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2024-05-08 07:54:38

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Parachlamydia sp. UWE25, UWE25

Number of genes found: 180

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Parachlamydia sp. UWE25, UWE25
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA pc1003 hypothetical proteinchromosome CDS1194716 366 + 0.360656
NA pc1451 hypothetical proteinchromosome CDS1723169 336 - 0.372024
NA pc0959 conserved hypothetical proteinchromosome CDS1156232 276 + 0.322464
NA pc0757 unknown proteinchromosome CDS935523 228 - 0.245614
NA pc0441 conserved hypothetical proteinchromosome CDS569837 1167 - 0.352185
NA pc1891 unknown proteinchromosome CDS2253784 885 - 0.335593
NA pc1029 conserved hypothetical proteinchromosome CDS1216149 813 + 0.396064
NA pc1026 conserved hypothetical proteinchromosome CDS1214535 249 - 0.405622
NA pc0049 unknown proteinchromosome CDS88089 858 - 0.305361
NA pc1045 unknown proteinchromosome CDS1243160 441 - 0.287982
NA pc0716 conserved hypothetical proteinchromosome CDS870666 438 - 0.372146
NA pc0797 hypothetical proteinchromosome CDS977463 630 + 0.352381
NA pc1405 conserved hypothetical proteinchromosome CDS1682779 321 - 0.305296
NA pc0087 unknown proteinchromosome CDS147770 441 + 0.353741
NA pc1129 unknown proteinchromosome CDS1354285 3321 - 0.31617
NA pc0593 unknown proteinchromosome CDS730554 1593 - 0.3258
NA pc1028 conserved hypothetical proteinchromosome CDS1215757 378 + 0.373016
NA pc1930 conserved hypothetical proteinchromosome CDS2298379 330 - 0.433333
NA pc0823 conserved hypothetical proteinchromosome CDS1008251 405 - 0.37284
NA pc1202 conserved hypothetical protein (chlamydia plasmid)chromosome CDS1434125 417 - 0.414868
NA pc0737 conserved hypothetical proteinchromosome CDS904066 879 + 0.32992
NA pc0777 unknown proteinchromosome CDS958424 411 + 0.321168
NA pc1323 conserved hypothetical proteinchromosome CDS1578709 879 + 0.327645
NA pc1929 conserved hypothetical proteinchromosome CDS2297918 360 - 0.386111
NA pc1198 conserved hypothetical proteinchromosome CDS1431772 360 - 0.388889
NA pc1699 conserved hypothetical proteinchromosome CDS2037227 1269 + 0.380615
NA pc1516 unknown proteinchromosome CDS1814064 2385 + 0.36478
NA pc0753 conserved hypothetical proteinchromosome CDS931994 1143 + 0.405949
NA pc1962 conserved hypothetical proteinchromosome CDS2338950 378 + 0.373016
NA pc1196 conserved hypothetical proteinchromosome CDS1428881 309 + 0.423948
NA pc1181 hypothetical proteinchromosome CDS1408863 963 + 0.356179
NA pc1005 conserved hypothetical proteinchromosome CDS1195366 846 + 0.387707
NA pc1561 conserved hypothetical proteinchromosome CDS1871435 336 + 0.297619
NA pc1004 conserved hypothetical proteinchromosome CDS1195109 264 + 0.356061
NA pc1523 unknown proteinchromosome CDS1827501 252 - 0.349206
NA pc1279 conserved hypothetical proteinchromosome CDS1533886 276 - 0.282609
NA pc1963 conserved hypothetical proteinchromosome CDS2339342 813 + 0.396064
NA pc1985 conserved hypothetical proteinchromosome CDS2366306 1605 - 0.365732
NA pc1374 conserved hypothetical proteinchromosome CDS1644327 3486 - 0.349971
NA pc0646 conserved hypothetical proteinchromosome CDS794065 369 - 0.295393
NA pc1143 conserved hypothetical proteinchromosome CDS1374334 1011 - 0.361029
NA pc1009 unknown proteinchromosome CDS1200784 2811 - 0.309143
NA pc0779 hypothetical proteinchromosome CDS959785 1968 + 0.318089
NA pc1953 conserved hypothetical proteinchromosome CDS2320619 420 - 0.407143
NA pc1651 conserved hypothetical proteinchromosome CDS1982943 339 + 0.374631
