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2024-04-30 16:33:59

Gene list

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COG category: Replication, recombination and repair
Organism: Streptococcus pyogenes phage 5005.3

Number of genes found: 151

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Streptococcus pyogenes phage 5005.3
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA M5005_Spy1351 methyltransferasechromosome CDS1318923 1155 - 0.393939
NA M5005_Spy1699 ATPase, AAA familychromosome CDS1659265 1269 + 0.429472
NA M5005_Spy0172 transposasechromosome CDS183562 516 - 0.366279
NA M5005_Spy1003 phage proteinchromosome CDS988595 369 - 0.368564
NA M5005_Spy1441 phage terminase small subunitchromosome CDS1409611 495 - 0.40202
NA M5005_Spy0166 transposasechromosome CDS178801 216 - 0.342593
NA M5005_Spy0777 collagen-like surface proteinchromosome CDS782375 882 + 0.470522
NA M5005_Spy0557 transposasechromosome CDS549398 591 - 0.402707
NA M5005_Spy1605 transposasechromosome CDS1562239 1134 - 0.381834
NA M5005_Spy0112 transposasechromosome CDS122807 1323 - 0.421769
NA M5005_Spy1146 DNA polymerase III, delta subunitchromosome CDS1122001 1041 - 0.367915
NA M5005_Spy0113 transposasechromosome CDS124370 351 - 0.407407
NA M5005_Spy0376 transposasechromosome CDS380469 1134 + 0.381834
NA M5005_Spy1010 phage proteinchromosome CDS998017 459 - 0.411765
NA M5005_Spy0307 DNA integration/recombination/invertion proteinchromosome CDS315845 747 + 0.327979
NA M5005_Spy1286 DNA polymerasechromosome CDS1240477 1026 - 0.380117
NA M5005_Spy1204 recT proteinchromosome CDS1169334 930 - 0.38172
NA M5005_Spy1796 endonuclease involved in recombinationchromosome CDS1764542 420 - 0.37619
NA M5005_Spy0298 transposasechromosome CDS309533 705 - 0.382979
NA M5005_Spy0093 adenine-specific methyltransferasechromosome CDS105765 954 + 0.383648
NA M5005_Spy1712 transposasechromosome CDS1672709 1134 - 0.380071
NA M5005_Spy1447 phage-related DNA helicasechromosome CDS1412038 1323 - 0.415722
NA M5005_Spy0187 transposasechromosome CDS196059 705 + 0.382979
NA M5005_Spy0737 mutator mutT protein/7,8-dihydro-8-oxoguanine-triphosphatasechromosome CDS739788 477 + 0.392034
NA M5005_Spy1223 DNA-binding protein HUchromosome CDS1178876 276 - 0.405797
NA M5005_Spy1444 adenine-specific methyltransferasechromosome CDS1410747 852 - 0.383803
NA M5005_Spy1215 phage proteinchromosome CDS1173399 807 + 0.36803
NA M5005_Spy1148 COME operon protein 1chromosome CDS1125336 663 - 0.374057
NA M5005_Spy1537 transposasechromosome CDS1495398 705 - 0.38156
NA M5005_Spy0254 transposasechromosome CDS264216 147 - 0.37415
NA M5005_Spy1043 phage proteinchromosome CDS1014694 831 - 0.322503
NA M5005_Spy1127 transposase pseudogenechromosome CDS1103462 297 + 0.383838
NA M5005_Spy0800 DNA-cytosine methyltransferasechromosome CDS802963 324 + 0.41358
NA M5005_Spy0297 transposasechromosome CDS309115 516 - 0.362403
NA M5005_Spy0167 transposasechromosome CDS179056 570 - 0.389474
NA M5005_Spy1126 transposase pseudogenechromosome CDS1103214 216 + 0.365741
