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# Streptococcus pyogenes phage 5005.3

>M5005_Spy0221 ribonuclease M5
MQRGYSSLTEKINIQEVLVVEGKDDTANLRRFYEVDTYETRGSAITEEDL
ERINRLNDLRGVIVLTDPDYNGERIRKLIMAAVPTARHAFLNRNEAVPSS
KSKGRSLGVEHANFEDLQKALAHVTQQYDDESYFDIRQTDLIRLGLLMAS
DSRKRREYLGEKLRIGYANGKQLLKRLELFGITLAEVEEVMETYEE
>M5005_Spy1364 ATP-dependent RNA helicase
MSFKDYHFKQYVQQALEEIGFVNPTEVQKRLIPIVNSGRDLVGESKTGSG
KTHTFLLPIFEKLDEAKAEVQVVITAPSRELATQIFDACKQIAKHFQEEI
RLANYVGGTDKLRQIEKLKDSQPHIVIGTPGRIYDLVKSGDLAIHKATTF
VVDEADMTMDMGFLDTVDKIAASLPKSVQILVFSATIPQKLQPFLKKYLT
NPVIEQIKTKTVIADTIDNWLVSTKGRDKNGQLLEILKTMQPYMAMLFVN
TKERADDLHAFLTANGLKVAKIHGGIPPRERKRIMNQVKKLDFEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGMAGTAITLYQPSD
DSDIKELEKMGIAFTPKVLKNGEFQDTYDRDRRQNREKAYQKLDTEMIGL
VKKKKKKVKPGYKKKIQWAVDEKRRKERRAENRAKGRAERKAKKQHF
>M5005_Spy1090 transposase
MKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIV
QKCKNHYYSPELKQEIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYK
KNGYTILEKPRGRPSKMGRKRKKNLEEMTEVERLQKELEYPRAENAVLKK
LREYRLRDEVKLKEQQKSFKH
>M5005_Spy1767 transposase
MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMED
FIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTS
LDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSN
EIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQE
TLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDIKWL
CQNYPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRG
HWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKK
DLSYRRKQRYISVHLEDYLVQLFGERG
>M5005_Spy1824 phosphohydrolase
MKDLLKQYQAKPLGEEKRYAVFLPLILVNDDWHVLYEVRSQHISQPGEVS
FPGGQVENQETLQEAAIRETVEELTVDASQIQLWGEIDYLVQSSRTIHCF
VGQLVVDDWKSIQPNEEVDKVFIVPLRQLLFTDPVYYRLEVTPIETTDFP
FDRIRNGKYYQFSQEYRSIPFYENLEETIWGMTAQFTKCLTDILNDESIA
KKNPSDIEKSKGR
>M5005_Spy1444 adenine-specific methyltransferase
MEIKCGNCLELLAELTDGLIDMVITDPPYNISVKNNFATMGRTGIDFGDW
DKGFDLLSWIDIASQKLTKNGGMIIFNDWKNLGDIARHCEKNGLVVKDIF
RWVKDNPMPRNRDRRYITDSEYGVWVVRKKSKWVFNRKSEKYDRPEYRYP
VVAGAEKTQHPTQKPVALMKDIITRHTTKGAVVLDPFMGSGSTGVACLLT
GRDFIGYELNKDYFNIANKRIAELTGNGGVGMNIIHRMENGIDAVGDLTT
YAVPCCPECKNETYSQKHCPFCGENLMEVANEN
>M5005_Spy0258 transposase
MMILLFILVMSTYWKNSKKMRSIIRLLKNLEVREYWVSSDIKWLCQNYPK
WHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRGHWQIES
MHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRR
KQRYISVHLEDYLVQLFGERG
>M5005_Spy0298 transposase
MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMED
FIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTS
LDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSN
EIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQE
TLYDDIALYFSDVNLLEELQENAQYYQTVEKSRS
>M5005_Spy0456 plasmid stabilization system antitoxin protein
MAKTGTLNLRVDDSVKSAADDILKRLGIPMSTAIDMFLNQIILTGGIPFD
VSLPEAPQRVNVDYMSQEKFYDKLITSFEDAKTGNRQDVREFLFQLKENA
>M5005_Spy0172 transposase
MKFNQETKVKIYELRQMGESIKSISKKFDMAESDLKYMIRLIDRYGVTIV
QKCKNHYYSPELKQEIINKVLIDGQSQKQTSLDYALPTSSMLSRWIAQYK
KNGYTILEKPRGRPSKMGRKRKKNLEEMTEVERLQKELEYPRAENAVLKK
LREYRLRDEVKLKEQQKSFKH
>M5005_Spy1285 hypothetical cytosolic protein
MMVLVTYDVNTETPAGRKRLRHVAKLCVDYGQRVQNSVFECSVTPAEFVD
IKHRLTQIIDEKTDSIRFYLLGKNWQRRVETLGRSDSYDPDKGVLLL
>M5005_Spy0800 DNA-cytosine methyltransferase
MKFLDLFAGIGGFRLGLINQCHECIGFCEIDKFARQSYKAIYETEGEIEF
HDIRQVTDQDFRQLRGQVDIICGGFSLVKHFHSQADDWDLRALGELSSLR
LLERPNR
>M5005_Spy1128 transposase pseudogene
MNRKGNPYDNALMESFYKTLKRELVNDAHFATIKQAQLEIFKYSETYYNP
KRLHSALGYLSPVEFEKNSYSLA
>M5005_Spy1010 phage protein
MPFFLPRRLVDFEYLGGSGDSTDVEYDRLASQYHKDIDFAFYFVNFGTTK
SEFLELTRREKAFIRKAWEDKQVRESELMRNAVLNAVSNAMRKKSAKFVD
LWKRQQQPANMEIVEAHLEIINKNIADEGKYWVDLVYQANNMTKPSEGAE
NG
>M5005_Spy1796 endonuclease involved in recombination
MRIMGLDVGSKTVGVAISDPLGFTAQGLEIIKIDEEKAEFGFTRLEELVK
QYQVEQFVIGLPKNMNNTNGPRVDASITYGNHIEHLFGLPVHYQDERLTT
VEAKRMLIEQADISRGKRKKVIDKLAAQLILQNYLNRNF
>M5005_Spy1833 transposase
MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMED
FIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTS
LDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSN
EIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQE
TLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDIKWL
CQNYPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRG
HWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKK
DLSYRRKQRYISVHLEDYLVQLFGERG
>M5005_Spy1716 transposase
MLHKEKPDYNRNQYGFYTLDQLVPDEHFLRQVEAVIDFDFIYDLVEDTYS
SDNGRPSLDPVMLVKIPLIQCFYGIRSMRQTIKDIEVNTAYRWFLGLTLD
DKVPHFTTYGKNYSRRFQEKGLIESIFTHIVGLCINTGLIDPTEIFIDGT
HIKAAANNRKFINREVEKQAKFMSEQLEIEINRDREKHGKKPLGPAKELE
PVAKKISTTDPESGWFHKGDHKEVFAYSAQVACDKYGWALAYSVEAGNIH
DSQAFPALFAKLEPLKPQFIIADSGYNVPSIAKFLIDKEITPVLPYTRPR
GKKDLLRPKELIYDEHFDCVICPEHQALTYRTTTREGYREYKSDPVICAN
CPLLSVCTTSKNYQKVVTRHIWKDYLAQPRNTTISAIRERKASPKWKIRL
D
>M5005_Spy0165 transposase
MKSLYTHTFKTALNPLSATKIRHRCPPAASFNDKLEATNRLIKGIKYNAF
RFQNFDNFKTKILIALNIQKERTNLILSRC
>M5005_Spy1605 transposase
MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMED
FIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTS
LDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSN
EIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQE
TLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDIKWL
CQNHPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRG
HWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKK
DLSYRRKQRYISVHLEDYLVQLFGERG
>M5005_Spy0188 transposase
MMILLFILVMSTYWKNSKKMRSIIRLLKNLEVREYWVSSDIKWLCQNYPK
WHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRGHWQIES
MHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRR
KQRYISVHLEDYLVQLFGERG
>M5005_Spy0396 transposase
MTSLETTENLLTFYQFPHYIWSSIYSTNLIESLNKEIKRQSKKEGGFSK
>M5005_Spy1287 hypothetical protein
MVYAEDDYLMLSGIQHFQFCKRQWALIHIEQQWLDNEATAHGQVLHTKAD
NPYIKEKRKELLVSRAMPISSAELGLSGIMDVVEFYKDDQGVSLRGKRGK
WLPKVVEYKRGKPKKDTRDIVQLVAQTMCLEETLDCDINEGCLYYHSVNQ
RVIVPMTSALRQEVKELAAEMHEVYQSQMLPKAAYFKNCQLCSLVDICKP
RLSKKTRSVSRYINEAMTSEEMDL
>M5005_Spy0816 integrase pseudogene
MKVHTTLEKDENGNWYRKDQTKTPAGERLIELDDVTIVVLENWRRNQVVN
TDTDFIISRFGEPFCKSTICRVIKHKAQSIGVPVITGKGLRHSYASYLIN
VLKKDILYVAKCMGHADKSTTLNTYSH
>M5005_Spy0363 phosphohydrolase
MKFEEKTLKRQTVFDGHIFKVVVDDVELPNNLGQSKRELIFHRGAVAVLA
ITPERKIVLVKQYRKAIERVSYEIPAGKLEIGEEGSKLKAAARELEEETA
YTGTLTFLYEFYTAIGFCNEKITLFLATDLIQVANPKPQDDDEVIEVLEL
TYQECMDLVAQGKLADAKTLIALQYYALHFGGEQ
>M5005_Spy0395 transposase
MNHSIKKSSDKARRRVVFPNEEALERCLVSIFEDYNIKFGARIHKGFGAC
FDTLDSLFD
>M5005_Spy0387 uracil DNA glycosylase superfamily protein
MDDLTKAIMADEANLSYTERGIFPLYDAPQTARIIIVGQAPGIVAQGTKL
YWNDRSGIRLRDWLGVDNDTFYHSGLFGIIPMDFYYPGKGKSGDLPPREG
FAAKWHPPLRALMPEVELTILVGRYAQDFYLGNKAYKTLTETVRHFEDYL
PDYFPLVHPSPRNQLWLAKNPWFEQDLLPILQKRVEAILTK
>M5005_Spy0112 transposase
MTCPVETEDITYRRKKIKGRRQAILAQFEPELVHHELIGDSCTCPDCHGT
LTEIGSVVQRQELVFIPAQLKRINHVQHAYKCQTCSDNSLSDKIIKAPVP
KAPLAHSLGSASIIAHTVHQKFTLKVPNYRQEEDWNKLGLSISRKEIANW
HIKSSQYYFEPLYDLLRDILLSQEVIHADETSYRVLESDTQLTYYWTFLS
GKHEKKGITLYHHDKRRSGLVTQEVLGDYSGYVHCDMHGAYRQLEHAKLV
GCWAHVRRKFFEATPKQADKTSLGRKGLVYCDKLFALEAEWCELPPQERL
VKRKEILTPLMTTFFDWCREQVVLSGSKLGLAIAYSLKHERTFRTVLEDG
HIVLSNNMAERAIKSLVMGRKNWLFSQSFEGAKAAAIIMSLLETAKRHGL
NSEKYISYLLDRLPNEETLAKREVLEAYLPWAKKVQTNCQ
>M5005_Spy1223 DNA-binding protein HU
MANKQDLIAKVAEATELTKKDSAAAVDAVFSTIEAFLAEGEKVQLIGFGN
FEVRERAARKGRNPQTGAEIEIAASKVPAFKAGKALKDAVK
>M5005_Spy1146 DNA polymerase III, delta subunit
MIAIEKIEKLSKENLGLITLVTGDDIGQYSQLKSRLMEQIAFDKDDLAYS
YFDMSEAAYQDAEMDLVSLPFFAEQKVVIFDHLLDITTNKKSFLKEKDLK
AFEAYLENPLETTRLIIFAPGKLDSKRRLVKLLKRDALVLEANPLKEAEL
RTYFQKYSHQLGLGFESGAFDQLLLKSNDDFSQIMKNMAFLKAYKKTGNI
SLTDIEQAIPKSLQDNIFDLTRLVLGGKIDAARDLIHDLRLSGEDDIKLI
