Show UniProt / TrEMBL protein name		View in Fasta format (DNA)		View as list

# Yersinia pseudotuberculosis IP 32953, IP 32953

>YPTB1783 conserved hypothetical protein
MQIINVQQGTQEWHTLRSRHFTASEAPVMMATSSKMRRDELLNMKATGSE
REISDWVQTNLFDKGHAQEATARVIVESIIGTELFPATAIDDDGYLLASF
DGMTMMEDVLFEHKMWNATLAQAVADKDLPPEYYWQLEQQLAVSDAEKII
FVVSDGTKENFVWMEYLPVRGRRKELMAGWQQFEQDLNGYTAPEIKDIPQ
GKALMRLPALLVEIEGAVKESNLAVYQNQALAFIQSINTNLVTDQDFADA
EETVKFCEKAEKELDLIKQQALSKTEQIDLLFRTIDTLRDEMRNKRLDLS
KLVKLRKEAIRLEILNKAKTALAEHISSINKQLAIVTLPTIPADFATAIK
GKKTLTSLQSAANDELARAKIAANQVSEKYQANLTLFTDIEPAYKNLFAD
INQIIGLEHEHLALMIEQRITRQKQIEEQQRQQAEQQQEELKKRQLAAAA
VTTEIVAVSTATTAHQPLHPAGAVSFPEQLGKTTNETKIATPVDLIAQIN
ADLVTAGIDLTTETVYRLYQAVKAGRIRYFSITQ
>YPTB3209 Putative endonuclease involved in recombination.
MANRTIIAFDFGTKSIGVAIGQEVTGTARALTAFKAQDGTPDWQQVEKLL
KEWQPNLVVVGLPLNMDGTEQPLTARARRFANRLHGRFGVQIALQDERLS
TVEARANLFDRGGYRALDKGSVDAASAVIILESWFDEQAG
>YPTB3310 transposase for insertion sequence IS1661
MARSTYYYHASKPDGVIDDYADAVKAIGALSRRHAQRYGYRRMTVALRKE
GFTLNHKTVRKLMNQHGLLSLIRRKKYRSYRADGGRASDNLLARNFTSEI
SGLKWCTDVTEFRVGAQKLYLSVIQDLFNNEIISWHMSERAALILTCKTL
EKALKVKGRKEGLMLHSDQGWHYRTPMWRSMLVEAGIRQSMSRKGNCLDN
AVMENFFSHLKAEMYHRKKYDSATVLKRDIVEYIHYYNTERISLKTGGMS
PAEYRTQVEKQ
>pYV0039 putative transposase
MPMKEIAKRVHRIYCLLKLNIRRKGKQRLPACNPSPLAVPERLNLSGSVD
FMHNAQCTMH
>YPTB3662 putative DNA-binding protein
MAYIEGVMTKKVITKDNGSCPECGSALVIRSGGHGPFLGCSHYPDCQYIR
PLKAQADGHVVKTLEGQPCPECGSDMVLRQGRFGMFIGCSQYPQCDHTEV
IDKPDETSIDCPQCGQGKLLQRKSRFGKVFHACNRYPDCQFTLNQPPIAG
KCGYCHYPLLIEKRTARGIKRICASKLCGKAVASES
>YPTB0462 conserved hypothetical protein
MFSKNFFFVSQRIVGSNAMKKEWFAAKELAGLEGLPSSPQGINLMAKREG
WEQRRRRGVQGKAVEYHIGSLPITILNSLQLREEPAQYATTRQDPLTLWV
EAYYRFTEAEREQVISFIFREGAKSLIERLEMD
>YPTB3757 putative hydrolase
MKHLQKPKILKIETVACSRLFNVEAVELEFSNGVQRIYERMRPSNREAVM
IVPVIGNDLLLIREYAVGIEEYELGFPKGLIDPGEGVLEAANRELMEEVG
YGAERFDFLAKLTMAPSYFSSKMNIVIAHGLYPQSLEGDEPEPLPQVRWP
IANMMALLNEADFREARNVSALFLAHTFLNQ
>YPTB3899 transposase for insertion sequence IS1661
MARSTYYYHASKPDGVIDDYADAVKAIGALSRRHAQRYGYRRMTVALRKE
GFTLNHKTVRKLMNQHGLLSLIQRKKYRSYRADGGRASDNLLARNFTSEI
SGLKWCTDVTEFRVGAQKLYLSVIQDLFNNEIISWHMSERAALILTCKTL
EKALKVKGRKEGLMLHSDQGWHYRTPMWRSMLVEAGIRQSMSRKGNCLDN
AVMENFFSHLKAEMYHRKKYDSATVLKRDIVEYIHYYNTERISLKTGGMS
PAEYRTQVEKQ
>YPTB0320 conserved hypothetical protein
MAFSPSIDVQYLHQLAWRPAQFAHPLWLAAVGVNPENYGYGRSRALDSAL
NGMLIQRRKFPQQRLPAVLNPRQQRQIAQRQRLPALCLALGVVSLQCDDY
LRLRRYRQVLSPLLNDDDIQQIIGMGYRGQWQASLSPQQLPDVALRLGQS
LACQVRSNNIIWQAVSILLPPNPRALCLSRSMQAQTEAWLSRLERLL
>YPTB3551 putative insecticial toxin
MQDNIDHTASVIADTDNTIHQQAKAEERHRQAVRRATQLRNDPVLSGINK
LAFSVAPKILQPEARTDLSLAEGIPERANEYADPASIQSLFSPGRYLCEL
YHVAKELHEDGNKLHIDKRRPDLQELVLSNSNMNQEVSSLEILLNVLQTK
TPLDELTKDTEAHANDSSFTLPYDDNLTVINAILEDKAISLREIAVLLTE
ESDFSPTPALVQEQLGLNPASYALIDIKSPLDESYAKRLAHATQLSVEQL
QWLNKNAIENSSNKNDPAKLEILAVISEYRRLHQRYGLSVDPFIAIINAV
NTTHTNENKTSFFQQIFSTLDVDAGFNFLDQGSWEVIIRKALGITAEELL
RIAKYCFGKSSISNVKMNSKKFSQLYRMAMIPRTLGVSFSQAEYLWQLYS
HSDENIMEKIAQGNALTIIDAIIVLENTLQWMSEQKLDITTLQAMLTKQY
STTATPELFNFLSNIYQTLGKQVYSESLKPNLYRSLANGFHLKANVVAGL
VNWLAKNDSEFTLERFWQNISMTFAEEPSLHQLEVHQPLLIQCQKLSQYV
LIAQWAELSEQEIALILLPNGIDNRGSAPSPSITLLKLLSEFKLCQQEAK
VSQSELFDIMQQLITNTNEKQEKLRNSADKVIRSIAKSIGSINNSMDDID
STISIRNGSATLFPPEHPMYKALKLEVSNLEKSKIQLEGKKKEEEIKLEQ
AKDNIQSLINNWDSEIIIRLADAYHWDINIANSMFILIFGEKINFTFHYE
NRNDYHYEEHYGYRFEQKPMYSFDKKLTNGFGSILLLKNHIYIAEKLKIH
PGTIIKIKNYIFDDKSNELENIANKLRVNL
>YPTB1808 putative transposase IS100
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPR
PAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAF
IRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRM
LYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTG
QHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMT
RLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML
ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>YPTB3419 Hypothetical protein
MTLTEEQKALFDALTQLQRRFVTALLEGANQTEAYRRAGGKARGDGERSK
ASQLVTNSNVQAFLQSVQHETVNEAIMTYTEALERLTLMGRTTIHDIATF
GNYQIGEDEEGQPVFQASWKFKDSKDIKPEHLAAVAELSTGKDGLKIKLH
DPKAAIKQLAEMCGWEAPKKAELTGPNGGPIQTSNLTPDEAAEAYRKMMG
>pYV0021 putative transposase
MHELEALLSRLKMEHLSYHVESLLEQAAKKELNYREFLCMALQQEWNGRH
QRGMESRLKQARLPWVKTLEQFDFTFQPGIDRKVVRELAGLAFVERCENV
ILLGPPGVGKTHLAVALGVKAADAGHRVLFMPLYEDITNIGVY
>YPTB0301 putative transposase (putative IS1617 trans-TRUNCATED-)
MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGV
TELRRLRQLEDENQRLKRLVADLSLDKEMLQDVIRKKF
>pYV0092 putative transposase
MNIPVHRVVRILERLSTERGYPAFIRSDNGPEFIAAALVEWAEHHGVILD
MYLFRSLSEVRTLTEDWRTNARIAHWVICHPLSMQDKNWMEILTGGGTKN
RRDYIHTGKISIPSSAIRPISARPSTPRMPLSH
>YPTB1797 putative DNA methyltransferase
MSYQIFIGDCIDSMRKMPDQSVHSCITSPPYYGLRDYGVEGQIGLEESPA
AFIQRLVAVFREVRRVLRDDGTLWVNMGDSWDKGKQLNGMPWRFAFALQN
DGWILRQDIIWHKSNPMPESVRDRCTKAHEYIFLLSKSKSYYFDHEAIRE
PSVYSGKNTGVGFGHGMDKSDRNRGRISARDNFKREDSKRAVVIPGQNVG
THRADRKDTVSDGMRAKRNVWTVATRGYKEAHFATFPPALIEPCVLAGCP
TGGVILDPFGGSGTTAGVAIGSGRKAILCELNPAYAELVPARIESILSAY
PINKGCAA
>YPTB3399 ADP-ribose pyrophosphatase
MTSKQSSPVTFDKNDVEIIARESLYRGFFSLNSYRFRHRLFNGEMSGEVK
REIFERGHAAVLLPYDPQRDEVVLVEQLRIAAIDSAVSPWLLEMVAGMIE
EGESVEEVARREAEEEAGIQVGRCKPVLSYLASPGGTSERLSIMVGEVDA
TTASGIHGLAEENEDIRVHVVSREQAYRWVEEGVIDNAASVIALQWLALH
HQALRAEWQR
>pYV0028 putative transposase remnant
MMTKHGISVEHSTLHSWVIRVVPLLHKAFCRYKCTVGRRWRMDEASKVSG
NTCTGRLILAVRLSIFC
>pYV0034 putative transposase remnant
MQSMSRRGNCLDNSPMERVFRSLKSEWLPVGGYMDVHHAVRDIGEWIQSY
YNTPPSAQWWITAL
>pYV0016 tnpA; putative transposase protein
MPVDFLTTEQEQNYGCYVAEPNDVQLVRYFHLDERDLAFIYQRRGKHNRL
GIALQLTTARFLGTFITDLTQVLPGVQHFVAVQLNIRRPEVLSRYAERDT
TRREHTAQIKEYYGYHEFGDFPWSFRLKRLLYTRAWLSNERPGLMFDFAT
AWLLQNKILLPGATTLVRLVSEIRERANQRLWKKLAAIHYLTELNGTKKR
LLDDAPEHIITGPWKRLVYDAEGRIQRAGYSLCLLERLQDALRRRDIWLK
NSDRWGDLREKLLQGEEWQAQRVLVCRALGHPTDGHKGVQQLAVQLDETW
RAVASRFEGNTEVHICNDGKYPSLTISSLEKLEEPLSLLRLNNRVRQLLP
PVDLTELLLEIDARTGFTREFTHVSESGARAQDLHISLCAVLMAEACNIG
LEPLIKHNIPALTRHRLSWMKQNYLQAETLVSANARLVDFQSTLELARRW
GGGEVASVDGMRFVTPVKTVNSGPNRKYFGSGRGITWYNFVSDQYSGFHG
IVVPGTLRDSIFVLEGLLEQQTGLNPVEIMTDTAGTSDIIFGLFWLLGYQ
FSPRLADAGEAVFWRVDKSANYGALDELARGCADLSKAENQWDEMMRTAG
SLKLGTIHASELIRSLLKSSRPSGLAQAIMAVGRVNKTLYLLNYIDDEDY
RRRILTQLNRGESRHAVARAICYGQRGEIRKRYREGQEDQLGALGLVTNA
VVLWNTLYMQEALSWMRSNGEETRDEDIARLSPLMHGHINMLGHYTFTLS
DDILNGELRALNFNLNNELSP
>YPTB3601 putative DNA-damage-inducible protein
MANAKALGLDLSTVIRMVVNRLAVNAELPIDLLQPNQETLQAIRDLENGV
EVYRVDSVDALKRDLGW
>YPTB3628 conserved hypothetical protein
MRQRLKSVLALLDNDSTEQLIHRFLTINHHRQRFSALMVSMFNASEGRLD
CYHQPDGGMNVALKLDANIEDVNHPLVRVLRNGFPEVWGSLYQGVRIEDD
DFRSFIQALPTRCGLYALPLFDVHGHACGVIAVFSENIERFADTRGIFSI
YCHIFQHRLNKLQEMDQLRSQFNQIRTVFKEQRQREKQLDELLVSLSTSD
THALPGISQDYSKIDSLTTAVETFECAVLTQRQRLYGNDKSRIAASLGLS
LRALTYKLAKYRCQL
>pYV0003 putative transposase remnant
MKRLLFHSDQGGQYRSKKSRQLLWRTGVMQSMSRRGNCLDNSPMERVFRS
LKSEWLPVGGYMDVHHAVRDIGEWGYKVITTHPHRHNGGLPPCEYEEQGK
KATKVS
>YPTB1874 putative bacteriophage integrase
MAVSKLPSGKWLCQCFPYGRDNKRIRKQFATKGEALSYERRMMVNKQDTG
LGISAVTLNELVERWYEMHGKTLSSGESRKAKLLAICERMGDPLAADVDK
NMFAVYRNAA
>YPTB3937 transposase for insertion sequence IS1661
MARSTYYYHASKPDGVIDDYADAVKAIGALSRRHAQRYGYRRMTVALRKE
GFTLNHKTVRKLMNQHGLLSLIRRKKYRSYRADGGRASDNLLARNFTSEI
SGLKWCTDVTEFRVGAQKLYLSVIQDLFNNEIISWHMSERAALILTCKTL
EKALKVKGRKEGLMLHSDQGWHYRTPMWRSMLVEAGIRQSMSRKGNCLDN
AVMENFFSHLKAEMYHRKKYDSATVLKRDIVEYIHYYNTERISLKTGGMS
PAEYRTQVEKQ
>YPTB1830 bacteriophage hypothetical protein
MGVQGLADGFLAGFNTADQAVSRNRELGLRDAAQQQQIKDSERNYGLAKD
QVDWRKETDDRDHKYKAQRDSASDEQWNKNYGLAQANQRTANASLGLRAE
EINMRKNEFNYQRSQAERQQRMQEEMPVVQTLYKQIETTGQVDPELFGQI
SKDNPLNPSRFFGQEAINNVMEINQIMPKVLSGEVSYNDPKVLKAMNTVL
APHIQRNIDEVDPESGKKIKSKELGHIGISEDGKFVIPGLKVTYSDGSTA
NKPMTQFGSADVSDNQVAKIPIDQFMNQIRGYGQMVGQLNQPDRAKFIGS
MVNPPDKAAMRQESEGYRKELLDIGKDEGKQLAALNKDGAMMDEKQLSSA
RQEIKNNSEQRRQQASELYGVGGGRSSQNQPGIDPAELEAFVGEYQKEFG
EAPDLSSPQDQQFFIAWKQKQLQQMKEHSPSAQPGTTQSNSALDSNTAQQ
LRGLKRINGSIPR
>YPTB3343 Conserved hypothetical protein
MEPTPRVKQLLIDIQEDRKRYIALEKLLIKQRELMIGHKTEALEALNPQL
TELYSVLDNTATERRLLMQQLQLPANKEGIHQLLSRLPTHYREHAGALWA
DLRLRAHACHQQNHHNGMLLTQQIALLSSLAEQPTEFLYAG
>YPTB1774 putative integrase
MAVRKLPNGKWVCDFYSDGRDSKRVRKTFVTRGEAMRFEREQLAQRGDLD
IDYTPAETAAQRLKTLVGQWYELHGRSLSDGKARLDKLNILCDNLGDPAV
ADFDREVFAKYRKQRLAGEFSRKPKHGIVKPPKEATVNREHAYLRAVFNE
LKRLGHWNHANPLDGVRLFRESENELTFLYEDDIKRLLHECDSSSNKDLG
IIVRICLATGARWSEAEQLRQAQVMPNKITYINTKSKKNRTVPISAELHK
LIPKMKGRLFANAYDAFGQAIDRAKLVLPTGQLTHVLRHTFASHFMMNGG
NILVLQQILGHSTIQMTMRYSHFAPDHLEAAVSLNPYDRIQDFKKIGRNY
I
>YPTB2480 (M29945) ORF 2; putative [Yersinia enterocolitica]
MDESIHYYNNERIKVKLNGLSPVQYRTQAMSTARESVQ
>YPTB1586 putative IS100 transposase
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEE
KLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIE
RNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQR
QGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMI
LTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKA
GVIAEANPE
>pYV0091 putative transposase
MTEYQASERRGCRIMGISRSLLHYCPNTARDIPVVEVLQKLAHQYPAYGF
GLMFNKLRQSGLPWNVKRVYRVYRLLKLNFRRKGKKRLPNRHPQPLAIPL
KMNHCWSVDFMSDALPDGRRFRLFNVVEILTGKHWQLKLT
>YPTB0562 hypothetical protein
MPKRKKSNLVKDWAFVTNIKPHELPPYSPNLNAIERLWKVMNEHTRNNRY
IEKTDDFHEAIYGSFSTTLTKIVDSLSPK
>YPTB1778 hypothetical
MSKLLNIKDQGRPGNRQVKRSLKNAARSRYHYTKEEALKAFIYRKQYQLE
RIRLTSETVSLCLKGIGEAGFVEISKDGEFNSFSNILSVPEKDFRAAEEA
GEVASTYRWGEY
>pYV0093 putative transposase
MIRQAIKKRKVFPTDDSVREVIYLAIRDASKKWSMPIQNWRLAMSRFIIE
FGDRLNDHL
>YPTB1388 conserved hypothetical protein
MYLERVEIVGFRGINRISLNLDDNTLLIGENAWGKSSLLDALTLLLSPEP
QLYHFTVQDFYYPTGDESAKERHLQVILTFCEKDIGHWHAPRYRQLAPLW
IKNNDGLHRIYYRVEGELGDDGTVCTWRTFLNLDGQPLPLHDIEKLARGV
IRIHPVLRLRDARFIRRLRRTVSEDSKAPDKVALNRQLDQLSRELVRNPQ
KLTNAELRQGVEAMRQLLEHYFAEQGSQLPGHHNNPPRPQPERAAWQALD
NINRMAAEPNSRSMRLILLGMFSTLLQAKGSLSLDPHARPLLLVEDPETR
LHPIMLSVAWGLLSQLPLQRITTTNSGELVSLVPLESICRLVRESSRVAT
YRIGPRGMSPEDSRRIAFHIRFNRPSALFARCWLLVEGETEIWLLNELAR
QCGYHFEAEGVKVIEFAQSGLRPLLKFANRMGIQWHTLTDGDDAGKKYAA
TVRNMADQGRDSERDRLTILPAPDMEHFLYRAGFDEVYHRVSAIPANAKM
QPRRVIDKAIHRTSKPDLAIEVASQAGQWGVESIPPLLKKMFSRVVWLAR
GRADE
>YPTB2464 putative deoxyribonuclease
MLLVDSHCHLDSLDYQTLHSSVDDVLAKANARDVGFILAVATTLPGFTAM
TALIGERKNVAFSCGVHPLNLDGGYDFQQLRELAAGTHVVAMGETGLDYF
YQQDNIPLQQASFREHIRIGRELNKPVIVHTRDAREDTLSILREEQAQDC
GGVLHCFTEDKATAATLLDLGFYISFSGIVTFRNAEQLRDVARYVPLDRL
LVETDSPYLAPVPHRGKENQPAYVRDVAEYMAVLKGVSLESLAEATTANF
CRLFHLDPSTLSSEKRPLP
>YPTB3886 putative integrase
MPLTDIKVKTAKPIDKAYKLTDGGGMYLLVKPNGSKYWRLKYRFVGKEKM
LSIGVYPDVSLADARQKRDEARKVLAAGGDPGEVKKADKLAQKLSSENTF
EAIAREWHKQKADRWSLRYRDEIIDTFEKDIFPYLGRRPIAEIKPMELLE
TLRRLEKRGALEKMRKVRQRCGEVFRYAIVTGRAEYNPAPDLATALATPK
KTHFPFLTAEELPYFIRDLAGYTGSVITKTATQIIMQTGVRTQELRFARW
EDIDFEKRLWEIPSEVIKMKRPHIVPLSEQVVELFQSLKPITGMYPLVFI
GRNDRAKPISKESVNQVIELLGYKGRLTGHGFRHTMSTILHEQGFNSAWI
ETQLAHVDKNAIRGTYNHAHYLEGRREMMQWYGDNLESMLNGEMILHGSF
SKSA
>YPTB1585 putative transposase
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPR
PAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAF
IRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRM
LYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTG
QHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMT
RLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML
ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>YPTB2054 putative DEAD box family helicase
MIDDFATDGALAQAIKGFNPRESQRQMAAAISEAIDAKQQLVVEAGTGTG
KTFAYLAPALRADCKVIISTGSKALQDQLYSRDLPMMVTALKYKGKLALL
KGRSNYLCLERLEQQSLAGGDLASETLVDLVRLRGWSAETVDGDISTCGQ
VAEDSFVWPLVTSTNDNCLGSDCPLYKDCFVVKARRRAMDADVVVVNHHL
FLADMVVKESGFAELIPTADVMIFDEAHQIPDIASQYFGQQLTSRQLMDL
AKDIIIAYRTEVRDSAQLQKSADRLTQSTQDFRLVLGDPGYRGNLRDVME
QPTVQRALLLLDDALELCYDVMKLSLGRSAMLDAAFERATVYRNRLKRLK
DVRTPGYSYWYECNSRHFVLALTPLSVSDRFRELIEEKPGTWIFTSATLS
VNDQLSHFTLRLGLTHAKTLLLPSPFDYANQALLCVPRNLPSANEPGAAR
KLAVLLKPLIDANQGRCFFLCTSHQMMRGLAEEFRASMTLPVLVQGETSK
GQLLAQFVAAGNALLVATSSFWEGVDVRGDALSCVIIDKLPFTSPDDPLL
KARIEDCRLRGGDPFNDVQLPDAVITLKQGVGRLIRDIDDRGVLVICDNR
LVMRPYGAMFLNSLPPAPRTRDLAKAIAFLKQRD
>YPTB2510 conserved hypothetical protein
MAMENAIHSSDLKTILHSKRSNIYYLEYCRVLVNGGRVEYVTDEGKQSLY
WNIPIANTTVIMLGTGTSVTQAAMREFARAGVLVGFCGGGGTPLFAANDV
EVNVSWLTAQSEYRPTEYLHDWVSFWFDDEKRLAAAVAFQRIRIAQIQQH
WLSSHIQRESLFPVNHDQLLFILSRFEQNLANCLTSNDLMVQEAVLTKAL
YKLAANTVNYGDFTRTKRGGGIDLANRFLDHGNYLAYGLAATATWVIGLP
HGLSVLHGKTRRGGLVFDVADLIKDALVLPQAFIAAMQGEEEQEFRQRCI
SGFQRTEALDVMIDGIKETAALCSQVPR
>YPTB3220 Conserved hypothetical protein
MAQFFGSLMLHKIKVLRTAGLALLMLTAGQAQAEYQCSVKPQDDVIISPQ
SVQIVGASGNLQISPDGDVTRNGKTLTLTDAQRQKAFRYQTALRKDLPWI
DQGAQQRLEKARVSLDKVIVQQLGSSSNVRNRLTTLSEQLKQQMARIIEK
RSDGLAFHHQAIAQVEKDGRELVQQSMGGVLQDSLNEMGVKQATSSGNNP
LQAILGNLGGLQQAIKNEWNDQEQDFQQFGREVCGRVTTLEQQRIELLKS
LG
>YPTB0186 putative transposase for IS285 insertion element
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHE
KNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRI
TQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAE
WQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGM
WLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHI
QLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAW
DDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIK
KRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSD
HL
>pYV0018 putative transposase
MKKTRYTEEQIAFALKQAETGTRVEEVCRKMGISEATFYNWKKKFGGMGV
TELRRLRQLEDENQRLKRLVADLSLDKEMLQDVIRKKF
>pYV0009 hyothetical protein
MTQPKQTKRRFSPEFKLEAIEQVVKYQRSTIEVARALELDPSQLRKWIRQ
YKEEVSGVTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAAVLMSEFP
IKSLR
>pYV0046 putative transposase remnant
MVLQSWRKKWANLSCYFRYPTTIRKVIYMTNAIESVHRLFRKLTKTKGIF
PNENSLLKSLYLGLMNAQERWTMPIQSWNLALSQLAIYFEGRLDKVITL
>YPTB1905 putative transposase (IS285)
MVLDKFAEAWDDKYPKISKIWRTHWENLNTFFGYPPDIRKAIYTTNAIES
LNSVIRQAIKKRKVFPTDDSVRKVIYLAIRDVSKKWSMPIQNWRLAMSCF
IIEFGDRLSDHL
>pYV0011 possible transposase remname
MRKWIRQYKEEVSGVTPDNPALTPEQREIQSLRAQIKRLEMEKEILKQAA
VLMSEFPIKSLR
>YPTB1776 putative integrase
MSRPRKNPADNWMPPRVRKGKSAYEFRAIDGRTIRLCNFECSQADVWVAF
EKLMINQKEDSTFTGLINEFLLSGDFCELASETQKDYHKYSSKIIAVFGK
MSPDNIRPEHIRKYMDKRGAKSRVQANREKSFMSRVFRWGYERGKVKLNP
CQGVKQFKEKVRTRYITDEEYTALYDTAPSVVKVAMELAYLCCTRQADIL
DMKKGQLLESGILIQQSKTGVAQIKAWIPRLHEVIRLASTLPLNRGVVSI
YLLHQQSGSRFTRDSFNAHWMKAKKAATMKYPELEFNFTFHDLKAKGISD
LTGSLYDKQAISGHKNASQTARYDRKINVVPVVGGQDMAK
>YPTB3309 Insertion element IS1661 DNA-binding protein.
