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# Candidatus Blochmannia pennsylvanicus str. BPEN, BPEN

>BPEN_113 deaD, cold-shock DeaD box ATP-dependent RNA helicase
MSKTVDSFIDLGLNRYIVNVLHDVGYTKPLPIQIQCIPYLLAGYDVLGMA
HTGSGKTAAFVLPLLHNVDINNSCSQGLIITPTRELAIQIGRVCSNFAKY
MKKINVVTLYGGQSYGIQLSALNKRPHIIVSTPGRLIDHLNRGTANLSQL
KTLVIDEADEMLRMGFLEDVERIIKNIPVKRQTALFSATLPMGIRRISYR
FMNNPKEVFIHSNTSMCANIRQSYWLVHSGIAKHEALMRFLETEDFDAAI
VFVRTKYATLEISEILERFGYNSAALNGDMNQTVRHQTLDRLRHGKLDIL
IATDVAARGLDVHRISLVINYDIPINSDAYIHRIGRTGRAGCMGKSLLFV
EHKEYRLLRHIERKIKLKIPEVQYPTSETLFDCRLSRFTNKVEYQLSTEN
DDLDVYRSLLPQIKPRRDLTTENLAAVLLKIAQGNRPLVFPPDPIIKNKS
VSKIRINSNRQNCFRVENRVIKTRLQSKISDNMDAYHISVGRNDGVKIRH
IIRVLSNNIANIRYHEIGNIKLFSFHAIIELDKGLSSNKILTQLSHARIL
NKPINMKFLGNMSSCNDVH
>BPEN_027 dnaB, replicative DNA helicase
MLRKIEIYAGKILKMHVSHDQQVNNMKIPPYSLEAEQSMLGGLMLDNTQW
EYISVQINSDDFFNYAHRIIFTEMKRLLETNKPIDLITLSESLEIQGKLE
LVGGFAYLAELSKNVPSASNVVAYADIVRERSVIRAMISIANKIADAGYN
PQGRSSDELLDLAESLIFQISHSKSNHNINPKGIDHILEKTVAHIEQVCN
RPKYGVTGVSSGYRDLDKKTDGLQKSDLIIIAARPSMGKTAFAMNLCEHA
AMTEKKPVLIFSLEMPGDQIMIRMLASLSRVDQVRIRTGRLNNEDRERIT
SAMELLLEKRNIYIDDSSCLTPAEVRGRARRLFREHDGLSLIMIDYLQLM
RVPSLSNNRTLEISEISRSLKALAKELKVPVIAISQLNRGLEQRTDKHPV
NSDLRESGAIEQDADLILFIYRDEVYHENSEMKGIAEIILGKQRNGPIGT
IRLMFNGKCSRFDNYVKSGQY
>BPEN_294 dnaE, DNA polymerase III, alpha chain
MIKPRFIHLHVHSDYSMIDGLATVNKLITKAAYLKMPALALTDFNNLFGF
IKFYDVAYKSGIKPIIGADFLVQDLIMDNKPSKLTCLVTDKQGYYHLIML
ISKAYKNKCNNVALMIQRHWLKEYNKGLILLSGGRNGDIGRYLLRNEKSK
IEQCLYFYSKYFPNRYYLELIRTGRQHEESYLQLAIELSIAKGLPVVATN
DVRFINEKDFLAHEVRVAIYAGTTLNNVQQLRKYSSQQFMKSEQEMCELF
SDVPESLVNSVEIAYRCNFTIDLGGYFLPQFPTGCKSAKDFLTTHAKKGL
EERLILLFPKTKERLVQRKPYDLRLKNELQVINNMNFPSYFLIVMEFIKW
AKNNDIPVGPGRGSGASSLVAYVLKITELDPLQFDLLFERFLNPERISMP
DLDIDFCMDHRDLVIEHVSKTYGSEAVSQIITFGTMAAKAVIRDVGRVLG
HPYALINRIAKLIPLESGITLKKAFSIEPQLKLLYENDEDITELIDMALQ
LEGIVRNVSKHAGGVVIAPIKITDFSPLYYDNDSIHPMTQFDKDDIERIG
LIKFDFLGLRTLTIINHALKMINNTRLKQGLTIIDIHSISLHDQKSFHVL
QSSETTAIFQLESRGIKELIKRLKPDCFEDLIALIALFRPGPLQSGMVDN