AIMLGQFRLFLQLTILARDVKNEQQLVISLSDILGRRVNPYQVKYALKDS
RTLSLAFLTGAVKTLIETDYQIKTGLYEKSYLVDIALLKIMTHSQK
>M5005_Spy0294 transposase
MESIVLRKETYQTYSFKIKQEIINKVLQNGQSLVSVSLDYTLPILKI
>M5005_Spy0307 DNA integration/recombination/invertion protein
MKSYIEPFIASKALSQNSQKAYRYDLQQFCQLIGERVNQDKLLLYQNSIA
NLSLSAKKRKLSTANQFLYYLYQIKYLNSYFRLTDTMKVMRTEKQQAAII
NTDIFYQKTPFVWGQLISLLILELGLTPSEVAGIEVANLDLNFQMLTLKT
KKGVRVLPLSQILIPFLEQQLVGKEVYLFEHRGIPFSRQWFFNHLKTFVR
SIGYEGLTAQKLREQFILKEKLAGKSIIELSDILGLKSPMTLEKYYKS
>M5005_Spy1447 phage-related DNA helicase
MRLHEYQEYAKTWIVEHPYCGLLLDMGLGKTLTTLSAIDEIQNIFSEDHK
ILIVAPKKVAEETWPTEIEKWHFDFTYSKVLGSEGKRIEALETEADIYLI
NRENVTWLVEYYKTKWPFTFVVIDELSSFKSSKSKRFRALRKVRPKVQRL
VGLTGTPAPNSLIDLWPQIYLMDRGDRLETSQTRFKDKYFVPDKRNGPII
YSWALRDGAEAEIYNKIEDICVSMKAKDYLKLPPRTNNVVSVKLSNMKAY
KQLEADLVLEFKDKEISAANSAVLANKLLQMANGAIYDDDKSTVAIHDDK
LDALEDIVEESQGQPILVFYQYQHDFERLKKRFPQAEELTSVDKWNSGKI
PILLCHPQSAGHGLNLQKGGHIIVWFGLTWSLEYYQQANARLDRQGQTEP
VIVHHIVAENTVDEKVLRILQGKEKNQNALLEAVKAQLGV
>M5005_Spy0391 phosphohydrolase
MRKNTNIVKRDHMPQDYISYIRSKVGHDKIILNFAGGILTNDDGKVLMQL
RGDKKTWTIPGGTMELGESSLETCKREFLEETGIEVEAVRLLNVYTHFEE
VYPNGDAVQTIVFIYELTAVSDMAIDNFHNEETLKLQFFSHEEIAELESV
SAKHRLMLEEYFSDSFAMGH
>M5005_Spy1537 transposase
MIDFIISIDDCAVELDSRQSWKIRSPLSTILFLVFVCQLAGIETWKEMED
FIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTS
LDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSN
EIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQE
TLYDDIALYFSDVNLLEELQENAQYYQTVEKSRS
>M5005_Spy0168 transposase
MASSTLKIHPNSLYRWIQEYEKYGESAFPGHGSALRHAQFETKKLEKEHK
LLQEELALLKKFQVFLKPNRK
>M5005_Spy0777 collagen-like surface protein
MLTFGGASAVKAEENEKVREQEKLIQQLSEKLVEINDLQTLNGDKESIQS
LVDYLTRRGKLEEEWMEYLNSGIQRKLFVGPKGPAGEKGEQGPTGKQGER
GETGPAGPRGDKGETGDKGAQGPVGPAGKDGQNGKDGLPGKDGKDGQNGK
DGLPGKDGKDGQDGKDGLPGKDGKDGQDGKDGLPGKDGQPGKPAPKTPEV
PQNPDTAPHTPKTPRIPGQSKDVTPAPQNPSNRGLNKPQTQGGNQLAKTP
AAHDTHRQLPATGETTNPFFTAAAVAIMTTAGVVAVAKRQENN
>M5005_Spy0881 hypothetical cytosolic protein
MIFPSLPYWKDLPDLDLYLDQVLLYVNQCTDFSEVSDNKSLTASMINNYV
KHGYVTKPIKKKYQKQQLARLIAISLFKTVFPIQDISRVLEELQAQADSE
SLYNTFVTCWNQKAPIEEDIPPIVQVACQTVKDYHKTIYLLQEVTQ
>M5005_Spy0376 transposase
MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMED
FIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTS
LDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSN
EIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQE
TLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDIKWL
CQNHPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRG
HWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKK
DLSYRRKQRYISVHLEDYLVQLFGERG
>M5005_Spy1043 phage protein
MADNKKYYYLKLKENFFESDEAIILESMPDGYIYSNILLKLYLRSLKNDG
LLMFNNLIPYNAQMLATITRHQIGTVEKAIQIFRDLQLIEILDNGAIYMT
NIQNFVGKSSTDADRKRIEYAKAKQLGQISMKCAEKSPPEIEIELDKERE
LDKKIDINIDKELEVEEEIKDSSSAANVNNLKIISDYFQQEIGILSPNQF
EQLSDYITITKMEVDVVKEAITRAADNSKRSFGYVNSILRNWRQNGILTM
VKVEEEQRQFQSRKSKQEEVSEYDTW
>M5005_Spy1536 transposase
MMILLFILVMSTYWKNSKKMHSIIRLLKNLEVREYWVSSDIKWLCQNHPK
WHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRGHWQIES
MHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRR
KQRYISVHLEDYLVQLFGERG
>M5005_Spy0167 transposase
MNSHHACQTLQVSRSGFYAYLKRRPSSRHVENEALKEMIKAIFYEHKERY
GSVRITQELCRRGIHVNYKRVGRLLHQLGLYAKGSRYQYKYYNRRRSSLT
RPNLVNQCFQATGKNKLWLGDLTYIPTQEGILYVSVFIDVYSRKIVGWAM
GRRMQDKLVTEAFNQAYNREKPKEGVIVHTDQGSQYTGA
>M5005_Spy1151 hypothetical protein with endo/excinuclease domain
MTTKKAYMYVLECVDKTLYTGYTTDLKKRLATHNAGKGAKYTRYRLPVSL
LYYEVFDSKEAAMSAEALFKKRKTRSQKLAYIATHQKEKKNH
>M5005_Spy1042 phage replication protein
MILGDEDALAKIAISYQQNTKKEDAVCEKHGCRYITVLKTGLTVCPDCHR
EELDNQNALHVQKQYERELENKRLYYLKKLSIMDDELENASFDNFRADTA
KHKEMLYWAKTMANDWFSGGKGNIIMTGKAGRGKSHLAYSIIRGLSDKTK
KLGLLVNVTDLLSEIKRDFSKEAFWMDKLKDVDYLVLDDLGAEKVSDWST
SIIYSLLNKRTNTIITTNLTPAEIRKIYGERIASRIRKGCDKSHIMEFDG
MEDERMKLWN
>M5005_Spy1215 phage protein
MLNIDTQFVDTIGKILSDYVSHSEITRMGEVLGYPQNDQNSGFNKHKRVH
NLMSDILNRTQNTDNIKLVIEYVCNPLRYINEVSIFEQLRTAINIPLSLK
GLIVSDSGQIVTTTTSKTLSEAKKRFETLDSRLKELKVHPHVLKFCTQEL
LQENYFHAVFEASKGVFHRIRLLTGSAMDSASLIDQCFKPGEPIVIINGN
KLQTLDEQSEYKGLKNLLLAIAHLYRNSKAHKLKYYNPDNLNDALTALTL
MSLAHNLLDSCSNTRRLD
>M5005_Spy0166 transposase
MSRKGNPYDNALMESFYKTLKRELVNDAHFATIEQAQLEIFKYSETYYNP
KRLHSALGYLSPVEFEKIVTH
>M5005_Spy1126 transposase pseudogene
MVSSTLEIHPNSLYQWIQEYEKYGESAFPGHGSALRHAQFKTKKLEKEHK
LLQEELALLKKFQVFLKPNRK
>M5005_Spy0093 adenine-specific methyltransferase
MTFEKIEEAYQLLLENCQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVA
QNSDKLKALCLTKEEWRKAYQFLFIKAAQTEQLQANHQFTPDAIGFILLY
LLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKSLDYVGIELDDLLIDLS
ASIAEIMDSSAHFIQEDAVRPQLLKESDIVISDLPVGYYPNDDIAKRYKV
ASSDKHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSPQSQLLKQWLKD
YAQVVTLITLPDSIFGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAEN
IHDFMENFKKWKLSNVN
>M5005_Spy1233 exodeoxyribonuclease VII large subunit
MADYLTVTHLTKYLKLKFDRDPYLERVYLTGQVSNFRKRPTHQYFSLKDE
SAVIQATMWAGVYKKLGFDLEEGMKINVIGRVQLYEPSGSYSIVIEKAEP
DGIGALALQFEQLKKKLTAEGYFEQKHKQPLPQFVSKIGVITSPSGAVIR
DIITTVSRRFPGVEILLFPTKVQGDGAAQEVVANIRRANQREDLDLLIVG
RGGGSIEDLWAFNEEIVVQAIFESQLPVISSVGHETDTTLADFVADRRAA
TPTAAAELATPITKTDLMSWIVERQNRSYQACLRRIKQRQEWVDKLSQSV
IFRQPERLYDAYLQKIDRLSMTLMNTMKDRLSSAKENKVQLDHALANSQL
QTKIERYQDRVATAKRLLMANMASQYDSQLARFEKAQDALLSLDASRIIA
RGYAMIEKNQALVASVSQITKGDQLTIKMRDGQLDVEVKDVKNENI
>M5005_Spy1699 ATPase, AAA family
MPDHLALRMRPKTISEVIGQKHLVGEGKIIRRMVEANRLSSMILYGPPGI
GKTSIASAIAGTTRYAFRTFNATIDSKKRLQEIAEEAKFSGGLVLLLDEI
HRLDKTKQDFLLPLLENGTIIMIGATTENPFFSVTPAIRSRVQIFELEPL
SNEDIKTAIQLAISDKERGFPFLVTIDDEALDFIVTATNGDLRSAYNSLD
LAVMSTSPNEDGSRHISLETMENSLQRSYITMDKNGDGHYDVLSALQKSI
RGSDVNASLHYAARLVEAGDLPSLARRLTIIAYEDIGLANPDAQVHTVTA
LDAAQRIGFPEARILIANVVIDLALSPKSNSAYLAMDAALADLRTSGNLP
IPRHLRDGHYAGSKDLGNAKDYLYPHAYPEKWVKQQYLPDKLVGHHYFEA
NETGKYERALGSNKERIDKLSD
>M5005_Spy0257 transposase
MIDFIISIDDCAVELDSRQSWKIRSPLSTILFLVFVCQLAGIETWKEMED
FIEMNEPLFATYVDLSEGCSSHDTLERVISLVNSDRLKELKVQFEQSLTS
LDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSN
EIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQE
TLYDDIALYFSDVNLLEELQENAQYYQTVEKSRS
>M5005_Spy0113 transposase
MTIRLNDLGQVYLVCGKTDMRQGIDSLAYLVKSQHELDLFSGAVYLFCGG
RRDRFKALYWDGQGFWLLYKRFENGKLAWPRNRDEVKCLTAVQVDWLMKG
FFISPNIKISKSHDFY
>M5005_Spy0883 ribonuclease HII
MPTSIKAIKESLEAVTSLLDPLFQELATDTRSGVQKALKSRQKVIQAELA
EEERLEAMLSYEKALYKKGYKAIAGIDEVGRGPLAGPVVAACVILPKYCK
IKGLNDSKKIPKAKHETIYQAVKEKALAIGIGIIDNQLIDEVNIYEATKL
AMLEAIKQLEGQLTQPDYLLIDAMTLDIAISQQSILKGDANSLSIAAASI
VAKVTRDQMMANYDRIFPGYGFAKNAGYGTKEHLQGLKAYGITPIHRKSF
EPVKSMCCDSTNP
>M5005_Spy0297 transposase
MMILLFILVMSTYWKNSKKMRSIIRLLKNLEVREYWVSSDIKWLCQNYPK
WHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRGHWQIES
MHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKKDLSYRR
KQRYISVHLEDYLVQLFGERG
>M5005_Spy0397 transposase
MTQFTTELLNFLAQKQDIDEFFRSSLEIAMNDLLQVELSAFLGYEPYEKE
GYNTGNSRNGTYSRQFETKYGLVNLIIPRDRNGEFSPVLLPSYARREDHL
EEIVIKLYQTGVTTREISDIIKRMYGDHLFLSGSLVTKRL
>M5005_Spy1441 phage terminase small subunit
MSLKVRQIVSCLFVMLGGDGKLSKLTLKQKRFADEYIISANATAAAIKAG
YSKKTARSIGQENLTKPDIKAYIDERLEKLESEKIATQEEVLQYLTSIMR
GDQQEKTLISVGEFGQKIVDIDVGAKDRIKAAELLGKRYRLFTDKVEMDV
SSDVTINVGEWDDD
>M5005_Spy1351 methyltransferase
MKETFRLVATAAAGLEAVVGKEVRALGFDCQVENGKVYFEGDVEAIVKTN
LWLRAADRIKIIVGQFPARTFEELFQGVFALDWENYLPLGAKFPISKAKC
VKSKLHNEPSVQAITKKAVVKKLQKHFHRPEGVPLQEVGSTFNIEVSILK
DQATIMIDTTGSSLFKRGYRVQKGGAPIKENMAAAILALSNWFPDKPLVD
PTCGSGTFCIEAAMIGMNIAPGFNRSFAFEEWSWVDKDMVQQVRDDAEQE
ANYEIELDISGFDIDGRMIEIAKSNAEEAGLSDVITFKQMRLQDFRTDKV
NGVVISNPPYGERLLDDKAVDILYNEMGQTFAPLKTWSKFILTSDELFEL