MKHPFSTRLAAVQHYLSGKATLRETARQFSVGKSPLTRWIRAFRRQGEAG
LEHHLSRTYTPEFRLCVVRYMMANRCSAADASAHFNIPNETIIQNWMKRY
REGGKEALNPSKTGPTMPKDKYEHDSKPFSEMTHAELEKELEYLRAENAY
LKKRKALREEKALREQQKKPE
>YPTB3898 insertion element IS1661 DNA-binding protein
MIGFGCYGFTAYLASDEPTANGAISALNPRSWIFLSMIWRFGSMKHPFST
RLAAVQHYLSGKATLRETARQFSVGKSPLTRWIRAFRRQGEAGLEHHLSR
TYTPEFRLCVVRYMMANRCSAADASAHFNIPNETIIQNWMKRYREGGKEA
LNPSKTGPTMPKDKYEHDSKPFSEMTHAELEKELEYLRAENAYLKKRKAL
REEKALREQQKKPE
>YPTB0068 bifunctional regulatory protein/DNA repair protein
MNNVKDPRWAAIINRDKTADGQFVYAVKTTSIYCRPSCPSRRAKAEHIEF
FIDNTAAEQAGYRPCKRCQPTQLSRAQQQVEKISQACRLIELAETPPKLN
ELAAQLGLSTFYFHRLFKAITGLTPKGYANATRSERIRAQLSHGGSVTDA
IFEAGYNSSSRFYAQSQQLLGMTPTRYRKGGCDARLHFAVGESSLGAILV
AKSELGVCAILLGDDPVQLVQQLQDKFPQANLVGGDAEFEQWVAQVVGCV
EAPKLGLGLPLDIRGTAFQQRVWQALREIPIGETASYADIASRIGSPTAV
RAVAGACAANILAVAIPCHRVIRQDGALSGYRWGVERKRLLLERESVEKE
AEDH
>YPTB3664 conserved hypothetical protein
MLAAELWLRMTQVKGLGVVKRSALAKRLLASGDIHPGRLAAYGLDSQQCH
QFAQLSPRYIADTLEWLSDPNHHLLTYGEPGYPPRLVHIAGAPLVLFVSG
ELDVLYRPQIAMVGSRHFSHYGEQWGRYFASELARTGLVITSGLAVGIDG
ICHQAALNIQGRTIAVLGSGLENIYPQRHSRLAKEIEYQGGALVSEFLTT
ALPIAAHFPRRNRIISGLSDAVLVVEATLKSGSLITARYAMDQGRDVFAL
PGPLGSASSEGTHWLIQQGAYLATSVKDVSEQVSGSLQWLSLPEEVIISS
PKEQVELPFADVLANVGDEVTPVDVVAERAGQPVQDIASKLLELELAGWI
AAVPGGYVRIRRAGHVRRSNLLI
>YPTB2792 conserved hypothetical protein
MLLNTPAQLSLPLYLPDDETFASFYPGENPSLLAAIQSAVHQPHGSYIYF
WSREGGGRSHLLHAACAELSQQGEAVGYVPLDKRAYFIPEVLEGMEQLAL
VCIDNIECIAGDEQWEMAMFNLYNRIVETGRTRLLITGDRPPRQLNLGLP
DLASRLDWGQIYKLQPLSDDEKLQALQLRAKLRGFELPEDVGRFLLKRLD
REMRTLFMTLDQLDRASITAQRKLTIPFVKEILSL
>YPTB3467 Putative kinase protein
MANIVTCTTKDGETIQYVDEIIGSGSMKDVYFSPDKSYVVAFYKKPQNDQ
AKERIDMITGRYRQNIFEQSGGEYWKDLFCWPTHVVEHNGKIGIVVPTYQ
NHFFFKYGSKNNDFLGIKGREKEGKWFASANNQNKFLDPRERGNILNYLK
VCLLLTRAVRRMHAAGLCHSDLSYKNVLIDPEQGHACIIDVDGLVVPGKF
PPDVVGTPDFIAPEVVKTSHLLKEDPQRILPNITTDRHALSVLIYMYLFY
RHPLRGGKIHDMDDEVRDESLAMGERALFIEHPTDRSNAVKLNQVKPSSL
PWADPQKVPYTIMGPYLTQLFEKAFIDGLHDPSKRPTADEWETALVKTVD
LIQPCQNTACEQKWYVFSGKTKPVCPYCGTAFKGKLPILNLYSSRKAGSY
RPDDHRLMVWNGQSLYAWHVNRLIAPNERTSEAQKKRVGYFVFHNDQWWL
VNEGITGLMSLPDKKTIGIGEKLALTDGAQLVLSTEEGGRLVVVQLVAN
>YPTB0304 putative transposase
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPR
PAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAF
IRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRM
LYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTG
QHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMT
RLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML
ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>YPTB2603 conserved hypothetical protein
MVEQNPAAVIEWVDIVDEQNNVIAQSSRQQMRAQRLRHRATYIVVHDGMG
KILVQRRTESKDFHPGKLDATAGGVVQSGENYLESARREAEEELGIAGVP
FAEHGQFYFEEECCRVWGALFSCVSHGPFALQPEEIDEVCWMVPEEITAR
CDEFTPDSLKALSLWLTRNNEQDYGKITPREA
>YPTB2757 conserved hypothetical protein
MIIRAKEESMSVKIENIQCELLSKNWFKLHKYTFDLKTDEGTSVQQIREV
YDRGNGATILLYNRQQGTVVLIEQFRMPTYVNGNASGMLLEACAGLLDND
SPEACIRREAMEETGYQVDKVQKLFEAYMSPGGVTELVYFFAAEYHPDQK
ITDEVGVEDEVIEVVELPFHDALAMVADGRIKDGKTIMLLQYAQIHFFPS
SLTPQRC
>pYV0017 putative resolvase
MRLFGYARVSTSQQSLDIQIKTLKDAGVKANRIFTDKASGSSADREGLDL
LRMKVEEGDVILVKKLDRLGRDTVDMIQLIKEFDAQGVSIQFIDDGISTD
GEMGKMVVTILSAVAQAERQRILERTNEGREEAKLKGVKFGRKRRINRKE
LLELHEQGMGATEIAKKMNIARSTIYKVINESQ
>YPTB1708 putative DNA-3-methyladenine glycosidase
MFYTYGETEINHLKRRDKKMAAAIERLGMLERPLSPDLFAALIRNIVDQQ
ISVKAAQTVNTRLTLLLGSITPATVAAASAEAIQRCGMTMRKAGYIKGAA
DAAINGSLDLSVIAQLPDNEVITQLSRLDGVGVWTAEMLLISSLSRPDIV
SWGDLAIRRGMMNLYRHKTLPRERFERYRRRYTPYGTTASLYLWALSHKT
LED
>YPTB1286 putative bacteriophage protein GP48
MSRYSVSEYTGALQALMPMGLVWPRRPDGIQTEVLRALANAYQRSDEDAQ
DLLSAAFPATATALLPEWEATLGLPDLCAIGEIDSMIQRQRAVVAKLFGI
GGQSAAYFIRVAKALGYDITVTQYRQACAGMSVCRDALNGEEWPFTWLIT
APETTIHNAQCSLTYCSDPLRSWGNKQLECRLAVLNPSHSILKFGYTLLS
>YPTB1458 putative DNA helicase IV
MELKATSFGKHLSQHPYNRVRLLNAGIEVCGDKHQYLIPFNQLVSIQCKR
GIVWGELEFELPQQKVVRLHGTEWQETQHFYHYLLGVWQQWSEEMSQVCA
EVLHKQVESIKRIEQQDKWFKRSELGQIQVMIREAFSALPMPVERLAAFE
SCRADYECCLRWLQQGRHSVERCNQQWTARMLEEYQDFFQNVETSPLNAS
QSRAVVNGEDSVLVLAGAGSGKTSVLVARAGWLLRRNEALPEQILLLAFG
RQAADEMNSRIKQRLGVDSIQAKTFHALALHIIQQGSRKTPVISKLESDS
QARRALLIQHWQQQCSEKKAQAKGWREWLTDELEWDVADGDFWQDKRLAA
RLASRLERWVGLMRMHGGSQAEMIEQANDEVRDLFQKRIRLMAPLLKAWK
TALKDEGAVDFSGLIHQAVNLLEKGRFVSPWKHVLVDEFQDISPQRAMLL
AALRKQNKQTCLFAVGDDWQAIYRFSGAELSLTTAFSEHFGEGAECALDT
TYRFNDRIGDIANRFIQQNPYQLKKPLNSLSKGNKKSVMILPDEQLEALL
DKLSGFVKDGERILILARYHHLRPEVLQKAATRWPKLTIDFMTIHASKGQ
QADYVIIVGLHEGNDGFPAAARESVLEDVLLPPPEDFPDAEERRLLYVAI
TRAKHQVWLLQDTARPSIFVSQLSELGALVQRKP
>YPTB0964 possible DNA uptake protein ComEA related protein
MKFLGKLFAITVLLTGLNIHSFAYAAPAASTDNTQDKVSKKSPNSAADNG
AKVKGTPAQSVEKISDNTKNVAADSSVNASDNQQHQININSANAEQLAQF
LNGIGRKKAEAIITYREQSGPFTHVDQLLEVPGLGPSFLERNNGKIKL
>YPTB3938 insertion element IS1661 DNA-binding protein
MMNRGTPRSGQAIVRKRGVPRGPRFALNPRSWIFLSMIWRFGSMKHPFST
RLAAVQHYLSGKATLRETARQFSVGKSPLTRWIRAFRRQGEAGLEHHLSR
TYTPEFRLCVVRYMMANRCSAADASAHFNIPNETIIQNWMKRYREGGKEA
LNPSKTGPTMPKDKYEHDSKPFSEMTHAELEKELEYLRAENAYLKKRKAL
REEKALREQQKKPE
>pYV0010 hypothetical protein
MGGMAAHWFTYQYAVPFCGRAKTLVTLSNAEGESVLISPQQNTAQDISLF
MPRELTVSQGDRVRFTRSDTDRGYVANSLWEVAGFTEDGAVRFRQGDQEK
IVDPQKATEDRHIDLAYTLTAYGVQGASERFVIALFGAEGGRKRMATLHL
FT
>YPTB2096 putative transposase
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHE
KNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRI
TQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAE
WQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGM
WLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHI
QLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAW
DDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIK
KRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSD
HL
>YPTB3875 putative transposase
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPR
PAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAF
IRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRM
LYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTG
QHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMT
RLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML
ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>YPTB0989 putative primosomal replication protein N''
MSTEKLLQVLESQIEALSAQIAPQANTPSQQARFDLNLFSNHGNRFRDYL
QEVRKNMTQLKQVVEENRLQQVAFLADKLVAQISALQRELATQKIRKSNP
EPRDHQSDPYHKLAEHQDYERRILAMIQDRESQLGQQSLLVEQQKIQKEL
AALEGRLMRCRQALIRIERSIEKKENGF
>YPTB2429 conserved hypothetical protein
MFKPHVTVACVVHTQGKFLIVEETINNEKRWNQPAGHLEADETLIQAAER
ELWEETGIRATPQHFLRMHQWLAPDNTPFLRFAFVIELPAQLPTQPHDSD
IDRCLWLSADEILQSMHLRSPLVAESIRCYLQPERYSLDLIGTFNWPL
>YPTB1132 putative transposase
MVTFETVMEIKILHKQGMSSRAIARELGISRNTVKRYLQAKSEPPKYTPR
PAVASLLDEYRDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAF
IRSLSVPQEQEPAVRFETEPGRQMQVDWGTMRNGRSPLHVFVAVLGYSRM
LYIEFTDNMRYDTLETCHRNAFRFFGGVPREVLYDNMKTVVLQRDAYQTG
QHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYTRNSFYIPLMT
RLRPMGITVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML
ALPPEKKEYDVHLDENLVNFDKHPLHHPLSIYDSFCRGVA
>YPTB1864 similar to Orf81 bacteriophage 186
MKNNKLAKAIEAFIAAVKKTGFKIYQALCRYGAHNRANRWLKRNYLILDT
ETTGLGNDAEIIEISIIDCTGKILLDTLVKPLKAIPAEVTAIHGITNEMV
ADAPTWRDIHYQFMTLTNDRTLLIYNALFDSRLIFQTAAANNCPVPEKKY
IFDAECVMESYAKYYGQWDQKRNKFKWQRLSNAAEQQGVVIDGVAHRALA
DCKTTLGIIRAMAGVKS
>YPTB1300 putative DEAD box helicase family protein
MAFTLRPYQREAVDATVAYFRRHTTPALIVLPTGAGKSLVIAELAKLARG
RVLVLAHVKELVAQNHAKYCAYGLEADIFAAGLQQRQSEGKVVFGNVQSV
ARNLPLFDSAFSLLIIDECHRISDEDDSQYQQIIQHLRTGNPQLRLLGLT
ATPYRLGKGWIYQFHYHGITRGDEKALFRDCIYELPLRYMIKHGFLVPPE
RLDMPVVQYDFSRLTSNSDGLFREADLDRELKQQQRITPHIVSQIIEYAA
QRRGVMIFAATVEHAKEVYGLLPKGEAALVSAGTPPAERDALINAFKQQQ
LRYLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLFPGKED
CLILDYAGNPHDLFTPEVGTSKPHSGSQPVQVFCPDCGFANIFWGKCTES
GEIIEHYGRRCQGWFEDDQGARAQCDYRFRFKSCPHCGAENDIAARRCHQ
CQAVLVDPDDMLKAALKLKDALVLRCGGMQLETGQDAKGEWLKATYYDED
GTNTSERFRLTTPAQRMAFEQIFLRPHQRAPGIALKWHTAADIIAQQALL
RYPDFVVARRRGQWWQIREKVFDYKGRFRRADALA
>YPTB3876 putative IS100 transposase
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEE
KLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIE
RNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQR
QGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMI
LTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKA
GVIAEANPE
>YPTB1891 weak similarity to Vibrio transposase
MKKARFTETQILRVLKEVEGGRHVKDVCRENGVSEASYYNCTCKIALGLY
QYTSADDCTRYRVLRLYHRRTASNTLDFIDCVTEERLFPIQRIQTDRGKS
>YPTB3136 putative conserved bacteriophage protein
MNYSSKEIFISAYAAMNTPDDITLRKLNDLIKPADALFLILENEKYKAKE
VAQSWINGNYLILDTETTGLDNAAEIVEISIIDCMGNVLLDTLIKPLGFI
PSDVEAIHGITNKMVDNAPHWCDIHEKFIEIIKSRNFVAYNSRFDTRLIY
QSAEFSGVTTGADDIASASGNCAMLEYARFHGQWDSRQSDFKWQTLIAAA
GQMNVITEGASHRALSDCKTTLGVIKAMAGGEI
>YPTB3036 probable (di)nucleoside polyphosphate hydrolase
MIDDDGYRPNVGIVICNRQGEVLWARRYGQHSWQFPQGGINPGETPEQAM
YRELFEEVGLNKKDVRILASTRNWLRYKLPKRLVRWDTKPVCIGQKQRWF
LLQLMCNEAEINMQRSSTPEFDGWRWVSYWYPVRQVVSFKRDVYRRVMKE
FAATVMPVQEVAPPRVPPAYRRKRG
>YPTB1794 hypothetical protein
MREAETEKREFAEIMKAILAIYGKDGSKAVLKIYWNALLPYDIETVRQAF
SNWVIDPEQGRFSPKPADIIRNIQNIDGKPDWLSANEAWALALPAQDEAN
TVVWTNEIAQAWSIAQPIMQEGDKIGARMAFIAAYERLAKAAQGTGRSPS
WSVSEGWDKETVKRTVEQAVTTGLLPRPKAEKYQLLLPEKGKAGNEVPTK
IRQFLDELKGRIKQDQEARESTWRDESIRLQASLEHKYQESLQQTADHGL
QNNKITED
>YPTB1133 putative IS100 transposase
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEE
KLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIE
RNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQR
QGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMI
LTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKA
GVIAEANPE
>YPTB0302 putative transposase
MMQSRTVYNYRSHRDDRAITQRIREIAETRIRYGCPRIHILLRREGWLVN
HKKTHRIYCLEGLNLRSKRPRRHVTAKHRHARPEVTALEQCWSMDFVADN
LFNGRRVRALTIVDNFSRECLAIEVGQGLRGDDVVAVMDRLKHSLGRIPQ
RLQTDNGSEFISKSMDRWAYENRVTMDCSRPGKPTDNAFIESFNGSLRDE