FINRKHGYETISYPDAKWQHESLRPVLESTYGIILYQEQVMQIAQVLAGY
TLGQADILRRAIGKKKPEDMAKQRSFFNLGAAKNGIDNTLSMKIFDLVEK
FAGYGFNKSHSAAYALISYQTLWLKTHYPAEFMAAALSSDMDNLNKVVYL
IGECQKMKLIISPPNINTSQYHFYVNANKEIVYGFGAIKGIGKTSIESII
TSRNKGGNFKELFDFCIRIDSTKINHRMIEKLILSGACDSFGIHRSKLMA
SLNDVLKRANQHIKNKYSKQTDIFEMRLDESNTIAISDRDDNTPQWSNQL
LLEKEKEALGLYLTSHPTIQYIKTIKRCASNIVNIKDVLLETDNKILHIF
GLIVSIRTKLSKKGKRVVFFILEDYSGRLEIMIFETLIHKYQHCLKENNL
LLVTGVINIDKIHGHYKMIAQKLEDINDIHKKHTRSLSITLKSKQVDNQL
LTNIHFFLEKNKLGTLPVYFFYQKNGIQIKLYCGKKWYITLTDQLLSNLR
SLVGDEQIKLELH
>BPEN_058 dnaG, DNA primase
MTRIPNTVINELISRTNIVDLISQRVPLKKQGKNFLACCPFHTEKHPSFT
VNIEKQFYYCFSCGSHGNVIDFLMHYDRLTFLEAIKELSIMHGISIEKNL
NVCKRNNYLKNNLYQLMNKLCAYYKNILTQKKYLYAYKYLKNRGLNTKTI
DDFNIGFAPPRWNNIIQKFGLTLYDQKLLDQSGMLISSNTKKYKYDRFRD
RLIFPIRDITGRIVAFGGRVITQNKIPKYLNSPDTEIFKKSQHLYGLYEA
RMKHKNLSCILLVEGYIDVITLTQFGINYAVAALGTSTTDNHIRLLYSIT
DQIICCYDGDYAGKKAAWRTLNTALPYLTDERQIHFAFLPHGEDPDTLIR
KIGKDNFLKRLTQTQDLSNFLFETLSKKTNLQTLSGRVKLSSLILPILKK
IPGQTLKLCLLQQLGNKIGILDDNKLSQLLTRKPVTYTNKINRCYVNNSI
GHILVGLLIQNPRLSKLVPSVQGLEQLKQNDIVMFIDLIQICKTYPISTS
AQLLEHYRGNKFFSKLESLAYWNHLITNDMIETTFVDALTKLYNLTLEKR
QELLIARDRTSGLTTQERQELWLLNQTLSKH
>BPEN_015 dnaN, DNA polymerase III, beta-subunit
MNFVIDRKLLYQSLQKVVGILSGRPRMPILTHVLLEVNDNCLCITATDLE
IEITVRVILQDKYPIGSVIVPGRKFFEICRSLSESSKISIVSKDKKMIIC
SGCSKFYLSTFSSLDFPKLEKWGNNLKLVISQAILKKMIELTQFSMGHQD
VRYCLNGILFETKEHILRIVATDGHRLASCEITMDLLLPNQSSIIPRKGV
IEILRLLNVKEKLVNIQTNSNNLRMETENYTFTSKLIDAVFPNCHDVFIK
RSKNVLEVECGILKQALKRAAILANEKLRIVRFTLITNQLKITAHNFEHE
ASEEILDVLYSGKSIKISFNVDYLIDVLQVMDTQFLRFYLTDEISSVQIE
STEKCHGATYIVMPIRI
>BPEN_232 dnaQ, DNA polymerase III, epsilon subunit
MSTNIIRQIVLDTETTGMNKFGPHYEGHRVIEIGAVEIINRHLTDNTFHV
YLKPNRMIDIEAIQVHGISDQFLKNKPIFSEIINEFLTFIRGSELIIHNA
SFDLGFLNQELRICKANSKKIESYCTVIDSLKLARKKFPGQRNSLDALCE
RYSINNGNRRNLHSALLDARLLANVFLSMSGGQIKMKFMEIMNTNISNNK
INNIIGLNNTKCINKRSLRIIYANEQEKLAHEEYLDSIQQLNKFCIWRQ
>BPEN_309 dnaX, DNA polymerase III, tau and gamma subunits
MSYQVLARKWRPKKFSDIVGQEHIIQAITHTFSLNKIHHAYILSGTRGVG
KTTIARLFAKGLNCEQGTTYTMCGQCNNCKDIELGCFIDLIEIDAASRTK