NA M5005_Spy0885 DNA topoisomerase Ichromosome CDS875119 2130 + 0.381221
NA M5005_Spy1364 ATP-dependent RNA helicasechromosome CDS1333355 1344 - 0.419643
NA M5005_Spy1564 ribonuclease HIIIchromosome CDS1522577 903 + 0.369878
NA M5005_Spy0171 transposasechromosome CDS182735 807 - 0.395291
NA M5005_Spy0456 plasmid stabilization system antitoxin proteinchromosome CDS450317 303 + 0.372937
NA M5005_Spy0294 transposasechromosome CDS307269 144 - 0.291667
NA M5005_Spy0396 transposasechromosome CDS394348 150 - 0.34
NA M5005_Spy0387 uracil DNA glycosylase superfamily proteinchromosome CDS389509 576 + 0.421875
NA M5005_Spy0258 transposasechromosome CDS272062 516 + 0.360465
NA M5005_Spy0165 transposasechromosome CDS178519 243 - 0.403292
NA M5005_Spy0257 transposasechromosome CDS271455 705 + 0.384397
NA M5005_Spy1034 phage proteinchromosome CDS1010950 441 - 0.396825
NA M5005_Spy0665 transposasechromosome CDS670870 219 - 0.30137
NA M5005_Spy1536 transposasechromosome CDS1494980 516 - 0.364341
NA M5005_Spy1824 phosphohydrolasechromosome CDS1791265 642 - 0.389408
NA M5005_Spy1716 transposasechromosome CDS1679185 1206 + 0.440298
NA M5005_Spy0168 transposasechromosome CDS179658 216 - 0.375
NA M5005_Spy1287 hypothetical proteinchromosome CDS1241499 675 - 0.398519
NA M5005_Spy1151 hypothetical protein with endo/excinuclease domainchromosome CDS1127822 279 + 0.362007
NA M5005_Spy0391 phosphohydrolasechromosome CDS392128 513 + 0.405458
NA M5005_Spy1833 transposasechromosome CDS1798203 1134 - 0.380071
NA M5005_Spy0221 ribonuclease M5chromosome CDS226198 591 + 0.443316
NA M5005_Spy0016 transposase fragmentchromosome CDS30106 144 - 0.361111
NA M5005_Spy1268 methyltransferasechromosome CDS1222136 540 - 0.37963
NA M5005_Spy1767 transposasechromosome CDS1726595 1134 - 0.380071
NA M5005_Spy1002 N-acetylmuramoyl-L-alanine amidasechromosome CDS988263 333 - 0.39039
NA M5005_Spy1091 transposasechromosome CDS1063824 657 + 0.403349
NA M5005_Spy1450 phage-encoded DNA polymerasechromosome CDS1416408 1923 - 0.444618
NA M5005_Spy1288 hypothetical cytosolic proteinchromosome CDS1242175 849 - 0.380448
NA M5005_Spy0188 transposasechromosome CDS196666 516 + 0.360465
NA M5005_Spy1209 DNA replication proteinchromosome CDS1171217 390 - 0.35641
NA M5005_Spy1128 transposase pseudogenechromosome CDS1104071 222 + 0.333333
NA M5005_Spy1839 phosphohydrolasechromosome CDS1806192 318 - 0.349057
NA M5005_Spy1233 exodeoxyribonuclease VII large subunitchromosome CDS1186855 1341 - 0.423564
NA M5005_Spy1112 DNA polymerase III subunit gamma/tauchromosome CDS1087210 1671 - 0.405745
NA M5005_Spy1090 transposasechromosome CDS1063136 516 + 0.366279
NA M5005_Spy0111 hypothetical proteinchromosome CDS121973 648 + 0.317901
NA M5005_Spy0467 transposasechromosome CDS457645 714 - 0.338936
NA M5005_Spy0468 transposasechromosome CDS458406 276 - 0.373188
NA M5005_Spy0770 hypothetical cytosolic proteinchromosome CDS777446 870 + 0.355172
NA M5005_Spy0363 phosphohydrolasechromosome CDS369173 555 + 0.407207
