Gene list
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COG category: Replication, recombination and repair
Organism: Streptococcus pyogenes M1 GAS, SF370
Number of genes found: 118
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Streptococcus pyogenes M1 GAS, SF370 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
NA | SPy1047 | hypothetical protein | chromosome | CDS | 858863 | 870 | + | 0.355172 |
NA | SPy0130 | hypothetical protein | chromosome | CDS | 121417 | 648 | + | 0.317901 |
NA | SPy1574 | putative transposase-IS1548 | chromosome | CDS | 1296969 | 1134 | + | 0.381834 |
NA | SPy0971 | putative terminase, small subunit-phage associated | chromosome | CDS | 794673 | 483 | + | 0.393375 |
NA | SPy0550 | hypothetical protein | chromosome | CDS | 448362 | 315 | + | 0.380952 |
NA | SPy0477 | conserved hypothetical protein | chromosome | CDS | 390236 | 477 | + | 0.412998 |
NA | SPy0679 | conserved hypothetical protein, phage associated | chromosome | CDS | 545087 | 1167 | + | 0.372751 |
NA | SPy1807 | putative transposase-IS1548 | chromosome | CDS | 1499197 | 1134 | - | 0.380952 |
NA | SPy0195 | conserved hypothetical protein | chromosome | CDS | 179046 | 294 | - | 0.37415 |
NA | SPy0444 | conserved hypothetical protein | chromosome | CDS | 368571 | 555 | + | 0.407207 |
NA | SPy2186 | hypothetical protein | chromosome | CDS | 1820109 | 318 | - | 0.349057 |
NA | SPy0732 | conserved hypothetical protein | chromosome | CDS | 588374 | 591 | - | 0.402707 |
NA | SPy2013 | transposase-IS1562 | chromosome | CDS | 1680888 | 1206 | + | 0.440298 |
NA | SPy0199 | conserved hypothetical protein, IS861 associated | chromosome | CDS | 182950 | 516 | - | 0.366279 |
NA | SPy1841 | putative ribonuclease HIII | chromosome | CDS | 1526806 | 903 | + | 0.369878 |
NA | SPy0303 | putative transposase, IS1548 | chromosome | CDS | 270848 | 1134 | + | 0.382716 |
NA | SPy0683 | putative minor capsid protein, phage associated | chromosome | CDS | 549887 | 1494 | + | 0.395582 |
NA | SPy1563 | conserved hypothetical protein | chromosome | CDS | 1285211 | 675 | - | 0.398519 |
NA | SPy1412 | conserved hypothetical protein | chromosome | CDS | 1171471 | 279 | + | 0.362007 |
NA | SPy1477 | putative recombinase-phage associated | chromosome | CDS | 1215998 | 990 | - | 0.39899 |
NA | SPy0669 | putative DEAD box family helicase, phage associated | chromosome | CDS | 537571 | 1584 | + | 0.410985 |
NA | SPy2170 | hypothetical protein | chromosome | CDS | 1805181 | 642 | - | 0.389408 |
NA | SPy1844 | putative exodeoxyribonuclease V (alpha subunit) | chromosome | CDS | 1528370 | 2454 | + | 0.41524 |
NA | SPy2180 | putative transposase | chromosome | CDS | 1812120 | 1134 | - | 0.381834 |
NA | SPy0108 | conserved hypothetical protein | chromosome | CDS | 105209 | 954 | + | 0.383648 |
NA | SPy0131 | conserved hypothetical protein | chromosome | CDS | 122251 | 1353 | - | 0.423503 |
NA | SPy1992 | conserved hypothetical protein | chromosome | CDS | 1662171 | 1269 | + | 0.43026 |
NA | SPy0472 | conserved hypothetical protein | chromosome | CDS | 387581 | 576 | + | 0.421875 |