NA pc0903 conserved hypothetical proteinchromosome CDS1093491 516 - 0.449612
NA pc0902 conserved hypothetical proteinchromosome CDS1093201 369 - 0.441734
NA pc0295 conserved hypothetical proteinchromosome CDS408856 348 - 0.313218
NA pc1015 hypothetical proteinchromosome CDS1208446 366 + 0.303279
NA pc1199 conserved hypothetical proteinchromosome CDS1432423 333 + 0.342342
NA pc0411 unknown proteinchromosome CDS547458 558 + 0.351254
NA pc1006 unknown proteinchromosome CDS1196377 2874 - 0.305845
NA pc0522 unknown proteinchromosome CDS657339 981 + 0.321101
NA pc0994 conserved hypothetical proteinchromosome CDS1188880 306 - 0.395425
NA pc1833 conserved hypothetical proteinchromosome CDS2189234 2487 + 0.358665
NA pc0340 hypothetical proteinchromosome CDS463657 696 + 0.324713
NA pc1080 conserved hypothetical proteinchromosome CDS1290509 1968 - 0.371443
NA pc0068 hypothetical proteinchromosome CDS125921 183 - 0.295082
NA pc1814 unknown proteinchromosome CDS2168645 654 + 0.324159
NA pc1492 conserved hypothetical proteinchromosome CDS1777019 879 + 0.327645
NA pc1399 unknown proteinchromosome CDS1675345 993 + 0.387714
NA pc0986 conserved hypothetical proteinchromosome CDS1181699 261 + 0.360153
NA pc1195 conserved hypothetical proteinchromosome CDS1428388 231 + 0.428571
NA pc1484 conserved hypothetical proteinchromosome CDS1759218 3771 - 0.333599
NA pc0987 conserved hypothetical proteinchromosome CDS1182166 336 + 0.369048
NA pc1274 conserved hypothetical proteinchromosome CDS1526503 417 + 0.366906
NA pc0647 unknown proteinchromosome CDS795065 684 + 0.317251
NA pc1280 conserved hypothetical proteinchromosome CDS1534434 303 - 0.316832
NA pc1621 unknown proteinchromosome CDS1941388 582 - 0.347079
NA pc1001 conserved hypothetical proteinchromosome CDS1192289 378 - 0.373016
NA pc0527 conserved hypothetical proteinchromosome CDS660518 213 + 0.422535
NA pc0245 unknown proteinchromosome CDS344266 366 - 0.368852
NA pc1124 putative calcium-dependent protein kinase 9chromosome CDS1348161 1395 + 0.311111
NA pc1281 conserved hypothetical proteinchromosome CDS1535447 222 + 0.342342
NA pc1230 unknown proteinchromosome CDS1464063 1266 - 0.370458
NA pc0043 unknown proteinchromosome CDS72654 1329 - 0.358916
NA pc0279 hypothetical proteinchromosome CDS390366 1518 + 0.348485
NA pc1087 hypothetical proteinchromosome CDS1301057 1146 + 0.315881
NA pc1917 conserved hypothetical proteinchromosome CDS2280713 249 - 0.385542
NA pc1215 conserved hypothetical proteinchromosome CDS1446294 381 + 0.446194
NA pc1201 conserved hypothetical proteinchromosome CDS1433201 711 - 0.329114
NA pc0528 conserved hypothetical proteinchromosome CDS660745 723 + 0.40249
NA pc1160 conserved hypothetical proteinchromosome CDS1388187 480 + 0.360417
NA pc1426 conserved hypothetical proteinchromosome CDS1700887 495 - 0.331313
NA pc1100 hypothetical proteinchromosome CDS1319229 1032 - 0.35562
NA pc1000 conserved hypothetical proteinchromosome CDS1191462 813 - 0.387454
NA pc1097 unknown proteinchromosome CDS1315713 2091 + 0.338594
NA pc1859 conserved hypothetical proteinchromosome CDS2219638 597 + 0.346734
NA pc2023 hypothetical proteinchromosome CDS2404926 1452 - 0.318871
NA pc1051 unknown proteinchromosome CDS1251338 453 + 0.335541
NA pc0645 conserved hypothetical proteinchromosome CDS793583 276 - 0.293478
NA pc0863 hypothetical proteinchromosome CDS1044121 1014 - 0.320513
NA pc1200 conserved hypothetical proteinchromosome CDS1432859 357 + 0.341737
NA pc1402 conserved hypothetical proteinchromosome CDS1679924 477 + 0.440252
NA pc1618 unknown proteinchromosome CDS1936373 2781 - 0.296296
NA pc1039 unknown proteinchromosome CDS1235690 2607 - 0.322209