NA M5005_Spy0102 single-strand DNA binding proteinchromosome CDS112295 396 + 0.383838
NA M5005_Spy1642 DNA integration/recombination/invertion proteinchromosome CDS1605209 183 + 0.442623
NA M5005_Spy0883 ribonuclease HIIchromosome CDS873320 792 + 0.406566
NA M5005_Spy0816 integrase pseudogenechromosome CDS811818 384 + 0.346354
NA M5005_Spy1863 transposasechromosome CDS1834881 282 - 0.382979
NA M5005_Spy0395 transposasechromosome CDS394230 180 - 0.361111
NA M5005_Spy1285 hypothetical cytosolic proteinchromosome CDS1240173 294 - 0.391156
NA M5005_Spy1042 phage replication proteinchromosome CDS1013925 783 - 0.392082
NA M5005_Spy0397 transposasechromosome CDS394494 423 - 0.385343
NA M5005_Spy0881 hypothetical cytosolic proteinchromosome CDS871823 441 - 0.376417
NA M5005_Spy1645 DNA integration/recombination/invertion proteinchromosome CDS1606013 150 + 0.366667
comFA M5005_Spy1327 COMF operon protein 1chromosome CDS1293295 1215 - 0.362963
deaD M5005_Spy1154 ATP-dependent RNA helicasechromosome CDS1130251 1620 - 0.418519
deaD2 M5005_Spy1117 ATP-dependent RNA helicasechromosome CDS1091451 1086 + 0.389503
dinG M5005_Spy0536 ATP-dependent helicasechromosome CDS522841 2460 + 0.383333
dinP M5005_Spy1568 DNA polymerase IVchromosome CDS1527260 1095 - 0.416438
dnaA M5005_Spy0001 chromosomal replication initiator proteinchromosome CDS202 1356 + 0.334071
dnaB M5005_Spy0285 replicative DNA helicasechromosome CDS295316 1176 + 0.370748
dnaD M5005_Spy0729 DNA replication proteinchromosome CDS732746 684 + 0.355263
dnaE M5005_Spy0990 DNA polymerase III alpha subunitchromosome CDS977433 3111 - 0.376728
dnaG M5005_Spy0599 DNA primasechromosome CDS601229 1815 + 0.384573
dnaI M5005_Spy0286 primosomal proteinchromosome CDS296492 903 + 0.414175
dnaN M5005_Spy0002 DNA polymerase III beta chainchromosome CDS1712 1137 + 0.331574
dnaQ M5005_Spy1582 DNA polymerase III, epsilon chainchromosome CDS1542240 588 - 0.391156
dnaX M5005_Spy0331 DNA polymerase III, delta' subunitchromosome CDS337655 876 + 0.390411
exoA M5005_Spy0339 exodeoxyribonuclease IIIchromosome CDS342208 912 - 0.423246
fpg M5005_Spy0408 formamidopyrimidine-DNA glycosylasechromosome CDS400856 828 + 0.423913
gyrA M5005_Spy0874 DNA gyrase subunit Achromosome CDS865365 2487 + 0.40008
gyrB M5005_Spy0553 DNA gyrase subunit Bchromosome CDS542704 1953 + 0.399386
holB M5005_Spy1835 replicative DNA helicasechromosome CDS1800257 1368 - 0.38962
int.1 M5005_Spy1052 phi5005.1 integrasechromosome CDS1020579 1089 + 0.334252
int.2 M5005_Spy1222 phi5005.2 integrasechromosome CDS1177644 1143 + 0.356955
int.3 M5005_Spy1467 phi5005.3 integrasechromosome CDS1424880 1080 + 0.381481
lig M5005_Spy0573 NAD-dependent DNA ligasechromosome CDS572270 1959 + 0.405309
mutL M5005_Spy1804 DNA mismatch repair proteinchromosome CDS1770993 1983 - 0.395865
mutS M5005_Spy1805 DNA mismatch repair proteinchromosome CDS1773104 2556 - 0.402582
mutS2 M5005_Spy1561 DNA mismatch repair proteinchromosome CDS1519076 2340 - 0.367949
mutT M5005_Spy1241 mutator protein (7,8-dihydro-8-oxoguanine-triphosphatase)chromosome CDS1197325 456 + 0.392544
