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2024-05-18 23:04:47

Gene list

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COG category: Replication, recombination and repair
Organism: Bartonella henselae, Houston-1

Number of genes found: 93

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Bartonella henselae, Houston-1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
NA BH07790 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS885895 288 + 0.420139
NA BH02880 hypothetical phage integraseSubName: Full=Hypothetical phage integrase; chromosome CDS371485 1158 + 0.41019
NA BH10240 ATPase, aaa familySubName: Full=ATPase, aaa family; chromosome CDS1139342 1320 - 0.423485
NA BH06470 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome CDS759884 1404 - 0.386752
NA BH12280 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1368217 714 - 0.347339
NA BH14360 Resolvase fragment homolog chromosome CDS1641708 156 - 0.403846
NA BH05460 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS634674 465 + 0.384946
NA BH04050 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS464624 1689 - 0.348135
NA BH04820 Methyltransferase (fragment)SubName: Full=Methyltransferase; chromosome CDS558944 525 + 0.380952
NA BH07720 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS883273 495 + 0.337374
NA BH10910 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1199465 1122 - 0.427807
NA BH08490 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS955825 774 + 0.352713
NA BH08220 hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS928617 480 - 0.395833
NA BH12350 hypothetical proteinRecName: Full=UPF0102 protein BH12350; chromosome CDS1375606 381 - 0.44357
NA BH02620 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS343983 570 + 0.433333
NA BH09020 hypothetical genomic island proteinSubName: Full=Hypothetical genomic island protein; chromosome CDS1014469 882 + 0.43424
NA BH14520 phage related proteinSubName: Full=Phage related protein; chromosome CDS1658982 2760 + 0.471014
NA BH04850 DNA polymerase, bacteriophage typeSubName: Full=DNA polymerase, bacteriophage type; chromosome CDS564775 828 - 0.392512
NA BH08120 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS914343 636 - 0.36478
NA BH05020 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS587682 669 - 0.428999
NA BH06830 Integrase /recombinaseSubName: Full=Integrase /recombinase; chromosome CDS806463 1038 - 0.397881
NA BH03630 hypothetical prophage proteinSubName: Full=Hypothetical prophage protein; chromosome CDS419607 453 - 0.322296
NA BH09540 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1047289 690 - 0.372464
NA BH00280 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS31415 3123 - 0.410183
NA BH13190 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1499323 444 - 0.337838
NA BH16160 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1866465 2436 - 0.399836
NA BH13250 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1511669 744 - 0.395161
NA BH16220 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS1876043 1053 - 0.402659
NA BH11440 phage related proteinSubName: Full=Phage related protein; chromosome CDS1264198 315 - 0.365079
NA BH08130 hypothetical proteinSubName: Full=Putative uncharacterized protein; chromosome CDS915028 513 - 0.358674
addA BH00270 ATP-dependent nuclease subunit ASubName: Full=ATP-dependent nuclease subunit A; chromosome CDS27936 3483 - 0.398507
ccrM BH04530 Adenine DNA methyltransferase proteinSubName: Full=Adenine DNA methyltransferase protein; chromosome CDS521989 1137 + 0.386983
dinJ1 BH02910 DNA-damage-inducible proteinSubName: Full=DNA-damage-inducible protein; chromosome CDS373624 276 + 0.438406
dinJ2 BH03400 DNA-damage-inducible proteinSubName: Full=DNA-damage-inducible protein; chromosome CDS407809 264 + 0.405303
dnaA BH01180 Chromosomal replication initiator protein DRecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS158771 1572 + 0.410305
dnaB BH05270 Replicative DNA helicaseSubName: Full=Replicative DNA helicase; chromosome CDS614655 1488 - 0.392473
dnaC BH08470 DNA polymerase III, delta prime subunitSubName: Full=DNA polymerase III, delta prime subunit; chromosome CDS953162 1053 + 0.349478
dnaE BH09850 DNA polymerase III alpha subunitSubName: Full=DNA polymerase III alpha subunit; chromosome CDS1084619 3489 - 0.394669
dnaG BH11540 DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1275067 1938 - 0.397833
dnaN BH01190 DNA polymerase III, beta chainRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS160539 1122 + 0.407308
dnaQ BH00050 DNA polymerase III epsilon chainSubName: Full=DNA polymerase III epsilon chain; chromosome CDS2896 708 + 0.365819
dnaX BH02320 DNA polymerase III subunit tauSubName: Full=DNA polymerase III subunit tau; chromosome CDS307669 1941 - 0.394127
dprA BH08170 DNA processing chain ASubName: Full=DNA processing chain A; chromosome CDS922777 1233 - 0.423358
gp11A BH03610 hypothetical prophage proteinSubName: Full=Hypothetical prophage protein; chromosome CDS418218 477 - 0.454927
gp11B BH06960 hypothetical genomic island proteinSubName: Full=Hypothetical genomic island protein; chromosome CDS813167 480 + 0.447917
gyrA BH10120 DNA gyrase subunit aRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS1120562 2796 - 0.432046
gyrB BH00410 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS53453 2433 - 0.426223
hupB BH05910 DNA-binding proteinSubName: Full=DNA-binding protein; chromosome CDS695069 276 + 0.427536
