009 | ATP-dependent helicase, DinG family | SubName: Full=ATP-dependent DNA helicase; | chromosome I | CDS | 1115926 | 2085 | - | 0.383693 |
| NA | VF2163 | ATP-dependent helicase HrpB | SubName: Full=Predicted ATP-dependent helicase; | chromosome I | CDS | 2437439 | 2466 | - | 0.380779 |
| NA | VFA0151 | ATP-dependent RNA helicase | RecName: Full=ATP-dependent RNA helicase RhlE; EC=3.6.4.13; | chromosome II | CDS | 166800 | 1503 | + | 0.407851 |
| NA | VFA0349 | DNA polymerase III, epsilon chain | SubName: Full=DNA polymerase III, epsilon-subunit paralog (3 to 5 exonuclease); EC=2.7.7.7; | chromosome II | CDS | 390260 | 780 | - | 0.373077 |
| NA | VF0455 | DNA mismatch repair protein MutH | RecName: Full=DNA mismatch repair protein MutH; AltName: Full=Methyl-directed mismatch repair protein; | chromosome I | CDS | 486085 | 669 | - | 0.408072 |
| NA | VFA1156 | ATP-dependent DNA helicase RecQ | chromosome II | CDS | 1299094 | 1395 | + | 0.377778 | |
| NA | VF0011 | DNA replication and repair protein RecF | RecName: Full=DNA replication and repair protein RecF; | chromosome I | CDS | 9957 | 1080 | + | 0.408333 |
| NA | VF1890 | NAD-dependent DNA ligase | RecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; | chromosome I | CDS | 2129887 | 2007 | - | 0.409068 |
| NA | VF0444 | ATP-dependent RNA helicase SrmB | RecName: Full=ATP-dependent RNA helicase SrmB; EC=3.6.4.13; | chromosome I | CDS | 473441 | 1242 | - | 0.42351 |
| NA | VF1557 | ATP-dependent helicase HrpA | SubName: Full=ATP-dependent helicase HrpA; | chromosome I | CDS | 1743818 | 2343 | - | 0.379855 |
| NA | VF1144 | putative ATP-dependent RNA helicase RhlE | SubName: Full=DNA and RNA helicase; | chromosome I | CDS | 1270231 | 1296 | + | 0.405093 |
| NA | VFB07 | DNA repair protein RadC | SubName: Full=DNA repair protein RadC; | pES100 | CDS | 3771 | 498 | - | 0.405622 |
| NA | VFA0374 | ATP-dependent RNA helicase | SubName: Full=ATP-dependent RNA helicase; | chromosome II | CDS | 422266 | 1305 | + | 0.384674 |
| NA | VF1575 | O6-methylguanine-DNA methyltransferase | SubName: Full=O6-methylguanine-DNA methyltransferase; EC=2.1.1.63; | chromosome I | CDS | 1766844 | 303 | + | 0.349835 |
| NA | VF2232 | ADP-ribose pyrophosphatase | SubName: Full=ADP-ribose pyrophosphatase; EC=3.6.1.13; | chromosome I | CDS | 2511096 | 639 | - | 0.403756 |
| NA | VFA0177 | O6-methylguanine-DNA methyltransferase | RecName: Full=Methylated-DNA--protein-cysteine methyltransferase; EC=2.1.1.63; AltName: Full=6-O-methylguanine-DNA methyltransferase; AltName: Full=O-6-methylguanine-DNA-alkyltransferase; | chromosome II | CDS | 199764 | 474 | + | 0.388186 |
| NA | VF0009 | chromosomal replication initiator protein DnaA | RecName: Full=Chromosomal replication initiator protein DnaA; | chromosome I | CDS | 7401 | 1410 | + | 0.407092 |
| NA | VFA0753 | deoxyribodipyrimidine photolyase | SubName: Full=Deoxyribodipyrimidine photolyase Phr, FAD-binding; EC=4.1.99.3; | chromosome II | CDS | 850670 | 1440 | + | 0.376389 |
| NA | VFA0408 | phosphohydrolase (MutT/nudix family protein) | SubName: Full=Phosphohydrolase (MutT/nudix family protein); | chromosome II | CDS | 463202 | 528 | + | 0.352273 |
| NA | VFA0603 | hypothetical cytosolic protein | SubName: Full=Predicted endonuclease; | chromosome II | CDS | 684925 | 285 | - | 0.329825 |
| NA | VFA0154 | ATP-dependent RNA helicase DbpA | SubName: Full=ATP-dependent RNA helicase, specific for 23S rRNA; | chromosome II | CDS | 171550 | 1389 | - | 0.403888 |
| NA | VF1049 | putative DNA methylase | SubName: Full=Putative DNA methylase; | chromosome I | CDS | 1159028 | 858 | - | 0.409091 |