NA pc1203 conserved hypothetical protein (chlamydia plasmid)chromosome CDS1434620 483 - 0.397516
NA pc1322 unknown proteinchromosome CDS1578026 333 + 0.318318
NA pc1637 conserved hypothetical proteinchromosome CDS1958934 453 + 0.344371
NA pc0857 conserved hypothetical proteinchromosome CDS1038389 246 + 0.422764
NA pc0498 unknown proteinchromosome CDS638378 327 + 0.314985
NA pc1650 conserved hypothetical proteinchromosome CDS1982447 273 + 0.369963
NA pc0808 hypothetical proteinchromosome CDS987525 366 - 0.346995
NA pc1645 conserved hypothetical proteinchromosome CDS1975141 2949 + 0.3608
ada pc1835 putative methylated-DNA-[protein]-cysteine S-methyltransferasechromosome CDS2193352 522 + 0.3659
alkA pc1834 putative DNA-3-methyladenine glycosidase IIchromosome CDS2191751 1431 - 0.385045
alkA pc0503 putative DNA-3-methyladenine glycosylase IIchromosome CDS641984 414 + 0.31401
alkB pc0286 probable alkylated DNA repair proteinchromosome CDS397258 669 + 0.373692
deaD pc1265 putative ATP-dependent RNA helicasechromosome CDS1510740 1224 - 0.373366
deaD pc1559 putative ATP-dependent RNA helicasechromosome CDS1868321 1548 - 0.391473
dinG pc0176 putative ATP-dependent DNA helicase dinGchromosome CDS264440 2262 - 0.383731
dinP pc1820 probable DNA polymerase IVchromosome CDS2174317 1053 - 0.348528
dnaA pc1082 putative chromosomal replication initiator protein, dnaAchromosome CDS1295440 1356 + 0.370944
dnaA pc0307 putative replication initiation protein dnaAchromosome CDS424280 1386 - 0.354257
dnaB pc1810 putative replicative DNA helicasechromosome CDS2162991 1446 + 0.372061
dnaE pc0389 putative DNA polymerase III, alpha chainchromosome CDS519804 3759 + 0.366853
dnaG pc0690 putative DNA primasechromosome CDS839989 1779 + 0.364812
dnaN pc1705 putative DNA polymerase III, beta chainchromosome CDS2043622 1212 + 0.371287
dnaQ pc1161 putative DNA polymerase III, epsilon chain, mutDchromosome CDS1388733 651 + 0.387097
dnaQ_2 pc0236 putative DNA polymerase III epsilon chainchromosome CDS332959 750 + 0.337333
dnaX pc0478 probable DNA-directed DNA polymerase III subunits gamma/tau dnaXchromosome CDS614128 1569 - 0.369662
dnlJ pc1760 probable DNA ligasechromosome CDS2103293 1998 - 0.365365
dprA pc0072 putative protein required for chromosomal DNA transformationchromosome CDS131167 1092 - 0.346154
gyrA pc1074 probable DNA gyrase subunit Achromosome CDS1281957 2571 - 0.395177
gyrA pc0351 putative DNA gyrase (topoisomerase) chain Achromosome CDS478308 1902 + 0.345426
gyrB pc1075 probable DNA gyrase subunit Bchromosome CDS1284615 2508 - 0.375997
gyrB pc0350 putative DNA gyrase (topoisomerase) chain Bchromosome CDS476407 1821 + 0.343767
himD pc1168 putative integration host factorchromosome CDS1396313 363 - 0.38843
holB pc1072 putative DNA polymerase III, delta' subunit, holBchromosome CDS1280171 1110 - 0.341441
lig pc0950 putative DNA ligasechromosome CDS1147931 1593 - 0.354049
mfd pc1521 probable transcription-repair coupling factor mfdchromosome CDS1823883 3306 + 0.377495
mutD pc0034 probable ATP-dependent DNA helicasechromosome CDS51894 2286 + 0.360018
mutL pc0139 putative methyl-directed mismatch repair (MMR) protein, mutLchromosome CDS212429 1959 - 0.350689
mutM pc0892 putative formamidopyrimidine-DNA glycosidasechromosome CDS1076920 831 - 0.369434
mutS pc1221 putative DNA mismatch repair protein mutSchromosome CDS1452876 2577 + 0.365541
mutT pc1237 putative dGTP pyrophosphohydrolase, mutTchromosome CDS1473872 354 - 0.370057
mutT pc1646 putative mutT proteinchromosome CDS1978076 564 + 0.384752
mutY pc0089 putative A/G-specific adenine glycosylase, mutYchromosome CDS149879 1059 + 0.353163