KYGQKADKKRKLYNGTLKVDLYQFYGERVKRHLI
>M5005_Spy0557 transposase
MSAIIRQSTSKRISDKRGIYLVEKLVSLAKQSYFTVTKTSPMIEEVRYYA
KELLRLSERRQAIFDKMVASAQPLPEDKILRSIPSIVETTATSIIGELGA
IRRFQSANQINAFIGIDFRHYESGNYLAQEHITKRGNPYAPKILFKCIHD
IAFASHTNPCHIADFYEKRKRQSQTASTKPHTIASRHCLVRQCFTS
>M5005_Spy0885 DNA topoisomerase I
MGTKTTTKPKTGTKKSTTKKKSTAKKNLVIVESPAKAKTIEKYLGRSYKV
VASVGHIRDLKKSSMSIDFDNNYEPQYINIRGKGPLINSLKKEAKAAKKV
YLASDPDREGEAISWHLSHILGLDPQDNNRVVFNEITKDAVKHAFVEPRQ
IDMDLVDSQQARRVLDRIVGYSISPILWKKVKKGLSAGRVQSVALKLIID
RENDIKAFVPKEYWSIDGLFKKGTKKFQATFYGINGKKTKLDNNNDVKEV
LAKLTNEDFLVSKVDKKERRRNAPLPYTTSSLQQDAANKINFRTRKTMMV
AQQLYEGIHLGENGTQGLITYMRTDSTRISPVAQNDAAQFIINRFGANYS
KHGNRVKNTSGVQDAHEAIRPSSVNHTPDSIAKYLNKDQLKLYTLIWNRF
VASQMTAAVFDTVKVNLEQNGVIFVANGSQMKFDGYMAVYNDSDKNKMLP
EMAEGETVKKISTSPEQHFTQPPARYSEATLIKTLEENGVGRPSTYAPTL
EVIQRRYYVKLSAKRFEPTELGEIVNKLIVEFFPDIVDVAFTAEMEGKLD
QVEIGEEQWQHVIDQFYQPFVKELNKAESEIEKIQIKDEPAGFDCDVCGH
PMVIKLGRFGKFYACSNFPECRNTKAITKEIGVTCPVCHKGQVIERKTKK
NRIFYGCDQYPDCEFISWDLPIGRACPKSGDYLIEKKVRGGKQVMCSNET
CDYKEEKIK
>M5005_Spy1839 phosphohydrolase
MIVRNGKNFLTRDADDQYYTIGGTSLVGEKTHETVLRETLEEVGIRAKVN
QLAFMVENHFDIDDVFWHNIEFHYLVSPLEDPKLEMIENASDRFVNGFQS
INWIK
>M5005_Spy1034 phage protein
MVKFIIPIEPKPQKRPRFSRWSGAYEDGDMMAWRKQVTDYVKNNYEGPYF
DDGLKVDVTFYLKAPELVSKKPSERAKDKTKQKYQDYINELLYVPKKPDL
DNLEKAVYDSISKSEVVWTDDNIIVEHTTRKLYSPNPRIEVKINEL
>M5005_Spy0467 transposase
MYRVLRVNRSTYYKFLKHKPSKRELDNQIYRKQILEIYTKANKRLGVKSI
KVILQRDYDTKISEGRIYRLMKNMALPKMATVKPKTALKRTQKTYPQNLL
NQKFNPDKPNQVWSTDFTYISIGYKKYVYLCAILDLYSRKCIAWKLSHRM
DAKLACDTLELALNKRKIEGTLLFHSDQGSQFKARELRKIIDDNTIMHSF
SKPGYPYDNAVTEAFFKYLKHRQINQKKYQTGSIRLL
>M5005_Spy1003 phage protein
MLNQGISEQNNERPYMTIDVTLFAQWCVALTAIIVFLKWVSAPVKHVLDN
NKKAMEALESAIVKISDDLKDNNFKWTESKNHRDRLQKVQDQHEIRIGIV
EDRLISHDEQLKTLWKVKEEKK
>M5005_Spy0737 mutator mutT protein/7,8-dihydro-8-oxoguanine-triphosphatase
MTQLATICYIDNGDSLLLLHRNKKENDVHKGKWISVGGKLEAGETPDECA
RREILEETHLTVTEMAFKGIITFPEFTPGHDWYTYVFKVTGFEGDLISDE
ESREGTLEWVPYDQVLEKPTWEGDYDIFKWILEDRSFFSAKFTYDQNNQL
MDKSVTFY
>M5005_Spy1863 transposase
MENKPSSTPISLIVDNVSMKPIDLSKMVSIRKRSKKVMKTNKKTLGKSIE
ERPEYINDRSEFGHWEIDLALGKKTKSEAVMLTLVERQTRYAL
>M5005_Spy1209 DNA replication protein
MTKKELFENFQKNWMRLLSPFEIEDIDKWIDEDNMPVEVVNEALKETVIY
NAPNLRYLNRVLNNWKRQGIDTVEKVEFARLQFENKKLSQNKNQQSNVPS
WSNPDYKEPDLKEFALGSMDGIEDGSGDF
>M5005_Spy0102 single-strand DNA binding protein
MYNKVIAIGRLVAKPELVKTATDKHVARLSLAVNRRFKNASGEREADFIS
VVVWGKLAETLVSYASKGSLMSIDGELRTRKYDKDGQVHYVTEVLCQSFQ
LLESRAQRAMRENNVTNDLVDLVLEEDTLPF
>M5005_Spy1002 N-acetylmuramoyl-L-alanine amidase
MEELIQVITGSALSILTIFAGIVVKLVKDYLLKKGGEKAVKIAEIVARNA
VEAVEQIAYDKDIKGIEKLTEAKIAVRDELSKHNVYLSDKQMEVFIEAAV
KRMNDSWKGQ
>M5005_Spy0254 transposase
MRKQEQDHHKQDVNQKKPEEMTKLERLQEENEYLRTEVAYLKKPRNSV
>M5005_Spy1564 ribonuclease HIII
MNTLVLKIDAILSKHLKKQLAPYTISSQNTYVAFAAKKNGVTVLLYKSGK
LVLQGNGANALAQELNLPVAKTVFEASNNSQDIPIIGSDEVGNGSYFGGI
AVVASFVDPKDHSFLKKLGVDDSKKLSDKTIQQIAPLLEKQIPHQSLLLS
PKKYNELVGKSKPYNAISIKVALHNQAIFLLLQKGIQPKQIVIDAFTSQS
NYEKHLKKEKNHFPNPLTFQEKAESHYLAVAVSSIIARNLFLDNLDQLGQ
DLGYQLPSGAGSASDKVASQLLAAYGMSSLEYSAKLHFANTHKAQALLTK
>M5005_Spy0016 transposase fragment
MLFLQAKIILDCFHIPQRLRQAITRFRIRIINTSAIKPIAYRTLKLY
>M5005_Spy0187 transposase
MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMED
FIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTS
LDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSN
EIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQE
TLYDDIALYFSDVNLLEELQENAQYYQTVEKSRS
>M5005_Spy1091 transposase
MELRNRGFVVNHKKVQRLMKVMGLAARIRRKRKYSSYKGEVGKKADNLIK
RHFEGSKPYEKCYTDVTELALPEGKLYLSPVLDGYNSEIIDFTLSRSPNL
KQVQTMLEKTFPADSYSGTILHSDQGWQYQHQSYHDFLESKGILASMSRK
GNSPDNGMMDSFFGILKSEMFYGLETTYQSLDKLEEAITDYIFYYNNKRI
KAKLKGLSPVQYRTKSFQ
>M5005_Spy0468 transposase
MSTVKRYDEEFKQSLVNLYQTGKTRSELCKDYGVSASALAKWIKQYSQVK
LEDNSVLTAKQIQELQKRNAQLEEENLILKKASAIFMQNLK
>M5005_Spy1642 DNA integration/recombination/invertion protein
MEEFTKPTHKTYSEIFEKWYQAYQDTVEPTTASRTLDLFRLHILPVMGEL
PINKTSPLDC
>M5005_Spy1127 transposase pseudogene
MNSHHTCQTLQVSRSGFYAYLKRRPSSRHVENEALKEMIKAIFYEHKERY
GSVRITQELCRRGIHVNYKRVGRLLHQLGLYAKGSRYQYKYYNRRRSS
>M5005_Spy1712 transposase
MIDFIISIDDCAVELDSRQSWKIRYPLSTILFLVFVCQLAGIETWKEMED
FIEMNEPLFATYVDLSEGCPSHDTLERVISLVNSDRLKELKVQFEQSLTS
LDAVHQLISVDGKTIRGNRGKNQKPVHIVTAYDGGHHLSLGQVAVEEKSN
EIVAIPQLLRTIDIRKSIVTIDAMGTQTAIVDTIIKGKADYCLAVKGNQE
TLYDDIALYFSDVNLLEELQENAQYYQTVEKSRGQIEVREYWVSSDIKWL
CQNYPKWHKLRGIGMTRNTIDKDGQLSQENRYFIFSFKPDVLTFANCVRG
HWQIESMHWLLDVVYHEDHHQTLDKRAAFNLNLIRKMCLYFLKVMVFPKK
DLSYRRKQRYISVHLEDYLVQLFGERG
>M5005_Spy0111 hypothetical protein
MKKSILRILAIGYLLMSFCLLDSVEAENLTASINIEVINQVDVATNKQSS
DIDETFMFVIEALDKESPLPNSVTTSVKGNGKTSFEQLTFSEVGQYHYKI
HQLLGKNSQYHYDETVYEVVIYVLYNEQSGALETNLVSNKLGETEKSELI
FKQEYSEKTPEPHQPDTTEKEKPQKKRNGILPSTGEMVSYVSALGIVLVA
TITLYSIYKKLKTSK
>M5005_Spy1645 DNA integration/recombination/invertion protein
MIEIGVDPVNTAKRLGHASSQMTLDTYSHATAVGEDKSIKQFANCLKNN
>M5005_Spy1286 DNA polymerase
MKKLLNTLYLTQEDFYVTKEGDNIVIKQEGKVLKRFPFRIIDGIVCFSYL
GVSSALVKLCTENQINLSFHTPQGRFCGRYIGSTNGNVLLRREHYRLSDR
EESLEYAKRFILAKISNSRKYLLRFKRDHRQQIDTKLFEAVNDELIWALE
MVQAADNKDSLRGIEGQAANQYFRIFNDLVLTDKKTFYFQGRSKRPPLDC
VNALLSFGYSLLTFECQSALEAVGLDSYVGFFHTDRPGRASLALDLVEEF
RSYIVDRFVFSLINKGQLQKKHFEVKENGSILLTENGRAIFIDLWQKRKH
TEVEHPFTKEKVKLMLLPYVQAQLLAKAIRGDLESYPPFMV
>M5005_Spy0665 transposase
MSRKRNSPDNGMMESFFGILKSEMFYGYENNYKSLEDLEQAITNDIDYYN
DKHIKVKLKGFSSVQYRTKSFT
>M5005_Spy1288 hypothetical cytosolic protein
MLEHKIDFMVTLEVKEANANGDPLNGNMPRTDAKGYGVMSDVSIKRKIRN
RLQDMGKSIFVQANERIEDDFRSLEKRFSQHFTAKTPDKEIEEKANALWF
DVRAFGQVFTYLKKSIGVRGPVSISMAKSLEPIVISSLQITRSTNGMEAK
NNSGRSSDTMGTKHFVDYGVYVLKGSINAYFAEKTGFSQEDAEAIKEVLV
SLFENDASSARPEGSMRVCEVFWFTHSSKLGNVSSARVFDLLEYHQSIEE
KSTYDAYQIHLNQEKLAKYEAKGLTLEILEGL
>M5005_Spy0171 transposase
MLLEILDLSRSTYYYQVKRLAQGDKDIELKHVIREIYDEHKGNYGYRRIH
MELRNRGFVVNHKKVQRLMKVMGLAARIRRKRKYSSYKGEVGKKADNLIK
RHFEGSKPYEKCYTDVTELALPEGKLYLSPVLDGYNSEIIDFTLSRSPNL
KQVQTMLEKTFPADSYSGTILHSDQGWQYQHQSYHDFLESKGILASMSRK
GNSPDNGMMESFFGILKSEMFYGLETTYQSLDKLEEAITDYIFYYNNKRI
KAKLKGFSPVQYRTKSFQ
>M5005_Spy1148 COME operon protein 1
MLDELLIKGKSFLRERYFLPYLISLLLGLFLILSFSFLFWGNRQSKAAVP
ALREISPVKQQVSEEKKEIQEDSSILVDLKGAVQKEGVYKLTASSRVRDV
IELAGGLTSEADKHAINFAEKLTDEQVVYVPKQGEEISVLPRSLVSGKKE
TASKDQSKVHINKASLEELQHIPGIGAKRAQDIIDMRDKLGGFKALEDLR
QVSGIGEKTLEKLKDDIFLD
>M5005_Spy1450 phage-encoded DNA polymerase
MRHLNIDIETYSSNDIKNGVYKYADAEDFEILLFAYSIDGGEVECLDLTR
QSLPEDIKDMLFDDKVRKHAFNAQFERVCLSRYLGLPYYLDPAQWQCTMV
LAQELGLPASLEKCALYLKLAQEKDAAGKNLIKYFSVPCKPTKANGGRTR
NLPEHDPGKWQMFINYCMQDVVVEMAIAEKLESVPVHDREWDYYVCDQRI
NDRGVALDKELVASALYCKDVKMESLSGELKALTGLDNPNSRAQLLPWLK
EHGYSANGLTKADVEQELKKAEGELKRVLELKLQTAMSSLKKYEAMERAM
CSDGRVHGLLQFYGASRTGRWAGRVVQVQNLARNYIKDLDDAREYVKKRD
IDAVEILYDSLNDTLKQLVRTALVAKDGYTFYVSDFSAIEARVIAWFAGE
QWRLDVFSTHGKIYEASASQMFGIPIEEIDKELRQKGKISELALGYQGGP
GALKQMGALNMGVKEEELQGLVDDWRRANKKIVQFWKDVQRAAIKAIKSR
APIKLGKIRFRYRKGFLFITLPSGRNLAYARAKVEPGDYGDKIIYEGQGD
RAYFTAQETYGGKLVENIVQATARDILAEALLRIEAAGYDVVFHVHDEAI
IEGSGLIIEEVNDLMAQAPEWAEGLPLNSEGYVTKYYMKD
>M5005_Spy1268 methyltransferase
MRVVSGEFGGRPLKTLDGKITRPTSDKVRGAIFNMIGPYFNGGRVLDLFA
GSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEA
ERAIDCLTGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDK
TVLLPKEIATLGIWKEKIYGISKVTVYVN
>M5005_Spy1204 recT protein
MANQLSTYTHKQFFNAPTIQKAFDDVWKGAGTQFAVSILSVLQGSQSLKS
ASNESIYAAAMKAAVLNLPIEPSLGRAYLVPYKGQAQFQLGYKGLIELAQ
RSGQYKNINAGIVYKSQLISYNPLFEELILDFSKPQDEIVGYFAAFKLLN
GFEKVSFWTVEKVTAHGKKFSKSFASGPWKTDFDAMAQKTILKDILSKYG
PLSVEMQKAIEEDNQDSTISTPKDITPQEANSLDDLIGHQNENKDAPNNL
KDVTEDLHDEEEKTLADENKTALEDTSYPADEIPDFDQETGEIKASEGNL
FDNLGDLMP