| NA | VF2325 | DNA mismatch repair protein MutL | RecName: Full=DNA mismatch repair protein MutL; | chromosome I | CDS | 2618642 | 1983 | - | 0.388301 |
| NA | VF2539 | DNA topoisomerase I | SubName: Full=Predicted DNA topoisomerase; EC=5.99.1.2; | chromosome I | CDS | 2868521 | 570 | - | 0.387719 |
| NA | VF0301 | replicative DNA helicase | SubName: Full=Replicative DNA helicase; EC=3.6.1.-; | chromosome I | CDS | 309895 | 1398 | + | 0.424177 |
| NA | VF2114 | endonuclease IV | SubName: Full=Endonuclease IV with intrinsic 3-5 exonuclease activity; EC=3.1.21.2; | chromosome I | CDS | 2354487 | 672 | - | 0.376488 |
| NA | VFB51 | hypothetical protein | SubName: Full=Uncharacterized protein; | pES100 | CDS | 41985 | 516 | + | 0.352713 |
| NA | VF1167 | exonuclease SbcD | SubName: Full=Exonuclease, dsDNA, ATP-dependent; EC=3.1.11.-; | chromosome I | CDS | 1297363 | 1245 | + | 0.398394 |
| NA | VF1758 | integration host factor beta-subunit | RecName: Full=Integration host factor subunit beta; Short=IHF-beta; | chromosome I | CDS | 1987422 | 282 | - | 0.41844 |
| NA | VF2212 | endonuclease | RecName: Full=UPF0102 protein VF_2212; | chromosome I | CDS | 2493560 | 372 | + | 0.392473 |
| NA | VF1439 | putative ATP-dependent RNA helicase RhlE | SubName: Full=ATP-dependent RNA helicase, DEAD box family; | chromosome I | CDS | 1593953 | 1266 | - | 0.402054 |
| NA | VF0450 | single-stranded-DNA-specific exonuclease RecJ | SubName: Full=SsDNA exonuclease, 5--> 3-specific; EC=3.1.-.-; | chromosome I | CDS | 479681 | 1740 | + | 0.404023 |
| NA | VF0535 | RecA protein | RecName: Full=Protein RecA; AltName: Full=Recombinase A; | chromosome I | CDS | 577808 | 1047 | + | 0.406877 |
| NA | VF1268 | hypothetical protein | chromosome I | CDS | 1411810 | 711 | - | 0.396624 | |
| NA | VF0594 | exodeoxyribonuclease IX | RecName: Full=Flap endonuclease Xni; Short=FEN; EC=3.1.-.-; | chromosome I | CDS | 652357 | 780 | - | 0.407692 |
| NA | VF1051 | DNA topoisomerase I | RecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; | chromosome I | CDS | 1161017 | 2631 | + | 0.417712 |
| NA | VF0074 | DNA polymerase I | SubName: Full=Fused DNA polymerase I 5->3 exonuclease/3->5 polymerase/3->5 exonuclease; EC=2.7.7.7; | chromosome I | CDS | 86559 | 2799 | + | 0.405145 |
| NA | VFA0126 | DNA-3-methyladenine glycosylase | SubName: Full=DNA-3-methyladenine glycosylase; EC=3.2.2.20; | chromosome II | CDS | 142995 | 708 | - | 0.416667 |
| NA | VF0422 | A/G-specific adenine DNA glycosylase | chromosome I | CDS | 451444 | 1428 | - | 0.40126 | |
| NA | VFA0135 | DNA helicase II | SubName: Full=DNA helicase II; EC=3.6.1.-; | chromosome II | CDS | 148697 | 1863 | - | 0.340848 |
| NA | VF1936 | ribonuclease H | RecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; | chromosome I | CDS | 2171052 | 474 | + | 0.417722 |
| NA | VFA0581 | RstA | SubName: Full=RstA2 protein; | chromosome II | CDS | 663940 | 1155 | - | 0.374892 |
| NA | VF2085 | DNA repair protein RecO | RecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; | chromosome I | CDS | 2328236 | 717 | - | 0.412831 |
| NA | VFA0501 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 577419 | 438 | - | 0.385845 |
| NA | VF2228 | topoisomerase IV subunit B | RecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; | chromosome I | CDS | 2507215 | 1881 | - | 0.424242 |
| NA | VF2460 | ATP-dependent DNA helicase RecG | SubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; | chromosome I | CDS | 2765122 | 2082 | + | 0.417867 |
