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2024-04-28 13:24:54

Gene list

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COG category: Replication, recombination and repair
Organism: Corynebacterium glutamicum ATCC 13032, DSM 20300 = ATCC 13032

Number of genes found: 168

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Corynebacterium glutamicum ATCC 13032, DSM 20300 = ATCC 13032
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA cg1371 Predicted nuclease of the RecB familychromosome CDS1281738 693 + 0.497835
NA cg2226 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptakechromosome CDS2112932 1185 - 0.52827
NA cg2578 secreted DNA uptake protein or related DNA-binding proteinchromosome CDS2461247 654 - 0.565749
NA cg0885 HELICASE, UVRD/REP FAMILYchromosome CDS812643 3051 + 0.59587
NA cg1303 NTP pyrophosphohydrolasechromosome CDS1208296 396 - 0.520202
NA cg1316 Superfamily II DNA/RNA helicases, SNF2 familychromosome CDS1221363 3105 + 0.55942
NA cg2534 putative secreted proteinchromosome CDS2415028 567 - 0.500882
NA cg1074 conserved hypothetical proteinchromosome CDS998300 627 - 0.569378
NA cg3417 NTP pyrophosphohydrolasechromosome CDS3266278 531 + 0.52354
NA cg1400 putative DNA polymerase III alpha subunit, the Gram-positive typechromosome CDS1308927 714 - 0.560224
NA cg1607 NTP pyrophosphohydrolases including oxidative damage repair enzymeschromosome CDS1496654 678 + 0.551622
NA cg2107 Superfamily II DNA or RNA helicasechromosome CDS1996542 2553 + 0.541716
NA cg0355 pyrophosphohydrolasechromosome CDS309262 780 + 0.60641
NA cg1916 hypothetical protein predicted by Glimmer/Criticachromosome CDS1802966 606 + 0.533003
NA cg1318 DNA repair exonucleasechromosome CDS1225355 1176 + 0.521259
NA cg1663 conserved hypothetical proteinchromosome CDS1553012 696 + 0.514368
NA cg2065 Superfamily II DNA or RNA helicasechromosome CDS1957672 2079 - 0.503127
NA cg0714 polymerase involved in DNA repairchromosome CDS630012 1593 + 0.601381
NA cg1018 PROBABLE ATP-DEPENDENT DNA HELICASE PROTEINchromosome CDS950260 2052 + 0.540448
NA cg3043 NTP pyrophosphohydrolase/oxidative damage repair enzymechromosome CDS2902561 495 - 0.545455
NA cg1302 Predicted HKD family nucleasechromosome CDS1205381 2916 - 0.471536
NA cg2977 putative membrane proteinchromosome CDS2836929 750 - 0.548
NA cg1234 putative excinuclease ATPase subunit-UvrA-like proteinchromosome CDS1133598 2343 - 0.548015
NA cg1205 strong similarity to hypothetical protein Rv2133c-Mycobacterium tuberculosischromosome CDS1109671 708 + 0.526836
NA cg0208 hypothetical proteinchromosome CDS180843 459 + 0.544662
NA cg4004 hypothetical proteinchromosome CDS1140703 261 + 0.505747
NA cg1963 Superfamily II DNA/RNA helicasechromosome CDS1844990 1842 + 0.522801
NA cg1498 RecG-like helicasechromosome CDS1392263 2124 + 0.574388