CLNVHGFLSLEDAQEKIEQWRQEYNHFRPYSSLNNLTPAEFARSHQKGPD
L
>YPTB1872 putative bacteriophage integrase
MAVRKLTTGKWICECYPNGRRGERLRKQFATKGEALSFERRMMQKDQVVE
VSVSNTLKLSNLVSRWYEMHGQTLTSGKTRKVKLEAICERLGDPLVTDFD
KNTFAVYREQKPFRHYPIFSGGVFASGFLIALLIVTFSK
>YPTB0220 conserved hypothetical protein
MAKQPIAKRSIVKKASPQSAGQIRIIGGKWRGRKLPVPDSPGLRPTTDRV
RETLFNWLAPMIQGARCLDCFAGSGALGLEALSRYASETTLLEADRQVAK
QLSDNLTLLKAENGQVVNTNSLQWLAQPGQPFNLVFLDPPFRKGLLAETI
NLLEQFNWLAADAWIYVEAEAESAVADVPANWLLHREKIAGQVAYRLFIR
QQTDLPACTSVAEQEQHHVD
>YPTB3129 Possible phage integrase/recombinase
MSIKKLDDGQYVVDIRPAGRNGKRIRRTFSKKHEAVAFEKYVVVNYHEKE
WLSKPTDKRSLSELSTLWWSYHGQNMDYGQKYKVQLAKVIRIMSDLCAFQ
IDKNVIARYRAIRLAGGVKASSVNRDLAVLSGMFTALINAGVYHSEHPLA
GISKLKPKQTARAFLSQSEIKKLLNCLDGDNRRVAILCLSTGARWGEAIK
LRTEHIIDNRITFVATKNGKQRTVPISSDVFNDLTAMKSGLLFNDAAYLI
FRQKLKSVKTDLPQGQATHVLRHTFATHFMINGGNIITLQRILGHSTIQQ
TMLYAHFSPDYLQDAVSFNPLKGKTSV
>YPTB0704 putative transposase
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHE
KNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRI
TQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAE
WQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGM
WLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHI
QLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAW
DDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIK
KRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSD
HL
>pYV0035 hypothetical protein
MVELCRLLKITRSVYSASLNLRVDVKRLQLRELHQQSRGAAGNRTLSLLM
RQSGYNVGRWLAGRLMRECGLASRQPGKPRYRGEREVSLASPDLLKRQFK
PSEPNRVWSGYISYIKVNGGWCYLALVIDLYSRRIVGSAISSSPDAELVC
RA
>YPTB0977 putative 6-O-methylguanine DNA methyltransferase family protein
MVSCPVNAHIKLNLFSTGIKSPIVQGIHIAVSDNIAVNNNIAVSDNRPRK
SSVKRENAVSPPESRHSDQDEYQEPDYTAEQNTPPVADSFRQRVFHVVAA
IPYGQVATYGDIAQLIGSPRAARQVGGVLKRLPEGSALPWHRVINRYGEI
SLTGDDYLRQKKALVAEGICLDAAGRINLQQYRWRYS
>YPTB1875 putative prophage integrase
MKQSQILPSRVTYINTKGKKNRTVPISEKLFKRIPKNRGALFTPSYDAFK
HALKRAAIELPKGQRTHVLRHTFASHFMMGGGNILVLQQILGHSTILMTM
RYAHFAPDHLDAAIALNSYDKLVID
>YPTB0303 putative IS100 transposase
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEE
KLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIE
RNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQR
QGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMI
LTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKA
GVIAEANPE
>pYV0008 possible transposase remnant
MMDIHIAPYRQPFTFQASVYSRRIVGSAISSSPDAELVCRAWRNALETRP
REKRLLFHSDQGGQYRSKKYRQLLWRNGVMQSMSRRGNCLDNSPMERVKV
NHQCQVAPATIDFDIADISTPHTIGLRRLKLPFQ
>YPTB0012 putative transposase
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHE
KNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRI
TQMDSQILSLYAKSMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAE
WQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGM
WLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHI
QLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAW
DDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIK
KRKVFPTDDSVRKVVYLAIKDASKKMEYADPELAVSDEPFYYRVR
>YPTB0362 conserved hypothetical protein
MSRNKFCQCLITLERPLIPRCYPPNDLIIMEDNMMHTENNSPPGLIPLPD
WYPVAFSHLDAMEYASVTRLWHHEPVLRDLVDELDKRNPGLITFTHCPHC
HSADICPGTRPEEYRCRTCHRCSSPYTHTPFFDLHHARHSRLYAVLVTLW
GTWQVEDAAWLSDCKSKQIWKQYCHRLKPILALIGGRAVTHTPRYLRGFT
PGQQGLHCPACASTQLVYSETMPVGNPEVHCQVCQTDFVMYPDIPKGIDP
FAVNTPQYDIPLPRWFSRLFSHASQAQYQHLREVWQREPVLREAVDRLDA
QNPEQGAVYACPYCQNKHISPRKTASSIEGYYCPACDNPFTATTGTVFTR
MRQEHFWRLYAVLVMLWTQWRPTQIFELCQLRSVHPFLTYHKRLAPLLAE
FDGAPITPYPRNLLGFTPGQQGVCCVYCQSTKLITEGITVMPLDNPYICC
LDCGQRFMLRVWRKQVKSNEKK
>pYV0019 putative transposase
MEYLLAAYRIGVRRGCRLMMQSRTVYNYRSHRDDRAITQRIREIAETRIR
YGCPRIHILLRREGWLVNHKKTHRIYCLEGLNLRSKRPRRHVTAKHRHAR
PEVTALEQCWSMDFVADNLFNGRRVRALTIVDNFSRECLALEVGQGLRGD
DVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENRVTMDFSRPG
KPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQEYNHFRPHSS
LNNLTPAEFARSHQKGPDL
>YPTB0261 cytoplasmic Dnase (function similar to TatD)
MFDIGVNLTSVQFAKDYHQVVNRAKEAGVLGILITGTDADESLAAQTLAA
EYPGYCWSTTGVHPHHASSWQDSVEQKIRTLAATASVVAIGECGLDFNRN
FSTPAQQEVAFTAQLALAAELSLPVFLHCRDAHERFIDLLVPWLDKIPAA
VVHCFTGNSGELDACLALGLSIGITGWVCDERRGLDLRALLPRIPVQQLL
LETDAPYLLPRDLNPKPASRRNEPCFLPHIVQQVAAWRQEDPNWLGQKTD
ENARRVFRLV
>YPTB3311 Putative transposase
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHE
KNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRI
TQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAE
WQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGM
WLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHI
QLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAW
DDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIK
KRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSD
HL
>pYV0022 putative transposase
MLSREDFYMIKQMRQQGAYIIDIATQVGCSERTVRRYLKYPEPPARKTRH
KMVKLKPFMDYIDMRLAENVWNSEVILAEIKAMGYTGGRSMLRYYIQPKR
KMRPSKRTVRFETQPGYQLQHDWGEVELEVAGQRCKVNFAVNTLGFSRRF
HVFAAPKQDAEHTYESLVRAFRYFGGSVKTVLVDNQKAAVLKNNNGKVVF
NSGFLLLAEHYDFLPRACRPRRARTKGKVERMVKYLKDNVFVRYRRFDSF
THVNQQLEQWMADVADKRELRQFRQTPEQRFALEQEHLQPLPDTDFDTSY
FDIRHVSWDSYIEVGGNRYSVPEALCGQPVSIRISLDDELRSYSNEQQVA
SHRLCSASSGWQTVPEHHAPLWQQVSMVEHRPLSAYEELL
>pYV0001 ypkA; putative targeted effector protein kinase
MKSVKIMGTMPPSISLAKAHERISQHWQNPVGELNIGGKRYRIIDNQVLR
LNPHSGFSLFREGVGKIFSGKMFNFSIARNLTDTLHAAQKTTSQELRSDI
PNALSNLFGAKPQTELPLGWKGEPLSGAPDLEGMRVAETDKFAEGESHIS
IIETKDKQRLVAKIERSIAEGHLFAELEAYKHIYKTAGKHPNLANVHGMA
VVPYGNRKEEALLMDEVDGWRCSDTLRTLADSWKQGKINSEAYWGTIKFI
AHRLLDVTNHLAKAGVVHNDIKPGNVVFDRASGEPVVIDLGLHSRSGEQP
KGFTESFKAPELGVGNLGASEKSDVFLVVSTLLHCIEGFEKNPEIKPNQG
LRFITSEPAHVMDENGYPIHRPGIAGVETAYTRFITDILGVSADSRPDSN
EARLHEFLSDGTIDEESAKQILKDTLTGEMSPLSTDVRRITPKKLRELSD
LLRTHLSSAATKQLDMGGVLSDLDTMLVALDKAEREGGVDKDQLKSFNSL
ILKTYRVIEDYVKGREGDTKNSSTEVSPYHRSNFMLSIVEPSLQRIQKHL
DQTHSFSDIGSLVRAHKHLETLLEVLVTLSQQGQPVSSETYGFLNRLAEA
KITLSQQLNTLQQQQESAKAQLSILINRSGSWADVARQSLQRFDSTRPVV
KFGTEQYTAIHRQMMAAHAAITLQEVSEFTDDMRNFTVDSIPLLIQLGRS
SLMDEHLVEQREKLRELTTIAERLNRLEREWM
>pYV0090 putative transposase
MKKARFTETQILRVLKEVEGGRHVKDVCRENGGSEASYYNWKSKYGGMES
SDIKRMKEREEENRRLKQMYASLSLDHEILKDVVAKKL
>pYV0023 possible transposase remnant
MYRLYHLSSLGVKRRRRRKGLATERLPLLRPAAPNLTWSMDFVMDALATG
RRIKCLTCVDDYTKECLTVTVAFGISGVQVTRILDSIALFRGYPATIRTD
QGPEFTCRALDQWAFEHGVELRLIQPGKPTQNGFIESFNGRFRDECLNEH
WFSDVSHARKTISEWRQDYNECRPHSTLNYQTPSEFAAAWRKGNSDSEGS
DITK
>YPTB1403 putative polynucleotide ATPase protein
MSNMSLDFSQNEFQPLAARMRPLTLDQYIGQQHLLAPGKPLPRAIVAGQL
HSMILWGPPGTGKTTLAEIIGRYGQADVERISAVTSGIKEIREAIERARQ
NRDAGRRTILFVDEVHRFNKSQQDAFLPHIEDGTITFIGATTENPSFELN
SALLSRARVYLLKALTAADIEKVIDQAMSDSSRGYGGQNILLPDETRRMM
SELVGGDARRALNSLEMMADMAEIDASGVRVLTPELLKEVSGERSARFDN
KGDRYYDLISAVHKSIRGSAPDAALYWYARIITAGGDPLYVARRLLAIAS
EDVGNADPRAMQVAISAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAVY
AAFKAAMQDARDKPDFDVPEHLRNAPTKLMKEMGLGAEYRYAHDEQHAYA
AGENYFPPEMAATRYYLPTSRGLEGKIGEKLAWLAEQDKNSPIKRYR
>YPTB0498 conserved hypothetical protein
MSDSLWHLYLLRTASGMLYTGITTDVARRLAQHQAGKGAKALRGKGELTL
VFHCEAGDRSTALKLEYRVKQLSKQQKEKLVIDQPRLLTTLFLAS
>YPTB3494 Conserved hypothetical protein
MSQRDTGAHYENLARRHLERAGLVFQAANVAFRGGEIDLIMRDGDAWVFV
EVRFRRNDLFGGAAASITPRKQQRLHLAAAVWLAQRGASFATTSCRFDVV
AITGNQLEWLPNAFNTD
>YPTB1883 conserved hypothetical protein
MTVTAVAQMEGISEATLYNWRNQAKSEGEPVPGAEKNSEQWPAEARLAVI
VETATLSETEIAEYCRKKGLYPAQIAQWKQAFLQVPSGDDKVALKQSQKE
NKQLKKELLRKEKALAETAAILVLRKKLRDYYGETDEDD
>YPTB0038 putative DNA ligase
MNILNLKIIMFLLISNIIVVGGAWATSTCPDWPATRIAVEINALEQQLNK
WSAAYHQQGHSPVTDDIYDQLQDKLRVWQSCRGLPDKTESQPIPGKGQFL
HPVAHTGLKKLKDETALTRWMAGRKNLWVQPKVDGVAVTLVYHGGKLVQL
LSRGNGVKGQNWTEKAPFISAIPQYIANAPALLTLQGELFLLMDGHQQAK
SGGVNARSTVAGALMRKSPSPLLAQVGVFIWAWPDGPTTMKEKVALLQVM
GFPFTAKYSEPVMSHLDVVQWRQFWFQAPLPFVTDGVVVRQEEEPAGRYW
QATPGQWSMAWKYPPLQHIAEVKDIHFTLGRTGKGTVVLEVLPIKIDDKW
IRRVNIGSVTRWKQWDIAPGDHITLALAGHGIPRLDNVVWRVHQRNTITA
PNWDKFHQLSCFQRLPHGCEPQFLSRLIWLSGPGGLDIGGIGGGFWQKLI
HHELINDLVGWLLLTPEQIASIPGIGNARAEKIYQQFQRAKQQPFSRWLL
ALGFPQVVSVDAQWQVVLRRSLSEWATMAGIGQMRAKQIKHFLDHPDVQA
LADFLSTQKVVGFELTE
>YPTB1648 MutT-family protein
MSELITGQYLSEFINRFQLQLPQPDNVLTHSHYFSATNRRAAVLIPIICR
PEPTLLLTRRADHLRKHAGQVAFPGGKADPDDQSLISTALREAEEEVAIP
ASVVHVLGKLAPLNSSSGYHVTPIVGLVPANIPFYGNDEEVAGLFEIPLH
EALSLSRYHSLDIHREGINHRVYLSWYENQFIWGLTATIIRHLAQQVSI
>YPTB0666 putative IS1400 transposase B
MIQGLTEAAERYPRYGFKKLFQILRRQSQRWSHKQVHRIYCLLKLNFRRK
GEQRLPVRNPASLATPEQLNQSWSIDFMHDALVCGRRFRTFNVVDDFNRE
ALAIEIDLNIPAQRVVCAGQERGKS
>YPTB3872 putative IS100 transposase
MVQPSFFTDILSYLPMTREEASLFFRLLNRRYEKASIILTSNKGFADWGE
MFGDNVLATAILDRLLHHSTTLNIKGESYRLKEKRKSGVLAKNATPISDD
EMAESGQHQ
>pYV0051 hypothetical protein
MKRYQFTDADSSWQLDEIYIRVNGKWFYLYRAINKHGTTLDFYFSPKRNK
NTAYPFIKRVLKTYSVERQPKILNTDKHSSYGYAITRLMKEGKDTRCCKA
AASQIPE
>pYV0095 putative transposase
MTTRHRHARPEVTALDQCWSMDFVADNLFNGHRVRALTIVDNFSRECLAL
EVGQGLRGDDVVAVMDRLKHSLGRIPQRLQTDNGSEFISKSMDRWAYENR
VTMDFSRPGKPTDNAFIESFNGSLRDECLNVHGFLSLEDAQEKIEQWRQE
YNHFRPHSSLNNLTPAEFARSHQKGPDL
>pYV0036 hypothetical protein
MSRVVKYQRSTIEVARALELDPSQLRKWIHQYKEEVSGVTPDNPALIPEQ
REIQSLRAQIKRLEMEKEILKQAAVLMSEFPIKSLR
>YPTB3864 putative phage integrase (partial)
MPLSDRQIRRAKPQEKAYTLSDGQGLSLLIEPNGSKGWRFRYRFAGKARL
MSLGTYDLVSLAEARCKRNTQLCPTTANRLATSNLSSSHQ
>YPTB3422 conserved hypothetical protein
MSFNLPGMYLYYLSRDNLAPEEYERIISPHAAWARICREYEFDDSHNTSR
YLINMREREQRFSPDQPRPGGIREKEKLEKLVFSGDVVMLSDMYGPARLF
YINGEGQLMSADPHAFRFEGAAKIIKAFDDGVKCRNYQRTGGKPRSTKSP
MKVRPSVSERSMITRASDESGRVLSAKWQSVTDSAKTLWEATPFTHDKAT
TEAARGRIADSAVGTLEGLGTLMGPSAQEYMAGAFNPEQAAINKVRQQNQ
QAAGKAIYDNTKGAVTDAYQRNGLAGAAAMVVTASVAELAGTKGLGTVEK
VGTLGDVAKLGKAVELEKLEGYLGTYKGQKVLLQNVDVVRMDYVRRSTAD
RNLLRKEFDNGVRKKFLKDIANNPEVVKRLDAFDRSVLAKGVVPDGYQVH
HKLPLDDSGNNNFDNLVLISTRPEHAAFTTTQKHITKNLTPTGTNIVLWP
KPQGIIYP
>YPTB1809 putative IS100 transposase
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEE
KLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIE
RNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTAQR
QGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMI
LTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGESYRLRQKRKA
GVIAEANPE
>YPTB0292 conserved hypothetical protein
MELQLTGKESGWWIVSHENKLWLPKGELPQGNAANWSLQGATARQIGEWQ
GQPVWLIRQMMPSGMGSVRQLLDVDRGLFQLAGRGVQLAEFYRSHRFCGY
CGHEMHASRTEWASLCNHCRERYYPQIAPCVIVAIRRGDEILLAQHVRHR
GGINTVLAGFVEVGETLEQAVSREVLEESNIHIKNLRYVTSQPWPFPHSL
MMAFMADYDSGELCHDPKELLNAGWYRYDQLPLLPPPGTVARRLIEDTVV
LCREHSDLSQ
>pYptb0035 ArdC, antirestriction protein
MTMTLNSQLTSPNTVPATSVSPLDESGSSNTKWSKGKKAPTQDLYQTVTD
SIIEALEAGVKPWVCPWQRVNGMSGIPANYTTGATYSGINIMLLWASASK
QGFTDGRWLTYKQAEAKGAQVRKGEKGTTAIFYKTLEKEDEQGETTKIPM
LKTFTVFNVQQIDGLPLETAEQETSPIAEPTTFESLPRVEALIQQCGATI
IERGQAAYFRPSTDEIVLPERHLFDDAANFYATALHELTHWTGGKTRLNR
DMRGVFGNASYAFEELIAELGSAFLMADFGVVGDVQHESYIASWLNALKN
DKRFIFKAASSASKAHQFLIASNSAE
>YPTB3884 MJL12.14, conserved hypothetical protein
MCELDILHDSLYQFCPELHLKRLNSLTLACHALLDCKTLTLTELGRNLPT
KARTKHNIKRIDRLLGNRHLHKERLAVYRWHASFICSGNTMPIVLVDWSD
IREQKRLMVLRASVALHGRSVTLYEKAFPLSEQCSKKAHDQFLADLASIL
PSNTTPLIVSDAGFKVPWYKSVEKLGWYWLSRVRGKVQYADLGAENWKPI
SNLHDMSSSHSKTLGYKRLTKSNPISCQILLYKSRSKGRKNQRSTRTHCH
HPSPKIYSASAKEPWILATNLPVEIRTPKQLVNIYSKRMQIEETFRDLKS
PATD
>YPTB1139 RecN, DNA repair protein RecN
MYRGFTMLVQLTISNFAIVRELEIDFQPGMTAITGETGAGKSIAVDALGL
CLGNRSDGSMVRLGATRADICARFSLADTPSARQWLENNHLDDNNECLLR
RAIGADGRSRGFINGTPVPVSQLRELGQHLIQIHGQHAHQLLLKPDHQKQ
LLDAYANQSSLLAEMKAAYQIWHQSCRDLALHQQQSLERTARRELLQYQL
KELNSFSPQAGEYEQIDIEYKRLANSGQLLSLSQQTLQLLSDDEQNNILS
QLYAAKHQLTELASMDEQFNNLLNMLEEASIQISEASDELRHYAEQLDMD
PNRLYELEKRLSRQLNLARKHHVAPEELPQFHQQLLDEQELLSQQENDHE
QLSNAVNTHYQQALAIAKRLHQERQYYANELAALITESMHELSMPHGKFA
IETIFEPEHLSAEGATRIEFCVTTNPGQPLQALVKVASGGELSRIALAIQ
VITARKMDTPALIFDEVDVGISGPTAAIVGRLLRQLGESTQVMCVTHLPQ
VAGCGHQHFFVSKQTDGTETETHMHRLDKKARLQELARLLGGSEVTKNTL
ANAKELLAA
>YPTB3747 dam, DNA adenine methylase
MKKNRAFLKWAGGKYPLVDDIRRHLPAGDCLIEPFVGAGSVFLNTEFESY
ILADINNDLINLYNIVKLRTDDFVRDARVLFTGDFNHSELFYQLRQEFNA
STDAYRRALLFLYLNRHCYNGLCRYNLSGEFNVPFGRYKKPYFPEAELYW
FAEKSQNAVFVCEHYQETLLKAVQGAVVYCDPPYAPLSATANFTAYHTNN
FGIADQQNLARLAYQLSTESKVPVLISNHDTELTRNWYHQAASLHVVTAR
RTISRNILGRSKVNELLALYS
>YPTB1863 dam, putative DNA adenine methylase
MKRIFSPLKWAGSKGRIMPTLRQHLPAGKRLVEPFAGSCSVMLNTDYDEY
LIADINDDLINFYQQLQRDCESIIVLAKELFKFDNSEANYYSNRQHFNER
ELSDEYRAAIFLYLNRHCHGGICRYNQKGEFNVPYGRYKAPYFPEAEIRY
FAEKSQKATFVCCDFFEALTMTMPGDVVYCDPPYIPTSATADFTSYHTGG
FSSNEQFWLSEILTIIADQGCHVIASNSDTPHGRYLYESFDIHSITAPRS
ASCKADGRKAVGEIIATLRAAI
>YPTB1652 dbpA, ATP-dependent RNA helicase
MSTTSFSSLTLPAEQLSNLNELGYTEMTPVQAAVLPAILNGQDVRAKAKT
GSGKTAAFGIGLLDKIAVGEFVTQALVLCPTRELADQVSKELRRLARFTQ
NIKILTLCGGQPMGHQLDSLVHAPHIVVGTPGRIQEHLRKKTLVLDELKT
LVLDEADRMLDMGFSDAIDDVIAYTPPQRQTLLFSATYPSGIEQISARVQ
RQPLNVEVGDTDEEPAIEQVFFETTREKRLPLLISVLSYYQPASCVVFCN
TKKDCQSVYESLESRGISVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKDLELVINFELAFDPEIHVHRIGRTGRAGMSGLAVSLCTPQE
MVRAHTIEDYLQIKLKWTPAEQVSRSTNIMLEPEMVTLCIDGGRKAKIRP
GDILGALTGDAGLTAADVGKIDMFPVHAYVAIRKASAKRALQQLQQGKIK
GKNCKARLLK
>YPTB0486 deaD, cold-shock dead-box protein A
MTTELETSFADLGLSAPILSALTDLGYEKPSPIQLECIPHLLNGRDVLGM
AQTGSGKTAAFGLPLLHNIKADLKSPQVLVLAPTRELAVQVAEALSSFSK
HINGVNVVALYGGQRYDVQLRALRQGPQVVVGTPGRLLDHLKRGTLNLSN
LSGLVLDEADEMLRMGFIEDVETIMAQIPAEHQTALFSATMPEAIRRITR
RFMKEPQEVRIQSSVTTRPDISQSYWRVGGGYRKNEALVRFLEAEDFDAA
IIFVRTKNATLEVAEALERSGYNSAALNGDMNQALREQTLERLKDGRLDI
LIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLF
VENRERRLLQNIERTMKLTIPEVELPNADLLSERRLAKFAAKVSQQLESS
DLDMYRALLAKLQPEEEFDIETLAAALLKMAQGERPLILPPEAPRRPQRE
FNSRDDRGNDRGSRDRGDSRRDNRSDSRSADSRDGGERPARRERRDVGEM
ELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKG
MPGEMLSHFTRTRILNKPLNMQLLGDAQPHERRERPAGGNGGERRGGGRP
FSGERREGAGAPPRRSFSGDRAPTGGGERRGNRDGQRSAAPRRDDAAAPA
AAAAAPARRRFGDA
>YPTB1245 dinG, putative ATP-dependent helicase DinG
MALSSAVKEQISQWYKALQQQIPDFISRAPQRQMIAEVAKTLSGDAGRHL
AIEAPTGVGKTLSYLIPGIAVSRAENKPLVVSTANVALQDQIYSKDLPLL
KKIIPDLKFTGAFGRGRYVCPRNLAAMCTDVSGQGDLSLFLGDELAPANG
EEQATCLALSKSLNSYVWDGLRDHHQLALSDSLWAKLSTDKANCLGRNCH
YFRECPFFIARKEIESADVVVANHALVMAALETESVLPNPKELLLVLDEG
HHLPDVARDALEIEGEITAVFANMQLDMIVRLVDQCLVQYRPKNPPGLAH
PERLKDHCEQLRELMLSVEQQVSQLLPTEGNPAVYRFEMGDLPESLTESC
AKLFKLTDALRGVAEFVLNDLSEQTGKHDIVRLHRAMIQMSRTLGYLEAM
SKLWRLAAMEKASNAPISKWVTREYRDNQTHIYFHCVGIRVSDQLDKMLW
RKVPHVIVTSATLRSLNSFARLQEMSGLSEKAGDRFETLSSPFNHIEQGK
LIIPKMRFEPTMANEAEHLAEMAQFFRAQHASGRHKGMLILFSSHRAMQT
FLSHVTDLRLMLLVQGDQPRYRLVEEHRKRVNNGTASVLIGLQSFAEGLD
LKGELLTQVHIHKIAFPPIDSPVILTEGEWLKSLKRYPFEVQSLPSASFN
LIQQVGRLIRSNECRGEIVIYDRRLLTKGYGARLLAALPVFPIEQPDMPE
GPLVTPTAVKGPAKRTKRVRKTRDKP
>YPTB0896 dinP, DNA polymerase IV, devoid of proofreading, damage-inducible protein P
MRKIIHVDMDCFFAAVEMRDDPRLRDIPLAIGGSKERRGVISTANYPARR
YGVRSAMPTAMAFKLCPQLTLLPGRMAAYKEASQHIREIFARYTPLIEPL
SLDEAYLDVSDSLACGGSATLIAQEIRQSIASELNLTASAGIAPIKFLAK
IASELNKPNGQYVITPNQIQPFLQDLPLSKIPGVGAVTAKRLQALGLVTC
GEIQKYPLAELLKHFGKFGRVLWERSHGIDEREISPDRLRKSVGVEKTLA
EDIYDWESCEALIEELYLELETRLRKVKPDLHIARQGVKLKFHDFQQTTQ
EHTWPVLNKADLLQIAHAAWNERRAERGVRLVGLHVTLLDPQLERQLLLD
WG
>YPTB3943 dnaA, chromosomal replication initiator protein
MSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDW
VRDKYLNNINGLLNDFCGTEVPLLRFEVGSKPAARAHNNPVTASVSAPVA
PVTRSAPMRPSWDNSPAQPELSYRSNVNPKHTFDNFVEGKSNQLARAAAR
QVADNPGGAYNPLFLYGGTGLGKTHLLHAVGNGIMARKANAKVVYMHSER
FVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKERSQEEFFHTFN
ALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEPPELETRVAI
LMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAIT
IDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLLSKRRSRSVAR
PRQMAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIK
EDFSNLIRTLSS
>YPTB0375 dnaB, replicative DNA helicase
MAAKKPTNKMTEPRDRQMEGLKLPPHSLEAEQSVLGGLMLDNERWDNVSE
RVASKDFFSRPHRRIFTEMQRLLENSKPIDLITLSESLEQKGDLDSVGGF
AYLAELSKNTPSAANIGAYADIVRERAVVREMISVANEIADAGYDPQGRS
SEDLLDLAESKVFQIAESRASKDEGPKSVDRILEDTVARIEQLYQRPHDG
VTGVSTGFTDLDKKTAGLQKSDLIIVAARPSMGKTTFAMNLCENAAMMQD
KPVLIFSLEMPGDQIMMRMLASLSHVDQTRIRTGQLDDEDWARISSTMGI
LMEKRNMYIDDSSGLTPTEVRSRARRIFREHGGLSLIMIDYLQLMRVPSL
SDNRTLEIAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLR
ESGSIEQDADLIMFIYRDEVYHENSDEKGIAQIILGKQRNGPIGSVRLKF
NGQWSRFDNYAGPQYDDE
>YPTB2988 dnaE, DNA polymerase III, alpha chain
MIQSTHFWYLDMAEPRFVHLRVHSDYSMIDGLAKIGPLVKRAAALGMPAL
AITDFTNLCGLVKFYGSAHGAGIKPIIGADFYVQSEILGDELAHLTVLAR
NNEGYQNLTLLISEAYQRGYGAAGPIIDRDWLIKHKEGLILLSGGRMGDV
GKFLLRGNQVQVDQCLAFYQEHFPDCYYLELIRTGRPDEENYLHAAVALA
TERGLPVVATNDVRFIDESDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQF
MRDEEQMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGEMSTE
DFLVEKAKQGLEERLEFLFPDPEVRLQKRPEYDERLDIELKVINQMGFPG
YFLIVMEFIQWSKDNGVPVGPGRGSGAGSLVAYALKITDIDPLEFDLLFE
RFLNPERVSMPDFDVDFCMEKRDLVIEHVAEMYGRDAVSQIITFGTMAAK
AVIRDVGRVLGHPYGFVDRISKLIPLDPGMTLEKAFAAEPQLAEIYEADE
EVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVT
QFDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKTGLEPIDIASI
PLEDKKSFDMLQRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFR
PGPLQSGMVDNFIDRKHGREAISYPDIEWQHESLKPVLEPTYGIILYQEQ
VMQIAQVLSGYSLGGADMLRRAMGKKNPAEMAKQRSVFEDGAKNQGIDGE
LAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPAEFMAAVMTA
DMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIK
GVGEGPIEAILEARKEGGYFKELFDLCARVDTKKLNKRILEKLIMSGAFD
RLGPHRAALMSSLGDALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYA
NVPPWQEQVVLDGERETLGLYLTGHPITQYLKEIERYAGGMRLKDMHPTD
RGKMTTAVGLVIAARVMVTKRGNRIGICTLDDRSGRLEVMLFTDALEKYQ
HLLEKDRILIATGQVSFDDFSGGLKMTARELMDISEAREKYARGLAISLT
DRQIDDQLLNRLRQSLEPHRAGTIPVHLYYQREDARARLRFGATWRVTPT
DRLLIDLRTLVGNEQVELEFD
>YPTB3417 dnaG, DNA primase
MAGRIPRVFINDLLARTDIIDLIDARVKLKKQGKNYHACCPFHHEKTPSF
TVNGEKQFYHCFGCGAHGNAVDFLMNYDRLEFVESIEELATMHGLEVPYE
AGSGTTQIERHQRQSLYQLMESLSAFYQQSLKGQNAKQAREYLKHRGLSE
EIIQHFAIGFAPPGWDNALKRFGRDGESRTALNDAGMLVTNDTGRTYDRF
RERVMFPIRDKRGRVIAFGGRILGDGVPKYLNSPETEIFHKGRQLYGLYE
AQVNHPNPTRLLVVEGYMDVVALAQFGIDYAVASLGTATTAEHIQLLFRA
TDNVICCYDGDRAGRDAAWRALETALPYLNDGRQLRFMFLPDGEDPDTLV
RKEGKDAFEQRMEAAQPLSTFLFETLMPQVDLSSPDGRAKLSTLALPLIS
QVPGEALRLYLRQQLGNKLGLLDDSQLDKLMPKQIDNANTYQPPQLKRTT
MRILIGLLVQNPQLATLIPSLQGLEQAKLAGLPLFIELVETCLAQPGLTT
GQLLELYRDNKFSQQLETLATWNHMIVEDMVEPTFVDTLASLYDSILEQR
QETLIARDRTHGLNAEERKELWSLNLALARKK
>YPTB3942 dnaN, DNA polymerase III, beta subunit protein
MKFIIEREHLLKPLQQVSSPLGGRPTLPILGNLLLQVTEGSLRLTGTDLE
MEMVACVALSQSHEPGATTVPARKFFDIWRGLPEGAEITVALDGDRLLVR
SGRSRFSLSTLPAIDFPNLDDWQSEVEFTLPQATLKRLIESTQFSMAHQD
VRYYLNGMLFETEGEELRTVATDGHRLAVCSMPIGQTLPSHSVIVPRKGV
MELVRLLDGGDTPLRLQIGSNNIRAHVGDFIFTSKLVDGRFPDYRRVLPK
NPDKMLEAGCDLLKQAFSRAAILSNEKFRGVRLYVSHNQLKITANNPEQE
EAEEILDVSYEGTEMEIGFNVSYVLDVLNALKCEDVRLLLTDSVSSVQIE
DSASQAAAYVVMPMRL
>YPTB2964 dnaQ, DNA polymerase III, epsilon chain
MIITPTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRNFHV
YVKPDRLVDPEAYGVHGISDEFLADKPTFADITPEFLDFIRGAELVIHNA
AFDIGFMDYEFRMLQQDIPKTETFCTITDSLLMARRLFPGKRNNLDALCD
RYQIDNTKRTLHGALLDAEILAEVYLAMTGGQTSLTFSMEGEVSQNNASE
DIQRITRPASALKIIYATEDELANHESRLDFVMKKGGSCLWRMPLEAEEE
TKAE
>YPTB0992 dnaX, DNA polymerase III, tau and gamma subunits; DNA elongation factor III
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVG
KTSIARLLAKGLNCETGITATPCGTCANCQEIEQGRFVDLIEIDAASRTK
VEDTRELLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPAHV
KFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRAQLEKVLLAEQITSDA
RALQLLARAADGSMRDALSLTDQAVSMGQGQVTTVTVSQMLGTLDDEQPL
AIIEALVSADGARVMAQIEQAASRGVDWENLLVESLSLLHKIAMVQLLPS
MLDNHYAAIEPRLRELARTLPPADIQLYYQTLLVGRKELAYAPDRRMGVE
MTLLRALAFHPKAIIAEPQIAHVAAPSAIADNAVPTSQGGQHRQEPASVP
PSSHQEAPPLGAVASSVQLPESTAQLLQARTQLLRQSGTTTTKKNEPAAP
GKARPANSALERLASVTERSQQRLAAKTTEEKKPAKKEAYRWTAKNQPEV
AAEPIATPKALRSALEHEKTPELSAKLAEEAIARDPWAAEVNKLQLPKLV
QQLALNAFKQEIEPGNICLHLRSAQRHLNSASAQKALSDALSELHGNAVT
LSVIEDDNPAERTPLEWRQAIYEEKLAQARQSIIADNNIQTLRRFFDAEL
DEDSIRPI
>YPTB3205 endA, Putative endonuclease I precursor.