NA | SPy1335 | conserved hypothetical protein-transposon IS861 associated | chromosome | CDS | 1106787 | 516 | + | 0.366279 |
NA | SPy1659 | putative ATP-dependent RNA helicase | chromosome | CDS | 1378395 | 1344 | - | 0.419643 |
NA | SPy0365 | hypothetical protein (possible integrase/recombinase) | chromosome | CDS | 315251 | 747 | + | 0.327979 |
NA | SPy0133 | conserved hypothetical protein | chromosome | CDS | 123814 | 351 | - | 0.407407 |
NA | SPy1077 | putative methyl transferase | chromosome | CDS | 884567 | 324 | + | 0.41358 |
NA | SPy1196 | putative integrase/recombinase | chromosome | CDS | 980732 | 1071 | - | 0.379085 |
NA | SPy0339 | hypothetical protein | chromosome | CDS | 294722 | 1176 | + | 0.370748 |
NA | SPy0671 | hypothetical protein, phage associated | chromosome | CDS | 539783 | 2274 | + | 0.394899 |
NA | SPy1564 | conserved hypothetical protein | chromosome | CDS | 1285887 | 849 | - | 0.380448 |
NA | SPy1561 | conserved hypothetical protein | chromosome | CDS | 1283885 | 294 | - | 0.391156 |
NA | SPy1336 | putative transposase-IS861 associated | chromosome | CDS | 1107323 | 807 | + | 0.400248 |
NA | SPy0261 | conserved hypothetical protein | chromosome | CDS | 225608 | 570 | + | 0.44386 |
NA | SPy1830 | putative single strand binding protein-phage associated ? | chromosome | CDS | 1519100 | 492 | - | 0.426829 |
NA | SPy0928 | conserved hypothetical protein | chromosome | CDS | 771726 | 684 | + | 0.355263 |
NA | SPy0673 | conserved hypothetical protein, phage associated | chromosome | CDS | 542545 | 396 | + | 0.419192 |
NA | SPy1054 | putative collagen-like protein | chromosome | CDS | 863979 | 882 | + | 0.469388 |
NA | SPy1538 | conserved hypothetical protein | chromosome | CDS | 1265912 | 540 | - | 0.37963 |
NA | SPy0948 | conserved hypothetical protein-phage associated | chromosome | CDS | 784595 | 807 | - | 0.369269 |
NA | SPy0260 | conserved hypothetical protein | chromosome | CDS | 224791 | 825 | + | 0.425455 |
NA | SPy2145 | hypothetical protein-phage associated | chromosome | CDS | 1785275 | 384 | + | 0.377604 |
NA | SPy1644 | conserved hypothetical protein | chromosome | CDS | 1363963 | 1155 | - | 0.393939 |
NA | SPy2113 | conserved hypothetical protein | chromosome | CDS | 1764930 | 420 | - | 0.37619 |
NA | SPy0021 | conserved hypothetical protein | chromosome | CDS | 33143 | 756 | + | 0.313492 |
NA | SPy0400 | putative DNA polymerase III delta' subunit | chromosome | CDS | 337062 | 876 | + | 0.391553 |
NA | SPy1562 | conserved hypothetical protein | chromosome | CDS | 1284189 | 1026 | - | 0.380117 |
NA | SPy0198 | putative transposase, IS861 | chromosome | CDS | 182123 | 807 | - | 0.395291 |
NA | SPy1160 | hypothetical protein | chromosome | CDS | 953429 | 441 | - | 0.376417 |
comEA | SPy1409 | putative competence protein | chromosome | CDS | 1168985 | 663 | - | 0.374057 |
comFA | SPy1616 | putative late competence protein required for DNA uptake | chromosome | CDS | 1338335 | 1326 | - | 0.362745 |
deaD | SPy1415 | putative ATP-dependent RNA helicase | chromosome | CDS | 1173901 | 1620 | - | 0.418519 |
deaD2 | SPy1369 | putative RNA helicase | chromosome | CDS | 1135100 | 1086 | + | 0.388582 |