| NA | VF0799 | DNA-binding protein HU | SubName: Full=HU, DNA-binding transcriptional regulator, beta subunit; | chromosome I | CDS | 876307 | 297 | + | 0.407407 |
| NA | VF2397 | DNA-binding protein HU | SubName: Full=HU, DNA-binding transcriptional regulator, alpha subunit; | chromosome I | CDS | 2692477 | 273 | - | 0.428571 |
| NA | VF1583 | exodeoxyribonuclease III | SubName: Full=Exonuclease III; EC=3.1.11.2; | chromosome I | CDS | 1777121 | 807 | + | 0.390335 |
| NA | VFA0515 | transposase | SubName: Full=Conserved prophage protein; | chromosome II | CDS | 591461 | 654 | + | 0.302752 |
| NA | VFB45 | single-strand DNA binding protein | RecName: Full=Single-stranded DNA-binding protein; | pES100 | CDS | 34547 | 351 | + | 0.37037 |
| NA | VF0068 | DNA helicase II | SubName: Full=DNA-dependent ATPase I and helicase II; EC=3.6.1.-; | chromosome I | CDS | 77541 | 2202 | + | 0.429609 |
| NA | VF0012 | DNA gyrase subunit B | RecName: Full=DNA gyrase subunit B; EC=5.99.1.3; | chromosome I | CDS | 11054 | 2418 | + | 0.421836 |
| NA | VFA0871 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 984628 | 480 | - | 0.25625 |
| NA | VF1998 | DNA repair protein RecN | RecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; | chromosome I | CDS | 2239201 | 1668 | + | 0.398082 |
| NA | VF2253 | DNA primase | chromosome I | CDS | 2534244 | 936 | + | 0.41453 | |
| NA | VF0936 | excinuclease ABC subunit B | RecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; | chromosome I | CDS | 1031618 | 2031 | + | 0.386017 |
| NA | VFB02 | DNA primase TraC | SubName: Full=DNA primase TraC; EC=2.7.7.-; | pES100 | CDS | 655 | 984 | - | 0.364837 |
| NA | VF2274 | primosomal protein N' | SubName: Full=Primosome factor n (Replication factor Y); | chromosome I | CDS | 2562411 | 2214 | + | 0.410117 |
| NA | VFB46 | DNA topoisomerase III | RecName: Full=DNA topoisomerase; EC=5.99.1.2; | pES100 | CDS | 34953 | 1995 | + | 0.414035 |
| NA | VF0815 | SeqA protein | RecName: Full=Negative modulator of initiation of replication; | chromosome I | CDS | 894288 | 543 | + | 0.399632 |
| NA | VF1237 | integration host factor alpha-subunit | RecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; | chromosome I | CDS | 1379124 | 297 | + | 0.417508 |
| NA | VF1450 | ATP-dependent DNA ligase | SubName: Full=DNA ligase; EC=6.5.1.1; | chromosome I | CDS | 1603916 | 858 | - | 0.391608 |
| NA | VFA0460 | transcription-repair coupling factor | chromosome II | CDS | 529000 | 1902 | - | 0.423239 | |
| NA | VF0907 | ATPase, AAA family | SubName: Full=Recombination protein; | chromosome I | CDS | 1001479 | 1347 | + | 0.414254 |
| NA | VFA0815 | DNA-3-methyladenine glycosylase | SubName: Full=3-methyl-adenine DNA glycosylase I, constitutive; EC=3.2.2.20; | chromosome II | CDS | 921220 | 570 | - | 0.333333 |
| NA | VFA0846 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 955271 | 1191 | + | 0.36272 |
| NA | VF0136 | 3-deoxy-D-manno-octulosonic acid kinase | RecName: Full=3-deoxy-D-manno-octulosonic acid kinase; Short=Kdo kinase; EC=2.7.1.166; | chromosome I | CDS | 153863 | 705 | + | 0.404255 |
| NA | VF1713 | ATP-dependent helicase, DinG family | SubName: Full=Conserved protein with nucleoside triphosphate hydrolase domain; | chromosome I | CDS | 1931504 | 1959 | - | 0.404288 |
| NA | VF1044 | RNA-directed DNA polymerase | SubName: Full=Reverse transcriptase; EC=2.7.7.49; | chromosome I | CDS | 1153921 | 1188 | + | 0.324074 |
| NA | VF2382 | DNA polymerase III, epsilon chain | SubName: Full=DNA polymerase III, epsilon-subunit paralog (3 to 5 exonuclease); | chromosome I | CDS | 2679191 | 642 | + | 0.380062 |