NA cg1519 hypothetical protein predicted by Glimmer/Criticachromosome CDS1410892 378 - 0.494709
NA cg0773 PUTATIVE EXODEOXYRIBONUCLEASEchromosome CDS687863 960 + 0.558333
NA cg1843 Superfamily II DNA/RNA helicase, SNF2 familychromosome CDS1737470 2679 - 0.575588
NA cg1500 N6-adenine-specific methylasechromosome CDS1394621 585 + 0.593162
NA cg0181 PUTATIVE DNA REPAIR PROTEINchromosome CDS156849 693 + 0.528139
NA cg0845 Superfamily II DNA/RNA helicase, SNF2 familychromosome CDS775620 2889 - 0.532364
NA cg2024 putative nuclease subunit of the excinuclease complexchromosome CDS1916194 1512 - 0.453704
NA cg1395 conserved hypothetical proteinchromosome CDS1303440 1152 - 0.547743
NA cg1839 Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvasechromosome CDS1731632 1419 - 0.542636
NA cg0888 NTP pyrophosphohydrolasechromosome CDS819996 717 + 0.539749
NA cg3401 hypothetical protein predicted by Glimmerchromosome CDS3256161 252 + 0.456349
NA cg1241 hypothetical protein predicted by Glimmer/Criticachromosome CDS1140825 264 + 0.511364
NA cg0934 conserved hypothetical proteinchromosome CDS866587 2202 - 0.571299
NA cg1985 Superfamily I DNA or RNA helicasechromosome CDS1863007 3768 + 0.496815
NA cg3419 Uncharacterized membrane protein, virulence factor homologchromosome CDS3269608 3108 + 0.600064
NA cg2132 conserved hypothetical proteinchromosome CDS2024452 1362 + 0.599853
NA cg1028 PUTATIVE RESTRICTION-MODIFICATION SYSTEM: METHYLASEchromosome CDS959310 1158 - 0.603627
NA cg0302 DNA polymerase III epsilon subunit or related 3'-5' exonucleasechromosome CDS264597 1083 - 0.558633
NA cg1837 Predicted endonuclease involved in recombinationchromosome CDS1728091 549 - 0.568306
NA cg0886 PROBABLE DNA HELICASE II PROTEINchromosome CDS815686 3213 + 0.568627
NA cg2697 SINGLE-STRAND DNA BINDING PROTEINchromosome CDS2569542 618 - 0.533981
NA cg1384 putative NUDIX hydrolasechromosome CDS1294696 801 + 0.535581
NA cg2432 MUTT/NUDIX FAMILY PROTEINchromosome CDS2322979 537 - 0.541899
NA cg2064 DNA TOPOISOMERASE I (OMEGA-PROTEIN)chromosome CDS1954015 2280 - 0.531579
NA cg2097 DNA or RNA helicase of superfamily IIchromosome CDS1986302 1713 - 0.578517
NA cg1035 TatD related DNasechromosome CDS964279 834 + 0.538369
NA cg3274 Site-specific recombinases, DNA invertase Pin homolog-fragmentchromosome CDS3134027 219 - 0.607306
NA cg1307 Superfamily II DNA and RNA helicasechromosome CDS1211402 2199 + 0.594361
NA cg2576 putative DNA polymerase III delta subunitchromosome CDS2458584 996 - 0.543173
NA cg2228 Predicted endonucleasechromosome CDS2115623 369 - 0.493225
NA cg0889 PUTATIVE DNA HELICASE RECQchromosome CDS820727 2037 + 0.575356
NA cg0933 DNA or RNA helicase of superfamily IIchromosome CDS864864 1674 - 0.58184
NA cg1733 conserved hypothetical proteinchromosome CDS1622523 786 + 0.577608
NA cg0395 hypothetical proteinchromosome CDS341348 1032 + 0.59593