MLRNILFLLVLSSPLLPLISHSHGINNFSQAKAVAAKIHQDAPGSFYCGC
QIDWQGKKGIPDLNSCGYQPRKNAARAARIEWEHVVPAWQFGHQRQCWQQ
GGRKNCAKDPVYRQIETDLHNLQPAIGEVNGDRNNFMYSQWNGGSGQYGQ
CAMKVDFKNKLAEPPVRARGAIARTYFYMRDQYQLRLSSQQSKLFGVWDR
QYPVTDWECLRDERIAKTQGNHNPYVQRACQRPKS
>YPTB3577 fiS, DNA-binding protein Fis
MFEQRVNSDVLTVATVNSQDQVTQKPLRDSVKQALKNYFAQLNGQDVSDL
YELVLAEVEQPLLDMVMQYTRGNQTRAALMMGINRGTLRKKLKKYGMN
>YPTB2409 flhD, regulator of flagellar biosynthesis, acts on class 2 operons
MSTSELLKHIYDINLSYLLLAQRLINDEKASAMFRLGITDTMADALSQLT
LPQMVKLAETNQLVCHFRFSDHNTIHHLTKESRVDDLQQIHTGILLSSHL
LHELSLKDDSTPKKRA
>YPTB1256 gyrA, DNA gyrase subunit A
MSDLAREITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLF
AMNVLGNDWNKPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRY
MLVDGQGNFGSVDGDSAAAMRYTEIRMSKIAHELLADLEKDTVDFVPNYD
GTEQIPAVMPTRIPNLLVNGSSGIAVGMATNIPPHNLSEVIDGCLAYIED
ENISIEGLMEYIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARAEVEA
DAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVIEIKRDAVGEVVLNNLYSLTQLQVTFGINMVALSQGQPKLLNLKDI
LVAFVRHRREVVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRA
STPAEAKAGLIASPWELGNVASMLERAGDDAARPEWLEAEFGIRDGKYYL
TEQQAQAILDLRLQKLTGLEHEKLLDEYKELLTLIGELIFILENPDRLME
VIREELVAIKEQYNDLRRTEITANTSDINIEDLINQEDVVVTLSHQGYVK
YQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEPNERITAILPVREYEEGRHVFMAT
ASGTVKKTALTEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSAL
GKVVRFPEGQVRSMGRTATGVRGINLNGDDRVISLIIPRGDGEILTVTEN
GYGKRTAVAEYPTKSRATQGVISIKVSERNGKVVGAVQVAPTDQIMMITD
AGTLVRTRVSEVSVVGRNTQGVTLIRTAEDEHVVGLQRVAEPEEDDDILD
GESSEGEEGSEENAALNAPSDDVADEDTDAEDDTDAEDETDVEDDNA
>YPTB3940 gyrB, DNA gyrase subunit B
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDE
ALAGHCKEILVTIHADNSVSVQDDGRGIPTGMHDEEGVSAAEVIMTVLHA
GGKFDDNSYKVSGGLHGVGVSVVNALSEKLELVIRREGKVHEQTYKMGVP
QAPLKVVGETEQTGTTVRFWPSFQTFTNNTEFQYEILAKRLRELSFLNSG
VSIKLKDKRNDKEDHFHYEGGIKAFVEYLNKNKNPIHPKVFYFSTMKDDI
GVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDKE
GYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVE
TLMNEKLVEYLLENPTDAKIVVGKIIDAARAREAARKAREMTRRKGALDL
AGLPGKLADCQERDPALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKI
LNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDAD
VDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKGKQEQYIKDDD
AMEQYQMTLALDGAALHTNAHAPALAGEPLEKLVAEHYSVQKTIARMERR
YPRALLNNLIYQPTLQEEDLGNKEVVTQWIDSLVVLLNEKEHHGSSYSSV
VRENRERQLFEPILRIRTHGVDTDYDLDFDFIHGGEYRKICLLGDKLRGL
IEDGAFVERGERRVPVSSFEEALDWLVKESRRGLAIQRYKGLGEMNPDQL
WETTMDPESRRMLRVMVKDAIAADQLFTTLMGDAVEPRRAFIEENALRAA
NIDI
>YPTB1101 holA, DNA polymerase III, delta subunit
MIRIYPEQLVAQLHEGLRACYLLCGNEPLLLQESQDHIRRVASQHDFTEH
FSFALDAHTEWEHIFSLCQALSLFASRQTLLLSFPDSGLTAPISEQLVKL
SSLLHPDILLILRANKLTKAQENSAWFKALSKNGVFVSCQTPEQAQLPRW
VSARAKSLNLNVDDAAIQLLCYCYEGNLLALSQALERLSLLYPDGKLTLP
KVEQAVNDAAHFTPYHWLDALLMGKSKRAWHILQQLQQEDSEPVILLRTV
QRELLLLLALKRQMEQVPLRALFDQHKIWQNRRPMMTQALQRLSLQQLQQ
AVHLLTQMEIRLKQDYGQSIWPELETLSMLMCGKTLPESFFDAH
>YPTB2465 holB, DNA polymerase III, delta' subunit
MNWYPWLNAPYRQLVGQHSTGRGHHALLLHSLPGNGEDALIYALSRWLMC
QQRQGEKSCGECHSCRLMLAGNHPDWYVLTPEKGKSSIGVELVRQLIDKL
YSHAQQGGAKVVWLPHAEVLTDAAANALLKTLEEPPEKTYFLLDCHQPAS
LLATLRSRCFYWYLACPDTAICLQWLNLQWRKRQIPVEPVAMLAALKLSE
GAPLAAERLLQPERWSIRSALCSGLREALNRSDLLSLLPQLNHDDAAERL
QWLSSLLLDALKWQQGAGEFVVNQDQLPLVQQLAHIAATPVLLQLAKQLA
HCRHQLLSVVGVNRELLLTEQLLSWETALSTGTYSTLPSL
>YPTB0530 holC, DNA polymerase III, chi subunit
MKNATFYLLEHDTPAGELRAHEALACEIAAERWRAGKRVLIACESQEQAQ
RLDEALWQRAPEQFVPHNLAGEGPKYGAPVELAWPERRGNSPRDLLISLL
PEFAGFATAFHEVVDFVPYEENLKQLARDRYKSYRSVGFHLTTATPPTN
>YPTB0573 holD, DNA polymerase III, psi subunit
MASRRDLLLQQLGITQWVLRRPAVLQGEIAIHLPEDTRLLIVAQQLPEHG
DPLLCDVLRSLGLTPHQVYALTPDQVAMLPEDTQCNSWRLGISEPLAVAG
AQLHSPELAGLYQDAGAKRALWQQICHYEADFYPDASRSGHSVPN
>YPTB0737 hrp, helicase, ATP-dependent
MSERKNDVAIAALPVSEVLDELLSALQSSSQVLLHAPTGAGKSTWLPLQI
LQQSQFLNSGSPGRIIMLEPRRLAAKNVAYRLAQQLGELPGQTVGYRMRA
ESKIGPDTRLEVVTEGILTRMLQQDAELQGVSLVILDEFHERSLQADLAL
ALLLDVQQGLRDDLKLLIMSATLDNQRLSALLPSAPAIVSAGRSFPVERS
YQPLSSHERLEEGVASRVKRLLNEQPGSLLLFLPGVSEIHRVMERLHGEV
ASDTDLCPLYGALPLSEQQKAIQPAAIGRRKVVLATNIAETSLTIEGIRL
VVDSGLERVARFDIKNGLTRLVTQRISQASMVQRAGRAGRLEPGICWHLF
AKEQAERAAEYSEPEILNSDLCGLWLELLSWGCQDAAQLCWLDHPPAAAL
AVARDLLGRLDAIDDQGQLTATGRTMATLGCEPRLAAMLCFGAGHSPDAL
ATAALLAAILEEPPRSGQIDLHDWLSRPQPHWQRRARQLTQRLNARGGSV
DHALAAQLLALAYPDRIAQQRGQDGRYLLANGMGAAMAQDEALSRSPWLV
AVGLLQNHSGPDARILLALPVDIEQLVTCLPRQVEERTVVEWDDEKGTLR
AWRRWQIGRLILRAQPLAKPDDAALQQALLNWVREQGLQILNWDEPAEQL
RTRLQCAARWLPEAPWPAVDDDSLQDKLAIWLQPSLSGVRDLRGLRQVNI
AEALTRLLDWKQRQRLDTELPTHYTVPTGSRLPIRYYVDRPPVLAVRLQE
VFGEQQSPMLASGRVAVVLELLSPAHRPLQITGDLAAFWQGAYREVQKEM
KGRYPKHVWPDDPAHTRPTRRTKKYQDK
>YPTB2241 hrpA, ATP-dependent helicase
MKSSLTALSTQLGELMLRDQQRIQRRLHSARKINNPDAIQAITHEIEAEI
AIAMQRVTRRRAACPAISYPDNLPVSQKKQDIYNAIRDHQVIIVAGETGS
GKTTQLPKICLELGRGVKGVIGHTQPRRLAARTVANRIADELDTSLGGCV
GYKVRFNDQVGENTLVKLMTDGILLAEIQQDRLLMQYDTLIIDEAHERSL
NIDFILGYLRELLPKRPDLKVIITSATIDPQRFSQHFNNAPIIEVSGRTY
PVEVRYRPIVDDADDVDRDQLQAIFDAVDELGRESAGDILIFMSGEREIR
DTADALIKQNLPHTEVLPLYARLSNSEQNRVFQSHHGRRIVLATNVAETS
LTVPGIKYVIDPGTARISRYSFRTKVQRLPIEPISQASANQRKGRCGRVS
DGICIRLYSEQDFLSRPEFTDPEILRTNLASVILQMTSLGLGDIAAFPFV
EAPDKRNIQDGVRLLEELGAIQTASNGHQQLTPLGRQLAQLPVDPRLARM
VLQAQKSGCVRELMIITSALSIQDPRERPVDKQQASDEKHRRFADKDSDF
LAFVNLWDYLKEQQKALSSAQFRKLCRSDYLNYLRVREWQDIYTQLRQVV
KELGIPVNSVAADYRSVHTAILTGLLSHIGQKDVEKQEFTGARNARFAIF
PGSGLFKKPPKWVMVAELVETSRLWGRIAARIEPEWIEPLAQHLVKHHYS
DPHWEKAQGAVMASEKVTLFGLPIVTERKINYGPIDPLLCRELFIRHGLV
EGDWQTRHAFFRMNLKLLAEVEELEHKSRRRDILVDDETLFNFYDQRIGR
DVISARHFDSWWKQASQTKPELLNFEKTMLIKEGANKVNPLDYPNFWYQG
ELKLRLSYQFEPGTDADGVTVHIPLPILNQIHEQGFDWQIPGIRRELVIA
LIKSLPKPVRRNFVPAPNYADAFLARVTPLETGLLEALERELRRMTGVTV
SRDSWQLDQVPDHLKITFRVLDDKNRILREGKDLAALKLQLQEKVQETLS
AVADDGIEQNNLHIWSFGDLPICYEQRRGGYEVKAYPALVDEKDSVAIRL
FDTESQQQQAMWQGTRRLLLLNIPSPIKYLHEKLPNKSKLGLYFNTYGNV
MDLIDDCIACGVDKLVAQHGGPAWQEADFARLQEKVRAELNDTVVDIAKQ
VEQILTLVFSINKRLKGRIDISLALALSDIKAQLAGLIYRGFVTSNGWKR
LPDTLRYLKAIERRLEKLAVDPHRDRAQMLRIEHVQQVWQQWLNKLPPKR
QQDEEVKEVRWMIEELRVSLFAQQLGTPYPVSDKRILQTIEQLSV
>YPTB0297 hupA, DNA-binding protein HU-alpha
MNKTQLIDVIADKADLSKVQAKAALESTLAAITESLKEGDPVQLVGFGTF
KVNHRNERTGRNPQTGKEIKIAAANVPAFVSGKALKDAVKS
>YPTB0962 hupB, DNA-binding protein HU-beta, NS1 (HU-1)
MNKSQLIDKIAAGADISKAAAGRALDAIITSVTESLKEGDDVALVGFGTF
AVRERSARTGRNPQTGKEISIPAAKVPGFRAGKGLKDAVN
>YPTB2335 ihfA, integration host factor alpha-subunit
MALTKAEMSEHLFEKLGLSKRDAKDLVELFFEEVRRALENGEQVKLSGFG
NFDLRDKNQRPGRNPKTGEDIPITARRVVTFRPGQKLKSRVESATPKE
>YPTB1418 ihfB, integration host factor beta-subunit
MTKSELIERLAGQQSHVPAKVVEDAVKEMLEHMAGTLAEGERIEIRGFGS
FSLHYRAPRVGRNPKTGDKVELEGKYVPHFKPGKELRDRANIYG
>YPTB3236 insA, Insertion sequence protein
MAKVDVKCPFCEQFHPVKKHGPGRTGHQRYRCQACRRSFQLEYEYRACYP
GMKEQIVDLAMNNAGIRDTARALHISINAVMRTLKNSRRSV
>YPTB3242 insA, Insertion sequence protein.
MAKVDVKCPFCEQFHPVKKHGPGRTGHQRYRCQACRRSFQLEYEYRACHP
GMKEQIVDLAMNNAGIRDTARALHISINAVMRTLKNSHRSV
>YPTB3255 insA, Insertion element protein
MACINVHCPRCDSALVCRHGQNPKGQSRFRCRECRSVFQLTYTYQARKPG
VKGQIVDMAFNGAGVWDMARTLKIGINTVIRTLKNSC
>YPTB3162 int, Putative phage integrase.
MKLNARQVETAKPKDKAYKLADGGGLYLLVNTNGSRYWRLKYRFAGKEKL
LAVGVYPDVSLAVARVKRDEAKKIVAGGGDPSQNKQQEKLARQGEATNTF
EAITREWYQRRYDRWSESYRLEMMSTFESDVFPYIGYRPIKEIKPLELMA
VLSKLEKRGATEKMRKVRQRCGEVWKYAIITGRAEYNPAPDLASAFAPHK
REHYPHLTINEIPEFLSSLASYSGSMLVKLAMRLLILTGTRPGELRQAEW
AEFDFDNALWEIPAVRMKMRRPHMVPLPDQAITILKQIQPISGRYQFVFP
GRIQHSKPISEMTLNVLIRRIGYGGRATGHGFRHTMSTILHEQGFNTAWI
ETQLAHVDKNSIRGTYNHAQYLDGRREMLQWYADYMDSLENGENVIHGRF
GKRA
>YPTB2711 ligA, DNA ligase
MESIIQQINQLRTSLRHHEHQYHVLDAPEIPDAEYDRMMQQLRDLEAQHP
ELVTNDSPTQRVGAAPLDAFEQVKHEVPMLSLDNVFDEESYLAFDKRVHD
RLKTAEPLTFCCELKLDGLAVSLLYENGELVRAATRGDGTTGENITANVR
TIRAIPLRLHGDNVPRRVEVRGEVFMPQAGFEQLNEEARRKGGKVFANPR
NAAAGSLRQLDPRITAKRPLTFFCYGVGLLDGGELPRSHIQCLMQFKAWG
LPVSERVKLCTGSDQVIAFYRQIEQDRAGLGFDIDGVVIKVDDLVLQEQL
GFVARAPRWATAFKFPAQEQITQVREVEFQVGRTGAITPVARLEPVQVAG
VIVSNATLHNADEIERLGLRIGDTVIVRRAGDVIPQVVGVVMEQRPDDTK
EITFPSQCPVCGSDIERVEGEAVARCTGGLFCAAQRKEALKHFVSRRALD
VDGMGDKIIEQLVEKQYVENPADLFQLTAGKLTGLDRMGPKSAQNLIAAL
EKAKQTTFARFLYALGIREVGEATAANLAAHFRTLDNLRAADIETLKSVP
DVGEVVAKHVMNFLSEEHNQKVIEELEKVVSWPEPQQIVVEEIDSPFAGK
TVVLTGSLTILSRDEAKDRLTALGAKVSGSVSKKTHLVIAGEAAGSKLAK
AQELGIKVIDEAEMIRLLGE
>YPTB2443 mfd, transcription-repair coupling factor
MSQQYRYSLPERRGDTRQLGQLTGSACAVECAEIIERHDGPVMLITPDMQ
TALRLRDEIQQFSPQPVSTLSDWETLPYDSFSPHQDIISARLSCLYHLPA
MKRGVIILPINTLMQRVCPHEFLHGHALVMKKGQHLSRDKLRAQLEQAGY
RSVEQVMEHGEFATRGALLDLYPMGSNEPYRIDFFDDDIDSLRVFDVDSQ
RTLVEVEQINLLPAHEFPIDKAAIELFRSQWREQFEVRRDNEHIYQQVSK
GIWPAGIEYWQPLFFSQQLPTLFSYLPENTLLVNTGDLESSAERFWQDVN
QRFESRRVDPMRPLLAPESLWLRVDALFNELKEWPRVQLKTEAQPAKAAN
TNLCYQPLPDLSVQAQQKAPLDNLRRFIESFHGSVVFSVESEGRRETLQD
LLARIKLSPTLITTLSQVANPGHYLMVGASERGFLDTDKQLALICESDLL
GERVSRRRQDNRRTINTDTLIRNLAELRPGQPVVHLEHGVGRYLGLTTLE
AGGIKAEYLILTYAGEDKLYVPVSSLHLISRYSGGADDNAPLHRLGSDVW
SRARQKAAEKVRDVAAELLDIYAQRAVKSGFKFKHDREQYQLFCQSFPFE
TTPDQEQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVTNNK
QVAVLVPTTLLAQQHFDNFRDRFATWPVRIEMLSRFRSAKEQQVILEQAA
EGKIDILIGTHKLLQSDLHWHDLGLLIVDEEHRFGVRHKERIKAMRADVD
ILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSLVIRE
AILREILRGGQVYYLYNDVENIEKVTQKLAELVPEARIAIGHGQMRERDL
ERVMNDFHHQRFNVLVCTTIIETGIDIPSANTIIIERADHLGLAQLHQLR
GRVGRSHHQAYAYLLTPNPKAMSTDAKKRLEAIASLEDLGAGFALATHDL
EIRGAGELLGEDQSGQMTTIGFSLYMELLESAVDALKEGREPSLEDLTSN
QTEIEMRMPVLLPEDFISDVNIRLSFYKRIASARNETELDELKVELIDRF
GKLPDPARYLLHTAELRQQAQKLGIKRIEGNERGGFIEFGENNKVDPVYL
IGLLQRQPQIYRLEGPTKLKFMQDLSDRAQRLKFITELLAAFAQHRIA
>YPTB3037 mutH, DNA mismatch repair protein
MSVYSLPPAPPSDEHQLFQRAQALSGFTLGELATRAQWVIPADLKRVKGW
VGMLLEFYLGASAGSKPEQDFADIGIELKTIPISAQGKPLETTFVCVAPL
TGNSGVTWENSHVRHKLARVLWVPVEGERHIPLAERRVGAPLLWSPNVEE
EELLRRDWEELMDLIVLGKVESITARHGQVLQLRPKAANSRALTEAIGEF
GQPIMTLPRGFYLKKTLTAPMLARHFLL
>YPTB0423 mutL, DNA mismatch repair protein
MPIQILPPQLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGG
AKLIRIRDNGCGISKDDLALALARHATSKISSLEDLEAILSMGFRGEALA
SISSVSRLILTSRTAEQSEAWQAYAEGRDMAVTIKPAAHPVGSTLEVLDL
FYNTPARRKFMRTEKTEFGHIDEVVRRIALARFDVAINLNHNGKLIRQYR
AAPDPAQHERRLASICGPAFLQHALAIAWQHGDLNIHGWVADPAASHTLS
EMQYCYVNNRMMRDRLINHAIRQAYQDRLNDAQQPAYVLYLDIDPHQVDV
NVHPAKHEVRFHQARLVHDFIYQAVTAVLQQTNAPILNISEEGEVDAPRW
QQENRVAAGTNKYAQPEAAKSSAAEQAVARERSSARERAAPAYKEDHPYQ
KQQGELYRQLLQPSAAAKPATSPAAIPASSVSSPSIPVQRITQAEEPLHG
DNYSFGRVLTVFPPCYALIEYQGGVALLSLAVAERWLKQAQLSPPEEGLR
PQPLLIPLKITLDKNEIAACQNHEKLLITMGIELSVEQGRATLRAVSLPL
RQQNLQKLIPELLGYLSQHEEISPDTLATWLARHLGSEHEVWNVSQAIQL
LTEVERLCPQLVQSPPAGLLQPIDIKAALATLTHE
>YPTB0049 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETSRRGIEPYLVGQTILYAVVRNARLRWPVSDEILTLSDQPVL
SVQRRAKYLLLELPKGWIIIHLGMSGSLRVLSEETAAEKHDHVDLVVSNG
KILRYTDPRRFGAWLWAKDLETSNVLAHLGPEPLSDEFTAQYLFDKSRNK
RTLIKPWLMDNKVVVGVGNIYASESLFAAGILPDRAAGSLTDAESVLLVA
TIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRAGEPCRQCGHP
IEIAKHGQRSTFFCRHCQH
>YPTB0778 mutS, methyl-directed mismatch repair, recognize exocyclic adducts of guanosine
MKNNDKLDSHTPMMQQYLRLKAQHPEILLFYRMGDFYELFYSDAKRASQL
LDISLTKRGASAGEPIPMAGVPYHSIENYLAKLVQLGESAAICEQIGDPA
TSKGPVERKVVRIVTPGTISDEALLQERQDNLLAAIWQDAKGFGYATLDI
SSGRFRVAEPADLETMAAELQRTNPAELLYPENFEPMSLIEHRHGLRRRP
LWEFELDTAKQQLNLQFGTRDLIGFGVEQAHLALRAAGCLLQYVKDTQRT
SLPHIRGLTMERQQDGIIMDAATRRNLELTQNLSGGSENTLAAILDCSVT
PMGSRMLKRWLHMPIRDIRVLTDRQQAIGGLQDIAAELQTPLRQVGDLER
ILARLALRTARPRDLARMRHAFQQLPEIHRLLQPIDVPHVQNLLSQVGQF
DELQDLLERAIVETPPVLVRDGGVIASGYNAELDEWRALADGATDYLDRL
EIREREKLGLDTLKVGFNGVHGYYIQVSRGQSHLVPIHYVRRQTLKNAER
YIIPELKEYEDKVLTSKGKALAIEKGLYEEIFDLLLPHLPELQLSANALA
ELDVLANLAERAETLNYSCPTLSDKPGIKIMGGRHPVVEQVLKEPFISNP
LTLSPQRRMLIITGPNMGGKSTYMRQTALIVLLAHLGSYVPADQATIGPI
DRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLVLMDEIGRGTS
TYDGLSLAWACAENLASRIKAMTLFATHYFELTTLPEKMEGVANVHLDAL
EHGETIAFMHSVQEGAASKSYGLAVAALAGVPRDVIKRARQKLKELESLS
NNAAASTIDGSQMTLLNEEIPPAVEALEALDPDSLSPRQALEWIYRLKNM
V
>YPTB0698 mutT, 7,8-dihydro-8-oxoguanine-triphosphatase, prefers dGTP
MKHLQIAVGIIRNSQQEIFITQRAADSHMAGFWEFPGGKIEQGETPEIAL
KRELLEETGIVVQQATLLTMLEHTFSDRIVTLHFYRVEVWDGEPFGREGQ
PMRWVLQSELRADEFPPANAAIIELLTK
>YPTB3224 mutY, A/G-specific adenine glycosylase.