| NA | VF2252 | hypothetical protein | chromosome I | CDS | 2533412 | 711 | + | 0.420534 | |
| NA | VF2541 | DNA processing protein | SubName: Full=DNA processing protein DprA (Smf), possibly competence-related; | chromosome I | CDS | 2869577 | 1110 | - | 0.431532 |
| NA | VF0437 | endonuclease I | SubName: Full=DNA-specific endonuclease I; EC=3.1.21.1; | chromosome I | CDS | 464515 | 705 | - | 0.407092 |
| NA | VF1464 | superfamily I DNA and RNA helicases | SubName: Full=Superfamily I DNA and RNA helicase; EC=3.6.1.-; | chromosome I | CDS | 1623938 | 1398 | + | 0.379828 |
| NA | VF0055 | ATP-dependent RNA helicase RhlB | chromosome I | CDS | 62978 | 1032 | - | 0.426357 | |
| NA | VF1622 | helicase IV | SubName: Full=DNA helicase IV; EC=3.6.1.-; | chromosome I | CDS | 1822523 | 2064 | - | 0.37064 |
| NA | VF0052 | Sec-independent protein translocase protein TatD | SubName: Full=DNase, TatD Family; EC=3.1.21.-; | chromosome I | CDS | 59228 | 762 | - | 0.393701 |
| NA | VFA1102 | hypothetical protein | SubName: Full=Site-specific recombinase, phage integrase family; | chromosome II | CDS | 1245217 | 804 | - | 0.35199 |
| NA | VF2496 | serine/threonine protein kinase | SubName: Full=Serine/threonine protein kinase; EC=2.7.11.1; | chromosome I | CDS | 2806142 | 1326 | + | 0.382353 |
| NA | VF2521 | ATP-dependent DNA helicase rep | SubName: Full=DNA helicase and single-stranded DNA-dependent ATPase; EC=3.6.1.-; | chromosome I | CDS | 2836217 | 2016 | - | 0.400298 |
| NA | VF2514 | DNA polymerase III, epsilon chain | SubName: Full=DNA polymerase III, epsilon-subunit paralog (3 to 5 exonuclease); EC=2.7.7.7; | chromosome I | CDS | 2826267 | 717 | + | 0.408647 |
| NA | VF0534 | DNA mismatch repair protein MutS | chromosome I | CDS | 574498 | 2760 | - | 0.405072 | |
| NA | VF2041 | DNA integration/recombination/invertion protein | SubName: Full=DNA integration/recombination/invertion protein; | chromosome I | CDS | 2275570 | 978 | + | 0.396728 |
| NA | VF1948 | ribonuclease HII | RecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; | chromosome I | CDS | 2183513 | 624 | - | 0.407051 |
| NA | VFA0548 | DNA integration/recombination/invertion protein | SubName: Full=Phage family integrase; | chromosome II | CDS | 631210 | 1200 | - | 0.385 |
| NA | VF0925 | ribonuclease T | RecName: Full=Ribonuclease T; EC=3.1.13.-; AltName: Full=Exoribonuclease T; | chromosome I | CDS | 1021265 | 669 | - | 0.38565 |
| NA | VFA0127 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 143893 | 486 | + | 0.372428 |
| NA | VF0582 | exodeoxyribonuclease V beta chain | SubName: Full=Exonuclease V (RecBCD complex), beta subunit; EC=3.1.11.5; | chromosome I | CDS | 637248 | 3627 | + | 0.409981 |
| NA | VF0270 | superfamily II DNA/RNA helicases, SNF2 family | RecName: Full=RNA polymerase-associated protein RapA; EC=3.6.4.-; AltName: Full=ATP-dependent helicase HepA; | chromosome I | CDS | 274361 | 2859 | + | 0.409934 |
| NA | VF0456 | bis(5'-nucleosyl)-tetraphosphatase(asymmetrical) | RecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; | chromosome I | CDS | 487351 | 513 | + | 0.423002 |
| NA | VFA0513 | DNA integration/recombination/invertion protein | SubName: Full=DNA integration/recombination/invertion protein; | chromosome II | CDS | 589765 | 183 | + | 0.404372 |
| NA | VFA0522 | DNA repair protein RadC | SubName: Full=DNA repair protein RadC; | chromosome II | CDS | 597399 | 474 | - | 0.417722 |
| NA | VF2289 | DNA adenine methylase | SubName: Full=DNA adenine methylase; EC=2.1.1.72; | chromosome I | CDS | 2578278 | 831 | - | 0.377858 |