mutY M5005_Spy1557 A/G-specific adenine DNA glycosylasechromosome CDS1516461 1002 + 0.38523
nth M5005_Spy0730 endonuclease IIIchromosome CDS733426 657 + 0.400304
parC M5005_Spy0712 topoisomerase IV subunit Achromosome CDS715412 2460 + 0.402846
parE M5005_Spy0711 topoisomerase IV subunit Bchromosome CDS713372 1950 + 0.415897
pcrA M5005_Spy0977 DNA helicase IIchromosome CDS962205 2319 - 0.410953
phr M5005_Spy1236 deoxyribodipyrimidine photolyasechromosome CDS1191282 1410 - 0.37234
polA M5005_Spy0159 DNA polymerase Ichromosome CDS172134 2643 + 0.424139
polC M5005_Spy1672 DNA polymerase III alpha subunitchromosome CDS1625475 4398 - 0.434743
priA M5005_Spy1339 primosomal protein N'chromosome CDS1305641 2385 - 0.386583
radC M5005_Spy0840 DNA repair proteinchromosome CDS834398 681 + 0.321586
recA M5005_Spy1799 RecAchromosome CDS1766029 1137 - 0.407212
recD M5005_Spy1566 exodeoxyribonuclease V alpha chainchromosome CDS1524141 2454 + 0.41524
recF M5005_Spy1855 DNA replication and repair proteinchromosome CDS1823030 1107 + 0.372177
recG M5005_Spy1519 ATP-dependent DNA helicasechromosome CDS1472544 2016 - 0.369544
recN M5005_Spy1228 DNA repair proteinchromosome CDS1182830 1662 - 0.394103
recO M5005_Spy0019 DNA repair proteinchromosome CDS33731 756 + 0.313492
recR M5005_Spy1159 recombination proteinchromosome CDS1137473 597 - 0.40871
rexA M5005_Spy0595 ATP-dependent nuclease subunit Achromosome CDS595671 3669 + 0.364132
rexB M5005_Spy0594 ATP-dependent nuclease subunit Bchromosome CDS592495 3216 + 0.348881
ruvA M5005_Spy1802 holliday junction DNA helicasechromosome CDS1769164 597 - 0.39866
ruvB M5005_Spy0035 holliday junction DNA helicasechromosome CDS54431 999 + 0.396396
salB M5005_Spy1630 serine (threonine) dehydratasechromosome CDS1593724 1626 - 0.309963
smf M5005_Spy0884 hypothetical proteinchromosome CDS874176 837 + 0.391876
snf M5005_Spy0288 SWF/SNF family helicasechromosome CDS298974 3099 + 0.364956
srtI M5005_Spy0803 protein involved in lantibiotic productionchromosome CDS804076 696 + 0.349138
ssb2 M5005_Spy1036 phage single-strand DNA binding proteinchromosome CDS1011599 426 - 0.431925
ssb3 M5005_Spy1554 phage single-strand DNA binding proteinchromosome CDS1514871 492 - 0.426829
tag M5005_Spy1801 DNA-3-methyladenine glycosylasechromosome CDS1768594 561 - 0.392157
tatD M5005_Spy0220 sec-independent protein translocase proteinchromosome CDS225402 825 + 0.425455
trcF M5005_Spy0006 transcription-repair coupling factorchromosome CDS5207 3504 + 0.353881
ung M5005_Spy0708 uracil-DNA glycosylasechromosome CDS710485 654 + 0.422018
uvrA M5005_Spy1550 excinuclease ABC subunit Achromosome CDS1509570 2859 - 0.429171
uvrB M5005_Spy1075 excinuclease ABC subunit Bchromosome CDS1047571 1992 - 0.39257
uvrC M5005_Spy0791 excinuclease ABC subunit Cchromosome CDS795066 1797 + 0.374513
xerD M5005_Spy0913 recombinasechromosome CDS899125 915 - 0.386885
xseB M5005_Spy1232 exodeoxyribonuclease VII small subunitchromosome CDS1186662 216 - 0.347222