NA cg2993 conserved hypothetical proteinchromosome CDS2849585 501 - 0.57485
NA cg0186 Methylated-DNA--protein-cysteinemethyltransferasechromosome CDS160030 345 + 0.524638
NA cg1641 Superfamily II DNA or RNA helicasechromosome CDS1529451 1347 - 0.564959
NA cg0842 PUTATIVE DNA HELICASEchromosome CDS762376 2301 - 0.555411
NA cg2321 DNA polymerase III epsilon subunit or related 3'-5' exonucleasechromosome CDS2202675 1431 + 0.524109
NA cg1683 Superfamily II DNA and RNA helicasechromosome CDS1568581 2790 - 0.545878
NA cg1990 NUDIIX hydrolasechromosome CDS1868570 780 + 0.523077
'int cg1752 putative phage integrase-fragmentchromosome CDS1642013 459 + 0.54902
cglIIR cg1998 RESTRICTION ENDONUCLEASE CGLIIR PROTEINchromosome CDS1881962 1899 + 0.493418
cglIM cg1996 MODIFICATION METHYLASEchromosome CDS1879784 1092 + 0.53022
dinG cg2776 PROBABLE ATP-DEPENDENT DNA HELICASE-RELATED PROTEINchromosome CDS2637654 1878 + 0.57082
dinP cg2355 Nucleotidyltransferase/DNA polymerase involved in DNA repair, DinP homologchromosome CDS2238566 1404 - 0.543447
dnaA cg0001 CHROMOSOMAL REPLICATION INITIATOR PROTEINchromosome CDS1 1575 + 0.540952
dnaB cg3304 PUTATIVE REPLICATIVE DNA HELICASEchromosome CDS3154641 1533 - 0.562948
dnaE1 cg2338 PUTATIVE DNA POLYMERASE III, ALPHA CHAINchromosome CDS2218388 3567 - 0.525652
dnaE2 cg0738 PUTATIVE DNA POLYMERASE III ALPHA CHAINchromosome CDS652909 3168 + 0.544192
dnaG cg2489 DNA PRIMASEchromosome CDS2371077 1902 - 0.547844
dnaN cg0004 DNA POLYMERASE III, BETA SUBUNITchromosome CDS2292 1185 + 0.568776
dnaQ2 cg1457 DNA POLYMERASE III, EPSILON SUBUNIT, PUTATIVEchromosome CDS1359087 594 + 0.584175
dnaX cg0376 PUTATIVE DNA POLYMERASE III, DELTA' SUBUNITchromosome CDS328284 1260 + 0.579365
dnaZX cg0296 DNA POLYMERASE III GAMMA AND TAU SUBUNITSchromosome CDS258552 2328 + 0.602234
gyrA cg0015 DNA TOPOISOMERASE (ATP-HYDROLYSING)chromosome CDS11831 2571 + 0.594321
gyrB cg0007 DNA GYRASE SUBUNIT Bchromosome CDS5435 2055 + 0.559124
hrpA cg2111 PROBABLE ATP-DEPENDENT RNA HELICASE PROTEINchromosome CDS2001526 3909 + 0.540036
hrpB cg0178 PROBABLE ATP-DEPENDENT RNA HELICASE PROTEINchromosome CDS153224 2430 - 0.539506
int1 cg1507 probable phage-type Integrasechromosome CDS1401649 681 - 0.471366
int2' cg2071 putative phage Integrase (N-terminal fragment)chromosome CDS1964653 690 - 0.5
int3 cg2710 integrasechromosome CDS2583267 684 + 0.561404
ligA cg1401 DNA LIGASEchromosome CDS1309798 2043 + 0.559471
mag cg0151 PUTATIVE 3-METHYLPURINE DNA GLYCOSYLASEchromosome CDS129487 570 - 0.507018
mfd cg1099 PUTATIVE TRANSCRIPTION-REPAIR COUPLING FACTORchromosome CDS1020536 3654 + 0.573071
mutM1 cg2272 FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASEchromosome CDS2158342 834 - 0.543165
mutM2 cg3328 PROBABLE FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE PROTEINchromosome CDS3175213 810 + 0.546914