VEDTREFLDNVQYMPSRGRFKVYLIDEVHMLSRHSFNALLKTLEEPPTHV
KFILVTTEYQKLPETILSRCLQFYLKPLNISQIINQLTYIFHKENINIET
SALESLAYASKGSMRDALSLAEQAIVLGNNEITNNVINNMFGISNIEHPL
CLIESLIDEDIHNIMHQIENLTVLGVHWDYVFNEILTILQKIAIGQFLSN
SVQKEDNNVTQHINQRMRRLSNRITPENVQLYYQIFLLGRRELPYAPSHR
MGIEMTMLRALAFRPDVDIANKKNGNGDDNDHILKKSVCSNNNVEINTND
TQHIATDLFQKKNHNQGSKNVLNTEKLKKTNNILLLNFKKSELNSDNTKP
KISKSVSSRDTRDITSTILEARSKLLQYKERDKLNVIEKKSNLTLESQKK
IKDILERFASINTIILKNSSDRFEKINKDLSGYLEFSNNSNNKENLHRNH
QNMPDFIKEILQKAINNNLWISQIYRLSLPKLAKKLVMNSWKEKISSDEI
CLHVRSDYQHLNSTELRNIIQKSLSNNIGIAIKLHIKKDDNYAIKTPMEH
LYTLYKEKISLIKKEFSSDPYVKMIKSFFDAEIDENDIQVLYDQNKNL
>BPEN_492 gyrA, DNA gyrase, subunit A
MNDFAKEITQINIEEELTHSYLDYAMSVIVGRALPDVRDGLKPVHRRILF
AMQVLGNCWNRNYKKSARVVGDVIGKYHPHGDTAVYETIVRMAQPFLMRY
ALVDGQGNFGSVDGDPAAAMRYTEVRMSKIANELLLDLDKETVDYELNYD
GTESIPGILPARIPNLLVNGSSGIAVGMATNIPPHNLSEVINGCLAFIDN
EDITIEELMKYIPGPDFPTAAIINDSGGLKEAYSTGRGKIYIRARSEIET
DVKSGRESIVIYEIPYQVNKARLLEKIAELAKLKRIEGIYNLRDESDKDG
MRIVVEIKRDAISEVILNNLYSLTSLQTSFGINMVALHQGQPKIMSLKDI
LSAFVCHRRAVVIRRVTFELKKARSRIHILEGLAIALFNIDSVIKLIRQS
NSSVEASSVLISSSWNIGNVFDMKQRTSINLMKSEGSEVKNAVHNNQYCL
TKNQAQAILDLKLHKLTTLEYEKLLQEYSSLLEKIKNLISILKDPKCLMR
VIRQELLMIQEEYNDSRRTEISSNIENINVENLINQKDVVVTLSYQGYVK
YQPLTDYEAQKRGGKGKLATRIKEEDFITRLLIANTHDTVLLFSNYGRIY
WMKVYRLPAASRGSRGKPIINLLPLDVNERITAILPIQNYTTGHQVFMAT
SSGVVKKTPLTEFSRPRNVGIIALNLNDGDELIGADVTDGSNEVMLFTAY
GKVVRFKETQVRSVGRSAIGVKGIHLLQGDRVVSLIIPKDKSSILTVTRN
GFGKRTNQSEYPIKSRATQGVISIKVTERNGNVIGAVQVNQSDQIVMITD
LGRLVRTRVSEVNIIRRNTQGVMLIRTACNECVVGLQCVVESV
>BPEN_016 gyrB, DNA gyrase, subunit B
MLSAYDSSSIKILKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDE
AISGYCKKIVVIIHQDHSVSVQDDGRGIPTGIHEEEGVSAAEVIMTILHA
GGKFDNSNYKVSGGLHGVGVSVVNALSERLELVIKRDFKTYKQVYCEGRP
LSPLEIIGDSKHSGTIVRFWPSLKTFTGKTEFQYDILARRFRELSFLNSG
IVIILRDCRNNKEENFHCAGGVKAFVKYLSVNKTPIHPNIFYYLGNKGEI
SIEVALQWNDNFQEKIYSFTNNIPQRDGGTHLAGLRAAITRTMHFYMDKE
GYNRKVKVVTIGDDAREGLVAILSIKIPDPKFSSQTKDKLVSSEVKTAVE
SLVYEKLIEFFLENPIDSKNIINKVIGAARAREAARKIRDLTRRKGLSEF
STLPGKLADCQEKNPVYSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
LNVEKARFDKMLTSQEVMTLITALGCGIGPNEYNPDKLRYHNIIVMTDAD
VDGAHIRTLLLTFFYRQMPEIIERGHIFIAQPPLYKVQKGRQERYLKDEE
AMSKYQISIAVGSSRFYINPDTPPLKGKILEQLVFEYYLIQKIIVRMEHQ
FPKILLNRLIYHSVLSEEQCYCYESVKIWMRSLVDSLSSFEEYGSSYDFV
ILKHHENEYFEPILRIRTYGINIDYVLSIDFIKSHEYKKLVSFGMQMNEL
FLSDAYIEYGIYRKQVHSFDQAMEWLMQESRKGLVIQRYKGLGEMNPDQL
WETTMNPKNRCMLRVTIKDAIEADHLFTTLMGDLVEPRRAFIEKNALKAT
NVDY
>BPEN_319 holA, DNA polymerase III, delta subunit
MIWIYPEQLCIELKKELRSVYVLLGNDSYFLGDSYLNIVNTARMLNFNES
VNIALDMYSDWENICNLFRVSSLFEKRRILSLKFPQNYPVAILKKKVPLL
FSFLHDDLVLILYIHESNQINKNNIWLQCFKKIGIFVDCSTPTHTRLIMW
IENQAKNMKLVIENLACQLLCYYYEGNLTLLNQTLRNLSLIYPDGNLNFI
RVKKIVTDSACFNMNHWIESILTGNKQRADRILKKLEYIGVDLELLLCRI
KSEILMITNMKYNMVQGKSLFNLLKKYKIYRKYHCMLLARAVNRLSLYQL
YQAIELLAQIELIYKKDYIVLSRSSFELLSLILCYDKKVSLK
>BPEN_412 holB, DNA polymerase III, delta prime subunit
MRWYPWLDSTYNQILNAYRQDRGHHALLLNSKRNNGENTLIYAIARWLIC
SHPDANQCCNICYDCRLMNVGHHPDYYEISPENNTQTIGVDTIRACINSL
HKYAYQSKVKIIYIEYVECLTDQAVNVLLKTLDEPPTNTYFFFKTRDYMR
ISLTLLSRCMRWPIISPKESIGLQWLMKNREEINDILLAQCALRLCDGSP
IEAEDMFKLGLWKQRLELCKCINYVIANGDFLKLVPFLNICKNDIYLYWF
ITVLVDALKWKQGIKKRFLINLDQVDLITVITVHWGIVSLSRQLQQWLVL
LRYFQEFTNIDRELLLTYRLLNWQQDIVESCLH
>BPEN_034 holC, DNA polymerase III, chi subunit
MKRSIFYLLSQEFEQKNRPNYIEQLACKLISTQWRSGKTILVTCENEHQA
TKIDKILWTFDQNSFVPHNLFGKTIQHAPIVIYWSQCCYDNQPKDLLINL
MLKNMNFFLNFNEIIDFVPISDILKKWARYRYRSYKRNGFQVSVVNTPTE
>BPEN_114 holD, DNA polymerase III, psi subunit
MLTNNRNKPHTFIFQELGITLWKLRYPVVLDSINPIKLWPSLRLVLISPD
VPISLNDPFIKDVIRAMQINPREVCALTTNQIKILIIPSEFSYYCWWIGT
KVSNNLNSICLTTPALSILKCDIHAKRDLWRQISDIRLNI
>BPEN_524 ligA, DNA ligase
MKFVKQKIQKLRKKLRHWEYLYYTKNESAVSDEKYDAMLEKLNQLEQIYP
HLIAESSPTQRIGGVSQYNFKKIHHKVPMLSLNSIVASFQLLSFDKRIKI
KLHANHVMSYCCELKIDGVAVSLLYKEGKLIYAATRGDGKIGEDVTENIS
TIRAVPMCLKIDSNKYGKLPYLLEIRGEVFISKLCFLELNKITIQQGNKP
FSNARNAASGSLRQLDPSVTATRPLSFYCYGISNYCGEKELPDSHWERLQ
LCENWGLPINNYIRLISGVNKVLEYYSYIKTIRSNLEFNIDGIVIKVNSC
AYQSKLGCGSRAPHWALAYKFPSEVSSAKVDNVIFQVGRTGIITPIAYLE
PIVISDVTIRKVNMHNINEVKRLGLMIGDTVRIQRSGDVIPKIVEVILSE
