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2024-05-06 19:50:04

Gene list

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COG category: Replication, recombination and repair
Organism: Vibrio fischeri ES114, ES114

Number of genes found: 172

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio fischeri ES114, ES114
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA VF0070 ATP-dependent DNA helicase RecQchromosome I CDS81295 1836 + 0.419935
NA VFA0571 DNA integration/recombination/invertion proteinchromosome II CDS656958 915 - 0.35082
NA VF1514 Exonuclease KapDchromosome I CDS1692207 531 - 0.382298
NA VF0412 DNA polymerase III, chi subunitchromosome I CDS442755 444 - 0.421171
NA VFA1156 ATP-dependent DNA helicase RecQchromosome II CDS1299094 1395 + 0.377778
NA VF1575 O6-methylguanine-DNA methyltransferasechromosome I CDS1766844 303 + 0.349835
NA VF1936 ribonuclease Hchromosome I CDS2171052 474 + 0.417722
NA VF1687 DNA polymerase III subunit gamma/tauchromosome I CDS1900834 2127 - 0.428773
NA VF1178 CoA pyrophosphatasechromosome I CDS1310863 582 - 0.352234
NA VF0011 DNA replication and repair protein RecFchromosome I CDS9957 1080 + 0.408333
NA VFA0154 ATP-dependent RNA helicase DbpAchromosome II CDS171550 1389 - 0.403888
NA VF0636 exodeoxyribonuclease VII large subunitchromosome I CDS692876 1350 - 0.407407
NA VF1464 superfamily I DNA and RNA helicaseschromosome I CDS1623938 1398 + 0.379828
NA VF0951 holliday junction DNA helicase RuvAchromosome I CDS1047362 624 + 0.395833
NA VFA0524 ribonuclease Hchromosome II CDS598303 447 + 0.427293
NA VF1461 hypothetical proteinchromosome I CDS1620055 2016 - 0.335317
NA VFA0177 O6-methylguanine-DNA methyltransferasechromosome II CDS199764 474 + 0.388186
NA VFA0374 ATP-dependent RNA helicasechromosome II CDS422266 1305 + 0.384674
NA VF1204 DNA gyrase subunit Achromosome I CDS1342860 2637 + 0.420554
NA VF0907 ATPase, AAA familychromosome I CDS1001479 1347 + 0.414254
NA VF0929 endonuclease IIIchromosome I CDS1024056 636 - 0.369497
NA VFA0501 hypothetical proteinchromosome II CDS577419 438 - 0.385845
NA VFA0384 ATP-dependent RNA helicasechromosome II CDS434633 1905 + 0.450919
NA VF0448 integrase/recombinase (XerD/RipX family)chromosome I CDS477863 897 + 0.391304
NA VF1268 hypothetical proteinchromosome I CDS1411810 711 - 0.396624
NA VF2539 DNA topoisomerase Ichromosome I CDS2868521 570 - 0.387719
NA VF1935 DNA polymerase III, epsilon chainchromosome I CDS2170283 732 - 0.404372
NA VF1557 ATP-dependent helicase HrpAchromosome I CDS1743818 2343 - 0.379855
NA VF2113 uracil-DNA glycosylasechromosome I CDS2353637 675 - 0.388148
NA VFA0459 transcription-repair coupling factorchromosome II CDS527447 1599 - 0.409006
NA VF0801 COME operon protein 1chromosome I CDS878852 303 + 0.369637
NA VF2289 DNA adenine methylasechromosome I CDS2578278 831 - 0.377858
NA VF2253 DNA primasechromosome I CDS2534244 936 + 0.41453
NA VF0501 Sec-independent protein translocase protein TatDchromosome I CDS538748 777 + 0.361647
NA VFA0548 DNA integration/recombination/invertion proteinchromosome II CDS631210 1200 - 0.385
NA VF1450 ATP-dependent DNA ligasechromosome I CDS1603916 858 - 0.391608
NA VF2232 ADP-ribose pyrophosphatasechromosome I CDS2511096 639 - 0.403756
NA VF0799 DNA-binding protein HUchromosome I CDS876307 297 + 0.407407
NA VF2460 ATP-dependent DNA helicase RecGchromosome I CDS2765122 2082 + 0.417867