mutY cg2955 A/G-SPECIFIC ADENINE GLYCOSYLASEchromosome CDS2811952 882 + 0.57483
nei cg0969 ENDONUCLEASE VIII REMOVING OXIDIZED PYRIMIDINES MAchromosome CDS906086 771 + 0.555123
nth cg0353 PROBABLE ENDONUCLEASE III PROTEINchromosome CDS307955 783 + 0.554278
ogt cg3331 METHYLATED-DNA--PROTEIN-CYSTEINEMETHYLTRANSFERASEchromosome CDS3178035 477 - 0.524109
pcrA cg0976 ATP-DEPENDENT HELICASE PCRAchromosome CDS912697 2292 + 0.556719
phr cg0728 DEOXYRIBODIPYRIMIDINE PHOTOLYASEchromosome CDS644014 1449 - 0.462388
pknA cg0059 SERINE/THREONINE PROTEIN KINASEchromosome CDS42510 1410 - 0.556738
pknG cg3046 Serine/threonine protein kinasechromosome CDS2905672 2469 + 0.586472
polA cg1525 DNA POLYMERASE Ichromosome CDS1415287 2643 + 0.554294
priA cg1805 Primosomal protein N' (replication factor Y)-superfamily II helicasechromosome CDS1698549 2067 - 0.571843
recA cg2141 DNA RECOMBINATION/REPAIRchromosome CDS2034035 1131 - 0.534041
recB cg1694 RecB family exonucleasechromosome CDS1582274 837 + 0.541219
recF cg0005 DNA REPAIR AND GENETIC RECOMBINATION PROTEINchromosome CDS3585 1185 + 0.556962
recJ cg1956 SINGLE-STRANDED-DNA-SPECIFIC EXONUCLEASEchromosome CDS1833657 1863 + 0.513688
recN cg1602 DNA REPAIR PROTEIN RECNchromosome CDS1490570 1782 + 0.579686
recO cg2509 Recombinational DNA repair protein (RecF pathway)chromosome CDS2388894 729 - 0.587106
recR cg0298 DNA repair protein (RecF pathway)chromosome CDS261403 657 + 0.601218
res cg1929 RESOLVASE FAMILY RECOMBINASEchromosome CDS1811233 615 + 0.465041
rhlE cg0881 PROBABLE ATP-DEPENDENT RNA HELICASE PROTEINchromosome CDS809416 1275 - 0.575686
rnhB cg2230 PROBABLE RIBONUCLEASE HII PROTEINchromosome CDS2116613 669 - 0.566517
ruvA cg1870 Holliday junction resolvasome DNA-binding subunitchromosome CDS1763986 621 - 0.536232
ruvB cg1869 Holliday junction resolvasome helicase subunitchromosome CDS1762888 1092 - 0.561355
ruvC cg1871 CROSSOVER JUNCTION ENDODEOXYRIBONUCLEASEchromosome CDS1764646 642 - 0.543614
ssb cg3307 SINGLE-STRANDED DNA-BINDING PROTEINchromosome CDS3157291 678 - 0.575221
tagA1 cg3140 PROBABLE DNA-3-METHYLADENINE GLYCOSYLASE I PROTEINchromosome CDS2998858 591 + 0.536379
tagA2 cg0182 PROBABLE DNA-3-METHYLADENINE GLYCOSYLASE I PROTEINchromosome CDS157585 558 + 0.492832
tnp10b(ISCg10a) cg1185 TRANSPOSASE-fragmentchromosome CDS1097186 378 - 0.518519
tnp10c(ISCg10a) cg1184 TRANSPOSASE-fragmentchromosome CDS1096854 294 - 0.530612
tnp11a(ISCg11a) cg2807 transposase-fragmentchromosome CDS2666991 450 - 0.5
tnp14a(ISCg14a) cg1951 transposasechromosome CDS1828113 297 - 0.545455
tnp14b(ISCg14a) cg1950 transposasechromosome CDS1827220 897 - 0.535117
tnp15a(ISCg15a) cg2757 transposasechromosome CDS2625750 585 - 0.581197
tnp15b(ISCg15b) cg2759 transposasechromosome CDS2628126 537 + 0.582868
tnp16a(ISCg16a) cg0292 TRANSPOSASEchromosome CDS254327 1161 - 0.555556