>M5005_Spy1112 DNA polymerase III subunit gamma/tau
MYQALYRKYRSQTFDEMVGQSVISTTLKQAVESGKISHAYLFSGPRGTGK
TSAAKIFAKAMNCPNQVDGEPCNQCDICRDITNGSLEDVIEIDAASNNGV
DEIRDIRDKSTYAPSRATYKVYIIDEVHMLSTGAFNALLKTLEEPTENVV
FILATTELHKIPATILSRVQRFEFKAIKQKAIREHLAWVLDKEGIAYEVD
ALNLIARRAEGGMRDALSILDQALSLSPDNQVAIAIAEEITGSISILALG
DYVRYVSQEQATQALAALETIYDSGKSMSRFATDLLTYLRDLLVVKAGGD
NQRQSAVFDTNLSLSIDRIFQMITVVTSHLPEIKKGTHPRIYAEMMTIQL
AQKEQILSQVNLSGELISEIETLKNELAQLKQQLSQLQSRPDSLARSDKT
KPKTTSYRVDRVTILKIMEETVRNSQQSRQYLDALKNAWNEILDNISAQD
RALLMGSEPVLANSENAILAFEAAFNAEQVMSRNNLNDMFGNIMSKAAGF
SPNILAVPRTDFQHIRKEFAQQMKSQKDSVQEEQEVALDIPEGFDFLLDK
INTIDD
>M5005_Spy0770 hypothetical cytosolic protein
MAGWRTVVVNTHSKLSYKNNHLIFKDAYKTELIHLSEIDILLLETTDIVL
STMLVKRLVDENVLVIFCDDKRLPTAMLMPFYGRHDSSLQLGKQMSWSET
VKSQVWTTIIAQKILNQSCYLGACSYFEKSQSIMDLYHGLENFDPSNREG
HAARIYFNTLFGNDFSRDLEHPINAGLDYGYTLLLSMFAREVVVSGCMTQ
FGLKHANQFNQFNFASDIMEPFRPLVDKIVYENRNQPFPKIKRELFTLFS
DTFSYNGKEMYLTNIISDYTKKVVKALNNEGKGVPEFRI
>M5005_Spy1327 comFA, COMF operon protein 1
MICQRCHYQLDEEARLPSGAYYCRFCLVFGRNQSDKLLYAIPPMHFPKGN
YLVWGGQLTAYQEMISQQLLINMQNQKTTLVHAVTGAGKTEMIYAAIEAV
INTGGWVCIASPRVDVCVEVATRLSQAFSCSICLMHAESLPYQRAPIIVA
TTHQLLKFHKAFDLLIIDEVDAFPFVNNIQLHYAASQALKEGGAKILLTA
TSTRTLERKVNKGEVVKLTLARRFHNRPLVIPKFIRSFNLFKMIHRQKLP
LKILKYLKKQRKTGYPLLIFLPTIIMAESVTAILKELLPAEQIACVSSQS
QNRKEDITAFRQGKKTILITTSILERGVTFPQIDVFVLGSHHRVYSSQSL
VQIAGRVGRSIDRPDGTLYFFHEGISKAMLLARKEIKEMNYKGYSHDLST
MSTN
>M5005_Spy1154 deaD, ATP-dependent RNA helicase
MKFTEFNLSQDIQSAVVTAGFEKASPIQEMTIPLALEGKDVIGQAQTGTG
KTAAFGLPTLNKIRTNENIIQALVIAPTRELAVQSQEELFRFGREKGVKV
RSVYGGSSIEKQIKALKSGAHIVVGTPGRLLDLIKRKALILDHVETLILD
EADEMLNMGFLEDIEAIISRVPADRQTLLFSATMPAPIKQIGVKFMKDPE
HVQIKNKELTNVNVDQYYVRVKEQEKFDTMTRLMDVNQPELSIVFGRTKR
RVDEITRGLKLRGFRAEGIHGDLDQNKRLRVIRDFKNDQIDILVATDVAA
RGLDISGVTHVYNYDITQDPESYVHRIGRTGRAGKSGESITFVSPNEMGY
LSMIENLTKKQMKPLRPATAEEAFQAKKKVALKKIERDFADETIRSNFDK
FKGDAVQLAAEFTPEELALYILSLTVQDPDSLPEVEIAREKPLPFKYVGG
GHGNKNGKGGRGRDNRNRGDRRGGYRGDRNRDERDGDRRRQKRDKRDGHD
GSGNRDFKRKSKRNSKDFFNKEKKSSAKNTGFVIRHKGE
>M5005_Spy1117 deaD2, ATP-dependent RNA helicase
MITKFPPQWQEKLDQVAFTHLTPIQEQAFQPIVDGKNFLGISPTGTGKTL
AYVFPSLLALTPKKSQQLLILAPNTELAGQIFEVTKDWAQPLGLTAQLFI
SGTSQKRQIERLKKGPEILIGTPGRIFELIKLKKIKMMSVNTIVLDEYDE
LLGDSQYDFVQKISHYVPRDHQMVYMSATNKVDQTSLAPNTFCIDLSEQT
NDAIQHFYLMVDKRERTDLLRKFTNIPHFRALVFFNSLSDLGATEERLQY
NGAAAVSLASDINVKFRKTILEKFKSHQLSLLLATDLVARGIDIDNLDYV
IHFDVARDKENYTHRAGRTGRMGKSGIVITFVSHPEDLKKLKKFAKVSEI
SLKNQQLHFIN
>M5005_Spy0536 dinG, ATP-dependent helicase
MTQKKLRKYAVVDLEATGAGPNASIIQVGIVIIQGNKIIDSYETDVNPHE
SLDEHIVHLTGITDKQLAKAPDFGQVAHHIYQLIEDCIFVAHNVKFDANL
LAEALFLEGYELTIPRVDTVELAQLFFPRFEKYNLSHLSRQLNIDLAEAH
TAIADARATAILFLRLLQKIESLPIECLESLLVYSDSLLFETAMVIQEGL
AKAKPYDPNKYIKIRQILLPKGSKALKPYQISKSFPINMALLGLEERPKQ
TQFAQLIDEDYHQGVASFIEAQTGIGKTYGYLLPLLAKEDQNQIIVSVPT
KLLQDQLMAGEVAAIQEQFHIACHSLKGPANYLKLDSFADSLDQNDQNRL
VNRYKMQLLVWLLETKTGDLDEIKQKQRFAAYFEQLKHDGDIKQSSEFYD
YDFWRVSYEKAKTARLLITNHAYFLHRVQDDKDFARNKVLVFDEAQKLML
QLDQLSRHQLNLTVFLQTIQAKLSNPLPLLEKRLLESLSFELGQVSSDYY
QNKEHQLAHDWSRIAGYAKELTGADYQELQAFFATSDGDYWLSSEKQEEK
RVTYLNSASKAFIHFQQLLPETVKTYFVSATLTISSEVTLADLLGFEEYL
YHVIEKDKKQDQLVLVDQEAPIVTEVSDQIYVEAIAKRIESLKQEGYPIL
VLFNSKKHLLLVSDYLDQWQVPHLAQEKNGTAYNIKKRFDQGEQTILLGL
GSFWEGVDFIQADRMITLIARLPFDNPEDFFVKKMSHYLLEKGKNPFRDY
FLPMTILRLKQAIGRTMRRQDQKSVVIILDRRLLTKSYGQVILEGLGQEF
LISQQNFHDCLVETDCFLI
>M5005_Spy1568 dinP, DNA polymerase IV
MLIFPLINDTSRKIIHIDMDAFFAAVEERDNPALKGKPVVIGKDPRETGG
RGVVSTCNYEARKYGIHSAMSSKEAYERCPKAIFISGNYEKYRTVGDQIR
RIFKRYTDVVEPMSIDEAYLDVTDNKLGIKSAVKIAKLIQHDIWKEVGLT
CSAGVSYNKFLAKLASDFEKPHGLTLVLKEDALCFLAKLPIEKFHGVGKK
SVKKLHDMGIYTGQDLLAVPEMTLIDHFGRFGFDLYRKARGISNSPVKSD
RIRKSIGSERTYAKLLYQETDIKAEISKNVKRVAALLQDHKKLGKTIVLK
VRYADFTTLTKRVTLPELTRNAAQIEQVAGDIFDSLSENPAGIRLLGVTM
TNLEDKVADISLDL
>M5005_Spy0001 dnaA, chromosomal replication initiator protein
MTENEQIFWNRVLELAQSQLKQATYEFFVHDARLLKVDKHIATIYLDQMK
ELFWEKNLKDVILTAGFEVYNAQISVDYVFEEDLMIEQNQTKINQKPKQQ
ALNSLPTVTSDLNSKYSFENFIQGDENRWAVAASIAVANTPGTTYNPLFI
WGGPGLGKTHLLNAIGNSVLLENPNARIKYITAENFINEFVIHIRLDTMD
ELKEKFRNLDLLLIDDIQSLAKKTLSGTQEEFFNTFNALHNNNKQIVLTS
DRTPDHLNDLEDRLVTRFKWGLTVNITPPDFETRVAILTNKIQEYNFIFP
QDTIEYLAGQFDSNVRDLEGALKDISLVANFKQIDTITVDIAAEAIRARK
QDGPKMTVIPIEEIQAQVGKFYGVTVKEIKATKRTQNIVLARQVAMFLAR
EMTDNSLPKIGKEFGGRDHSTVLHAYNKIKNMISQDESLRIEIETIKNKI
K
>M5005_Spy0285 dnaB, replicative DNA helicase
MMKPIDTFTYLKRNKVTLDSVTLIQLYFPIIGSDAVSIYQYFIHFFDDGL
QRHKFSDILNHLQFGMKRFEDALAILTAMELVSVYQLSDTYLITLHQPLS
RDLFFQHPAYSRLLEQKIGEVAVSELQVTVPSQARNISKRFSDIFGVQGD
LTNVPQKPQKNFDLSSFQQLMVRDGLQFEDNQKDIISLYSIAEQYDMTWF
DTYQIAKATAVNGKIRPERLLAKKNQSMTKPSKENFSQAEQIILREAKQD
SALVFLEKIKKARRATITKDERILLQTLAKMNFLDDVINVMVLYTFNKTK
SANLQKSYVLKMANDFAYQKVSTAEEAIVVLRAFTDRQSRRQSKVKTSQS
NVPKWSNPDYQETTSQEEQAKLDQFKQAALKRLENLGKGGD
>M5005_Spy0729 dnaD, DNA replication protein
MSFLEHYKSGNLVIPSALLFHYKDLFKSSDDFLVWQFFYLQNTTKRDDLA
PSQIAHALGKSVADINKIISSLTNQGLLDMRTIELTGEIEIIFDASPVLA
KLDQLFVSQTATEIDKQETPNHFKRLVDEFERELGRFLSPFELEDLEKTL
RDDKTDPDLIREALKEAVFNGKTNWKYIQAILRNWRKEGIVNLRQVEERR
RVREGEDLSQVTISEDFLSAMNLWSDS
>M5005_Spy0990 dnaE, DNA polymerase III alpha subunit
MFAQLDTKTVYSFMDSLIDLNHYFERAKQFGYHTIGIMDKDNLYGAYHFI
KGCQKNGLQPVLGLEIEILYQERQVLLNLIAQNTQGYHQLLKISTAKMSG
KLHMDYFCQHLEGIAVIIPSKGWSDTLVVPFDYYIGVDQYTDLSHMDSKR
QLIPLRTVRYFAQDDMETLHMLHAIRDNLSLAETPVVESDQELADCQQLT
AFYQTHCPQALQNLEDLVSGIYYDFDTNLKLPHFNRDKSAKQELQDLTEA
GLKEKGLWKEPYQSRLLHELVIISDMGFDDYFLIVWDLLRFGRSKGYYMG
MGRGSAAGSLVAYALNITGIDPVQHDLLFERFLNKERYSMPDIDIDLPDI
YRSEFLRYVRNRYGSDHSAQIVTFSTFGPKQAIRDVFKRFGVPEYELTNL
TKKIGFKDSLATVYEKSISFRQVINSRTEFQKAFAIAKRIEGNPRQTSIH
AAGIVMSDDALTNHIPLKSGDDMMITQYDAHAVEANGLLKMDFLGLRNLT
FVQKMQEKVAKDYGCQIDITAIDLEDPQTLALFAKGDTKGIFQFEQNGAI
NLLKRIKPQRFEEIVATTSLNRPGASDYTTNFIKRREGQEKIDLIDPVIA
PILEPTYGIMLYQEQVMQIAQVYAGFTLGKADLLRRAMSKKNLQEMQKME
EDFIASAKHLGRAEETARGLFKRMEKFAGYGFNRSHAFAYSALAFQLAYF
KAHYPAVFYDIMMNYSSSDYITDALESDFQVAQVTINSIPYTDKIEASKI
YMGLKNIKGLPRDFAYWIIEQRPFNSVEDFLTRTPEKYQKKVFLEPLIKI
GLFDCFEPNRKKILDNLDGLLVFVNELGSLFSDSSFSWVDTKDYSVTEKY
SLEQEIVGVGMSKHPLIDIAEKSTQTFTPISQLVKESEAVVLIQIDSIRI
IRTKTSGQQMAFLSVNDTKKKLDVTLFPQEYAIYKDQLKEGEFYYLKGRI
KERDHRLQMVCQQVQMAISQKYWLLVENHQFDSQISEILGAFPGTTPVVI
HYQKNKETIALTKIQVHVTENLKEKLRPFVLKTVFR
>M5005_Spy0599 dnaG, DNA primase
MGFLWGGDDLAIDKEMISQVKNSVNIVDVIGEVVKLSRSGRHYLGLCPFH
KEKTPSFNVVEDRQFFHCFGCGKSGDVFKFIEEYRQVPFLESVQIIADKT
GMSLNIPPSQAVLASQHKHPNHALMTLHEDAAKFYHAVLMTTTIGQEARK
YLYQRGLDDQLIEHFNIGLAPDESDYLYQALSKKYEEGQLVASGLFHLSD
QSNTIYDAFRNRIMFPLSDDRGHIIAFSGRIWTAADMEKRQAKYKNSRGT
VLFNKSYELYHLDKARPVIAKTHEVFLMEGFMDVIAAYRSGYENAVASMG
TALTQEHVNHLKQVTKKVVLIYDGDDAGQHAIAKSLELLKDFVVEIVRIP
NKMDPDEFVQRHSPEAFADLLKQSRISSVEFFIDYLKPTNVDNLQSQIVY
VEKMAPLIAQSPSITAQHSYINKISDLLPNFDYFQVEQSVNALRIQDRQK
HQGQIAQAVSNLVTLPMPKSLTAIAKTESHLMHRLLHHDYLLNEFRHRDD
FYFDTSTLELLYQRLKQQGHITSYDLSEMSEEVNRAYYNVLEENLPKEVA
LGEIDDILSKRAKLLAERDLHKQGKKVRESSNKGDHQAALEVLEHFIAQK
RKME
>M5005_Spy0286 dnaI, primosomal protein
MEKIGETMAKLGQNTRVNSDQLIQTILADPEVASFISQHHLSQEQINLSL
SKFNQFLVERQKYQLKDPSYIAKGYQPILAMNEGYADVSYLETKELVEAQ
KQAAISERIQLVSLPKSYRHIHLSDIDVNNASRMEAFSAILDFVEQYPSA
EQKGLYLYGDMGIGKSYLLAAMAHELSEKKGVSTTLLHFPSFAIDVKNAI
SNGSVKEEIDAVKNVPVLILDDIGAEQATSWVRDEVLQVILQYRMLEELP
TFFTSNYSFADLERKWATIKGSDETWQAKRVMERVRYLAREFHLEGANRR
>M5005_Spy0002 dnaN, DNA polymerase III beta chain
MIQFSINRTLFIHALNTTKRAISTKNAIPILSSIKIEVTSTGVTLTGSNG
QISIENTIPVSNENAGLLITSPGAILLEASFFINIISSLPDISINVKEIE
QHQVVLTSGKSEITLKGKDVDQYPRLQEVSTENPLILKTKLLKSIIAETA
FAASLQESRPILTGVHIVLSNHKDFKAVATDSHRMSQRLITLDNTSADFD
VVIPSKSLREFSAVFTDDIETVEVFFSPSQILFRSEHISFYTRLLEGNYP
DTDRLLMTEFETEVVFNTQSLRHAMERAFLISNATQNGTVKLEITQNHIS
AHVNSPEVGKVNEDLDIVSQSGSDLTISFNPTYLIESLKAIKSETVKIHF