dinG | SPy0649 | putative ATP-dependent DNA helicase | chromosome | CDS | 520872 | 2502 | + | 0.381295 |
dinP | SPy1846 | putative DNA-damage-inducible protein P | chromosome | CDS | 1531489 | 1095 | - | 0.415525 |
dnaA | SPy0002 | Chromosomal initiator protein | chromosome | CDS | 232 | 1356 | + | 0.334071 |
dnaE | SPy1284 | putative DNA polymerase III (alpha subunit) | chromosome | CDS | 1059037 | 3111 | - | 0.376728 |
dnaG | SPy0781 | putative DNA primase | chromosome | CDS | 640206 | 1815 | + | 0.385675 |
dnaI | SPy0340 | putative primosome component (helicase loader) | chromosome | CDS | 295898 | 903 | + | 0.414175 |
dnaN | SPy0003 | beta subunit of DNA polymerase III | chromosome | CDS | 1742 | 1137 | + | 0.331574 |
dnaQ | SPy1864 | putative DNA polymerase III epsilon subunit | chromosome | CDS | 1546470 | 627 | - | 0.395534 |
dnaX | SPy1364 | DNA polymerase III subunits gamma / tau | chromosome | CDS | 1130859 | 1671 | - | 0.405745 |
exoA | SPy0412 | putative 3'-exo-deoxyribonuclease | chromosome | CDS | 341615 | 828 | - | 0.427536 |
fpg | SPy0497 | putative formamidopyrimidine-DNA glycosylase | chromosome | CDS | 398928 | 828 | + | 0.423913 |
gyrA | SPy1152 | DNA gyrase A subunit | chromosome | CDS | 946971 | 2487 | + | 0.40008 |
gyrB | SPy0727 | putative DNA gyrase, subunit B | chromosome | CDS | 581680 | 1953 | + | 0.399386 |
hlpA | SPy1489 | histone-like DNA-binding protein | chromosome | CDS | 1222637 | 276 | - | 0.405797 |
holA | SPy1407 | DNA polymerase III delta subunit | chromosome | CDS | 1165650 | 1041 | - | 0.367915 |
holB | SPy2182 | DNA polymerase III delta prime subunit | chromosome | CDS | 1814174 | 1368 | - | 0.390351 |
int1 | SPy0655 | putative integrase; bacteriophage 370.1 | chromosome | CDS | 529631 | 1416 | - | 0.321328 |
int2 | SPy1488 | putative integrase-phage associated | chromosome | CDS | 1221407 | 1143 | + | 0.356955 |
int3 | SPy0937 | putative integrase-phage associated | chromosome | CDS | 778642 | 1140 | - | 0.389474 |
int4 | SPy2122 | putative integrase-phage associated | chromosome | CDS | 1773458 | 1146 | - | 0.359511 |
lig | SPy0751 | putative DNA ligase | chromosome | CDS | 611246 | 1959 | + | 0.405309 |
mutL | SPy2121 | putative DNA mismatch repair protein | chromosome | CDS | 1771381 | 1983 | - | 0.395865 |
mutS | SPy2148 | putative DNA mismatch repair protein | chromosome | CDS | 1787021 | 2556 | - | 0.402582 |
mutS2 | SPy1837 | putative DNA mismatch repair protein | chromosome | CDS | 1523305 | 2340 | - | 0.367949 |
mutT | SPy1510 | putative mutator protein | chromosome | CDS | 1241086 | 456 | + | 0.392544 |
mutX | SPy1010 | putative 7,8-dihydro-8-oxoguanine-triphosphatase | chromosome | CDS | 821203 | 477 | + | 0.392034 |
mutY | SPy1833 | putative A/G-specific adenine glycosylase | chromosome | CDS | 1520567 | 1125 | + | 0.385778 |
nth | SPy0929 | putative endonuclease III (DNA repair) | chromosome | CDS | 772406 | 657 | + | 0.400304 |
parC | SPy0910 | putative DNA topoisomerase IV (subunit C) | chromosome | CDS | 754392 | 2460 | + | 0.402439 |