MQAQQFAHVVLDWYQHFGRKTLPWQLDKTPYQVWLSEVMLQQTQVATVIP
YFQRFMLRFPDIQALAAAPLDEVLHLWTGLGYYARARNLHKAAQMVVEHH
QGEFPTTFDQILALPGIGRSTAGAILSLSLGQHFPILDGNVKRVLARCYA
VDGWPGKKEVEGRLWQISEDVTPANRVGQFNQAMMDLGAMVCTRSKPKCE
LCPLNIGCMAYANHSWARYPGKKPKQTLPEKTAWFLLMQNGSQVWLEQRP
PVGLWGGLFCFPQFAEQEELIHWLQKQGIPANETQQLTAFRHTFSHFHLD
IVPIWLNTASVRGCMDDGAGLWYNLAQPPSVGLAAPVERLLHQLLKDPLA
KDELTQQQLTKQSPTQPALFD
>YPTB0295 nfi, endonuclease V
MFDTKALQAEQRQRASEISLHDGIDNQFVRFIAGADVGFEQHGEITRAAI
AILRYPSLALVEYQVARVATSLPYIPGLLSFREYPALLAAWAQLQQRPDL
ILVDGQGIAHPRRLGVASHFGLLVDVPTIGVAKSRLCGDFLPLHQDVGAV
QPLFDNDEQLGWVWRSKIRCNPLFISPGHRVSVGSALAWVQRCMAGYRLP
EPTRWADAIASNRPQFQRWLRKNPDFLGKRRDMI
>YPTB1337 nfo, endonuclease IV
MKFVGAHVSAAGGVDQAVIRAHELEATAFALFTKNQRQWRAAPLAEDVIE
KFKLACEKYGYTSAQILPHDSYLINLGHPVTEALEKSREAFIDELVRCQQ
LGLSLLNFHPGSHLLQIDEDQCLARIAESINIALDATEGVTAVIENTAGQ
GSNLGFKFEHLAAIIERVEDKSRVGVCIDTCHAFAAGYDLRTEEDCEHTF
AALGKIVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIGKTVFSYIMRD
SRFDNIPLILETVNMDIWAEEIAWLKSQAEIEPSL
>YPTB2160 nth, endonuclease III
MNKEKRVTILTRLRDNNPHPTTELVYSTPFELLISVLLSAQATDVSVNKA
TARLYPVANTPQAILDLGVDGLKEYIKTIGLYNTKAENVIKTCRILLEKH
QGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTGF
APGSNVDQVEEKLLKVVPAEFKLDCHHWLILHGRYTCIARKPRCGSCIIE
DLCEFKEKVYPEH
>YPTB2037 nudB, putative dATP pyrophosphohydrolase
MNYKRPESVLVVIYAKSSGRVLMLQRRDDPDFWQSVTGSLEEGEAPLQTA
QREVKEEVGIDILGENLVLLDCQRCVEFELFAHLRRRYAPGITRNKEHWF
CLALPEERDIVITEHLAYQWLDAAEAAVLTKSWSNQQAIEEYVLYSV
>YPTB2093 nudG, putative pyrophosphohydrolase
MIDVVAAIIERDGKILLAQRDGQSDQAGLWEFPGGKVEAGETQPQALIRE
LAEELGIEATVAGYIATNQWVAANNRIRLHAWYVNHFSGEPVRHCHAAFI
WLTPLEAYRYSLAPADIPLLDAFIAQRQ
>YPTB2221 ogt, putative methylated-DNA--protein-cysteine methyltransferase
MKTFFIDRMATPQGELLLIADEENQLRAIDWTDHHDRLMKLLRNHYGADT
FTLVEKRNPGGLSESMQRYFAGELSIIDTLPVKTAGTDFQRQVWQELRKI
PCGETISYGELAKRINRPTASRAVGMANGLNPISIVVPCHRVIGSQGALT
GYAGGVDRKRWLLVHEGYLLGC
>YPTB3392 parC, DNA topoisomerase IV subunit A
MSDLTHDGAERLPLHTFTENAYLNYSMYVIMDRALPFIGDGLKPVQRRIV
YAMSELGLNNSAKFKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSYR
YPLVDGQGNWGAPDDPKSFAAMRYTESRLSKYAEVLLGELAQGTVDWVPN
FDGTMQEPKMLPARLPNILLNGTTGIAVGMATDIPPHNVREIAQAVLALI
DKPTTSLDELLEFVQGPDFPTEAEIITPRDDIRKIYQNGRGSVRMRAVWK
KEDGSAVITALPHQVSGAKVLEQIANQMRAKKLPMVEDLRDESDHENPTR
LVIVPRTNRVDLDQVMSHLFATTDLERSYRINMNMIGLDNRPSVKGLLEI
LTEWLVFRRQTVRNRLNFRLEKVLKRLHILEGLLIAFLNIDEVIHIIRTE
DDPKPLLMQRFSISETQAEAILELKLRHLAKLEEVKIRGEQDELAKERDQ
LQALLASERKLNTLIKKEIQADAAAYGDDRRSPLTERGEAKAMSEHDIVP
SEPVTIVLSEMGWVRSAKGHDIDPSGLSYKAGDSFRAAARGMSNQPVVFI
DSTGRSYALDPLTLPSARGQGEPLTGKLTPPPGATIEHVLMAPDSQKLLM
ASDAGYGFVCTFNDLVAKNRAGKTMITLPENAKVLPPLEIYGPDDMLLSI
TAVGRMLMFPVADLPELSKGKGNKIVSIPAAQAAAGEDRLAWLFVLPPQT
SITLHFGKRKLTLRPEDLQKFRAERGRKGSPLPRGLQRIDRIDVDAPPRA
IATESEE
>YPTB3395 parE, topoisomerase IV subunit B
MTESSYNADAIEVLSGLEPVRRRPGMYTDTSRPNHLGQEVIDNSVDEALA
GHARRIDVILHADQSLEVIDDGRGMPVDIHPEEGVPAVELILCRLHAGGK
FSNKNYQFSGGLHGVGISVVNALSKRVEVTVRRDSQIYSIAFENGDKVQD
LQVIGTCGKRNTGTSVHFWPDVSFFDSPRFSVSRLSHLLKAKAVLCPGVE
IVFKDQVNNTEQRWCYADGLTDYLMEAVNGFITLPEAPFVGSFAGDTEAI
DWALLWLPEGGELLTESYVNLIPTMQGGTHVNGLRQGLLDAMRDFCEYRN
ILPRGVKLSADDIWERCAYVLSVKMQDPQFAGQTKERLSSRQCAAFVSGV
VKDAFSLWLNQNVQAAEQLAELAISSAQRRMRAAKKVVRKKLTSGPALPG
KLADCTSQDLNLTELFLVEGDSAGGSAKQARDREYQAIMPLKGKILNTWE
VSSDEVLASQEVHDISVAIGIDPDSEDLSQLRYGKVCILADADSDGLHIA
TLLCALFVRHFRALVRNGHVYVAMPPLYRIDLGKEVFYALDEEEKAGVLE
QLKRKRGKPNVQRFKGLGEMNPLQLRETTLDPNTRRLVQLTISDDDIDHT
LAVMDMLLAKKRSEDRRNWLQEKGDTAEIEV
>YPTB2913 phrB, putative deoxyribodipyrimidine photolyase
MSTHLVWFRNDLRVTDNLALHAACQDPQASVIAVFIATPVQWAAHGMAPR
QAAFLRQNLQHLQAALAARGIPLHYHQCDDFQASNTWLVDFCQQQQVDSL
FYSQQYELNERLRDDALAVQLSGRAITCQSFHDSVLLAPGTVLTGNNEMY
KVFTPFRRAFIQRLLMSDNHCVPAPKARHAPPVLLSPLPFDYPQQSVDSQ
LFPAGEDAALQRLRRFCREQVQDYRQYRDLPAVPGTSCLSPYLVLGVLSP
RQCFNRLWAESPEMLENADSGAFTWLNELIWREFYRHLLVAYPRLCQHHP
FIGWTDGLVWNRSESQLKAWQQGQTGYPIVDAAMRQMNETGWMHNRLRMI
SASFLVKDLLIDWRQGERYFMSQLVDGDLAANNGGWQWAASTGTDAAPYF
RIFNPTTQGERFDKDGVFIRRWLPELAAVPDSDIHQPWRWAERQQQHLDY
PVPLVDHKQARLATLAAFEAAKRDSTRIPNRKEPSCY
>YPTB0018 polA, DNA polymerase A
MAQIAENPLILVDGSSYLYRAYHAFPPLTNGSGEPTGAMYGVLNMLRSLL
LQYRPSHVAVVFDAKGKTFRDELFAEYKSHRPPMPDDLRVQIEPLHQMVK
AMGLPLLVVSGVEADDVIGTLAREAEKAGHSVLISTGDKDMAQLVTPNIT
LINTMNNTILGPQDVCDKYGVPPELIIDFLALMGDSSDNIPGVPGVGEKT
AQALLQGLGGLDTLFSNLDKISTLTFRGAKTMSAKLEQNKDVAYLSYKLA
TIKTDVELDVTCDELTVSPPDDKQLHQLFSRYEFKRWLADVEAGKWLDSK
KDRPTGQTSSQSFVAADTAPTAEVTAVLSQENYQTILDEKALADWIERLK
AAEVFAFDTETDGLDTLSCNLIGMSFAVAPGEAAYLPLAHDYLDAPPQLD
RDWVLATLKPLLEDDKALKVGQNLKFDKSMLARYGIDLKGIAFDTMLESY
VLDSVAGRHDMDSLAERYLNHKTITFEEIAGKGKNQLTFNQIALEQAGPY
AAEDADVTLQLHLVLWPKLQQSEGLKRVFQEIEMPLLPILSRIERTGVLI
DQNILAAHSKELTIRLDELEKQAHELAEEPFNLASPKQLQAILYEKQKLP
ILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLM
INPVSGRVHTSYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPK
GYCIMAADYSQIELRIMAHLSQDNGLLAAFAAGQDIHRATAAEVFGSPLE
KVTTEQRRSAKAINFGLIYGMSAFGLARQLGIPRGEAQRYMDLYFERYPG
VLEYMERTRKQAAEQGYVTTLDGRRLYLPDIHSRNANRRKAAEREAINAP
MQGTAADIIKRAMIAVDGWLQQEPEPLVRVIMQVHDELVFEVHESVLQSA
EQKIRELMEKSMQLAVPLKVDVGVGANWDQAH
>YPTB0659 polB, DNA polymerase II and and 3'--> 5' exonuclease
MGQTRQGFLLTRHWRDTPAGTEVEFWLATDEGPQHVRLPPQPSVAFIPAE
QQQRAETVLRAERHWQLRPLALTDFHQRPVLGLYCTQHRQLIRLEKRLRE
SGVNVYEGDIRPPERFLMERFITAPVWFSGQENDHGPLLNTQLKPADDYR
PTLKLVSLDIETSEHGELYCIGLEGCGQRQVYMLGPPNGETTGTPLDFNL
EYVASRPLLLEKLNQWLAVHDPDAIIGWNLVQFDLRVLQKHADRYQIPLR
FGRGGNLLEWREHGFKQGHFFASAAGRLIIDGIEALKSATWNFPSFSLES
VSQTLLGEGKASDSPYQRMDEINQRFAHDKPALARYNLKDCELVTRIFAK
TELLSFLLERSTVTGLAADRSGGSVAAFTHLYLPRMHRIGYVAPNLGELP
EEHSPGGFVMDSQPGLYDSVLVLDYKSLYPSIIRTFLIDPVGLVAGMQQP
DIQHSVPGFRGAWFSREKHCLPAIVNQIWQGREAAKRQQNKPLSQALKII
MNAFYGVLGSSGCRFFDPRLASSITLRGHEIMRQTRELIEAQGYQVIYGD
TDSTFVWLKSAHSDEQATRIGNELVQLVNQWWQNHIQQNFNLPCALELEF
EIHYRRFLMPTIRGAEQGSKKRYAGLISTPTGDQMVYKGLETVRTDWTPL
AQQFQRELYLRIFQQQPYQDYVRDYVARTLNGELDEQLVYRKRLRRRLDD
YQRNVPPHARAARLADEFNRKLGRPLQYQNGGWISYVMTTAGPEPLETRQ
SPIDYDHYLTRQLQPVADAILPFTQDDFTTLITGQMGLF
>YPTB0101 priA, primosomal protein n
MSVVQVALPVPLARTFDYRLDSAMACPVVGARVSVPFGKRKAIGIVVGLS
DTSTFPLEQLKTIDAILDNHSLFPPSLWRILCWATEYYHYPIGEVLFHAL
PILLRQGRPAQSAPLWQWFVTEQGRATPPESLKRAPKQQQALAALLQKPV
YRHQVNEMALTESALQALRSKGLIDLRAQEATTTDWRHSFSVLGERLRLN
TEQATAVGAIRSEDNQFAAWLLAGVTGSGKTEVYLSVLENILAQGRQALI
LVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSVWLRARSGEAAIV
IGTRSALFTPFSRLGVIIIDEEHDSSYKQQEGWRYHARDLAVFRAREEGI
PIVMGTATPALETLHNVQMGKYRQLTLTKRAGSAKPAAQHLLDLKGLPLK
VGLSQPLLKRMKTHLQAGNQVILFLNRRGYAPALLCHECGWIAECQRCDH
YYTLHQNHRQLRCHHCDSQRPVPQQCPKCGSTHLVSVGVGTEQLENELAP
LFPETPITRIDRDTTSRKGSLEQHLADVHQGGARILIGTQMLAKGHHFPD
VTLVALLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHH
PEHPLLQILLQQGYDAFAKQALEERKSVFLPPYTSHIIVRSEDHDNQQSA
LFLQQLRNLLEASPLKDEALWIMGPVPALQAKRGGRFRWQLLLQHPSRQL
LQRLIKTSQPLISTLPQARKVKWTIDVDPIDS
>YPTB0439 priB, primosomal replication protein n
MVTTNRLVLSGTVCKTPVRKVSPSGIPHCQFVLEHRSTQQEAGFSRQTWC
RMPIVVSGQQSQALTHSITVGSQLTVEGFISCHQGRNGLNKLVLHAEQIE
FIDSGD
>YPTB0046 radC, putative DNA repair protein
MDEWYGQVAPREKLLKYGAAVLTDAELLAIFLRTGIPGMHVMKMAEYLIE
TFGSLHGLISADYQTLCAHKGIGASKYSQIQAIGELACRCFSSHLMRESV
LLNPGITQKFLQNILSHREREIFLVVFLDNQHRVIRHEEMFTGTISSVEV
HPREIVREALKVNAAALILAHNHPSGKAEPSQADRLITTQVIKACSLLDI
RVLDHLVVGRGECVSFAERGWL
>YPTB0658 rapA, ATPase associated with RNA polymerase
MPFTLGQRWISDTESELGLGTVVAIDVRMITLLFPATGENRLYARNDSPI
TRVMFNPSDTITHHEGWQLKVEEVTQENGLITYIGTRLDTEETGVAMREV
LLDSKLTFSKPQDRLFAGQIDRMDRFALRFRARKYQSEQFRLPWSGLRGI
RASLIPHQLHIAYEVGQRHAPRVLLADEVGLGKTIEAGMIIHQQLLAGRA
ERVLIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSEALLDSSNPFDTEQ
MVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFVNEQQKYR
PIADAVTLLLGGERLTDDKLNLLGELIDEQDIEPLLKAANSQSEDSEAAR
QELVTMLMDRHGTSRVLFRNTRNGVKGFPHRVLHQIKLPLPTQYQTAIKV
SGIMGAKKTLDARAKDMLYPEQIYQEFEGENATWWNFDPRVEWLLNYLVA
NRGEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSLIERDRAAAYF
ASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI
GQNREIQIMVPYLEDTAQAILVRWYHEGLDAFEHTCPTGRTIYDSSYQEL
ISYLATPSEQEGLDEFIHTCRQQHEGLKLQLEQGRDRLLEMHSNGGEHGQ
ELAQSIAEQDNDINLVSFALNLFDIVGINQEDRSDNLIVLTPSDHMLVPD
FPGLPPDGCTVTFDREQALSREDAQFVSWEHPIIRNGLDLILSGDTGSCA
VSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPVRMLMDRNGT
NLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHTMLQQAEALVEAQAQ
ALIETAKREADDKLSTELARLEALKAVNPNIRDDEIEALEHNRKMVLENL
NQAGWRLDAIRLVVVTHQ
>YPTB0913 rdgC, putative exonuclease involved in removal of stalled replication fork
MLWFKNLMVYRLSREVSLSADEMEKQLSAFSFTPCGSQDMAKTGWVSPMG
SHSDALTHTVNGQIVICARKEEKILPSPVIKQELQDKIERLEGEQHRKLK
KTEKDSLKDEVLHSLLPRAFSRFNQTFLWIDTVNDLIMVDAASAKRAEDT
LALLRKSLGSLPVVPLTLENPIELTLTEWVRSKTLPAGFALMDEAELKAI
LEDGGVIRCKKQDLFSDEIAVHIEAGKLVTKLALDWQERIQLVLSDDGSL
KRLKFADTLRDQNEDIDREDFAQRFDADFILMTSELAALIKNLIEALGGE
AQH
>YPTB0823 recA, DNA strand exchange and recombination protein with protease and nuclease activity
MAIDENKQKALAAALGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDI
ALGAGGLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHAL
DPIYAKKLGVDIDNLLCSQPDTGEQALEICDALTRSGAVDVIIVDSVAAL
TPKAEIEGEIGDSHMGLAARMMSQAMRKLAGNLKNANTLLIFINQIRMKI
GVMFGNPETTTGGNALKFYASVRLDIRRIGAVKDGDVVVGSETRVKVVKN
KIAAPFKQAEFQILYGEGININGELVDLGVKHKLIEKAGAWYSYNGDKIG
QGKANASNYLKENPAIAAELDKKLREMLLNGGNGEQPVAAATAEFADGVD
ETNEEF
>YPTB3025 recB, exodeoxyribonuclease V beta chain
MTPTTPQRLEPLALPLYGERLIEASAGTGKTFTIGVLYLRLLLGLGGDAA
FRRPLMVEEILVVTFTEAATEELRGRIRDNIHGLRIACVRGVSDDPMYQA
LLAEITDWAVAAAQLLAAERQMDEAAIYTIHGFCQRMLANNAFESGILFE
QTLVQDELPLWRQACADFWRRHCYPLPLVIARAVSQEWSGPEALLSDLSA
YLQGETPKFRQAPGDDETILSRHQHVVTQIDALKAEWRLAAPELEALISR
SGVDKRSYSSKHLPNWLEKVGLWAEQETEDYQLPKELEKFRQSVLLEKTK
KGAAPQHTLFSAIDSIFEQPLTLRDLILARAISEIRFSVQQEKRQRAELG
FDDLLSKLDAALQQSGGELLAQSIRTRYPVAMIDEFQDTDPQQYRIFHTV
YGGQEACALLLIGDPKQAIYAFRGADIFTYIRARSEVSAHYTLETNWRSS
FPMVQSVNRLFSLVNTPFLFEQIPFINVAAAKKNHDLSFEIKGEKQPALH
FWLQPGDGVGVSEYQQVMARQCAAQIRDWLTAGQQGQAELLTTKGPKPVQ
ASDITILVRSRAEAALIRDALSALAIPSVYLSNRDSVFETTEAKDLLWLL
QAVLAPEQERALRSAMATGILGLDARMLDALNHDERAWDALVDEFDHYRQ
HWQRRGVLPMLREMMARRHLAENLLATPGGERRLTDLLHLGELLQEAASQ
LDSEHALIRWLAQQIAQPNPQSDSQQLRLESDRHLVRVVTIHKSKGLEYP
LVWLPFIGNFRQQQNVLYHDRHSFEALLDLNADEESQALAEEERLAEDLR
LLYVALTRSVYHCSVGIAPLIKGGRKKQGESDMHRSALGYLVQHGQPGDA
HVLSEKLTELARSSNGDICVSPVEPPDDKPWQPQPEALPELTARHFTRKM
QDYWRVTSYSGLQQSGSTKKLYGSATGDVSQALGAPLQVLLPRLDIDAVG
EQAVVTEDDHLTPHTFPRGAAPGTFLHDLLEPLDFSQPIELAWLSERLQQ
QGFSEQWAPVLHQWLNDIVQTPLTDTGATLAGLSPERKQAELQFYLPIDS
LLRAEVLDRLIKQYDPLSRQCPVLDFQQVRGMLKGFIDLVFCWQGQYYLL
DYKSNWLGEDSRAYTVEAMTQAMAEHRYDLQYQLYTLALHRYLRHRLADY
DYQRHFGGVIYLFLRGVDQQHSGHGIFNCRPEQKLIEEMDRLFSGTIGSN
ATASDKSGSNVIHSGERASR
>YPTB3027 recC, exodeoxyribonuclease V gamma chain
MFTVYHSNQLDLLKALTTALIEREPLDNPFQQEVVLVQSPGMAQWLQMQL
AQQFSIAANIVFPLPATFIWDMFTRVLPDIPKESAFSKEAMTWKLMWLLP
DLLENPLFSPMKRYLSDDGDRRKIHQLAARVADLFDQYLVYRPEWLESWE
RGQLIEGLDDAQQWQALLWVELTRYTRQLEQPEWHRANLYQRFIHQLLKS
DVCPQGLPKRVFICGISALPPIYLQALQALGKHIDIHLMFTNPCRYFWGD
IQDYAFLAKLQSRKRRHYRESIELSLFRHPQQAEQLFNTDGEQNLSNPLL
ASWGRLGRDHMYLLSQIDEIQEVHAFVDIEPDNLLHGIQHDMLELEDHAV
IGTTPETLARSDQKRRLDLDDRSLSFHACHSRQREVEVLQDHLLGLLAAD
PELTPRDIIVMVADIDSYTPYIQAAFGNAPSERYLPFAISDRKASQAHPA
LHAFITLLDLPQSRFTAEQVLALLEVPALATKFGITEDGLRRLRQWVGES
GIRWGLDDDNVRELSLPATGQHTWRFGLTRMLLGYAMDSTAGDWQGILPY
DESSGLAAELAGQLADMLMHLSQWRQQLGQPRELSEWLPICRQLLDTFFD
QDNDTEAALVLIEQQWQKVIGYGIAAQYPDVVPLNLLRDELAARLDNERI
SQRFLAGPINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPQGFDLMAKK
VRRGDRSRRDDDRYLFLEALLSAQQQLYISYIGRSIQDNSKRYPSVLVSE