ihfA BH07640 Integration host factor alpha-subunitRecName: Full=Integration host factor subunit alpha; Short=IHF-alpha; chromosome CDS876847 327 + 0.388379
ihfB BH00140 Integration host factor beta-subunitRecName: Full=Integration host factor subunit beta; chromosome CDS14335 279 - 0.415771
invA BH01640 Invasion-associated protein ARecName: Full=RNA pyrophosphohydrolase; EC=3.6.1.-; AltName: Full=(Di)nucleoside polyphosphate hydrolase; chromosome CDS227284 522 + 0.377395
ligA BH11140 DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1225998 2151 - 0.413296
mfd BH08750 Transcription repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS986691 3507 - 0.381523
mutL BH02690 DNA mismatch repair protein mutLRecName: Full=DNA mismatch repair protein MutL; chromosome CDS353376 1839 - 0.409462
mutM BH02510 Formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase MutM; Short=AP lyase MutM; EC=4.2.99.18; chromosome CDS329258 876 + 0.385845
mutS BH01000 DNA mismatch repair protein mutSRecName: Full=DNA mismatch repair protein MutS; chromosome CDS136627 2745 - 0.423679
mutT BH02020 Mutator mutT proteinSubName: Full=Mutator mutT protein; chromosome CDS273702 414 + 0.369565
mutY BH04540 A/G-specific adenine glycosylaseSubName: Full=A/G-specific adenine glycosylase; chromosome CDS523173 1107 - 0.399277
nth BH00810 Endonuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS106095 741 + 0.404858
parC BH09780 Topoisomerase IV subunit aRecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS1071815 2250 - 0.389333
parE BH07840 DNA gyrase subunit BRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS890775 2058 - 0.407677
polA BH00060 DNA polymerase ISubName: Full=DNA polymerase I; chromosome CDS3932 2907 + 0.387341
priA BH15360 Primosomal replication factor ySubName: Full=Primosomal replication factor y; chromosome CDS1768572 2211 - 0.473994
radC BH08340 DNA repair protein radCSubName: Full=DNA repair protein radC; chromosome CDS939706 795 - 0.368553
recA BH10230 recA proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1137683 1044 - 0.403257
recF BH01200 DNA replication and repair protein recFRecName: Full=DNA replication and repair protein RecF; chromosome CDS161681 1134 + 0.411817
recG BH09860 ATP-dependent DNA helicase recGSubName: Full=ATP-dependent DNA helicase recG; chromosome CDS1088518 2109 + 0.404931
recJ BH07830 Single-stranded-DNA-specific exonucleaseSubName: Full=Single-stranded-DNA-specific exonuclease; chromosome CDS888969 1785 + 0.415126
recN BH11150 DNA repair protein recnRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS1228280 1662 - 0.436823
recO BH05110 DNA repair protein recoRecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS595825 771 + 0.403372
recR BH02300 Recombination protein recRRecName: Full=Recombination protein RecR; chromosome CDS306688 606 - 0.422442
rhlE BH10750 ATP-dependent RNA helicaseSubName: Full=ATP-dependent RNA helicase; chromosome CDS1175998 1383 - 0.395517
rnhA BH04430 Ribonuclease HIRecName: Full=Ribonuclease H; Short=RNase H; EC=3.1.26.4; chromosome CDS509648 468 + 0.416667
rnhB BH04230 Ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS487066 672 + 0.434524
ruvA BH14900 Holliday junction DNA helicase ruvARecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1710177 618 - 0.423948
ruvB BH14890 Holliday junction DNA helicase ruvBRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS1709079 1086 - 0.447514
ruvC BH14910 Holliday junction nuclease ruvCRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS1710791 510 - 0.452941
ssb1 BH03540 Aingle-strand binding protein SSBRecName: Full=Single-stranded DNA-binding protein; chromosome CDS414599 447 - 0.387025
ssb2 BH07030 Single-strand binding protein (ssb)RecName: Full=Single-stranded DNA-binding protein; chromosome CDS816716 447 + 0.384787
ssb3 BH09470 Single-strand binding protein (ssb)RecName: Full=Single-stranded DNA-binding protein; chromosome CDS1043819 447 - 0.384787
ssb4 BH10130 Single-strand binding protein (ssb)RecName: Full=Single-stranded DNA-binding protein; chromosome CDS1123590 519 - 0.39499
tag BH12210 DNA-3-methyladenine glycosylase ISubName: Full=DNA-3-methyladenine glycosylase I; chromosome CDS1360985 627 - 0.371611
topA BH08160 DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS919836 2562 - 0.39071
uvrA BH10140 Excinuclease ABC subunit aRecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS1124449 2916 + 0.407064
uvrB BH11720 Excinuclease ABC subunit bRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS1302752 2313 + 0.404237
uvrC BH05550 Excinuclease ABC subunit cRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS651275 1986 - 0.382175
uvrD BH11070 DNA helicase IISubName: Full=DNA helicase II; chromosome CDS1217573 2337 + 0.397946
xerC BH15850 Integrase /recombinase xerCRecName: Full=Tyrosine recombinase XerC; chromosome CDS1826946 981 + 0.433231
xerD BH16350 Integrase /recombinase xerDRecName: Full=Tyrosine recombinase XerC; chromosome CDS1890432 939 - 0.42918
xseA BH12220 Exodeoxyribonuclease large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS1361589 1428 - 0.426471
xseB BH04340 Exodeoxyribonuclease small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS499587 255 + 0.384314
xthA1 BH10570 Exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; chromosome CDS1161536 783 + 0.38825
xthA2 BH15490 Exodeoxyribonuclease IIISubName: Full=Exodeoxyribonuclease III; chromosome CDS1794909 810 - 0.412346