NA VF2463 bis(5'-adenosyl)-triphosphatasechromosome I CDS2768811 432 - 0.409722
NA VFA0663 integrase/recombinase (XerC/CodV family)chromosome II CDS735545 984 + 0.380081
NA VF1352 hypothetical proteinchromosome I CDS1499175 453 - 0.403974
NA VFA0515 transposasechromosome II CDS591461 654 + 0.302752
NA VFA0151 ATP-dependent RNA helicasechromosome II CDS166800 1503 + 0.407851
NA VF1628 DNA polymerase IIchromosome I CDS1831832 2346 - 0.355072
NA VF1998 DNA repair protein RecNchromosome I CDS2239201 1668 + 0.398082
NA VF1167 exonuclease SbcDchromosome I CDS1297363 1245 + 0.398394
NA VF2496 serine/threonine protein kinasechromosome I CDS2806142 1326 + 0.382353
NA VF0893 hypothetical proteinchromosome I CDS983496 513 - 0.378168
NA VF0010 DNA polymerase III, beta chainchromosome I CDS8843 1101 + 0.405086
NA VFB15 resolvease/recombinasepES100 CDS8774 648 + 0.393519
NA VFB07 DNA repair protein RadCpES100 CDS3771 498 - 0.405622
NA VFA1102 hypothetical proteinchromosome II CDS1245217 804 - 0.35199
NA VF1622 helicase IVchromosome I CDS1822523 2064 - 0.37064
NA VFB45 single-strand DNA binding proteinpES100 CDS34547 351 + 0.37037
NA VFA0753 deoxyribodipyrimidine photolyasechromosome II CDS850670 1440 + 0.376389
NA VF0056 ATP-dependent RNA helicase RhlBchromosome I CDS64060 216 - 0.472222
NA VF1948 ribonuclease HIIchromosome I CDS2183513 624 - 0.407051
NA VF2252 hypothetical proteinchromosome I CDS2533412 711 + 0.420534
NA VFB02 DNA primase TraCpES100 CDS655 984 - 0.364837
NA VF0444 ATP-dependent RNA helicase SrmBchromosome I CDS473441 1242 - 0.42351
NA VFA0513 DNA integration/recombination/invertion proteinchromosome II CDS589765 183 + 0.404372
NA VF0301 replicative DNA helicasechromosome I CDS309895 1398 + 0.424177
NA VF2397 DNA-binding protein HUchromosome I CDS2692477 273 - 0.428571
NA VF0052 Sec-independent protein translocase protein TatDchromosome I CDS59228 762 - 0.393701
NA VF0952 holliday junction DNA helicase RuvBchromosome I CDS1048013 1014 + 0.401381
NA VF1947 DNA polymerase III alpha subunitchromosome I CDS2180034 3480 - 0.409195
NA VF2114 endonuclease IVchromosome I CDS2354487 672 - 0.376488
NA VF0535 RecA proteinchromosome I CDS577808 1047 + 0.406877
NA VF1051 DNA topoisomerase Ichromosome I CDS1161017 2631 + 0.417712
NA VFA0603 hypothetical cytosolic proteinchromosome II CDS684925 285 - 0.329825
NA VFA0016 DNA polymerase III epsilon subunit (3'-5' exonuclease)chromosome II CDS17141 639 + 0.381847
NA VF0925 ribonuclease Tchromosome I CDS1021265 669 - 0.38565
NA VF2212 endonucleasechromosome I CDS2493560 372 + 0.392473
NA VF0012 DNA gyrase subunit Bchromosome I CDS11054 2418 + 0.421836
NA VF1734 DNA polymerase III, delta' subunitchromosome I CDS1961208 807 - 0.364312
NA VF0950 crossover junction endodeoxyribonuclease RuvCchromosome I CDS1046735 522 + 0.436782
NA VF2227 topoisomerase IV subunit Achromosome I CDS2504936 2277 - 0.410189
NA VFA0135 DNA helicase IIchromosome II CDS148697 1863 - 0.340848
NA VFA0542 superfamily I DNA helicases and helicase subunitschromosome II CDS623184 4065 + 0.407134
NA VF1049 putative DNA methylasechromosome I CDS1159028 858 - 0.409091
NA VF0635 conserved hypothetical proteinchromosome I CDS692650 234 + 0.358974
NA VF0990 serine/threonine protein kinasechromosome I CDS1092502 960 - 0.341667
NA VFB46 DNA topoisomerase IIIpES100 CDS34953 1995 + 0.414035
NA VF1007 primosomal replication protein N'chromosome I CDS1114525 552 - 0.402174