LIEYVAQSYHLPGDEKLSADDSAQRVTQHLLCWHARMPFSAENFIKNSEL
QSYAAEWLPSAESKGHAHPNFNQPLQAEPLAEITLDELVRFYRHPVRAFF
QLRLGVNFVIEETELPDEEPFTLDNLSRYQFNTQLLNALINEDDINSVFA
RARAAGVLPYGSFGELYWESQQDEMVPLAEQIRSERKENHSIELNIEFAD
ITVTGWIHQVQDDGLVRWRPSILTAVDGLLLWLEHLVYCSAGGEGESRIY
GRKGTAWRYAPMAADEARPYLQQLIKGYQQGLCEPLMLLSKSGWAWLSQC
FDRESGQILWDEETQGKARMKLLQVWQGDQRVTGEGEDHYIQRVCRRMDN
QHLDIILHETERYLLPIARHNKA
>YPTB3024 recD, exodeoxyribonuclease V alpha chain
MMTLLAQAARDRLLRPLDVQFSRMIAGDDDPRLQLAAAILSAEVGAGHVC
LPLRYLQPELLFGGRQPDLSLALWQAAGSPDKAQWLQALQNAPVVSDGSQ
PTPLVLQQERLYLQRMWQYEGDVVQFIASDSVFINRDSDFMTSKGIATSV
DESLLRETLDALFGCAGSEVDWQKVAAAVAATRRISVISGGPGTGKTTTV
AKLLTALIRLSQGQRLRIKLAAPTGKAAARLTESLGKAIRQFSLTDDERK
LFPDQASTLHRLLGVQPNSQRLRYHRGNPLNLDVLVVDEASMVDLPMMAR
LIAALPAKAKVIFLGDRDQLASVEAGAVLGDICRFAELGYSEQRAQQLTQ
LTGYLLTNNALTSNVLTNKALANKAQPDETYSDSANVRDSLCLLRKSYRF
DEKSGIGQLALAVNAGEYRQALSVLNSAYSDVERFPLADEEDYQVLLEAC
AVGYQHYLERVAALAPAAEVLAAFGRYQLLCALRSGPFGVSGLNERIEQV
LHRKGFIIRPSGPSGRWYVGRPVMIELNDSALGLFNGDIGIALHDNEGEL
RVYFQLPDGNIKSVQPSRLPSHETAYAMTVHKSQGSEFEHTALVLPNTFM
PVLTRELVYTAITRARQHLTLYCSDAVLSHAIRTPTLRLSGLVDRLNTLN
RQ
>YPTB3941 recF, DNA metabolism protein
MSSCQCVCSIYRAILLAPLRLGSARHPLVHEVRSGGCALAARKWPATITP
LIRNKATLPSIIRISFMALTRLLIKDFRNIESADLALAAGFNFLVGPNGS
GKTSVLEAVYTLGHGRAFRSLQAGRVIRHECAEFVLHGRVDANEREASVG
LSKSRQGDTKVRIDGTDGHKVAELAQMLPMQLITPEGFTLLNGGPKFRRA
FLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVSRYTQIRAWDQEIIPL
AERISEWRAAYSDAIAADISATCALFLPEFALSFSFQRGWDKESDYGELL
ARQFERDRALTYTAVGPHKADFRIRADGTPVEDLLSRGQLKLLMCALRLA
QGEFLTRQSGRRCLYLLDDFASELDTGRRRLLAERLKATQAQVFVSAVSA
EQVADMVGEKGKMFRVEHGKIEVQPQD
>YPTB0033 recG, ATP-dependent DNA helicase
MKGRLLDAVPLSTLSGVGASQAGKLAKIGLETIQDLLLHLPLRYEDRTRL
YRIGDLLPGLSVTVEGEVLRSDISFGRRRMMTCQISDGSGVLTLRFFNFN
AAMKNSLSVGKHVIAYGEAKRGNNGPEIIHPEYRVHGENIGVELQESLTP
VYPTTEGIRQATLRKLIDQALAMLDTCVIAELLPIELSRSLISLPEAIHT
LHRPPADIQLADLEQGKHPAQRRLIMEELLAHNLSMLAVRAGAQSYRALP
LMAEEQLKQRFLAALPFTPTQAQQRVVAEIERDMTQSFPMMRLIQGDVGS
GKTLVAALAALRAIAHGKQVALMAPTELLAEQHATTFRQWLEPLGFSVGW
LAGKQKGKARLAQQEAVASGQVSMVIGTHAMFQEQVQFSGLALVIIDEQH
RFGVHQRLTLWEKGEEQGFHPHQLIMTATPIPRTLAMTAYADLDTSVIDE
LPPGRTPVTTVAIPDTRRSDVIQRVKNACLEEGRQAYWVCTLIEESELLE
AQAAEVTCEELKIALPEIKVGLVHGRMKGPEKQAIMLAFKQGELQLLVAT
TVIEVGVDVPNASLMIIDNPERLGLAQLHQLRGRVGRGAVASHCVLLYKT
PLSKTAQMRLQVLRDSNDGFVIAQRDLEIRGPGELLGTRQTGSAEFKVAD
LLRDQAMIPEVQRVARHLHQQYPEHAKALIERWLPERVRYTNA
>YPTB3165 recJ, Single-stranded-DNA-specific exonuclease
MTLKTQLRRREAADDSHLPAQLPPLLRRLYASRGVKDAQELERGVKGLLA
WQKLDGIDAGVTLLQQALADRRRIVIVGDFDADGATSTALAVLALRSMGG
SNLDYLVPNRFEDGYGLSPEVVEQVAARGAELIVTVDNGISSHAGVDLAH
AKGIQVLVTDHHLPGETLPAADAIINPNLAGCDFLSKSLAGVGVTFYLML
ALRARLRECGWFEQRTLAVPNLAELLDLVALGTVADVVPLDANNRILVHQ
GLSRIRAGKCRPGIRALLEVANRDARQLVANDLGFSLGPRLNAAGRLDDM
SIGVALLLSDDIAQARALAIDLDTLNQTRREIEQGMQVEALQLCDQLERT
SSELPYGIAMYHPEWHQGVVGILASRIKERFHRPVIAFAPAGEGLLKGSG
RSVAGLHMRDALERLDTLNPGLILKFGGHAMAAGLSLEEGKFDEFRQRFA
DLVGEWMDASQLEGVIWSDGELNGAELSLETAELLRDGGPWGQSFPEPTF
DGKFRILQQRLVGERHLKLMVEPLNGGPLLDGIAFNVDTTLWPDSSVREV
KLAYKLDINEYRGNRSVQLLVQHLWPY
>YPTB2888 recO, DNA repair protein
MDGWQRAFVLHGRPYSETSLMLDLFTEGEGRMRVLAKGARGRRSNLKGCL
QPFTPLLVRWSGRGEVKTLRSAEPVSLALPLSGSMLYSGLYVNELLSRVL
EHQTSYSALFFDYLHCLQALAGSDGSPEHALRQFELAMLANLGYGVDFLH
CAGSGQPVSDTMTYRYREEKGFIASLVVDHYSFTGRQLLALANREFPDAD
TLRAAKRFTRIALKPYLGGKPLKSRELFRQFVIKPPADPSP
>YPTB0994 recR, putative recombination protein, gap repair
MQTSPLLESLMEALRCLPGVGPKSAQRMAFQLLQRDRSGGMRLAQALTRA
MSEIGHCADCRTFTEQEHCTICLNPRRQQNGQICVVESPADIHAIEQTGQ
FGGRYFVLMGHLSPMDGIGPGDIGLDLLEKRLSTEAISEVILATNPTVEG
DATANYIGQMCGQYGILASRIAHGVPVGGELEMVDGTTLSHSLAGRNPIK
Y
>YPTB0163 rep, ATP-dependent DNA helicase Rep
MRLNPSQQEAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRQCGYQPKHI
AAVTFTNKAAREMKERVAQTLGRKEARGLMIATFHTLGLEIIKKEYVALG
MKSNFSLFDAQDQMGLLKDLTHKWLEDDKTLLQQLVSAISNWKNDLLDPA
AAAATARSERDKLFVHCYGLYDAHLKACNVLDFDDLISLPTLLLQKNLEV
RERWQNRLRYLLVDEYQDTNTSQYQMVKLLVGNRARFTVVGDDDQSIYSW
RGARPQNLVLLNEDFPALRVIKLEQNYRSSGRILKAANILIANNPHVFEK
KLFSELSYGDELKVITANNEDHEAERVVGELIAHHFVKKTQYSDYAILYR
GNHQSRLFEKLLMQNRIPYRISGGDSFFSRPEIKDLLAYLRVLTNQDDDS
AFLRIVNTPKREIGAATVQKLGEWANLRNKSLFRASFDLGLGEHLKGRGL
ESLQRFTHWMDGIIRLVEREPVAAVRDLIHGIDYESWLFETAPSPKAAEM
RMKNVNLLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMERGESDEELD
QVQLMTLHASKGLEFPYVFLVGMEEGLLPHQSSIDEDNVDEERRLAYVGI
TRAQRELFFTLCKERRQYGELIRPEPSRFLMELPQDDLNWENERKAVSPE
ERMQKGQSHLANLRAQLANAKKP
>pYptb0001 rep, plasmid replication protein
MESRSKLIVSQGNNLLEGAYNISRDEIRFLFLALTKIDSKIPQPDGLYTL
YPAEFEKMFGVNKAHIHQSLKNAASSLGKKPIYTYEYNEKKKRIDRVERF
WFSSIRYDESGVGADVTVRFSQDVALYLYELKKEFTQLKIDVIAKLTDSP
FALRLYSWLIKYKNLSRCINSEKVITTDAIDIEWMKERAGLAGKYKEYKF
FKRDILEPAINVINAKTDISVLWEPIKHGRNIVSIKFSYVEEKNSLGCKP
LRPRLPRRPKAIKGSAMEGEWASKCISIMSEFKKSLIAYDPNEKIAVSDL
KKWVHWCEIIGDKYQMKVINAEIKERTK
>YPTB0202 reqQ, ATP-dependent DNA helicase
MSTAAVINRELLAVQVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTG
GGKSLCYQIPALVTDGLTLVVSPLISLMKDQVDQLLAYGVGAGCLNSSQT
REQQLAVMDGCRSGQIKLLYIAPERLVMESFLDQLYQWRPALLAVDEAHC
ISQWGHDFRPEYRALGQLKQRFPDLPVIALTATADEATRGDIVRLLNLDQ
PLIQISSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGIIYCNSRAKVE
DTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRR
CLEEKPAGAQQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGKQQPCGNC
DICLDPPKRYDGLADAQKALSCVYRVGQRFGLGYIVEVLRGANNQRIREM
GHDKLSVYGIGREQTHEHWVSVLRQLIHLGLLSQNIAQFSALQLTEAARP
VLRAELPLQLAVPRIQSLKVRSSANQKSYGGNYDRKLFAKLRKLRKSIAD
EGNIPPYVVFNDATLLEMAEQMPITASELLSVNGVGQRKLERFGAPFMAL
IRDHVDNNDD
>YPTB0165 rhlB, putative DEAD-box helicase
MSKTHLTEQKFSDFALHPLVVEALENKGFQYCTPIQALALPLTLSGRDVA
GQAQTGTGKTLAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQI
HSDAESLSQVTGLKLGLAYGGDGYDKQLKVLESGVDILIGTTGRLIDYAK
QNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVDKRLNMLFSAT
LSYRVRELAFEQMNNAEYVEVEPLQKTGHRIKEELFYPSNEEKMRLLQTL
IEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRA
GESGHSISLACEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLA
RTRTGNGPRRNSAPRRSGAPRNNRKRPG
>YPTB1214 rhlE, putative ATP-dependent RNA helicase rhlE
MSFDSLGLNADILRAVEEQGYLVPTPIQRQAIPVVLEGRDLMASAQTGTG
KTAGFTLPLLQLLSQDQQPIKGRRPVRALILTPTRELAAQIDENVQSYSK
YLKLRSLVVFGGVSINPQMMKLRGGVDILVATPGRLLDLEHQNAVDLSKI
EILVLDEADRMLDMGFIHDIRRVLAKLPAKRQNLLFSATFSDEIKGLASK
LLHNPASVEVARRNTASEQIAQSVHFVDKNRKRELLSQMIGEGNWQQVLV
FNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVC
VDEHKLLRDIERLLKREIPRIALDGYEPDPSIKADPIQNGRQGRGAQRPG
MGRGSSAGRPQNGGGAAGRGDSRNSRPRSQADGQRRPAGPSSRGRSRNPG
E
>YPTB2965 rnhA, ribonuclease HI
MTKQVEIFTDGSCLGNPGPGGYGAILRYKQHEKTFSAGYYLTTNNRMELM
AAIVALEALTSPCEVTLSTDSQYVRQGITQWIHNWKKRGWKTADRKPVRN
VDLWQRLDLAIQSHTIQWEWVKGHAGHPENERCDELARQGANSPTLDDTG
YNPD
>YPTB2989 rnhB, ribonuclease HII
MSETFIYPQANLIAGVDEVGRGPLVGAVVTAAVILDPNRPIVGLADSKKL
SEKRRLSLYDEITEKALSWSLGRAEPEEIDQLNILHATMLAMQRAVSGLH
IVPDYVLIDGNRCPKLQMPSLAVVKGDSRVAEISAASILAKVTRDREMTE
LDLLFPEYGFAQHKGYPTAFHLEKLAALGATVHHRRSFGPVKRVLGLV
>YPTB2296 rnt, ribonuclease T
MADKSDLNALSGRFRGYYPVVIDVETAGFNAQSDALLEIAAVTLQMNKEG
WLLPDETLHFHVEPFEGANLQPEALAFNGIDPTNPLRGAVSEHDALHAIF
KAVRKGIKDKGCNRAIIVAHNANFDHSFVMAAAERASLKRNPFHPFATFD
TAALSGLVLGQTVLAKACLAAGIPFDSSQAHSALYDTLQTAKLFCELVNR
WKKLGGWPLPTAESE
>YPTB2040 ruvA, Holliday junction DNA helicase
MNAANHAVASILKGIVGKERINVIGRLRGIILEKQPPLVLLETNGVGYEV
QLPMTCFYELPELGQEAIIFTQFVVREDAQLLYGFNNKQERALFRELIKV
NGVGPKLALAILSGMSAQQFVGAVEREDITTLVKLPGVGKKTAERLVVEM
KDRFKGLNGDLFNNTGDISLPTASPQTSDADIEAEAASALVALGYKPQEA
SRLVSKIAKPGADCETLIRDALRAAL
>YPTB2041 ruvB, Holliday junction DNA helicase
MIEADRLISAAVINDEESIDRAIRPKLLTEYVGQPHVREQMEIFIQAAKQ
RGDALDHVLIFGPPGLGKTTLANIIANEMGVNLRTTSGPVLEKAGDLAAM
LTNLEPHDVLFIDEIHRLSPVVEEILYPAMEDYQLDIMIGEGPAARSIKL
DLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVADLEHIVSRSAKCL
GLELTPEGAHQLARRSRGTPRITNRLLRRVRDFAEVRADGAINGEVAMKA
LDMLNVDAEGFDFMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPYLIQQGFIQRTPRGRIATNHAYKHFGITREE
>YPTB2039 ruvC, crossover junction endodeoxyribonuclease
MAIVLGIDPGSRVTGYGVIRQQGRQLTYLGSGCIRTVVDDMPTRLKLIYA
GVTEIITQFQPDFFAIEQVFMAKNPDSALKLGQARGAAIVAAVNLNLPVS
EYAARQVKQTVVGTGAAEKSQVQHMVRSLLKLPANPQADAADALAIAITH
CHLSQNTLRLGNDQMTLSRGRIR
>YPTB1569 sbcB, exodeoxyribonuclease I
MSDKNKQPTFYVHDYETFGQRPALDRPAQFAGVRTDLDFNLVEEPLVIYC
KPADDYLPQPEAVMITGITPQHALANGVNEAEFSRQIHQAFSVPGTCILG
YNNIRFDDEVSRNIFYRNFYDPYAYSWQGGNSRWDLLDVMRACYALRPEG
IVWPENDDGLPSFKLEHLTKANGVEHLQAHDAMSDVYATIAMAKLVKQAQ
PRLFDYLYQHRSKHKINALIDIAEMTPLVHVSGMFGAARGNTSWVAPLAW
HPENKNAVIMCDLAGDMSPLLELDSDTLRERLYTRRDKLQAQESAIPIKL
VHINKCPVLAPAKTLLPENADRLGIDRQRCLQNLQLLRQNPQVREKVVAL
FAQAEPFAVTDDVDTQLYNGFFSDADRATMKIIQQTEPQNLPALDLTFQD
PRLEALLFRFRARNYPNTLNNSEQQRWLQHRREALSPERVQDYVLQLEQF
YNQYEDDKEKLALLKALFEYAKGLVS
>YPTB0915 sbcC, putative ATP-dependent dsDNA exonuclease
MKILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAI
CLALYHQTPRLIVTPSQNELMTRHTAESLAEVEFDVKGIRYRAFWSQRRA
RNSPDGNLQAPKVELALCENGKILADKVRDKLDMIAAITGLDFGRFTKSM
MLSQGQFAAFLNADANDRAELLEELTGTDIYGRLSERVFEKHKQAKIDLD
ALHQRASGIELLNEEQRLALAQQIDALSQQEQQLSKEQLVTQNQINWLTG
WQQQQQHVQQYQQQQVLVEQEYQQALPGLQRLARSEPAEKLRPLQRERDR
SQKDLQQTQQRITALAQQQQQYLAQLTPLTQAVEQATAARQQQQLNQHEQ
ETLIEQRIVPLDNLITQQQQTLSQLAGQIQQLRAKEQQNSQQLALNEQKL
LQTHQRLQQLADYANLHAHHQHWEKHLPLWHEQFRQLQLQQQQSAQSEQQ
LHQQTTLLATLQQQATTLSAQEKQQQVALAEARAQASYLQQKLLVLEQQQ
PSAQLRQQLNEFNEQRQICQQLAALSPLAQQIQALYDKQQQQFTAQQQQL
KQLEQQLTEKRQLYQQQKQHLVDLEALLEREKQLVTLEAERAKLQPGDAC
PLCGAVEHPAITAYQAVKPSETAVRVAKLRLQVEQLYTEGTELRTQVASM
QQHQQRIEQELQDHRQQLAAYQQRWQTLAQPLSLAFTLNEPDALALWLEQ
HEQQEQACQLKLVEYERLTQQYQQAKDILTQLEQRQQEHQQQLALITERQ
KNAQQTYQQLQSQYQHQQEALIAQQQVLNHTLTELSLSVPDADQQQNWLA
QREEECQRWQQHQQEQQRLTIEQKTLETRIENERRHLQECIDQLSALSQQ
RQQAETLLQQQIQQRRALFGEDIVAEVRQRLRLQQQQAELAQQNAEKALQ
QVQSQLNRLSGELTGLEQQCQQYQQRATTTQAELQQALSTSEFADETALT
AALLSEEERQHLQQLQQQLNERRQQAQIRLQQAREILDQHLQLCPQGVDK
SSELTLLQQQSEQLLAQLKTTTLRQGELRNQLESDTTRRHNQRTLFEQIE
RSQQQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLSRLHGR
YLLQRKTTDALELQVVDTWQADAIRDTRTLSGGESFLVSLALALALSDLV
SHKTSIDSLFLDEGFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMK
DRIPVQIKVKKVNGLGVSRLDNAFRVNQD
>YPTB0916 sbcD, ATP-dependent dsDNA exonuclease
MRIIHTSDWHLGQYFFTKSRAAEHQAFLHWLIEQIKEHQVDALIVAGDIF
DTGAPPSYARELYNRFIVELQPTACQLVVLGGNHDSVATLNESRDLLSYL
NTSVISCASRDLKQQVIILKNRQQQPAAVLCAIPFLRPRDLVTSQAGESG
DQKQLALQEAIAGHYQTLYQRALELRSQLGLPLPIIATGHLTTVGVTTTD
SVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKTEHIRYSGSPIAL
SFDELSKEKSVYLVEFDQQNLSSVTPLFIPQFQPMQLIKGDLRQIEQQLA
AFAGHEGLPVWLDIEVATQDYLTDIQRRIQALAANLPVEVVLLRRSKEQR
NNSIHRQEKETLNELTVSDVFERRLALEADLSEPRQQRMRQMFNYVVDEI
AQDGSNGVAEEPAQ
>YPTB2924 seqA, putative negative regulator of replication initiation
MKTIELDEELYRYIASHTQHIGESASDILRRMLKFTAGQPVTDLPVSGAA
VKVTAQPAPRDRVRAVRELLLSDEYAEQSRAVNRFMLVLSTLYTLDAQAF
TEATESLHGRTRVYFAGDQQTLLQHGTHTKPKHVPGTPFWVITNTNTERK
RSMVQHIMLAMQFPPELTDKVCGTI
>YPTB2900 srmB, ATP-dependent RNA helicase
MTVTNFSELDLDERLIDALRDKGYERPTAIQASAIPPAMDGRDVLGSAPT
GTGKTAAFLLPALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELA
KYTQLDIATITGGVAYMNHAEVFSENQDVVVATTGRLLQYIKEENFDCRA
VETLILDEADRMLDMGFAQDIETISAETRWRKQTLLFSATLEGEAIREFA
ERILNEPVELEADPSRRERKKIQQWYYRADDIKHKTALLCHLLKQPDVSK
SIIFVRTRERVHELVSWLREAGINAWFLEGEMVQAKRTEAVIRLGDGRVN
VLVATDIASRGLDIDDISHVFNFDMPRTADVYLHRIGRTGRAGRKGVAIS
LVEAHDHILLGKIGRYLNEPLKPRVIDELRPTSKAPSEKATGKPSKKVLA
KRKEQKESSKEKVKVKVRHRDAKNVGKRRTPKAKPDTKSAG
>YPTB0380 ssb, single-strand binding protein
MASRGVNKVILVGNLGQDPEVRYMPNGGAVANITLATSESWRDKQTGEQK