RTDHVKTIELPRFCPVCGSRIKTWRNQSILRCTAGLSCLAQRKATLEHFV
SKKAMNIYGMGNKIIDQLVNQGLIFTSSDVFRLNKNKLLCLEGFGLENIE
RLLRSIEDSKKITLARFIYALGIYGVGETVASNLAIVYKTIENLAAADLQ
SLSNLKYVGPIIANNIYHFFRNPDNLKNVQDLIDPAIGIQLYVIT
>BPEN_256 mutY, adenine DNA glycosylase
MAQDIIFSKKMLLWYHKYRTQDFPWQLNKTMYKTWLSEIMLQQTQVKTVI
FYYERFISKFPTIKQLATAELDEVLFLWSGLGYYVRARNLHKTAKIIVNH
YHGNFPKDFDTLVSFPGIGKSTAGAILSLTLDQHYPILDSNVKRILIRYY
ALDYSLSRNSSEVNNKLWLLIKQLLPNIGVADFNQAMMDLGRLICTSTYP
LCNDCPLREGCRSFLNHCVDQYPRKKLKKKLIKKTIWFLLLLSQQYQMKM
IWLEKRSYQGIWGGLFCFPEFSTLKILNTWLLHYNLHNNQRMNLDILKHK
LSNIDLEIKPILLNTHKKLNYKKDGIWYDLMHPPVIGLPKPISIILQKL
>BPEN_383 nth, endonuclease III
MNRVKRYQILCKLRDNNIRPVIELVYRSEFELLIAVLLSAQTSDVQVNKV
TTSLFKVVNTPQDMLRLGVDGVKNYIKSIGLSNIKSKNIIETCRLLIDKY
NGILPSNRVGLESLPGVGRKTANIILNVVFDWPTIAVDTHVFRFCNRSRF
ALGNTVLSVEKKLLSVVPKEFQRNCHQWLVLHGRHVCRARQPNCRVCVIK
DLCEFKEKKRFIL
>BPEN_645 polA, DNA polymerase I
MITIINNPIILVDGSCYIHRAYHAFPELITSDGKPVWVIYGVINMIKSLL
IRYQPTHMVVVFDAMGKTFRNNLFEKYKANRMKTPKHLYTQIDPLCEIIQ
AMGLSILKVPDVEADDVIGTLAISCARSGNSVLISTGDKDMAQIVSSQIT
LINTMSNIIFTPKEVEKQFGVPPTLIADYLALIGDRSDNIPGVPGIGKKT
AQILLNKIGNLKLLYDHLDKISLLNLGLRGARAIQNTLQANKEVAFLSYK
LTTIKTDVSLNISDYQLLIQQLNINTLQLLFTEYEFKNWLIDLQSGTWLN
KYHHLKHVPSHRRLNNTLLFQKNNLLSDYSKEKKIIKIICNTEMLFNWIE
KIDESKFFIFSIHTDVFNVATANIISICLSIDTKESAYIPIKTDSINNHQ
NFLYLEEILSILQPTLENEKIKKVGQHLKFSYSILKRYNINLAGMAFDVI
LELYILYGTANYHDIKNFLDKDTFNVVTNFKKNYDNYNENNILSDLQNIQ
LQSLYAAKFIKSLFNLHHTLWPKIEANNKLKKIFEEVEMPLISILSRIEN
YGVLIDKKLLNTHAVELDYRLHALELEAYQLVGTPFNLASTKQLQEILYN
QQKLPILKKTPKGAPSTNEEVLKKLSKKYSMPRIILQYRALSKLQSTYIN
KLIAMINKKSNRVHTSYNQTRTSTGRLSSTSPNLQNIPNRNYDGRKIRQA
FIAPKNFLIVAADYSQIELRIMAHLSQDIELINDFLSEKDIHTATASEIF
VTALHLVTDEQRQRAKTINFGLIYGMSAFGLARQLSVTCKEAQKYVDRYF
NRYPGVMKYMQHIREHANKYGYVSTLDGRRLYLPDIYSANILQKKGAERA
AINAPMQGSAADIIKKAMISIDNWLQKDEIPARIIMQVHDELVFEVHNDI
VDPVVKKIKKLMEECFIMDVPLKVDVGIGKNWEQAH
>BPEN_276 recB, exonuclease V
MRNLNVLELPLYGINLIEASAGTGKTYTLIIIYIRLLLCLGNRSDFSRPL
TVKEILVVTFTKSAVRELRHRIRENIHQFRLDCMRGYSHNFLFSKLLLQI
HNVELAINQLSEAEKKINQASIFTIHSFCQNILNHNTIELNMLFNTNIVD