NA VF2325 DNA mismatch repair protein MutLchromosome I CDS2618642 1983 - 0.388301
NA VF1790 ATP-dependent RNA helicasechromosome I CDS2025680 1197 + 0.379282
NA VFA0522 DNA repair protein RadCchromosome II CDS597399 474 - 0.417722
NA VFA0543 hypothetical proteinchromosome II CDS627245 504 + 0.373016
NA VF1989 recombination associated protein RdgCchromosome I CDS2228535 915 + 0.395628
NA VF1465 superfamily I DNA and RNA helicaseschromosome I CDS1625447 1404 + 0.388177
NA VF0450 single-stranded-DNA-specific exonuclease RecJchromosome I CDS479681 1740 + 0.404023
NA VF2483 integrase/recombinase (XerC/CodV family)chromosome I CDS2790064 912 - 0.408991
NA VF2454 hypothetical proteinchromosome I CDS2761365 603 + 0.394693
NA VF1482 exodeoxyribonuclease Ichromosome I CDS1643557 1425 + 0.403509
NA VFA0625 hypothetical proteinchromosome II CDS704646 450 - 0.337778
NA VF0130 formamidopyrimidine-DNA glycosylasechromosome I CDS147452 819 + 0.387057
NA VF0455 DNA mismatch repair protein MutHchromosome I CDS486085 669 - 0.408072
NA VFA0460 transcription-repair coupling factorchromosome II CDS529000 1902 - 0.423239
NA VF1713 ATP-dependent helicase, DinG familychromosome I CDS1931504 1959 - 0.404288
NA VF0270 superfamily II DNA/RNA helicases, SNF2 familychromosome I CDS274361 2859 + 0.409934
NA VFA0553 ATP-dependent RNA helicasechromosome II CDS637578 1383 + 0.388286
NA VFA0401 hypothetical proteinchromosome II CDS455948 1470 - 0.396599
NA VF0936 excinuclease ABC subunit Bchromosome I CDS1031618 2031 + 0.386017
NA VFA1129 hypothetical proteinchromosome II CDS1268456 11415 - 0.39378
NA VF1758 integration host factor beta-subunitchromosome I CDS1987422 282 - 0.41844
NA VF2085 DNA repair protein RecOchromosome I CDS2328236 717 - 0.412831
NA VF0422 A/G-specific adenine DNA glycosylasechromosome I CDS451444 1428 - 0.40126
NA VF1626 excinuclease ABC subunit Cchromosome I CDS1829185 1827 - 0.378763
NA VFA0815 DNA-3-methyladenine glycosylasechromosome II CDS921220 570 - 0.333333
NA VF0498 DNA polymerase III, psi subunitchromosome I CDS535975 402 + 0.393035
NA VF1237 integration host factor alpha-subunitchromosome I CDS1379124 297 + 0.417508
NA VF0734 DNA polymerase IVchromosome I CDS799555 1098 + 0.367031
NA VF1641 DNA topoisomerase IIIchromosome I CDS1847112 1971 - 0.408422
NA VF2228 topoisomerase IV subunit Bchromosome I CDS2507215 1881 - 0.424242
NA VF2514 DNA polymerase III, epsilon chainchromosome I CDS2826267 717 + 0.408647
NA VF1890 NAD-dependent DNA ligasechromosome I CDS2129887 2007 - 0.409068
NA VFA0395 hypothetical proteinchromosome II CDS447464 1635 - 0.382875
NA VF0751 DNA polymerase III, delta subunitchromosome I CDS818592 1035 - 0.384541
NA VFA0127 hypothetical proteinchromosome II CDS143893 486 + 0.372428
NA VF0582 exodeoxyribonuclease V beta chainchromosome I CDS637248 3627 + 0.409981
NA VF1168 exonuclease SbcCchromosome I CDS1298604 3681 + 0.408313
NA VF1009 ATP-dependent helicase, DinG familychromosome I CDS1115926 2085 - 0.383693
NA VFA0408 phosphohydrolase (MutT/nudix family protein)chromosome II CDS463202 528 + 0.352273
NA VF0068 DNA helicase IIchromosome I CDS77541 2202 + 0.429609
NA VF0009 chromosomal replication initiator protein DnaAchromosome I CDS7401 1410 + 0.407092
NA VF1583 exodeoxyribonuclease IIIchromosome I CDS1777121 807 + 0.390335
NA VF1538 hypothetical proteinchromosome I CDS1723100 2355 + 0.379193