tnp16b(ISCg16b) cg1716 transposasechromosome CDS1604939 1161 + 0.557278
tnp17c(ISCG17a) cg0428 TRANSPOSASE-fragmentchromosome CDS378186 330 + 0.536364
tnp18a(ISCg18a) cg0919 transposasechromosome CDS849198 303 + 0.617162
tnp19a(ISCg19a) cg3298 transposase-fragmentchromosome CDS3150829 162 - 0.617284
tnp19b(ISCg19a) cg3297 TRANSPOSASE-fragmentchromosome CDS3150612 261 - 0.597701
tnp1a(ISCg1a) cg1213 TRANSPOSASEchromosome CDS1115955 1311 + 0.519451
tnp1b(ISCg1b) cg2725 Transposasechromosome CDS2595722 1311 - 0.519451
tnp1c(ISCg1c) cg0692 TRANSPOSASEchromosome CDS611123 1311 + 0.519451
tnp1d(ISCg1d) cg2600 Transposasechromosome CDS2481196 1311 - 0.517925
tnp24a(ISCg24a) cg1515 transposase-fragmentchromosome CDS1408463 114 - 0.526316
tnp2b(ISCg2b) cg3151 Transposasechromosome CDS3005658 1515 + 0.526733
tnp2c(ISCg2c) cg2854 Transposasechromosome CDS2716287 1515 - 0.526733
tnp2d(ISCg2d) cg2426 Transposasechromosome CDS2317958 1515 - 0.526733
tnp2e(ISCg2e) cg2354 Transposasechromosome CDS2236691 1515 - 0.526733
tnp2f(ISCg2f) cg0226 TRANSPOSASEchromosome CDS192954 1515 + 0.526733
tnp3a(ISCg3a) cg1094 Transposasechromosome CDS1016612 711 - 0.59353
tnp3b(ISCg3b) cg1757 Transposasechromosome CDS1647128 711 + 0.59353
tnp4a(ISCg4a) cg2461 Transposasechromosome CDS2348668 396 - 0.555556
tnp5a(ISCg5a) cg0824 Transposasechromosome CDS740143 1503 - 0.532269
tnp5b(ISCg5b) cg2914 Transposasechromosome CDS2772844 1503 + 0.532269
tnp5c(ISCg5c) cg3266 Transposasechromosome CDS3128550 1239 - 0.517353
tnp6a(ISCg6a) cg1022 TRANSPOSASEchromosome CDS955517 222 + 0.522523
tnp6b(ISCg6a) cg1023 TRANSPOSASEchromosome CDS955746 480 + 0.522917
tnp6c(ISCg6c) cg1030 transposasechromosome CDS961626 222 + 0.522523
tnp6d(ISCg6c) cg1031 TRANSPOSASEchromosome CDS961855 480 + 0.522917
tnp7a(ISCg7a) cg1024 TRANSPOSASEchromosome CDS956443 384 + 0.643229
tnp8a(ISCg8a) cg3059 transposasechromosome CDS2920923 270 - 0.52963
tnp8b(ISCg8a) cg3058 transposasechromosome CDS2920001 897 - 0.516165
tnp9a(ISCg9a) cg1178 Transposasechromosome CDS1090001 1209 - 0.585608
topA cg0373 DNA TOPOISOMERASEchromosome CDS322911 2991 + 0.576396
ung cg1496 PROBABLE URACIL-DNA GLYCOSYLASE PROTEINchromosome CDS1389794 750 + 0.546667
uvrA cg1560 Excinuclease ATPase subunitchromosome CDS1443954 2850 + 0.545614
uvrB cg1550 EXCINUCLEASE ABC SUBUNIT Bchromosome CDS1435509 2163 + 0.538141
uvrC cg1795 Nuclease subunit of the excinuclease ABC complexchromosome CDS1688568 2091 - 0.565758
xerC cg2224 SITE-SPECIFIC RECOMBINASEchromosome CDS2111810 948 - 0.521097
xerD cg1608 INTEGRASE/RECOMBINASE XERDchromosome CDS1497328 915 + 0.565027
xseA cg1163 EXODEOXYRIBONUCLEASE VII LARGE SUBUNITchromosome CDS1077399 1254 - 0.603668
xseB cg1162 PUTATIVE EXODEOXYRIBONUCLEASE PROTEINchromosome CDS1077133 246 - 0.552846
xthA cg3036 EXODEOXYRIBONUCLEASE IIIchromosome CDS2894628 792 + 0.550505