LSPVRPFTLTPGDEEESFIQLITPVRTN
>M5005_Spy1582 dnaQ, DNA polymerase III, epsilon chain
MKHLDTYIAFDLEFNTVNDVSHIIQVSAVKYDHHKEVDSFDTYVYTDVPL
QSFINGLTGITSDKIAAEPKVEEVMAAFKNFVGELPLIGYNAQKSDLPIL
AENGLDLRDQYQIDLFDEAYDRRSADLNGIANLRLQTVATFLGIKGRGHN
SLEDARMTAVIYKSFLETDTNKAYLSQQEEVTTDNPFAALGDFFD
>M5005_Spy0331 dnaX, DNA polymerase III, delta' subunit
MDLAQKAPNVYQAFQTILKKDRLNHAYLFSGDFANEEMALFLAKVIFCEQ
KKDQTPCGHCRSCQLIEQGDFADVTVLEPTGQVIKTDVVKEMMANFSQTG
YENKRQVFIIKDCDKMHINAANSLLKYIEEPQGEAYIFLLTNDDNKVLPT
IKSRTQVFQFPKNEAYLYQLAQEKELLNHQAKLVAKLATNTSHLERLLQT
SKLLELITQAERFVSIWLKDQLQAYLALNRLVQLATEKEEQDLVLTLLTL
LLARERAQTPLTQLEAVYQARLMWQSNVNFQNTLEYMVMSE
>M5005_Spy0339 exoA, exodeoxyribonuclease III
MGARCPKSLIVSFFVTITTRLSVRKRNQMKLISWNIDSLNAALTGESPRA
LLSRAVLDTLVAQDADIIAIQETKLSAKGPTKKHIETLLSYFPNYLHVWR
SSVEPARKGYAGTMFLYKNTLNPVITFPEIGAPTTMDAEGRIITLEFEDF
FVTQVYTPNAGDGLRRLDDRQIWDHKYADYLTELDAQKPVLATGDYNVAH
KEIDLANPNSNRRSPGFTDEERQGFTNLLARGFTDTFRHVHGDIPHVYTW
WAQRSKTSKINNTGWRIDYWLASNRLVDKVKRSEMISSGERQDHTPILLD
IDL
>M5005_Spy0408 fpg, formamidopyrimidine-DNA glycosylase
MPELPEVETVRRGLETLVLGQEIVAVTLKVPKMVKTDLETFALTLPGQII
QSVGRRGKYLLIDLGQLVLVSHLRMEGKYLLFPDEVPDNKHFHVFFELKN
GSTLVYQDVRKFGTFDLIAKSQLSAFFAKRKLGPEPKKETFKLKTFEAAL
LSSQKPIKPHLLDQTLVAGLGNIYVDEVLWAAKVHPETASSRLNKAEIKR
LHDETIRILALGIEKGGSTVRTYRNALGADGTMQDYLQVYGQTGKPCPRC
GQAIVKLKVGGRGTHICPKCQKKRL
>M5005_Spy0874 gyrA, DNA gyrase subunit A
MQDRNLIDVNLTSEMKTSFIDYAMSVIVARALPDVRDGLKPVHRRILYGM
NELGVTPDKPHKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRHML
VDGHGNFGSMDGDGAAAQRYTEARMSKIALELLRDINKNTVNFQDNYDGS
EREPVVLPARFPNLLVNGATGIAVGMATNIPPHNLAESIDAVKMVMEHPD
CTTRELMEVIPGPDFPTGALVMGRSGIHRAYDTGKGSIVLRSRTEIETTQ
TGRERIVVTEFPYGVNKTKVHEHIVRLAQEKRLEGITAVRDESSREGVRF
VIEIRREASATVILNNLFKLTSLQTNFSFNMLAIENGVPKILSLRQIIDN
YISHQKEVIIRRTRFDKDKAEARAHILEGLLIALDHLDEVIAIIRNSETD
VIAQTELMSRFDLSERQSQAILDMRLRRLTGLERDKIQSEYDDLLALIAD
LSDILAKPERIITIIKEEMDEIKRKYANPRRTELMVGEVLSLEDEDLIEE
EDVLITLSNKGYIKRLAQDEFRAQKRGGRGVQGTGVNNDDFVRELISTST
HDTLLFFTNFGRVYRLKAYEIPEYGRTAKGLPIVNLLKLEDGETIQTIIN
ARKEETAGKSFFFTTKQGIVKRTEVSEFNNIRQNGLRALKLKEGDQLINV
LLTSGQDDIIIGTHSGYSVRFNEASIRNMGRSATGVRGVKLREDDRVVGA
SRIQDNQEVLVITENGFGKRTSATDYPTKGRGGKGIKTANITPKNGQLAG
LVTVDGTEDIMVITNKGVIIRTNVANISQTGRATLGVKIMKLDADAKIVT
FTLVQPEDSSIAEINTDRENSISKNKDN
>M5005_Spy0553 gyrB, DNA gyrase subunit B
MIEENKHFEKKMQEYDASQIQVLEGLEAVRMRPGMYIGSTAKEGLHHLVW
EIVDNSIDEALAGFASHIKVFIEADNSITVVDDGRGIPVDIQAKTGRPAV
ETVFTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSTQLDVRVYKNGQIH
YQEFKRGAVVADLEVIGTTDVTGTTVHFTPDPEIFTETTQFDYSVLAKRI
QELAFLNRGLKISITDKRSGMEQEEHFLYEGGIGSYVEFLNDKKDVIFET
PIYTDGELEGIAVEVAMQYTTSYQETVMSFANNIHTHEGGTHEQGFRAAL
TRVINDYAKKNKILKENEDNLTGEDVREGLTAVISVKHPNPQFEGQTKTK
LGNSEVVKITNRLFSEAFQRFLLENPQVARKIVEKGILASKARIAAKRAR
EVTRKKSGLEISNLPGKLADCSSNDANQNELFIVEGDSAGGSAKSGRNRE
FQAILPIRGKILNVEKATMDKILANEEIRSLFTAMGTGFGADFDVSKARY
QKLVIMTDADVDGAHIRTLLLTLIYRFMRPVLEAGYVYIAQPPIYGVKVG
SEIKEYIQPGIDQEDQLKTALEKYSIGRSKPTVQRYKGLGEMDDHQLWET
TMDPENRLMARVTVDDAAEADKVFDMLMGDRVEPRRDFIEENAVYSTLDI
>M5005_Spy1835 holB, replicative DNA helicase
MKLPEVAELRVQPQDLLAEQSVLGSIFISPDKLIAVREFISPDDFYKYAH
KIIFRAMITLSDRNDAIDATTIRTILDDQDDLQSIGGLSYIVELVNSVPT
SANAEYYAKIVAEKAMLRDIIARLTESVNLAYDEILKPEEVIAGVERALI
ELNEHSNRSGFRKISDVLKVNYEALEARSKQTSNVTGLPTGFRDLDKITT
GLHPDQLVILAARPAVGKTAFVLNIAQNVGTKQKKTVAIFSLEMGAESLV
DRMLAAEGMVDSHSLRTGQLTDQDWNNVTIAQGALAEAPIYIDDTPGIKI
TEIRARSRKLSQEVDGGLGLIVIDYLQLITGTKPENRQQEVSDISRQLKI
LAKELKVPVIALSQLSRGVEQRQDKRPVLSDIRESGSIEQDADIVAFLYR
DDYYRKECDDAEEAVEDNTIEVILEKNRAGARGTVKLMFQKEYNKFSSIA
QFEER
>M5005_Spy1052 int.1, phi5005.1 integrase
MKIKSYKKENGETAYKFLLYAGYVNGKRKYIRREGFKTKQAARETLISLQ
AELDKPKSSMTFGALTDQWLKEYEKTVQCSTYLKTERNINKHILPKLDKV
KIGDINPLLIQRLTEEWCNDLKYGGKILGLVRNILNLAVRYGYINNNPAL
PITPPKIKRKRKMNNNFYTLDQLKQFLELVEKTDNIEKIALFRLLAFTGI
RKGELLALTWDDLNGNTLSINKAVTRTQVGLEIDVTKTKSSDRLISLDDE
TLEILLELHETFPTSTLMFQSESGGIMTPSLPRKWLLQIIKGTDLPQITI
HGFRHTHASLLFESGLSLKQVQHRLGHGDLQTTMNVYTHITQSAIDDIGT
KFNQFVTNKQLD
>M5005_Spy1222 int.2, phi5005.2 integrase
MWIEETDNGKFKFRENYKDPYTGTWKPVSVTMEKDNSRAYKAARKILEQK
ITEKIAQLKASELLFTELLDEWWAFYKKELKRSSVASLRGNIEEIRETFG
IGVKVVNIDPKYVQNYLDNLDCSRNKKERNKSMLNLAFDYAVGLDIIQDN
PARRAKLPRVKKTLEDWKKAEEKYLEEDEIKPLLKELYRRPSTYRLGLLA
EFISLNGCRIGEAVSIEPCNYESKSRILQLHGTFDHTEGYRNGEKTAPKT
LASYRETIMTSRELEILQELEFMNELEKNTNHRYRDMGYLFTTKNGVPIQ
TNSFNLALKKANERLEDPITKKLTSHIFRHTLISRLAENNVPLKSIMERV
GHADAKTTAQIYTHVTKKMKSSVADIMENY
>M5005_Spy1467 int.3, phi5005.3 integrase
MAFYRKLGSGWEYRITYRDSQGKKREKSKRGFKTKTLAKVAAQQAEIDLN
TLTADLLDITVLDYNRRWADIYKRPHITAKTWQTYTKNFKHIEHYFGTRK
LKSITHTFYQQVLNDFGAKVAQQTLDKFHYQIKGACKMAIRDGIIRDNFA
DGAIVRSQKPAKEESEKFMEESEYLAFIKVAKSKVKYPSYLTTYIIAVTG
LRFAEVQGLTWKDIDFENGYIDINKTFDYSISQNFGPTKNEQSIRKVPID
KNSLEILRNFKSDYYQDNKLGRVCFGASNNATNKVIKRVTGRNLTNHSLR
HTYASYLIAQGVDLISVSKLLGHENLNITLKVYAHQIESLKEKNDHQVKN
IFQNLKFDG
>M5005_Spy0573 lig, NAD-dependent DNA ligase
MKKRIKELTDLLNRYRYDYYTKDAPSVSDSDYDKLYRELVTLEQSYPEYV
LQDSPTQQVGGTILKGFEKYRHQYPLFSLQDAFSREELDAFDKRVKAEFP
NATYLAELKIDGLSISLSYENGFLQVGATRGDGNIGENITENIKKIKDIP
YQLSEPLTITVRGEAYMSRQSFKAINEARQENGETEFANPRNAAAGTLRQ
LDTSVVAKRQLATFLYQEASPTARNQQNEVLAELADLGFSVNPYYQLTSS
MDEIWDFIKTIEAKRDQLAYDIDGVVIKVNSLAMQEELGFTVKAPRWAIA
YKFPAEEKEAEILSVDWTVGRTGVVTPTANLTPVQLAGTTVSRATLHNVD
YIAEKDIRIGDTVIVYKAGDIIPAVLNVVMSKRNQQEVMLIPKLCPSCGS
ELVHFEDEVALRCINPLCPSLIQRSLEHFASRDAMNITGLGPAIVEKLFL
AGFVHDVADIYQLTKEDFMQLDGIKEKSADKLLAAIEASKSNSAEKLLFG
LGIRHIGSKVSRLILEVYGDISALLTAKEEEIARIDGLGSTIAQSLTQYF
EQKTAAILVDELKTAGVNMHYSGQKVNSDAALFGLTVVLTGKLNQLNRNE
AKDKLEALGAKVTGSVSKKTDLVIAGSDAGSKLEKAKSLGIRIEDEDWLR
QL
>M5005_Spy1804 mutL, DNA mismatch repair protein
MTNIIELPEVLANQIAAGEVVERPASVVKELVENAIDAKSSQITVEIEES
GLKMIQVTDNGEGMSHEDLPLSLRRHATSKIKSQSDLFRIRTLGFRGEAL
PSVASISKITIKTATKEVTHGSLLIATGGEIETLEAISTPTGTKIKVENL
FYNTPARLKYMKSLQAELAHIVDVVNRLSLAHPEVAFTLISDGRQLTQTS
GTGDLRQAIAGIYGLNTTKKMLAISNADLDFEVSGYVSLPELTRANRNYM
TILVNGRYIKNFLLNRAILDGYGSKLMVGRFPIVVIDIQIDPYLADVNVH
PTKQEVRISKERELMALISTAISESLKEQDLIPDALENLAKSSTRHFSKP
EQTQLPLQSRGLYYDPQKNDFFVKESAVSEKIPETDFYSGAVDNSVKVEK
VELLPHSEEVIGPSSVKHASRPQNTFTETDHPNLDLKNRQKLSQMLTRLE
NEGQSVFPELDYFGQMHGTYLFAQGKDGLFIIDQHAAQERVKYEYYRDKI
GEVDSSLQQLLVPYLFEFSGSDFINLQEKMALLNEVGIFLEVYGHNTFIL
REHPIWMKEEEIASGVYEMCDMLLLTNEVSIKTYRAELAIMMSCKRSIKA
NHSLDDYSARNLLLQLAQCQNPYNCPHGRPVLINFSKADMEKMFRRIQEN
HTSLRELGKY
>M5005_Spy1805 mutS, DNA mismatch repair protein
MAKTNISPGMQQYLDIKKDYPDAFLLFRMGDFYELFYEDAVKAAQLLEIG
LTSRNKNAENPIPMAGVPHHSAQQYIDVLIELGYKVAVAEQMEDPKQAVG
VVKREVVQVITPGTVVDSAKPDSANNFLVAVDFDGCRYGLAYMDVSTGEF
CVTDLADFTSVRSEIQNLKAKEVLLGFDLSEEEQTILVKQMNLLLSYEET
VYEDKSLIDGQLTTVELTAAGKLLQYVHKTQMRELSHLQALVHYEIKDYL
QMSYATKSSLDLVENARTNKKHGSLYWLLDETKTAMGMRLLRSWIDRPLV
SKEAILERQEIIQVFLNAFIERTDLSNSLKGVYDIERLSSRVSFGKANPK
DLLQLGHTLAQVPYIKAILESFDSPCVDKLVNDIDSLPELEYLIRTAIDP
DAPATISEGSIIRNGFDERLDHYRKVMREGTGWIADIEAKERQASGINNL
KIDYNKKDGYYFHVTNSNLSLVPEHFFRKATLKNSERYGTAELAKIEGQM
LEAREESSSLEYDIFMCIRAQVETYINRLQKLAKILATVDVLQSLAVVAE
TNHYIRPQFNDNHVITIQEGRHAVVEKVMGVQEYIPNSISFDQQTSIQLI
TGPNMSGKSTYMRQLALTVIMAQMGSFVAADHVDLPLFDAIFTRIGAADD
LISGQSTFMVEMMEANQAIKRASDNSLILFDELGRGTATYDGMALAQAII
EYIHDRVGAKTIFATHYHELTDLSTNLTSLVNVHVATLEKDGDVTFLHKI
AEGPADKSYGIHVAKIAGLPKSLLKRADEVLTRLETQSRSTEIISVPSQV
ESSSAVRQGQLSLFGDEEKAHEIRQALEVIDVMNMTPLQAMTTLYELKKL
L
>M5005_Spy1561 mutS2, DNA mismatch repair protein
MNNKILEQLEFNKVKELLLPYLKTEQSQEELLELEPMTEAPKIEKSFNEI
SDMEQIFVEHHSFGIVSLSSISESLKRLELSTDLNIQELLAIKKVLQSSS
DMIHFYSDLDNVSFQSLDRLFENLEQFPNLQGSFQAINDGGFLEHFASPE
LERIRRQLTNSERRVRQILQDMLKEKAELLSENLIASRSGRSVLPVKNTY
RNRISGVVHDISSSGSTVYIEPRAVVTLNEEITQLRADERHEEGRILHAF
SDLLRPHVATIRNNAWILGHLDFVRAKYLFMSDNKATIPKISNDSTLALI
NVRHPLLSNPVANDLHFDHDLTAIVITGPNTGGKTIMLKTLGLAQLMGQS