EKTEWHRVVLFGKLAEVAGEYLRKGSQVYIEGALQTRKWQDQSGQERYTT
EVVVNVGGTMQMLGGRQGGGAPAGGGAAPQDGGAQGGWGQPQQPQGGNQF
SGGQASRPAQPAPAAPQGGNEPPMDFDDDIPF
>YPTB3914 tag, DNA-3-methyladenine glycosylase
MSLQRCGWVTSDPLYLAYHDTEWGVPLKDSRALFEMICLEGQQAGLSWIT
VLKKREHYRKSFHHFDPVKVAKMGPEEVEIRVQDSGIIRHRGKIQAIITN
AQAYLAMEANGEDFSRFIWSFVDDEPKINHWWCLAEAPATTAVSDAMSKA
LKKRGFKFIGSTICYAFMQASGLVNDHMANCFCHPDNAVK
>YPTB0621 tnp, transposase for the IS1541 insertion element
MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNV
NILEAECCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>YPTB1554 tnp, transposase for the IS1541 insertion element
MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNV
NILEAECCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>YPTB3201 tnp, Transposase for the IS1541 insertion element
MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNV
NILEAECCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>YPTB2010 tnp, transposase for the IS1541 insertion element
MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNV
NILEAECCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>YPTB0777 tnpA, putative transposase-like protein
MDEKKLKALAAELAKGLKTEADLNAFSRMLTKLTVETALNAELTEHLGHE
KNTPKSGSNTRNGYSSKTLLCDDGEIELNTPRDRENTFEPQLIKKNQTRI
TQMDSQILSLYAKGMTTREIVATFKEMYDADVSPTLISKVTDAVKEQVAE
WQNRQLDALYPIVYMDCIVVKVRQNGSVINKAVFLALGINTEGQKELLGM
WLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHI
QLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAW
DDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIK
KRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSD
HL
>YPTB1882 tnpA, putative transposase
MACREVELSVRTWQRWQTSPEDQRTTAIRPEPTNRLRVEEEQQIRAVCHQ
PEYANLPPSQIVPRLADKGVYLASESTFYRVLRRHGEVHHRGRCLKPGRV
KPPTTFTASGPCQVWTWDITWLPSWVRGRWYYLYLMEDVFSRKITGAEVH
ETESGELAAALMQRTVLRERCYRQPQVLHADNGAAMKSQTLQVKLAELNI
SPSHSRPRVSNDNAYVESLFRTLKYVPQWPSSGFNHLEEARVWVDKFTRW
YNEEHRHSGIGYVTPLQRHTGEDKALLAQRYKVYQAARAANPTRWSRQTR
NWEWQESVTLNPERGKQAA
>YPTB0699 tnpA, putative transposase
MRDEKSLAHTRWNCKYHIVFAPKYRRQVFYREKRRAIGSILRKLCEWKNV
NILEAEYCVDHIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKY
RNREFWCRGYYVDTVGKNTARIQEYIKHQLEEDKMGEQLSIPYPGSPFTG
RK
>YPTB1892 tnpA, putative transposase
MACREVELSVRTWQRWQTSPEDQRTTAIRPEPTNRLRVEEEQQIRAVCHQ
PEYANLPPSQIVPRLADKGVYLASESTFYRVLRRHGEVHHRGRCLKPGRV
KPPTTFTASGPCQVWTWDITWLPSWVRGRWYYLYLMEDVFSRKITGAEVH
ETESGELAAALMQRTVLRERCYRQPLVLHADNGAAMKSQTLQVKLAELNI
SPSHSRPRVSNDNAYVESLFRTLKYVPQWPSSGFNHLEEARVWVDKFTRW
YNEEHRHSGIGYVTPLQRHTGEDKALLAQRDKVYQAARAANPKRWSRQTR
NWEWQESVTLNPERGKQAA
>YPTB2140 topA, DNA topoisomerase I
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSASKKSANS
AEEKAKKDDKPKKKVKKDEKVALVNRMGVDPYHGWKAQYEILPGKEKVVA
ELKALAENADHIYLATDLDREGEAIAWHLREVIGGDDKRFSRVVFNEITK
NAIQQAFNQPGELNISRVNAQQARRFMDRVVGYMVSPLLWKKIARGLSAG
RVQSVAVRLVVEREKEIKAFVPEEYWELHADLVAKGDIPIQMEVTHAHGK
PFKPVNREQTHAALTLLENARYKVLDREDKPTSSKPSAPFITSTLQQAAS
TRLSFGVKKTMMMAQRLYEAGHITYMRTDSTNLSQDALTMVRGYIGDNFG
DKYLPATPNQYSSKENSQEAHEAIRPSDVNVLAEQLKDMEADAQRLYQLI
WRQFVACQMPPAKYDSTTLTVQAGDFQLRAKGRTLRFDGWTKVMPALRKG
DEDRTLPVIEVGSDLDLQKLIPSQHFTKPPARYSEASLVKELEKRGIGRP
STYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNYDFTA
RMESGLDQVANDQAEWKTVLDGFFAEFSEQLEKAEKDPEEGGMRPNQMVM
TSIDCPTCGRQMGIRTASTGVFLGCSGYALPPKERCKTTINLVPDAEILN
ILEGDDAETNALRARRRCQKCGTAMDSYLIDNQRKLHVCGNNPACDGYEI
EAGEFRIKGYEGPIVECEKCGSEMHLKMGRFGKYMGCTNDECKNTRKILR
SGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVFLAANTFPKSRETRA
PLVEELVRFKDRLPEKLRYLADAPVVDKEGNKTLVRFSRKTKQQYVSSEK
DGKATGWSAFYIDGKWVEAKK
>pYptb0031 topB, DNA topoisomerase III family
MRVFIAEKPALAKVIADALGAGVRKDGYIQCGSDVVTWCVGHILELSPPE
AHNPAYAKWNAADLPLKLRPAKYQPKTTTAAQFKVVQQLVGQATEIVHAG
DPDDEGQLLVDEVLTYCDNTSPVKRVLINDLNTAAAKKALANLRDNREFL
GLSQKALARSIGDQLYGFNMTRAYTLAAQQKGVQGVLSVGRVQTPILGLI
VNRFNTFQNHSAAFFYNLSANIDVIGHRIVPRYQVPEGAPVDDKGRLIDE
TVANDVATACKGQPATVTASQTEEKSTPAPLPFSLLDLQAHMSKKHGLSA
QQTQDVTQSLRENHKAITYNRSDCNYLTSEQFGDACATLAAIASALPVLA
VSLSEANPAQKGRAFDDKKVSAHTAIIPTTTAPNPASMTVNERQVYHAIA
AQYLAQFLPEKRYLAASATFAVNGHIFIAKATQTTQDGWTTLLSGTEDNE
GESNDEFETSPFAALSALSNSDEGVCESVTVSKEKTKPLPLYTEATLLKD
LQRVAKYVKDPKIRQLLKDRDAGKTGEHGGIGTPATRASMLETLQKRGFY
TVEKKKLIPTELGLSFIASLPEIATAPDMTALWHEQQQMIEQGSFTVDEF
LDALEDFIAGQMNNVDLSGMADGVPQTQSSQRPRLTAVCPKCNGAVVISA
KVYACSGCELKVWGEVASKKLTLPQVETLFSKGKTAVLKGFKSKAGKPFD
AKLVLDTATGKVSFEFENKK
>YPTB2091 topB, DNA topoisomerase III
MMRLFIAEKPSLARAIADILPKPHRRGGGFIACGNDQMVTWCVGHLLEQA
QPDAYDSRYARWSLADLPIIPEKWQLQPRPSVSKQLNVIKQLLQQADEVV
HAGDPDREGQLLVDEVLDYLGLAAEKRQNVRRCLINDLNPQAVERAVERL
RYNREFIPLCVSALARARADWLYGINMTRAYTILGRNAGYDGVLSVGRVQ
TPVLGLVVRRDEEIESFIPKDFFEVKAHIVTPADERFIALWQPSDSCESY
QDEEGRLLHRPLAEHVVNRITGQPALVTSYNDKRESETAPLPFSLSTLQI
EAAKRFGLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHSVLN
AISLHQSDLLPLEVMDSDRRNRCWDDKKVDAHHAIIPTARASKVNLTTDE
GKVYRLVAQQYLMQFCPDAQFRKCVIELDIAGGKFIAKARFLAEAGWRTL
LGSKERDEENEGAPLPVVAKGAELLCERGEVVERQTQPPRPFTDASLLSA
MTGIARFVQDKELKKVLRATDGLGTEATRAGIIELLFKRTFLFKKGRYIH
ASPAGRALIHALPDIAARPDMTAHWESTLTQISEKNCRYQDFMQPLVMTL
QDLISQAKQNRSPQVFRGLPAGPSGAPKKRKKISSKAKESKS
>YPTB1130 trp1400A, IS1400 transposase A
MKKRFSDEQIINILREAEAGVSARELCRKHAISEASYYNWKAKYGGMEAS
DIKKIKDLEDENRRLKQMFANLSLECRALKDVIEKKL
>YPTB2904 ung, putative uracil-DNA glycosylase
MSPSLTWHDVIGQEKEQPYFKDTLAYVAAERRAGKTIYPPQKDIFNAFRL
TELDQVKVVILGQDPYHGPNQAHGLSFSVLPGVPAPPSLGNIYKELVTDI
PGFQRPNHGFLQSWAEQGVLLLNTVLTVEAGKAHSHANLGWETFTDKVIA
ALNEHREGVIFMLWGSHAQKKGRIINTERHYILKAPHPSPLSAHRGFLGC
KHFSQANQLLQQQNQQPIDWQPKLPAVE
>YPTB0379 uvrA, excinuclease ABC subunit A
MDNIEVRGARTHNLKNINLIIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGT
ITEIHDYLRLLFARVGEPRCPDHDVPLAAQTVSQMVDNVISQPEGRRLML
LAPVVKDRKGEHTKILENLAAQGYIRARIDGEVCDLSDPPKLELQKKHTI
EVVVDRFKVREDLAQRLAESFETALALSGGTAVVADMDDPHVEELLFSAN
FACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQFFDPDRVLQNPEL
SLAGGAIRGWDRRNFYYFQMLRSLAEHYKFDIEAPFNSLDSAVQQAVLYG
SGKDTIEFKYINDRGDTTVRRHPFEGVLHNMERRYKETESSAVREELAKF
ISNRSCASCSGTRLRREARYVFVENTTLPEISELSIGHALSFFQNMKLSG
QRAQIAEKILKEIGDRLKFLVNVGLNYLSLSRSAETLSGGEAQRIRLASQ
IGAGLVGVMYVLDEPSIGLHQRDNERLLETLIHLRNLGNTVIVVEHDEDA
IRAADHVIDIGPGAGVHGGEVVAEGTVDDIMAAPASLTGQFLSGKRSIAI
PEKRVSADPSKVLKLIGATGNNLKDVTLTLPVGLFSCITGVSGSGKSTLI
NDTLYSIAQRQLNGATITEPAPYREIQGLEHFDKVIDIDQSPIGRTPRSN
PATYTGIFTPIRELFAGVPESRTRGYTPGRFSFNVKGGRCEACQGDGVIK
VEMHFLPDIYVPCDHCKGKRYNRETLEIKYKGKSIHEVLAMTIEEAREFF
DAVPALARKLQTLIDVGLSYICLGQSATTLSGGEAQRVKLSRELSKRGTG
QTLYILDEPTTGLHFADIQQLLAVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECAASHTARFLKPMLQRKPQTV
>YPTB1187 uvrB, excinuclease ABC subunit B
MSKSFKLHSVFKPAGDQPEAIRKLEEGLENGLAHQTLLGVTGSGKTFTVA
NVIADLNRPTMILAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEA
YVPSSDTFIEKDASVNEHIEQMRLSATKALLERRDVVVVASVSAIYGLGD
PDLYLKMMLHLTRGMIIDQRSILRRLSELQYSRNDQVFQRGTFRVRGEVI
DIFPAESDEWALRVELFDEEVERLSIFDPLTGQLQHEVPRFTVYPKTHYV
TPRERILQAMEEIKVELAERRQVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEAPPTLFDYLPADGLLIVDESHVTIPQIGGM
YKGDRSRKETLVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGKYE
LEKSGGDIIEQVVRPTGLLDPLIEVRPVATQVDDLLSEIRIRAAINERVL
VTTLTKRMAEDLTDYLSEHGAKVRYLHSDIDTVERVEIIRDLRLGEFDVL
VGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKA
ILYGDRITASMEKAIGETERRRAKQQAYNEERGIIPQGLNKKIGDILQLG
QPSMRGKGKGRGSHKMADTTQYQSLSPKALDQKIRELEAKMYTYAQNLEF
EQAAELRDQVHQLRQQFIAIS
>YPTB1736 uvrC, excinuclease ABC subunit C
MTDLFDYKEFLKTVTSQPGVYRMYDTAGTVIYVGKAKDLKKRLTSYFRAQ
VANRKTETLVKNIAQIDVTVTHTETEALLLEHNYIKLYQPRYNVLLRDDK
SYPLIFLSADEHPRLAVHRGAKHEKGEYFGPFPNSYAVRETLALLQKLFP
VRQCENSVYRNRSRPCLQYQIGRCSGPCVEGLVSEEEYQRQVDYVRLFLS
GKDQQVLTQLITRMEEASQQLHFEDAARIRDQIQAVRRVTEQQFVSGDSE
DLDVIGVAFDAGLACVHVLFIRLGKVLGSRSYFPKVPAGTELSEVVQTFV
GQFYLQGSQGRTLPGEILLDFTLTEKDLLASSLSELAGRKIQIQSRPRGD
RARYLKLARTNASTALITRLSQQSTIHQRMKELAKVLKLDEINRMECFDI
SHTMGEQTVASCVVFDANGPVRSEYRRYNISGITPGDDYAAMAQVLKRRY
GKALDDQKIPDVIFIDGGKGQLSQAFDVFASLNVPWDKQKPLLVGVAKGS
DRKAGLETLFLASEGEGFSLPPDSPALHLIQHIRDDSHNHAITGHRQRRS
KVKNTSALEMIEGVGPKRRQALLKYMGGLQPLFNASVEEIAKVPGISQAL
AEKIHNALKH
>YPTB0194 uvrD, DNA helicase II
MDVSDLLDSLNEKQRDAVAAPRGNLLVLAGAGSGKTRVLVHRIAWLLSVE
NASPYSIISVTFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRA
HHLDANLPQDFQILDSDDQLRLLKRLVKALNLDEKQWPPRQAMWYINGKK
DEGLRPQHIESYGNPVEATWLRIYQAYQEACDRAGLVDFAELLLRAHELW
LNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGERSNVMIVGDDD
QSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSIILAAANALIANN
DGRMGKNLWTDGAEGEPISLYCAFNELDEARFVVNRIKAWQDNGGALNDC
AILYRSNAQSRVLEEALLQTATPYRIYGGQRFFDRQEIKDSLAYLRLISN
RNDDAAFERVVNTPTRGIGDRTLDVVRQTARDRQLTLWQSTRAMLQEKVL
AGRAASALQRFVELIDSLARETADMPLHVQTDRVIRDSGLWSMYEQEKGE
KGQARIENLEELVTATRQYSYQDEDQDLMPLQAFLSHAALEAGDGQADAY
QDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGLTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRASV
SRPVNHRRMGTPMHENDSGFSLGQRVRHPKFGEGTIVNLEGSGEHNRLQV
AFPGEGIKWLVAAYARLEPV
>YPTB0192 xerC, putative integrase/recombinase
MTEFSASLAPQVEAFLRYLSIERQLSPLTVTSYRRQLSALMEIGEQMGLA
HWQTLDAAQVRSLVSRSKRTGLHASSLALRLSALRSFLNWLVSQGVLPAN
PAKGVSTPRSGRHLPKNIDVDEINKLLSIDLNDPLAVRDRAMLEVMYGAG
LRLSELVGMNCKHVDLASGDVWVMGKGSKERKVPLGKTAVTWLQHWLALR
ELFEPQDDAIFLANTGKRISARNVQKRFAEWGVKQGVSSHIHPHKLRHSF
ATHMLESSGDLRAVQELLGHANLTTTQIYTHLDFQHLATVYDAAHPRAKR
GKS
>YPTB3167 xerD, Probable site-specific integrase/recombinase
MKQQDNPLIEQFLDALWLERNLAENTLASYRLDLHALVGWLTHHNSDLLR
ASPQDLQSFLAERIEGGYKATSSARLLSAMRRLFQYLYREKLREDDPTAL
LSSPKLPQRLPKDLSEAQVDALLNSPNVDIPLELRDKAMLEVLYATGLRV
SELVGLTISDVSLRQGVVRVIGKGNKERLVPLGEEAVYWIENYMEHGRPW
LVNGASLDVLFPSNRSQQMTRQTFWHRIKHYAILAGIDSERLSPHVLRHA
FATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
>YPTB3014 xni, exodeoxyribonuclease IX
MQIHLLIVDALNLIRRIHAVQGSPCVKACQHALQQLIQHSQPSHAVAVFD
EDDRSDSWRHQCLPDYKAGRSPMPDNLQQEMPLIRQAFNELGVACWHSPG
NEADDLAATLVVKVAGAGHQVTIVSTDKGYCQLLAPNVQIRDYFQKRWLD
MPFVKQEFGVLPRQLPDYWGLAGISSSKIPGVAGVGAKTATLLLQQADTL
EVLYQNLESIPEKWRKKLQQHQQMAFTCKQIATLKTDLLLSGNLQQLRLK
K
>YPTB2834 xseA, exodeoxyribonuclease VII large subunit
MSQSSASSIFTVSRLNQTVRELLEREMGQIWLTAEISNFSQPASGHWYFT
LKDDRAQVRCAMFRNSNRRTTFRPQNGQQVLVRASITLYEPRGDYQLIAE
SMQPAGDGLLQQQFEQLKQQLAAEGLFDQSHKQPLPSPAKQVGVITSASG
AALHDVLHVLQRRDPSLPVIIYPTSVQGVDAPLQIVRAIQLANLRAECDV
LIVGRGGGSLEDLWSFNDERVARAIFNSHIPIVSAVGHETDVTIADFVAD
LRAPTPSAAAELVSRNQIELVRQIQGQQQRMEMAMDYYLAQRNQQFTRLE
HRLQQQHPHLRLARQQTLLLKLQRRLEESAQTQIRLLSKRTERLQQRLQQ
VQPQGQIHRYNQRVQQQEYRLRQAVERQLNGYRQRFGIACSQLEAVSPLA
TLARGYSVTQTPAGALLKTTKQVQAGDKLTTRLQDGWVESEITQVTVAKK
SRQKKVVTQ
>YPTB0941 xseB, exonuclease VII, small subunit
MPKKAASPEIKAASFETSLSELEQIVTRLESGELPLEDALNEFERGVQLA
RQGQQTLLQAEQRVQILLSDDVDAPLKPFTPDTE
>YPTB2094 xthA, exodeoxyribonuclease III
MKFVSFNINGLRARPHQLAAIIEQHQPDVIGLQETKVHDDMFPLEDVSQH
GYHVFYHGQKGHYGVALLTKEQPLAVRRGFPSDEEDAQRRIIMADLATPQ
GTLTVINGYFPQGESRDHPIKFPAKARFYADLQRYLEEQLSPEAQVLIMG
DLNISPTDLDIGIGEDNRKRWLRTGKCSFLPEEREWLERLQNWGLVDTFR
AANPDCNDHFSWFDYRSRGFDENRGLRIDLLLASQPLAARCIATGIDYAI
RGMEKPSDHAPVWSEFSL
>YPTB3868 yfjY, conserved hypothetical protein
MNLTLSPVVTELPLSTQRTVKRALFLLEAHLREPGTSFTSLGTVSDWLRL
RMARLDREVFMVLWLDNQHRLLAHETLFTGSINSTEVHPREIVKAALQHN
AAAVLLAHCHPSGHAEPSVADRQITGKIKDALALVEVRMLDHCIVGGMTV
YSFAEHGLL
>YPTB0579 yjjV, putative hydrolase
MPYFIDTHCHFDFPPFTGDEAASLACAAEANVRQLIVPSVKAAYFSRILA
LADRYPPLFAALGLHPLYIAEHEDADLAALASHLADKSPKLVAIGEIGLD
LYMDEPQFPHQLVILNMQLELAKQHDLPVILHSRRSHDPLAAALRKAALP
RAGVIHGFAGSLAQAQAFIRLGYYIGVGGTITYKRAQKTRHVMASLPLSS
LLLETDAPDMPLASFQGQANRPERAANVFAALCELRPEPADEIAAELMCN
SQRLFSLPPLRP