nfi pc0623 probable endonuclease V (deoxyinosine 3'endonuclease)chromosome CDS764994 708 - 0.370057
nfo pc0345 probable endonuclease IVchromosome CDS469268 849 + 0.355713
nth pc0021 probable endonuclease III (UV endonuclease)chromosome CDS32733 642 - 0.378505
pcrA pc1601 probable ATP-dependent DNA helicase, mutUchromosome CDS1915865 2007 - 0.347783
phrB pc0672 putative photolyasechromosome CDS816135 1416 + 0.363701
pkn pc1401 putative serine/threonine protein kinasechromosome CDS1678055 1590 + 0.368553
polA pc0223 probable DNA polymerase Ichromosome CDS315596 2676 - 0.346413
priA pc1225 putative primosomal protein N'chromosome CDS1457750 2238 + 0.374888
radC pc1765 putative DNA repair protein radCchromosome CDS2117803 696 - 0.37069
rapA pc0375 putative rapA, a bacterial member of the swi/snf helicase familychromosome CDS500248 2682 - 0.35645
recA pc1995 probable recombination protein recAchromosome CDS2376732 1086 + 0.388582
recB pc0009 putative exodeoxyribonuclease V beta chainchromosome CDS15358 3501 + 0.342188
recC pc0008 putative exodeoxyribonuclease V gamma chainchromosome CDS11759 3588 + 0.338907
recD pc0689 putative exodeoxyribonuclease Vchromosome CDS837508 2166 - 0.361958
recD pc0010 putative exodeoxyribonuclease V alpha chain recDchromosome CDS18855 1869 + 0.346709
recF pc1706 putative DNA replication and repair protein recFchromosome CDS2044842 1080 + 0.353704
recJ pc0249 putative ssDNA-specific exonucleasechromosome CDS349036 1785 - 0.359664
recN pc0677 putative DNA repair protein RecNchromosome CDS825630 1626 - 0.346248
recR pc1724 probable recombination protein RecRchromosome CDS2061749 597 + 0.39866
rnh pc0658 putative ribonuclease HIIchromosome CDS803632 669 + 0.402093
rnhB pc0679 putative ribonuclease HIIchromosome CDS827796 906 - 0.362031
ruvA pc0020 probable Holliday junction DNA helicasechromosome CDS32105 606 + 0.369637
ruvB pc1108 probable holliday junction DNA helicase, ruvBchromosome CDS1328687 999 - 0.386386
ruvC pc0019 probable Holliday junction endodeoxyribonucleasechromosome CDS31580 507 + 0.380671
ssb pc1104 putative Single-strand binding proteinchromosome CDS1323731 477 - 0.392034
tag pc1338 probable 3-methyladenine-DNA glycosylase Ichromosome CDS1594745 567 - 0.377425
tatD pc1844 putative deoxyribonuclease TatDchromosome CDS2204540 798 - 0.37218
tnpA pc1470 probable transposase, partial lengthchromosome CDS1745807 531 + 0.382298
tnpA pc1471 probable transposase, partial lengthchromosome CDS1746372 321 + 0.439252
tnpR pc1469 probable resolvasechromosome CDS1745398 558 + 0.44086
topA pc0071 putative DNA topoisomerase Ichromosome CDS128482 2604 - 0.378648
topI pc1182 putative DNA topoisomerase Ichromosome CDS1410213 1077 + 0.357474
umuC pc0975 putative SOS mutagenesis and repair protein UmuCchromosome CDS1173751 1182 - 0.36802
ung pc2012 probable uracil-DNA glycosylasechromosome CDS2390751 711 - 0.368495
uvrA pc1641 probable excinuclease ABC subunit A, uvrAchromosome CDS1965994 5703 + 0.381203
uvrA pc1245 putative excinuclease ABC chain Achromosome CDS1483362 2814 + 0.367448
uvrB pc0174 probable Helicase subunit B of the DNA excision repair complex (excinuclease ABC)chromosome CDS260950 2022 + 0.391197
uvrC pc0697 putative Excinuclease ABC subunit Cchromosome CDS848522 1833 + 0.37916
xerC pc0458 putative XerC Proteinchromosome CDS587087 990 - 0.349495
xerD pc0783 probable XerD proteinchromosome CDS965289 876 + 0.350457
xseA pc0621 putative exodeoxyribonuclease VII, large chainchromosome CDS761853 1449 - 0.329883
xseB pc0620 putative exodeoxyribonuclease VII, small chainchromosome CDS761582 279 - 0.340502