| NA | VF1935 | DNA polymerase III, epsilon chain | SubName: Full=DNA polymerase III epsilon subunit; EC=2.7.7.7; | chromosome I | CDS | 2170283 | 732 | - | 0.404372 |
| NA | VF0070 | ATP-dependent DNA helicase RecQ | SubName: Full=ATP-dependent DNA helicase; EC=3.6.1.-; | chromosome I | CDS | 81295 | 1836 | + | 0.419935 |
| NA | VF2483 | integrase/recombinase (XerC/CodV family) | RecName: Full=Tyrosine recombinase XerC; | chromosome I | CDS | 2790064 | 912 | - | 0.408991 |
| NA | VFA0512 | hypothetical protein | SubName: Full=Phage integrase family protein; | chromosome II | CDS | 589427 | 306 | + | 0.395425 |
| NA | VF0713 | exodeoxyribonuclease VII small subunit | RecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; | chromosome I | CDS | 781089 | 243 | - | 0.395062 |
| NA | VF0801 | COME operon protein 1 | SubName: Full=ComE-related protein; | chromosome I | CDS | 878852 | 303 | + | 0.369637 |
| NA | VF0734 | DNA polymerase IV | RecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; | chromosome I | CDS | 799555 | 1098 | + | 0.367031 |
| NA | VF0130 | formamidopyrimidine-DNA glycosylase | RecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; | chromosome I | CDS | 147452 | 819 | + | 0.387057 |
| NA | VFA0625 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome II | CDS | 704646 | 450 | - | 0.337778 |
| NA | VF1514 | Exonuclease KapD | SubName: Full=Exonuclease KapD; | chromosome I | CDS | 1692207 | 531 | - | 0.382298 |
| NA | VF2403 | NADH pyrophosphatase | SubName: Full=NADH pyrophosphatase; EC=3.6.1.22; | chromosome I | CDS | 2697623 | 759 | - | 0.370224 |
| NA | VF0893 | hypothetical protein | SubName: Full=Uncharacterized protein; | chromosome I | CDS | 983496 | 513 | - | 0.378168 |
| NA | VF1687 | DNA polymerase III subunit gamma/tau | SubName: Full=DNA polymerase III/DNA elongation factor III, tau and gamma subunits; EC=2.7.7.7; | chromosome I | CDS | 1900834 | 2127 | - | 0.428773 |
| NA | VFA1158 | hypothetical cytosolic protein | SubName: Full=Hypothetical cytosolic protein; | chromosome II | CDS | 1301438 | 1641 | + | 0.388178 |
| NA | VF2192 | mutator MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) | SubName: Full=Nucleoside triphosphate pyrophosphohydrolase, marked preference for dGTP; EC=3.6.1.-; | chromosome I | CDS | 2469462 | 402 | - | 0.350746 |
| NA | VF2454 | hypothetical protein | RecName: Full=Ribosomal RNA small subunit methyltransferase D; EC=2.1.1.171; | chromosome I | CDS | 2761365 | 603 | + | 0.394693 |
| NA | VF0010 | DNA polymerase III, beta chain | RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; | chromosome I | CDS | 8843 | 1101 | + | 0.405086 |
| NA | VF1204 | DNA gyrase subunit A | RecName: Full=DNA gyrase subunit A; EC=5.99.1.3; | chromosome I | CDS | 1342860 | 2637 | + | 0.420554 |
| NA | VF1734 | DNA polymerase III, delta' subunit | SubName: Full=DNA polymerase III, delta prime subunit; EC=2.7.7.7; | chromosome I | CDS | 1961208 | 807 | - | 0.364312 |
| NA | VF2227 | topoisomerase IV subunit A | RecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; | chromosome I | CDS | 2504936 | 2277 | - | 0.410189 |
| NA | VFA0542 | superfamily I DNA helicases and helicase subunits | SubName: Full=Superfamily I DNA helicase and helicase subunits; | chromosome II | CDS | 623184 | 4065 | + | 0.407134 |
| NA | VF2391 | DNA-binding protein Fis | RecName: Full=DNA-binding protein Fis; | chromosome I | CDS | 2686837 | 375 | + | 0.384 |
|
Beutenbergstraße 11 D-07745 Jena • Germany |
Phone: +49 3641 65-6000 Fax: +49 3641 65-6351 |
E-mail: info@leibniz-fli.de www.leibniz-fli.de |
Data Privacy Imprint |
|