GLPVLADKGSKIAVFNNIFADIGDEQSIEQSLSTFSSHMTHIVSILNEAD
HNSLVLFDELGAGTDPQEGASLAMAILEHLRLSHIKTMATTHYPELKAYG
IETNFVENASMEFDAETLSPTYRFMQGVPGRSNAFEIASRLGLAPFIVKQ
AKQMTDSDSDVNRIIEQLEAQTLETRRRLDHIKEVEQENLKFNRAVKKLY
NEFSHERDKELEKIYQEAQEIVDMALNESDTILKKLNDKSQLKPHEIIDA
KAQIKKLAPQVDLSKNKVLNKAKKIKAARAPRIGDDIIVTSYGQRGTLTS
QLKDGRWEAQVGIIKMTLTQDEFSLVRVQEEQKVKNKQINVVKKADGSGP
RARLDLRGKRYEEAMQELDHFIDQALLNNMGQVDIIHGIGTGVIREGVTK
YLRRNKHVKHFAYAPQNAGGSGATIVTLG
>M5005_Spy1241 mutT, mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase)
MMIPTFGHKNAHKDYVTRYGVYAIIPNHEQTKIILVQAPNGSWFLPGGEI
EAGEGQLQALERELIEELGFSATIGSYYGQADEYFYSRHRDTHFYHPAYL
YEVTAFQAVSKPLEDFNNLGWFSPIEAIAKLKRESHQWGVKEWQKKHHST
N
>M5005_Spy1557 mutY, A/G-specific adenine DNA glycosylase
MLQQTQVNTVIPYYKRFLEWFPQIKDLADAPEEQLLKAWEGLGYYSRVRN
MQKAAQQVMVDFGGIFPHTYDDIASLKGIGPYTAGAIASISFNLPEPAVD
GNVMRVMARLFEVNYDIGDPKNRKIFQAIMEILIDPDRPGDFNQALMDLG
TDIESAKTPRPDESPIRFFNAAYLNGTYGKYPIKNPKKKPKPMRIQAFVI
RNQNGQYLLEKNTKGRLLGGFWSFPIIETSPLSQQLDLFDDNQSNPIIWQ
TQNETFEREYQLKPQWTDNHFPNIKHTFSHQKWTIELIEGVVKATDLPNA
PHLKWVAIEDFSLYPFATPQKKMLETYLKQKNA
>M5005_Spy0730 nth, endonuclease III
MRIGKARLAKVLTIIGQMFPEAKGELDWETPFQLLIAVILSAQTTDKAVN
KVTPGLWQSYPEIEDLAFAELSDVENALRTIGLYKNKAKNIIKTAQAIRD
DFKGQVPKTHKELESLPGVGRKTANVVLAEVYGVPAIAVDTHVARVSKRL
NISSPDADVKQIEADLMAKIPKKDWIITHHRLIFFGRYHCLAKKPKCEIC
PVQSYCKYYQDTYGKSKA
>M5005_Spy0712 parC, topoisomerase IV subunit A
MSNIQNMSLEDIMGERFGRYSKYIIQERALPDIRDGLKPVQRRILYSMNK
DGNTFEKGYRKSAKSVGNIMGNFHPHGDSSIYDAMVRMSQDWKNREILVE
MHGNNGSMDGDPPAAMRYTEARLSEIAGYLLQDIEKNTVSFAWNFDDTEK
EPTVLPAAFPNLLVNGSSGISAGYATDIPPHNLSEVIDAVVYMIDHPKAS
LEKLMEFLPGPDFPTGGIIQGADEIKKAYETGKGRVVVRSRTEIEELKGG
KQQIIVTEIPYEVNKAVLVKKIDDVRVNNKVPGIVEVRDESDRTGLRIAI
ELKKEADSQTILNYLLKYTDLQVNYNFNMVAIDHFTPRQVGLQKILSSYI
SHRKDIIIERSKFDKAKAEKRLHIVEGLIRVLSILDEIIALIRSSDNKAD
AKENLKVSYDFSEEQAEAIVTLQLYRLTNTDIVTLQNEENDLRDLITTLS
AIIGDEATMYNVMKRELREVKKKFANPRLSELQAESQIIEIDTASLIAEE
ETFVSVTRGGYLKRTSPRSFNASSLEEVGKRDDDELIFVKQAKTTEHLLL
FTTLGNVIYRPIHELTDLRWKDIGEHLSQTISNFATEEEILYADIVTSFD
QGLYVAVTQNGFIKRFDRKELSPWRTYKSKSTKYVKLKDDKDRVVTLSPV
IMEDLLLVTKNGYALRFSSQEVPIQGLKSAGVKGINLKNDDSLASAFAVT
SNSFFVLTQRGSLKRMAVDDIPQTSRANRGLLVLRELKTKPHRVFLAGGV
QSDTSAEQFDLFTDIPEEETNQQMLEVISKTGQTYEIALETLSLSERTSN
GSFISDTISDQEVLVARTR
>M5005_Spy0711 parE, topoisomerase IV subunit B
MTKKEITINNYNDDAIQVLEGLDAVRKRPGMYIGSTDATGLHHLIWEIVD
NAVDEALSGFGDDIKVVINKDGSVSVADSGRGMPTGQHAMGIPTVQVIFT
ILHAGGKFGQGGYKTSGGLHGVGSSVVNALSAWLEVEITRDGSVYRQRFE
NGGKPVTTLKKVGTAPKSKSGTVVTFMPDDKIFSTIDFKFNTISERLKES
AFLLKNVKMSLTDLRGDDPIIEEFHYENGVQDFVEYLNEDKETLTPVIYM
EGQDQDFQVEVALQYNDGFSDNILSFVNNVRTKDGGSHETGLKSAITKAM
NDYARKTNLLKEKDKNLEGSDYREGLSAVLSILVPEQHLQFEGQTKDKLG
SPLARPIVESIVSEKLTFFLLENGEVASHLVRKAIKARDAREAARKARDD
SRNGKKNKKDKGLLSGKLTPAQSKNAKKNELYLVEGDSAGGSAKQGRDRK
FQAILPLRGKVLNTEKAKMADILKNEEINTMVYTIGAGVGADFNLEDINY
DKIIIMTDADTDGAHIQTLLLTFFYRYMRPLVEAGHVYIALPPLYKMSKG
KGKTEKIAYAWTDGELEDLRREFGKGAILQRYKGLGEMNANQLWETTMDP
ETRTLIRVTIDDLARAERRVSVLMGDKAAPRRQWIEDNVKFTLEENTVF
>M5005_Spy0977 pcrA, DNA helicase II
MNPLLNGMNDRQAQAVQTTEGPLLIMAGAGSGKTRVLTHRIAYLIDEKFV
NPWNILAITFTNKAAREMKERALALNPATKDTLIATFHSMCVRILRREAD
HIGYNRNFTIVDPGEQRTLMKRILKQLNIDPKKWNERSILGTISNAKNDL
LDEKGYEAQAADMYSQIVARCYKAYQEELRRSEALDFDDLIMMTLRLFDA
NPDVLAYYQQRYQYIHVDEYQDTNHAQYQLIKLLASRFKNICVVGDADQS
IYGWRGADMQNILDFEKDYPDAKVVLLEENYRSTKKILQAANDVINNNRN
RRPKKLWTQNADGEQLVYYRANDERDEAVFVASTISNMSQELGKNFKDFA
VLYRTNAQSRTIEEALLKSNIPYTMVGGTKFYSRKEIRDLIAYLTIVANP
ADNISFERIVNEPKRGVGPGTLDKLRQFAYESDQSLLEAASNLLMSPLKG
KAAQAIMDLANILGQLRQDLDQMSITDLAEALLEKTGYLDSLRLQNTLES
QARIENIEEFLSVTKNFDESSASQEEDETGVDRLGRFLNDLALIADTDDS
QAEAAEVTLMTLHAAKGLEFPVVFLIGMEEGVFPLSRASEDPDELEEERR
LAYVGITRAEEVLFMTNANTRTLFGKSSYNRPTRFLKEISEELLSYKGLA
RPAQSSFGVRFSTETHTQFGQGMSLSEALQARKAQAQVRQSAQPMQAHTI
PSASTSSVLPFGSNSSVEEVTWQIGDIAHHKKWGDGTVLEVSGSGKTMEL
KIKFPEVGLKKLLASVAPIEKK
>M5005_Spy1236 phr, deoxyribodipyrimidine photolyase
MVSVMWFRRDLRIDDQKALAHAIASQSPTLCVFQFNKEQLNLLHSRNQSS
FITSVLAFRKLLKCEGIDLYLMYGDLMTCFEQLLTQLKDWTDVYFNYDES
GYGRLRDQKAAQFFKKNGIAVHTYQDHYLHGSQEIINQSGQPYKVFTPYY
RIWQNYPKETPIKVELSQGRWLNLETPDDVLRTVESFKDEKYQDVATFDE
ASKQLNRFIQDQLAAYHANRDFPAQLGTSRLSPFLRIGAIGIRTVYHAVR
QAPNSLGQATFLKELAWRDFYNMVYVAYPDQKTQPIQKAFSQIEWVNNPD
WFQLWKEGKTGYPIVDAAMLQLQKTGWMHNRLRMIVASFLTKDLLCDWRL
GEQYFQQQLIDYDAASNIGGWQWAASTGTDAVPYFRIFNPVTQGKRFDPK
GEFIKAYLPQLEHVPEKYLHEPWKMPKNLQESVSCIIGTDYPQPIVDHAK
QREQAIAKYEWAKEKAKIE
>M5005_Spy0159 polA, DNA polymerase I
MENKNKLLLIDGSSVAFRAFFALYNQIDRFKNHSGLHTNAIYGFHLMLDH
MMKRVRPTHVLVAFDAGKTTFRTEMYADYKAGRAKTPDEFREQFSYIREM
LTALGIAYYELEHYEADDIIGTLDKMAERTEVPFDVTIVSGDKDLIQLTD
ENTVVEISKKGVAEFEEFTPAYLMEKMGLTPNQFIDLKALMGDKSDNIPG
VTKIGEKTGLKLLHEFGSLEGIYEHIDGFKTSKMKENLINDRDQAFLSKT
LATINTASPITIGLDDIVYNGPDVASLSQFYDEMDFVQLKKGLASQMPQE
PVAVISYQEVTNVSADLFSAEDIFYFETLRDNYHREAIIGFAWGHGEQIY
ASTDLSLLATDSFKQVFQKPIATYDFKRSKVLLSHLGIELVAPSYDARLA
NYLLSTVEDNELSTIARIFTDISLEEDDTVYGKGAKRAVPDKDVLLEHLA
RKVKVLLDSKSQMLDKLTAHEQLDLYQNIELPLANVLAKMEIEGIKVNRA
TLQDMAEQNKVIIEALTQEIYDMAGQEFNINSPKQLGSILFEKMQLPLEM
TKKTKTGYSTAVDVLERLAPIAPIVAKILDYRQITKLQSTYVIGLQDYIL
ADGKIHTRYVQDLTQTGRLSSVDPNLQNIPIRLEQGRLIRKAFTPSHEDA
VLLSSDYSQIELRVLAHISGDEHLIAAFNEGADIHTSTAMRVFGIDKAAD
VTANDRRNAKAVNFGIVYGISDFGLSNNLGITRKQSKSYIDTYFERYPGI
KAYMENVVREAKDKGYVETLFKRRRELPDINSRNFNVRSFAERTAINSPI
QGSAADILKIAMINLDKALQAGGFRAKMLLQVHDEIVLEVPNDELTAIKK
LVKDTMEAAVDLAVPLCVDESTGQSWYEAK
>M5005_Spy1672 polC, DNA polymerase III alpha subunit
MSDLFAKLMDQIEMPLDMRRSSAFSSADIIEVKVHSVSRLWEFHFAFAAV
LPIATYRELHDRLIRTFEAADIKVTFDIQAAQVDYSDDLLQAYYQEAFEH
APCNSASFKSSFSKLKVTYEDDKLIIAAPGFVNNDHFRNNHLPNLVKQLE
AFGFGTLTIDMVSDQEMTEHLTKNFVSSRQALVKKAVQDNLEAQKSLEAM
MPPVEEATPAPKFDYKERAAKRQAGFEKATITPMIEIETEENRIVFEGMV
FDVERKTTRTGRHIINFKMTDYTSSFALQKWAKDDEELRKFDMIAKGAWL
RVQGNIETNPFTKSLTMNVQQVKEIVRHERKDLMPEGQKRVELHAHTNMS
TMDALPTVESLIDTAAKWGHKAIAITDHANVQSFPHGYHRARKAGIKAIF
GLEANIVEDKVPISYEPVDMDLHEATYVVFDVETTGLSAMNNDLIQIAAS
KMFKGNIVEQFDEFIDPGHPLSAFTTELTGITDKHLQGAKPLVTVLKAFQ
DFCKDSILVAHNASFDVGFMNANYERHDLPKITQPVIDTLEFARNLYPEY
KRHGLGPLTKRFQVSLDHHHMANYDAEATGRLLFIFLKDAREKHGIKNLL
QLNTDLVAEDSYKKARIKHATIYVQNQVGLKNMFKLVSLSNIKYFEGVPR
IPRTVLDAHREGLLLGTACSDGEVFDAVLTKGIDAAVDLARYYDFIEIMP
PAIYQPLVVRELIKDQAGIEQVIRDLIEVGKRAKKPVLATGNVHYLEPEE
EIYREIIVRSLGQGAMINRTIGRGEGAQPAPLPKAHFRTTNEMLDEFAFL
GKDLAYQVVVQNTQDFADRIEEVEVVKGDLYTPYIDKAEETVAELTYQKA
FEIYGNPLPDIIDLRIEKELTSILGNGFAVIYLASQMLVNRSNERGYLVG
SRGSVGSSFVATMIGITEVNPMPPHYVCPSCQHSEFITDGSVGSGYDLPN
KPCPKCGTPYQKDGQDIPFETFLGFDGDKVPDIDLNFSGDDQPSAHLDVR
DIFGDEYAFRAGTVGTVAEKTAYGFVKGYERDYGKFYRDAEVDRLAAGAA
GVKRTTGQHPGGIVVIPNYMDVYDFTPVQYPADDVTASWQTTHFNFHDID
ENVLKLDILGHDDPTMIRKLQDLSGIDPITIPADDPGVMALFSGTEVLGV
TPEQIGTPTGMLGIPEFGTNFVRGMVNETHPTTFAELLQLSGLSHGTDVW
LGNAQDLIKEGIATLKTVIGCRDDIMVYLMHAGLEPKMAFTIMERVRKGL
WLKISEEERNGYIDAMRENNVPDWYIESCGKIKYMFPKAHAAAYVLMALR
VAYFKVHHPIMYYCAYFSIRAKAFELKTMSGGLDAVKARMEDITIKRKNN
EATNVENDLFTTLEIVNEMLERGFKFGKLDLYKSDAIEFQIKGDTLIPPF
IALEGLGENVAKQIVKARQEGEFLSKMELRKRGGASSTLVEKMDEMGILG
NMPEDNQLSLFDDFF
>M5005_Spy1339 priA, primosomal protein N'
MEKVAHVIVDIPLMQTDKPFSYGIPKELVSLVQLGSRVHVPFGKGNRLLQ
GFIIGFGQEDSSSLKLIQTVLDPEPVLNQEQLTLADQLRKTVFSYKITLL
KAMIPNLLNSNYDKVLRPESGLKKSDRDFLFEGKPSVLYSTLDREKEKIA
LKGIQAGHITVSYLAKDKKNLKTEKYYHVDLDALAVHPISSRAKKRQLLK
DYLLTHTKEAKLATLYQAFSRDVVAYFVTNHLIRIDERPIDRSESYFDQI
KPSSFLTLNEQQASAVTEIVEQIGKPSKPFLIEGITGSGKTEVYLHIIEA
VLKQDKTAIVLVPEISLTPQMTSRFISRFGKQVAIMHSGLSDGEKFDEWR
KIKTGQAKVVVGARSAIFSPLERIGAIIIDEEHESTYKQESNPRYHAREV
ALLRAKHHQAVVVMGSATPSIESRARASKGVYHFIQLTQRANPLAKIPEV
TIVDFRDYIGQQAVSNFTPYLIDKIKERLVKKEQVVLMLNRRGYSSFVMC
RDCGYVDKCPNCDISLTLHMDTKTMNCHYCGFQKPIPITCPECHSNSIRY
YGTGTQKAFDELQGVIPEAKILRMDVDTTRKKRSHKTILDSFGRQEADIL
LGTQMIAKGLDFPNVTLVGVLNADTSLNLPDFRASEKTFQLLTQVAGRAG