NETILYQQACTDFWRRNFYSLPLNIARLIQEYWKDPNSLLNDIIPYIYRA
RSNLDCYNHNVHEDKKSIITYYEKILDHVNHVKKEWLKNKHNIITILNSY
DINRRIYNKSNLIRWIDRINQWVKRPTIDHTTPNDLQRFRTTELKIHNNS
NKSDYICTLFDSVEKLYSQLSSFKTSIFKIAINEIHNDLNNTQHYRSEIT
LNDLVDVLAHHLVKDKDNKLAHILRTRYPVTLIDEFQDTDCQQFKIFSTL
YNSDSENGLILIGDPKQSIYAFRGADIFSYMKIRRTVCNKYNLNINWRSS
LNIVNAVNQLFQLVSNPFIFEDIPFIPSVTASRNSMYRFLINNQSQTAMC
FWLHPDEIVTIGDYKRSMAQECATILYNLLHEIRNGTAWLENDKYKRKLE
ISDITVLVRNHEEASLICSALSKVNISTVFLSNHKNIFETMESYELSLLL
RAILFPESHTICTALTTVFFGLNATDIESINNNESKQERIFEKFFEYYSV
WKKKGVYLMIQKVIFDHKVPEKLLSTRVGESSLINILHLGELLQDAARQL
QDEHALMEWLILKITQPKNKKTSDQNLRLGSDHQLIKISTIHKSKGLEFP
LIFLPFIADFNYVKNPFFHDRKSYKTHLNFNTSKSHLTLADEERLSEDLR
LLYVAVTRSIYHCSIGIGPIVRRYKKKSNTNNDLHHSALGYLIQKKTSGN
AATLKKHLKKLSVYSNGDISFRIISKSQELFSHASSVASNQLLCGKKWKT
SPNVIPWSITSFSALQHTDVGVTTYLNLEKQLDISEHIQSQENEIPLTPH
TFPKGKVCGSFFHSIFQVLDFRKLVDMKWLYAHMERYNIDPIWGFVVREW
IYIVLNTPLNNNLTLAQIIPENKKTELKFYLSINTYLTSEELDHLCKKYD
PVSRKSSSLTFLDITGMLKGFIDLIFRWNHRYYLLDYKTNWLGDNNKDYV
GSKIRQEMIKHHYALQYQLYTLALHRFLRNRLVSYNYEKDFGGVYYLFIR
GMDGTPLSNGIYFFRPLSTFINKLDNLFSKNNLNIIK
>BPEN_274 recC, exonuclease V, gamma chain
MFTIYHSNQSNSFRNLLINTMSDKSLPDPMQSEIILTEHSIMDQWIQIEI
ANHFGIACNIKFMTLMSFMQYMSNKIEPNNFIANNFSRSIMYWKFMKILS
QTQISKKCSIIHKYLCGDVNQQKIGQFSEQLSNLFIQYLIYRPDWLNNWE
SNKIINYLDDTHQTWQSKIWRMFLENIRCNQKELKGNIYPLQRCIDFLKN
TQKIIFNYLPSRIFIFGISSIPPIYWNILKLLSYHIDIYLWFINPCSHNL
IYISDQNSYDVTQKENQLYNKNVLRSSSSVAVHFSNHNDYSNINHPLLDA
WGDVAYDTLSLFTQLKDKIELKSFIIPKQNSLLHIVQKNILEFQNHIKNI
KKQPDTTTSTNNQRHILLLEDQSITCHVCHSIQREVEVLHDNLLSMMTDD
PSLSPGDIIVMAYDIRCYKSAIQTIFDNIQDRHLPFNIAIDNYKKNTHPI
ISTFINILNIPYSRFTAEEIFSFLTVPSIASRFKMNKEEVKLLHQWIIKS
GIRWGLDDYTMYNFSLPIINQNTWNFGLNRMLLGYAIKNQHDTWEKIFPY
DDIIIRDHINIIGQLGEFLKTLKKWRDRFGHSYTLVEWISYFKEIIDDFF
HCDHMDSENKTVLLFLKNCYRDILESGIQAEYTQTISITALRDKLCRKLT
QDTVIPRFIPNVINFCNITPTFCIPHKVVCFLGMNDNKFPRNKISPDFNL
MVKNPRRNDDNIHEKDCYSFLIAFLLAQEKIYISFIGHSIYDNSMSYPSV
LVNELLEYIALNFYSKEHENIDIDINIKHIRQRLCQWYPPFPFSPENFNP
NNNKRSFAKEWLPTKNINVNHSLLIYPNFNAPFSHDLAKTIIFQDLYNFY
RHPVRIWFQKRLNVYFDQNILKLSNDEPFSVDGLNRYELNMQLIDYLIHS