NA VF1144 putative ATP-dependent RNA helicase RhlEchromosome I CDS1270231 1296 + 0.405093
NA VF2403 NADH pyrophosphatasechromosome I CDS2697623 759 - 0.370224
NA VF0136 3-deoxy-D-manno-octulosonic acid kinasechromosome I CDS153863 705 + 0.404255
NA VF2192 mutator MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase)chromosome I CDS2469462 402 - 0.350746
NA VF1439 putative ATP-dependent RNA helicase RhlEchromosome I CDS1593953 1266 - 0.402054
NA VFA0512 hypothetical proteinchromosome II CDS589427 306 + 0.395425
NA VFA0652 hypothetical proteinchromosome II CDS726046 1026 + 0.304094
NA VFA1158 hypothetical cytosolic proteinchromosome II CDS1301438 1641 + 0.388178
NA VF0126 DNA repair protein RadCchromosome I CDS145008 675 + 0.408889
NA VF0437 endonuclease Ichromosome I CDS464515 705 - 0.407092
NA VF2274 primosomal protein N'chromosome I CDS2562411 2214 + 0.410117
NA VF0341 excinuclease ABC subunit Achromosome I CDS368760 2826 - 0.404105
NA VF0815 SeqA proteinchromosome I CDS894288 543 + 0.399632
NA VF2391 DNA-binding protein Fischromosome I CDS2686837 375 + 0.384
NA VFA0846 hypothetical proteinchromosome II CDS955271 1191 + 0.36272
NA VF1685 recombination protein RecRchromosome I CDS1899689 603 - 0.429519
NA VFA0349 DNA polymerase III, epsilon chainchromosome II CDS390260 780 - 0.373077
NA VF0594 exodeoxyribonuclease IXchromosome I CDS652357 780 - 0.407692
NA VFA0126 DNA-3-methyladenine glycosylasechromosome II CDS142995 708 - 0.416667
NA VFA1157 ATP-dependent DNA helicase RecQchromosome II CDS1300510 819 + 0.365079
NA VF2382 DNA polymerase III, epsilon chainchromosome I CDS2679191 642 + 0.380062
NA VF2041 DNA integration/recombination/invertion proteinchromosome I CDS2275570 978 + 0.396728
NA VF0864 hypothetical proteinchromosome I CDS949076 1725 - 0.408696
NA VF0581 exodeoxyribonuclease V gamma chainchromosome I CDS633537 3420 + 0.415789
NA VF0055 ATP-dependent RNA helicase RhlBchromosome I CDS62978 1032 - 0.426357
NA VF1733 putative deoxyribonuclease YcfHchromosome I CDS1960448 771 - 0.367056
NA VFA0581 RstAchromosome II CDS663940 1155 - 0.374892
NA VF2541 DNA processing proteinchromosome I CDS2869577 1110 - 0.431532
NA VFA0132 hypothetical proteinchromosome II CDS147807 237 + 0.375527
NA VF0433 hypothetical cytosolic proteinchromosome I CDS461651 426 - 0.410798
NA VF0456 bis(5'-nucleosyl)-tetraphosphatase(asymmetrical)chromosome I CDS487351 513 + 0.423002
NA VF1334 oxalate/formate antiporterchromosome I CDS1484982 798 + 0.365915
NA VFA0871 hypothetical proteinchromosome II CDS984628 480 - 0.25625
NA VFB51 hypothetical proteinpES100 CDS41985 516 + 0.352713
NA VF0583 exodeoxyribonuclease V alpha chainchromosome I CDS640867 2019 + 0.406637
NA VF0534 DNA mismatch repair protein MutSchromosome I CDS574498 2760 - 0.405072
NA VF0074 DNA polymerase Ichromosome I CDS86559 2799 + 0.405145
NA VF1500 ATP-dependent helicase HrpAchromosome I CDS1661274 3840 - 0.4
NA VF0713 exodeoxyribonuclease VII small subunitchromosome I CDS781089 243 - 0.395062
NA VF2521 ATP-dependent DNA helicase repchromosome I CDS2836217 2016 - 0.400298
NA VF0353 single-strand DNA binding proteinchromosome I CDS384918 534 + 0.464419
NA VF1044 RNA-directed DNA polymerasechromosome I CDS1153921 1188 + 0.324074
NA VF2163 ATP-dependent helicase HrpBchromosome I CDS2437439 2466 - 0.380779
NA VF1495 hypothetical cytosolic proteinchromosome I CDS1656474 1683 - 0.402258