parE | SPy0909 | putative DNA topoisomerase IV (subunit B) | chromosome | CDS | 752349 | 1953 | + | 0.416795 |
pcrA | SPy1267 | putative ATP-dependent DNA helicase | chromosome | CDS | 1043809 | 2319 | - | 0.410953 |
phr | SPy1505 | putative deoxyribodipyrimidine photolyase | chromosome | CDS | 1235043 | 1410 | - | 0.37234 |
polA | SPy0185 | DNA-directed DNA polymerase I | chromosome | CDS | 171524 | 2643 | + | 0.423383 |
polC | SPy1961 | DNA polymerase III (alpha subunit) | chromosome | CDS | 1628382 | 4398 | - | 0.434516 |
priA | SPy1629 | putative primosomal replication factor Y | chromosome | CDS | 1350681 | 2385 | - | 0.386583 |
radC | SPy1118 | putative DNA repair protein | chromosome | CDS | 916003 | 681 | + | 0.321586 |
recA | SPy2116 | recombination protein | chromosome | CDS | 1766417 | 1137 | - | 0.407212 |
recF | SPy2204 | RecF protein | chromosome | CDS | 1836947 | 1107 | + | 0.372177 |
recG | SPy1785 | putative ATP-dependent DNA helicase | chromosome | CDS | 1476761 | 2016 | - | 0.369544 |
recN | SPy1495 | putative DNA repair and genetic recombination protein | chromosome | CDS | 1226591 | 1662 | - | 0.394103 |
recR | SPy1422 | putative recombination protein | chromosome | CDS | 1181123 | 597 | - | 0.40871 |
rexA | SPy0777 | putative ATP-dependent exonuclease, subunit A | chromosome | CDS | 634684 | 3633 | + | 0.364437 |
rexB | SPy0776 | putative ATP-dependent exonuclease, subunit B | chromosome | CDS | 631472 | 3216 | + | 0.349502 |
rnh | SPy1162 | putative ribonuclease HII | chromosome | CDS | 954926 | 792 | + | 0.405303 |
ruvA | SPy2119 | putative Holiday junction DNA helicase | chromosome | CDS | 1769552 | 597 | - | 0.39866 |
ruvB | SPy0038 | putative Holliday junction DNA helicase, subunit B | chromosome | CDS | 53843 | 999 | + | 0.396396 |
smf | SPy1163 | putative DNA processing protein (Smf family) | chromosome | CDS | 955782 | 837 | + | 0.391876 |
snf | SPy0342 | putative SNF helicase | chromosome | CDS | 298380 | 3099 | + | 0.364634 |
srtI | SPy1080 | protein involved in lantibiotic (srt) production | chromosome | CDS | 885728 | 648 | + | 0.348765 |
tag | SPy2118 | putative 3-methyl-adenine DNA glycosylase I, constitutive | chromosome | CDS | 1768982 | 561 | - | 0.392157 |
tnpA | SPy0565 | transposase | chromosome | CDS | 455717 | 1038 | - | 0.354528 |
topA | SPy1164 | putative DNA topoisomerase I | chromosome | CDS | 956725 | 2130 | + | 0.381221 |
trcF | SPy0008 | putative transcription-repair coupling factor | chromosome | CDS | 5237 | 3504 | + | 0.353881 |
ung | SPy0905 | putative uracil DNA glycosylase | chromosome | CDS | 749465 | 654 | + | 0.422018 |
uvrA | SPy1825 | putative excinuclease ABC (subunit A) | chromosome | CDS | 1513799 | 2829 | - | 0.428066 |
uvrB | SPy1314 | putative excinuclease ABC (subunit B) | chromosome | CDS | 1091221 | 1992 | - | 0.393072 |
uvrC | SPy1068 | excinuclease ABC (subunit C) | chromosome | CDS | 876670 | 1797 | + | 0.374513 |
xseA | SPy1500 | putative exodeoxyribonuclease VII (large subunit) | chromosome | CDS | 1230616 | 1341 | - | 0.423564 |
xseB | SPy1499 | exodeoxyribonuclease VII (small subunit) | chromosome | CDS | 1230423 | 216 | - | 0.347222 |