KNTDELYHSMRASGILPYGVFGKLYWTKQQKKMTILANQIKTYHCIEKHN
LDISLTFDTTRLVGQLTAVQENGLTRWKSRYLSMKDVLLLWLEHITYCAI
GGKGDSRLFGINDAWHFPNLSKLHAKKLLFTLISDYHKGTNTPILLLYQS
GGAWMNHVFDWNTRTISSNPYCQKEAHRKLIQVWQGTKYSLFRESHDPYL
RKLISFDLSEENISKIIKTAEHYFFNPMKYRII
>BPEN_275 recD, exonuclease V, alpha chain
MKDVINNILKLGLWHSLDVQFADVLALPIYDGNRHNNIKEALILASATLS
SKVRDGHVCLPLRCLTPDKLFQGNYPELTYAIYRKLGKLSISSWQELLFS
CPAVSDGSRVTPLILENKRLYLHHMWQDECIVAQFFNHKYPSNVFQKEKI
IYALNQLFPITYTEVDWHKIATAIGVTHHRVLISGGPGTGKTSIIAKIVA
TLLLCSKNNDLNIQITAPTGKATALLTESFRTTIHNIPQLEKLLLCNLPE
KATTLHSLLRTRLYKENIQYNCFNLTRLDLLIIDEASMVSLSMLAQLILM
LSPQTKVIFLGDQYQLCSVEPGSVFKDVCQFSNFYYSRKRYQELIDLTGY
ILPIISPSKSSMHYNYNSIIDGTCILKKNYRFSESSGINKLSGAINSGDY
NHALSLLKSSIYKDLCYIYFVDKKSYITMILNCAMAYSNYLQKLKYTKIL
TENILKIFNHYRILCALRDGPFGVIRLNYYIEQILNEKGLIQLNNSRNYL
GRPIIILRNKPSLELYNGDVGVLLLNDQNKLSAYFILPRGSIKVIQINQL
PEHETCFAMTIHKAQGSEFQHTAIVLPNKYIPLLTRELLYTAVTRARQCL
YLYATDHVIIRSVNSITQRYSGLYEKIKNHIIPMA
>BPEN_231 rnhA, ribonuclease H
MYKKIEIFTDGSCLGNPGPGGCAAILRYKQHKKEFSIGYRLTTNNRMELM
AAIIALESLKNPCQIILNTDSQYLLHGITQWIHIWKKHHWKTSEEKLVKN
IDLWQRLDVAIQIHSIIHWNWLKSHTGHPDNERCDQLARLAAKCPINEDF
Y
>BPEN_293 rnhB, ribonuclease HII
MTTMLSIVQVKNNEIPKTLSIKKFKLIAGVDESGCGSLVGSVIAAAVILH
SIQPISGLADSKTLNKNKRLNLYKNIIKNALAWSIGYADVTEIDRSNILE
ARLLAMKRAVHNLSVKPDLILIDGNRSPGFTEIPYQCFNKGDARIAIISA
ASIIAKVTRDQDMIILDKQYPKYGFAQNKGYPTFFHLKQLALYGPISQHR
KSFAPVKHVISDINRKL
>BPEN_379 rnt, ribonuclease T
MICKDDHSTLRARFRGFYPVVVDVETAGLDANINALLEIAVATFKMDEYG
WLCVDGSLNFHIKSFPGAIIQPESLAFNGIDLNSPLRAAVTEQEALHEIF
EMVRQGIKTQGCSRAIIVAHNAFFDHSFLMAAVERVSFMEKNPFHPFVMF
DTATLSGLVFGQTVLAKACACAGVFFDKNKAHSALYDTERTAMLFCELVN
KWKRLGGWPLTPCCIES
>BPEN_476 sbcB, exonuclease I
MLTHINVSQPSFFIYDYETFGINPALDRPAQFAGIRTNNTLKPIEKEKIF
FCRLSNDYLPDPQSVLITGIAPQDTLRHGLIESEFARRIHQLFCIPKTCI
LGYNNIHFDDEFSRNIFYRNFHDPYLWAYQRGNSRWDLLHVLRACYSLCP
NGITWPLNIQNKPSFRLKDLTQANAIKHLSAHDAMSDVYATLELTKLIKE
AQPQLFQFLFDHRTKYQLQKIIDLDTMNPLIFIMNKINNKYKNFITYIAP
ISRHPINPNILIACDLNGNIDNLVNLNINTIYQKLYSNHITIYDILKKIP
LRFIRLNACPILIPINFFEKNNINTTYTMQLSTNYRYCLKNLNFIRMHEN