RAHKPGEVLIQTYNPDHYAIQLAKKQDFEAFYRYEMSIRHQMAYPPYYFT
VGITLSHRLEASVVKKAYQVTELLKSHLSDNIKILGPTPKPIARTHNLYH
YQILLKYRFEDNLEETLNRILDWSQEADNRHLKLIIDCEPQQFL
>M5005_Spy0840 radC, DNA repair protein
MYSIKCDDNKAMPRERLMRLGAESLSNQELLAILLRTGNKEKHVLELSSY
LLSHLDSLADFKKMSLQELQHLAGIGKVKAIEIKAMIELVSRILATDKTL
TDSVLTSVQVAEKMMAALGDKKQEHLVVLYLDNQNRIIEEKTIFIGTVRR
SLAEPREILYYACKNMATSLIVIHNHPSGNIEPSSNDYCFTEKIKRSCED
LGIICLDHIIVSYKDYYSFREKSTLF
>M5005_Spy1799 recA, RecA
MAKKLKKNEEITKKFGDERRKALDDALKNIEKDFGKGAVMRLGERAEQKV
QVMSSGSLALDIALGAGGYPKGRIIEIYGPESSGKTTVALHAVAQAQKEG
GIAAFIDAEHALDPAYAAALGVNIDELLLSQPDSGEQGLEIAGKLIDSGA
VDLVVVDSVAALVPRAEIDGDIGDSHVGLQARMMSQAMRKLSASINKTKT
IAIFINQLREKVGVMFGNPETTPGGRALKFYASVRLDVRGTTQIKGTGDQ
KDSSIGKETKIKVVKNKVAPPFKVAEVEIMYGEGISRTGELVKIASDLDI
IQKAGAWFSYNGEKIGQGSENAKRYLADHPELFDEIDLKVRVKFGLLEES
EEESAMAVASEETDDLALDLDNGIEIED
>M5005_Spy1566 recD, exodeoxyribonuclease V alpha chain
MEYVFTGTVDRIIFENQANFFKILLLAIEDTDSDIDDFEIIITGTMADII
EGDDYTFWGELTQHPKYGQQLKLSRYQKIKPSSSGLVNYFSSDHFKGIGK
KTAEKIIALYGHNTIDHILEDPSKLETISGLSKANRQAFVAKLKLNYGTE
QLIAGLVELGLSNRFALQAFEKYKEEALDLVKENPYQLVEDLQGFGFKMA
DALAENLGIESDSPKRFRAALLHCLLEESINRGDTYVQARQLLDFAITLL
EDARQVECDPAAVAEQLSELIIEGKIKNSDTKLFDASLYFAEEGIANNIS
RLLDTPLSQSFSHDTIQTTIQAVQKDFAITYDQVQQEAITKALTSKVFLL
TGGPGTGKTTVIRGILQAYANLHQIDLDKKDLPILLAAPTGRAARRMNEL
TGLPSATIHRHLGLNGDNDYQAMEDYLDCDLLIVDEFSMVDTWLANQLLG
AINSTTQVIIVGDSDQLPSVGPGQVLSDLLKVNSLPQIALQKIFRQSQES
TIVNLADQMRRGILAADFRDKKADRSYFEAQAAFIPDMIQKIVLSAIKSG
IPAEEIQILAPMYKGQAGINHLNQLMQELLNPLQGQTEFLFNDTHFRKGD
KVLHLVNDAQLNVFNGDIGYITDLIPAKYTESKQDELILDFDGSEVTYPR
NEWLKLTLAYAMSIHKSQGSEFQVVILPITRQSGRLLQRNVIYTAITRSK
SKLILLGEYTAFEYAIKHEGDKRQTYLIERFQEQSDLASSQPNQELKSKE
QTSLFSNTATLEDDSQKSSSQSTNSNPTENSQSDNDDFRLTPENYSTIDS
MIGLTESDIALFFQKKS
>M5005_Spy1855 recF, DNA replication and repair protein
MWIKELELKHYRNYDHLLASFSSGLNVFIGNNAQGKTNFLEAIYFLSLTR
SHRTRADKELIHFDHSTVSLTGKIQRISGTVDLEINLSDKGRVTKINALK
QAKLSDYIGTMMVVLFAPEDLQLVKGAPSLRRKFIDIDLGQIKPVYLSEL
SHYNHVLKQRNSYLKSAQQIDAAFLAVLDEQLASYGARVMEHRIDFINAL
EKEANTHHQAISNGLESLSLSYQSSVVFDKKTNIYQQFLHQLEKNHQKDF
FRKNTSVGPHRDELAFYINGMNANFASQGQHRSLILSLKMAEVSLMKALT
GDNPILLLDDVMSELDNTRQTKLLETVIKENVQTFITTTSLDHLSQLPEG
IRIFHVTKGTVQIDSDIH
>M5005_Spy1519 recG, ATP-dependent DNA helicase
MILTAPMSNLKGFGPKSAEKFQKLDIYTVEDLLLYYPFRYEDFKSKSVFD
LVDGEKAVITGLVVTPANVQYYGFKRNRLSFKLRQGEAVLNVSFFNQPYL
ADKIELGQEVAVFGKWDATKSAITGMKVLAQVEDDMQPVYRVAQGISQST
LIKAIKSAFEIDAHLELKENLPATLLEKYRLMGRSQACLAMHFPKDITEY
KQALRRIKFEELFYFQMNLQVLKAENKSETNGLPILYSKRAMETKISSLP
FILTNAQKRSLDDILSDMSSGAHMNRLLQGDVGSGKTVIAGLSMYAAYTA
GFQSALMVPTEILAEQHYISLQELFPDLSIAILTSGMKAAVKRTVLAAIA
NGSVDMIVGTHALIQDSVQYHKLGLVITDEQHRFGVKQRRIFREKGENPD
VLMMTATPIPRTLAITAFGEMDVSIIDELPAGRKPIMTRWVKHEQLGTVL
EWVKGELQKDAQVYVISPLIEESEALDLKNAVALHAELSTYFEGIAKVAL
VHGRMKNDEKDAIMQDFKDKKSHILVSTTVIEVGVNVPNATIMIIMDADR
FGLSQLHQLRGRVGRGYKQSYAVLVANPKTDSGKKRMTIMTETTDGFVLA
ESDLKMRGSGEIFGTRQSGIPEFQVADIVEDYPILEEARKVSAAIVSDPN
WIYEKQWQLVAQNIRKKEVYD
>M5005_Spy1228 recN, DNA repair protein
MLLEISIKNFAIIDEISLNFENGMTVLTGETGAGKSIIIDAMNMMLGARA
STEVIRRGANKAEIEGFFSVDATPELVACLESSGIAMEEELIIRRDIFAN
GRSVSRINGQMVNLATLKQVGQFLVDIHGQHDQEELMRPQLHQQILDAFG
DKAFEQLKENYQLIFDRYKSLRRQVIDKQKNEKEHKDRIDMLAFQIAEIE
AAALSRGEDDRLNQERDRLMNHKQIADTLTNAYVMLDNDDFSSLSNIRSS
MNDLLSIEQFDSEYKGMSTSISEAYYILEEVSKQLSDTIDQLDFDGGRLQ
EIEFRLDILNSLTRKYGGNVNDVLDYYDNIVKEYQLLTGDDLSSGDLEAE
LKSLEKQLVAAASELSVSRHQLAEQLEAEIKAELKELYMEKADFKVHFTT
SKFNRDGNESLEFYISTNPGEGFKPLVKVASGGELSRLMLAIKAAISRKE
DKTSIVFDEVDTGVSGRVAQAIAQKIYKIGRHGQVLAISHLPQVIAIADY
QYFISKESKEESTVSKVRLLTPEERVEEIASMIAGTDMTQAALTQARELL
AKH
>M5005_Spy0019 recO, DNA repair protein
MQLTESLGIVLFNRNYREDDKLVKIFTEVAGKQMFFVKHISRSKMSSIIQ
PLTIADFIFKLNDTGLSYVVDYSNVNTYRYINNDIFRLAYASYVLALADA
AIADNESDSHLFTFLKKTLDLMEEGLDYEILTNIFEIQILDRFGISLNFH
ECAICHRTDLPLDFSHRFSAVLCSEHYYKDNRRNHLDPNVIYLLSRFQKI
TFDDLRTISLNKDIKKKLRQFIDELYHDYVGIKLKSKTFIDNLVKWGDIM
K
>M5005_Spy1159 recR, recombination protein
MLYPTPIAKLIDSYSKLPGIGIKTATRLAFYTIGMSNEDVNDFAKNLLAA
KRELTYCSICGNLTDDDPCHICTDTSRDQTTILVVEDAKDVSAMEKIQEY
HGYYHVLHGLISPMNGVGPDDINLKSLITRLMDGKVSEVIVATNATADGE
ATSMYISRVLKPAGIKVTRLARGLAVGSDIEYADEVTLLRAIENRTEL
>M5005_Spy0595 rexA, ATP-dependent nuclease subunit A
MLFNINEKGEPLVISFAPFLSPEAIKHLQENERCRDQSQKRTAQQIEAIY
TSGQNILVSASAGSGKTFVMVERILDKILRGVSIDRLFISTFTVKAATEL
RERIENKLYSQIAQTTDFQMKVYLTEQLQSLCQADIGTMDAFAQKVVSRY
GYSIGISSQFRIMQDKAEQDVLKQEVFSKLFNEFMNQKEAPVFRALVKNF
SGNCKDTSAFRELVYTCYSFSQSTENPKIWLQENFLSAAKTYQRLEDIPD
HDIELLLLAMQDTANQLRDVTDMEDYGQLTKAGSRSAKYTKHLTIIEKLS
DWVRDFKCLYGKAGLDRLIRDVTGLIPSGNDVTVSKVKYPVFKTLHQKLK
QFRHLETILMYQKDCFSLLEQLQDFVLAFSEAYLAVKIQESAFEFSDIAH
FAIKILEENTDIRQSYQQHYHEVMVDEYQDNNHMQERLLTLLSNGHNRFM
VGDIKQSIYRFRQADPQIFNQKFRDYQKKPEQGKVILLKENFRSQSEVLN
VSNAVFSHLMDESVGDVLYDEQHQLIAGSHAQTVPYLDRRAQLLLYNSDK
DDGNAPSDSEGISFSEVTIVAKEIIKLHNDKGVPFEDITLLVSSRTRNDI
ISHTFNQYGIPIVTDGGQQNYLKSVEVMVMLDTLRTINNPRNDYALVALL
RSPMFAFDEDDLARIALQKDNELDKDCLYDKIQRAVIGRGAHPELIHDTL
LGKLNVFLKTLKSWRRYAKLGSLYDLIWKIFNDRFYFDFVASQAKAEQAQ
ANLYALALRANQFEKSGYKGLYRFIKMIDKVLETQNDLADVEVATPKQAV
NLMTIHKSKGLQFPYVFILNCDKRFSMTDIHKSFILNRQHGIGIKYLADI
KGLLGETTLNSVKVSMETLPYQLNKQELRLATLSEEMRLLYVAMTRAEKK
VYFIGKASKSKSQEITDPKKLGKLLPLALREQLLTFQDWLLAIADIFSTE
DLYFDVRFIEDSDLTQESVGRLQTPQLLNPDDLKDNRQSETIARALDMLE
AVSQLNANYEAAIHLPTVRTPSQLKATYEPLLEPIGVDIIEKSSRSLSDF
TLPHFSKKAKVEASHIGSALHQLMQVLPLSKPINQQTLLDALRGIDSNEE
VKTALDLKKIESFFCDTSLGQFFQTYQKHLYREAPFAILKLDPISQEEYV
LRGIIDAYFLFDDHIVLVDYKTDKYKQPIELKKRYQQQLELYAEALTQTY
KLPVTKRYLVLMGGGKPEIVEV
>M5005_Spy0594 rexB, ATP-dependent nuclease subunit B
MKLIYTEMSYSMTEILVNEARKAADQGYRVFYIAPNSLSFEKEREVLTLL
PERGTFSIIVTRFVQMSRYFTVESSPSKQHLDDTTLAMIFYRALMQLKPE
DLPSYGRLQNNSVFIEQLVELYKELKNAQLSVHDLTGLDHPKKQEDLIKI
IELAETIMIQQDYNQDSPLQSFARAIKLGLLNNQLSKTVVVIDGFSRFSA
EEDYLLSLLNNNCQEVIIGSYVSQKAYQKSFIKGNIYEASLHFLQDLAQK
YHIKPVFATSNQVFKPAFSRLTQLFEATHDFSQVDWQLQKSDLDHFSLWQ
CHHQKEEIEHVAKSIRQKLYEGYRYKDILVLLGDMDAYQLQIGPIFDKFE
IPYYLGKAEPMAAHPLVQFIESLERSQRYNWRREDILNMLKSGLFGCFDD
SDIDRFEEYTQFADIKGFTKFSKPFTINSSRQYPLDFLNEMRQDIVLPLQ
ELFKSQKQLGASLVDKLILFLKKIRLAENMQGLAQSQLEVEKNEEVWKRF
TDILTSFHHIFGQEKLRLSDCLALIKTGMKSAQYRVVPATLDVVTIKSYD
LVQPHSKPFVYAIGLTQSHFPKQIHHSGLLSDQERARINEIRNYRHFDIA
SAENSKKNHQTALSLFNAATKELVLSVSTVINETFDDLSPYLKELINFGL
PLLDKGKNYLSYDNSDIGNYKALLSQIIAINRQDLIEMSDQDKMFWTVVL
RYLRKQLRKQQLELPTSDYRLSTKPLSKEVIEVCFPKGIPLKLSATALTV
FYNNQYNYFLKYVLNLNKTESIHPDSRIHGQYLHRVFERLMKDHTQEPFD
NKLKQAIYHTNQESFFQQVYQDNAEAEYSLAILEDIVRSTAPILQLNQNI
QVIDQEKNFQLDMGNEILVHGIIDRIDQLSDGSLGIVDYKSSANQFDIGT
FYNGLSPQLMTYLAALKQIAPHDINQLFGAMYLHLQDPKLDLVTFKQIDN
TLVESIYKALTYKGIFSEVEKEHLSTGAYQTKNALYSNDELETLLNYNKY
LYLKAAKHIKKGHFLINPYTSDGKTVQGDQLKAITRFEADLDMGQARRLV
TLPAKEKKECFLTLMRKESHL
>M5005_Spy1802 ruvA, holliday junction DNA helicase
MYDYIKGQLTKITAKYIVVEANGLGYMINVANPYSFTDSVNQLVTIYLHQ
VIREDAHLLFGFHTEDEKDVFLKLISVSGIGPTTALAIVAVDDNEGLVNA
IDNSDIKYLMKFPKIGKKTAQQMVLDLAGKFVEAPQETGHTKARSNKAGN
TQLDEAIEALLALGYKAKELKKIRAFFEGTSETAEQYIKSALKLLMKG
>M5005_Spy0035 ruvB, holliday junction DNA helicase
MARILDNNVMGNEEFSDRTLRPQYLHEYIGQDKVKEQFAIFIEAAKRRDE
SLDHVLLFGPPGLGKTTMAFVIANELGVNLKQTSGPAVEKAGDLVAILNE
LEPGDILFIDEIHRMPMSVEEVLYSAMEDFYIDIMIGAGDTSRSIHLDLP
PFTLIGATTRAGMLSNPLRARFGITGHMEYYQEKDLTEIVERTATIFEIK
IDHEAARKLACRSRGTPRIANRLLKRVRDYAQIIGDGIITAQITDRALTM
LDVDREGLDYIDQKILRTMIEMYQGGPVGLGTLSVNIAEERNTVEEMYEP
YLIQKGFLMRTRTGRVATQKAYRHLGYPYQNT
>M5005_Spy1630 salB, serine (threonine) dehydratase
MIKRNELKLEYQQHQFYEYFNSIFDYDILDTSIRETSEVLRKKTHKLFYS
EFENQLFETIMFLSMKTLVLDINHFSKEIENKSEAYEQYIQQIREENGIN
HFFDRYPYLLKQINKEVGLIEESYSLLFDRFLEDLSEIKSCFNISEPLSN
VAFSLGDSHSKKQTVVKIAFKEKSVYYKPKSYHSHSILLELTSLLKSSNI
PSFSLPKSLVKADYCWQLGVAYTSSNKDEVAKIYFKYGVLAAFSEIFSIT
DLHMENVIVSGGDLYLIDVETFFQRKLNVQNQNFEGITVDTYQRIYETSL