SVYLRNKINTLYTIIGSYINQKNIYNNLHVDSQLYHRLFNNSDRKIIESI
RRTHSKELKNLCTDHVDTRLKPLLFYYRARNFPNTLNYQEQKKWLNYKKN
KLFNTDQSKSYNDKLNQLLSIYKYNDQKITLLHSLQKYYQYLYEVHFNFY
>BPEN_028 ssb, ssDNA-binding protein controls activity of RecBCD nuclease
MNGGVVANRGINKVILIGYLGQEPAVRYMSSGSMVTNISVATTESWKDKQ
TNEFKEKTEWHRVVLFGKLAEIASEYLHKGSQVYIEGSLKTRKWQNQNGQ
DRYITEIIVNIGGAMQMLGSRHSGENVSLDNQNVMNSGDKTISNDVSVGD
PADVNFDDEDIPF
>BPEN_563 ung, uracil-DNA glycosylase
MPQKLNWRFLLSKEKTLPYFQNILFAIEERKKKGITIYPKKKDVFNAFRF
TSFESIKVVIIGQDPYHGPNQAHGFAFSVLPGVLPPPSLKNIYKELASDM
PDFVIPEHGCLESWAQEGVLLLNSILTVEEGRSCSHADIGWERFTDKIIS
ILNTHKEKIIFLLWGKYAQNKGNIINHKKHYIFTASHPSPISAQRGFLGC
HHFSKVNILLAQQNKQIINWQPKIIDSKLI
>BPEN_449 xthA, exonuclease III
MKFVSFNINGLRARMHQLNAIIFQLKPDVIGLQETRVHDDFFPVKEILQH
GYHVYYYGQKKYHGVALFLRQTPLTVTRGLTDDDNLSQKRIIMADIMTPI
GTLTIINGYFPQGENKNHPEKFMYKKNFYKSFQNYVEHTYHSHSLLLIMG
DMNISPTDFDIGIGEKNKKRWIASGRCSFLPEERTWINRLMSWGLVDIYR
NMHPQNDERYSWFSYRSHGFYKNNGLRIDLILATRPLANRCKNSDISYDI
RRMQRPSDHAPVWVDFDI
>BPEN_411 ycfH, putative metallo-dependent hydrolase
MFLVDSHCHLNQLNYQDVHKNVSDVLNKAKQKGVQLVLSVSLTMSDYEDM
VKLIGYRSDVLFSCGVHPTYVYNINNFDSEKLYVLSSKRNVVAIGETGLD
YYHRLESDSKKKQKKAFREHIRVAKAAKKPIIVHSRDSCKDTVTLLRSEE
AEECGGILHCFSEDIDTARLLLDLNFYISFSGMITFTKSYMMQEVIKYIP
SDRILLETDSPYLTPVPYRGQENQPAYIYEIAKYVASIKNINIDELAVIT
TSNFRTLFHLE
>BPEN_272 ygdP, nucleotide hydrolase
MIDDNGYRLNVGIVLCNTHQQVLWARKYKQHYCWQFPQGGINIGETPEQA
MYRELFEEIGLNYQDVRILSSTQYWMHYKLPKKLIRWKIRPICFGQKQKW
FLLKLLSKDTRINIKSNKDYTFDRWKWVSLWYPIRRVVFFKRDVYRKVMQ
EFVDVIIS
>BPEN_655 yhhF, putative methyltransferase with SAM-dependent methyltransferase domain
MKNKLHLGVSRKIKIIGGKWKGRNIPITRHSKIRPTTNRMREILFSWLNP
IISRAVCLDCFAGSGALGLESLSRGANKVTFLDNNHICITALIKVMQSFS
AYNSEIIYTDCRSWLQQSTTTYNVIFLDPPFQNNIIPEVIFLLERSNLLE
KESWIYIETSKKRNIFNTSIIPNYWILYHKKITRNVMYYLFLRRS
>BPEN_257 yqgF, putative endonuclease involved in recombination
MRDVNCVGIVMGFDFGTKHIGVAIGQKLTCTAQPLTVLQSQSGVPNWKRI
RDIYNTWKPMIFVVGLPLKIDGSEQPITILAKIFAIQLKELFPVPVKMHD
ERFSTSEARLNYFKYYHDDLCARSNIKINAIAAGVILKSWLNKS