SNGLFPVQFEKNSAPNVSGISGKGGKRKKGKYELINKNRGDMKLVKVDYF
QEDGFNIPTLNGKVVEPLDYANEIISGFRECYIFLLSQRSKIKEIVEGFP
ELKSRVPFRNTSDYGKFLQASTNPKYLFSEKKRKNLFSILYETKHIEHFI
VDNEIKDLMNGDIPYFSMDTRGNVYNSVGTLIGNLGDTTSLFDSITILND
ERLKFTCELLEIVLKKPIKHWEREKGKSYQFLSISSEHYLL
>M5005_Spy0884 smf, hypothetical protein
MNHFELYKLKKAGLTNKNILNILDYQKHQEKSLSLRDMAVVSGCKHPSHF
IEAYKQLDIQNLKMEFKQFPSISILDKHYPMALKEIYNPPVLLFFQGNLD
LLEKPKLAIVGSRRSSDTGVKSVRKILKELGNRFVIVSGLARGIDTSAHL
ACLKNGGQTIAIIGTGLDRFYPKENRELQTFLGKNHLVLTEYGPGEEALS
YHFPERNRIIAGLSRGILVVEAKNRSGSLITCQIGIEEGRDIFAVPGNIL
DGKSEGCLQLIKEGATCVTSGMDILSEY
>M5005_Spy0288 snf, SWF/SNF family helicase
MMARLIPGRVRNEGIKLYEQGLVSFQDDNKGILQIEVETYQVQYGADDED
ITCQCDTFHMKHYCKHIAAVEYFLKNDQKGKLFLKQLTNQTKIKETTKKM
TSFGSLFLDSLAMNEDDSVKYRLSALGSRSPFSSDYWWSLKINRLPDDRS
YVIRDIKGFLQLIKKEGFYQIGKNYFEQLSWLQFDPSSQALIEFLWRLAS
DTDKGDNENIFPNHARHLRLPSGFFEEGIHYLTSLYDFTFEGPSQTYHHL
FVRSLEAEAGLYEFKVEVHRKSIELQIAEKNVQYLFDNDYLLYQDTFYHL
TLKQRKMVQAIRSLPIEADLAKHIHFDLDDHAKLAASLSDFKQIGLVEAP
KSFAIRDFEVTFQFDLLNRDEISCQLMFDYGNYQVSDKASLEALPFASHL
KKEEKINRSLLAFGFSPQFYSKKRLTSAKELYTFFEETVPCFERLGNVAL
STAIQALQVKEMPKIAIRRNQGLLDISFDFSTIIENDIDQAVTALFQNNP
YFVSQTGQLVVFDDETQKVSKSLQELRARQLKNGHLQLDGIRALQVSKLF
EGMTSVHFSKELEELAYHLQHPETFSIKPLPVKAQMRDYQRNGVQWLSML
NHYGFGGILADDMGLGKTLQTLAFLASHLKSDSKVLILSPSSLIYNWFDE
CQKFTPQLDVVVSYGLKQIRDQIIEEGHQITITSYSSFRQDFETYQAFHY
DYLILDEAQVIKNAQTKISHCLRAFNTANCFALSGTPIENKMLEIWSIFQ
IVLPGLLPTKKEFLKLTAEQVSRYIKPFVMRRKKEDVLPELPDLIETNYS
NEMTDEQKAIYLAQLRQMQDQIRNSSDVDISRQKIEILSGITRLRQICDT
PSLFMDYQGKSGKLDSLRILLTQIKENGHRALIFSQFRGMLDLAKQEMTA
LGLTSYQMTGSTPANERQEMTRAFNNGSKDAFLISLKAGGVGINLTGADT
VILIDLWWNPAVEMQAISRAYRIGQKENVEVYRLITRGTIEEKILELQES
KRNLVTTVLDGNESRASMSIEEIKEILGLNTH
>M5005_Spy0803 srtI, protein involved in lantibiotic production
MEHQIERLIAEDIYIKVSFSVKQSGLIFIPNYQLDIRKEENHKKYKVYIR
ETAQFFIYNKEASELNRYMRGHELICQLTNDSKSIPKRRRQTIDTLKKKI
EEISLLIELDTENKPYQDIKDDIVKDMAQLDLTITELQDHIAHLNKVAEV
LLNLNNNDIENRRLARYDYAKMNLTAAIKIEEVEKEIETSQNELNISIDE
YEYLVRRLEKFGEILSDSKIIDTSRNEIQWE
>M5005_Spy1036 ssb2, phage single-strand DNA binding protein
MINNIVLVGRMTKDAELRYTASQVAVATFTLAVNRRFKEQNGEREADFIN
CVIWRQSAENLANWAKKGALIGVTGRIQTRNYENQQEQRVYVTEVVAESF
QMLESRNSQQQSGQDNSSQNDNSQPFGNSNPMDISDDDLPF
>M5005_Spy1554 ssb3, phage single-strand DNA binding protein
MINNVVLVGRMTKDAELRYTPSQVAVATFTLAVNRTFKSQNGEREADFIN
CVIWRQPAENLANWAKKGALIGVTGRIQTRNYENQQGQRVYVTEVVADNF
QMLESRATREGGSTGSFNGGFNNNTSSSNSYSAPAQQTPNFGRDDSPFGN
SNPMDISDDDLPF
>M5005_Spy1801 tag, DNA-3-methyladenine glycosylase
MKRCSWVPKDNQLYCDYHDLEWGQPLDDDRDFFELLCLESYQSGLSWLTV
LKKRQAFRTVFHHYDIASVATFTSEEMADALENPSIIRHKLKLAATVNNA
IAVQKIQKEFGSFSTYLWNFVGGKPINNLVNQENLVPAQTELSIRLAKDL
KKRGFKFLGPTTVYSFMQASGLVNDHEEACVFNRIF
>M5005_Spy0220 tatD, sec-independent protein translocase protein
MWLRSLCYNNIMTNKVEKLTIFDTHTHLNVAEFQGHETEELTLAQEMGVA
YHNVVGFDQATISGALTLANKYANIYATIGWHPTEAGSYSEAVEEAIVSQ
LSHSKVIALGEIGLDYYWMEDPKEVQIEVFKRQMQLAKDHDLPFVVHTRD
ALEDTYEVIKAAGVGPRGGIMHSYSGSLEMAERFIELGMMISFSGVVTFK
KALDIQEAAQHLPLDKILVETDAPYLTPVPKRGKQNHTAYTRYVVDKIAE
LRGMTVEEVAKATTANAKRVFKLD
>M5005_Spy0006 trcF, transcription-repair coupling factor
MDILELFSQNKKVQSWHSGLTTLGRQLVMGLSGSSKTLAIASAYLDDQKK
IVVVTSTQNEVEKLASDLSSLLDEELVFQFFADDVAAAEFIFASMDKALS
RIETLQFLRNPKSQGVLIVSLSGLRILLPNPDVFTKSQIQLTVGEDYDSD
TLTKQLMTIGYQKVSQVISPGEFSRRGDILDIYEITQELPYRLEFFGDDI
DSIRQFHPETQKSFEQLEGIFINPASDLIFEVSDFQRGIEQLEKALQTAQ
DDKKSYLEDVLAVSKNGFKHKDIRKFQSLFYEKEWSLLDYIPKGTPIFFD
DFQKLVDKNARFDLEIANLLTEDLQQGKALSNLNYFTDNYRELRHYKPAT
FFSNFHKGLGNIKFDQMHQLTQYAMQEFFNQFPLLIDEIKRYQKNQTTVI
VQVESQYAYERLEKSFQDYQFRLPLVSANQIVSRESQIVIGAISSGFYFA
DEKLALITEHEIYHKKIKRRARRSNISNAERLKDYNELAVGDYVVHNVHG
IGRFLGIETIQIQGIHRDYVTIQYQNSDRISLPIDQISSLSKYVSADGKE
PKINKLNDGRFQKTKQKVARQVEDIADDLLKLYAERSQQKGFSFSPDDDL
QRAFDDDFAFVETEDQLRSIKEIKADMESMQPMDRLLVGDVGFGKTEVAM
RAAFKAVNDHKQVAVLVPTTVLAQQHYENFKARFENYPVEVDVLSRFRSK
KEQAETLERVRKGQIDIIIGTHRLLSKDVVFSDLGLIVIDEEQRFGVKHK
ETLKELKTKVDVLTLTATPIPRTLHMSMLGIRDLSVIETPPTNRYPVQTY
VLENNPGLVREAIIREMDRGGQIFYVYNKVDTIEKKVAELQELVPEASIG
FVHGQMSEIQLENTLIDFINGDYDVLVATTIIETGVDISNVNTLFIENAD
HMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKVLTEVSEKRLEAIKGFTEL
GSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEQAIASKQGK
TTVRQKGNTEINLQIDAYLPDDYIADERQKIDIYKRIREIQSREDYLNLQ
DELMDRFGEYPDQVAYLLEIALLKHYMDNAFAELVERKNNQVIVRFEVTS
LTYFLTQDYFEALSKTHLKAKISEHQGKIDIVFDVRHQKDYRILEELMLF
GERLSEIKIRKNNSVFK
>M5005_Spy0708 ung, uracil-DNA glycosylase
MAHSIWHEKIKSFLPEHYYGRINHFLDEAYASGLVYPPRENVFKALQVTP
LEETKVLILGQDPYHGPKQAQGLSFSVPEEISAPPSLINILKELADDIGP
RDHHDLSTWASQGVLLLNACLTVPAGQANGHAGLIWEPFTDAVIKVLNEK
DSPVVFILWGAYARKKKAFITNPKHHIIESPHPSPLSSYRGFFGSKPFSR
TNAILEKEGMTGVDWLK
>M5005_Spy1550 uvrA, excinuclease ABC subunit A
MRRVPLGTFKMQNKIIIHGARAHNLKNIDVEIPRDKLVVVTGLSGSGKSS
LAFDTIYAEGQRRYVESLSAYARQFLGNMEKPDVDSIDGLSPAISIDQKT
TSKNPRSTVGTVTEINDYLRLLYARVGTPYCINGHGAITASSAEQIVEQV
LALPERTRMQILAPVVRRKKGQHKTVFEKIQKDGYVRVRVDGDIFDVTEV
PELSKSKMHNIEVVIDRLVNKDGIRSRLFDSVEAALRLGDGYLMIDTMDG
NELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGIKLEVDLD
LVVPDPSKSLREGALAPWNPISSNYYPTMLEQAMASFGVDMDTPFEALTE
EERDLVLYGSGDREFHFHYVNDFGGERNIDIPFEGVVTNVNRRYHETNSD
YTRNVMRGYMNELTCATCHGYRLNDQALCVHVGGEEGPHIGQISELSIAD
HLQLLEELELTENESTIAKPIVKEIHDRLTFLNNVGLNYLTLSRAAGTLS
GGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIESLKKMRDLG
NTLIVVEHDEDTMMQADWLIDVGPGAGEFGGEITASGTPKQVAKNKKSIT
GQYLSGKKFIPVPLERRSGNGRFIEIKGAAQNNLQSLDVRFPLGKFIAVT
GVSGSGKSTLVNSILKKAVAQKLNRNADKPGKYHSISGIEHIERLIDIDQ
SPIGRTPRSNPATYTGVFDDIRDLFAQTNEAKIRGYKKGRFSFNVKGGRC
EACSGDGIIKIEMHFLPDVYVPCEVCHGRRYNSETLEVHYKGKNIAEVLD
MTVDDALVFFSAIPKIARKIQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLERFVDDGNTVLVIEH
NLDVIKSADHIIDLGPEGGDGGGQIVATGTPEEVAQVKESYTGHYLKVKL
QQ
>M5005_Spy1075 uvrB, excinuclease ABC subunit B
MIDKRDDKPFKLKSKYKPSGDQPQAIESLVDNIEGGEKAQILLGATGTGK
TYTMSQVISKVNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDY
YQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSSLLERNDVIVVASVSCI
YGLGSPKEYADSAVSLRPGQEISRDTLLNQLVDIQFERNDIDFQRGCFRV
RGDVVEVFPASRDEHAFRVEFFGDEIDRICEIESLTGKTIGEVDHLVLFP
ATHFVTNDEHMEQSIAKIQAELAEQLQLFESEGKLLEAQRLRQRTEYDIE
MLREMGYTSGVENYSRHMDGRSPGEPPYTLLDFFPEDFLIMIDESHMTMG
QIKGMYNGDQARKQMLVDYGFRLPSALDNRPLRREEFESHVHQIVYVSAT
PGEYEMSQTNTIIEQIIRPTGLLDPEIDVRSSMGQMDDLLGEINQRVARD
ERTFITTLTKKMAEDLTDYLKEMGVKVKYMHSDIKTLERTEIIRDLRLGV
FDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNV
DGHVIMYADKMTDSMQRAIDETARRREIQIAYNKAHGIVPQTIKKDIRGL
ISISKTSHNDISKEEMDYESMSRGERKEAINALQKQMQEAAELLDFELAA
QMRDLILELKLMD
>M5005_Spy0791 uvrC, excinuclease ABC subunit C
MNELIKHKLELLPDSPGCYLHKDKEGTIIYVGKAKNLKKRVRSYFRGSHD
TKTELLVSEIVDFEYIVTESDTEALLLEINLIQKNMPKYNIKLKDDKSYP
FLKITNESFPRLVITRYIKKNDGLYFGPYPDSYTANEVKKLLDRIFPFKK
CKNPINKVCFYYHLGQCCAHTICHTDKAYWDRLIDDVKHFLNGKDDKIIE
DLRSKMLAASKEMAFERAAEYRDLISGIATMRTKQRVMSKDLQDRDIFGY
YVDKGWMCVQVFFVRQGKLIQRDVNLFPYYTDAEEDFLTYMGQFYQDKQH
FIPKEVFIPEAIDEELVAAIVPTKIIKPKRGEKKQLVALATKNARVSLQQ
KFDLLEKDIKKTSGAIENLGQLLRIDKPVRIEAFDNSNIQGTSPVAAMVV
FVDGKPSKKDYRKFKIKTVVGPDDYASMREVLFRRYSRVKKEGLQAPNLI
IVDGGVGQVNVAKDVIEKQLGLTIPVAGLQKNDKHQTHDLLFGNPLEVVP
LPRRSEEFFLLHRIQDEVHRFAVTFHRQVRRKNSFSSTLDHISGLGPKRK
QLLLRHFKTITAIASATSEEIQALGIPKTVVEAIQQQITDNKNDRSSP
>M5005_Spy0913 xerD, recombinase
MDADLTQAPKIADIDLSTLEHLTKKDLEAFVLYLRERPSLNTYSTKEGLS
QTTINRTLSALSSLYKYLTEEVENDQGEPYFYRNVMKKVSTKKKKETLAS
RAENIKQKLFLGDETLAFLDYVDKEYEQKLSNRAKSSFRKNKERDLAIIA
LLLASGVRLSEAVNLDLKDVNLNMMIIEVIRKGGKRDSVNVAGFAKGYLE
SYLAVRQRRYKAEKQDLAFFLTEYRGVPNRMDASSIEKMVGKYSEDFKIR
VTPHKLRHTLATRLYDATKSQVLVSHQLGHSSTQVTDLYTHIVNDEQKNA
LDNL
>M5005_Spy1232 xseB, exodeoxyribonuclease VII small subunit
MSKTKTFEENLQDLETIVNKLENGDVPLEEAISEFQKGMLLSKELQKTLQ
AAEKTLVKVMQADGTEVDMDD