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# Bdellovibrio bacteriovorus, HD100 = DSM 50701 = ATCC 15356 = ICPB 3268 NCIB 9529

>Bd2680 hypothetical protein predicted by Glimmer/Critica
MRFIFQTSHVRAEGNEVWSKLNQSEVSYLLNLSEQARQRKKAFYYSIQLY
DGNKTLYPFLFIDIDSKDLEASLTVTIAIVKEFIEKGLTFDKDFSVAFSG
SKGFHILLNTKAIFGFIPDSDLFPPKQQKDLVKKIFSELVPSMSEYLDDS
IFGTHRMMRAEYSINNKSGLYKTPLTLNDLGAGLSNILTLAKRSQPVTTE
FYSRFEISDGKNEFLSQLLGNLSVENEDVGVERERKKRTIKKSRISKSND
TNAYVSYYSCRALRQLGSKIISTHDADHNERLALASALKDSDLRDKLVHE
ILSKTEKYKRTITQEKIDGLNFVGTCEMLHEKGICKELCDRYKGKTKSEI
QYPGYLSKRSSDVDSWDHLASSENIKNVAVKLLNYHTTTTDFFDWTNAKQ
FLDQVDLFAIGVSDYLRRLAIPESTGLLIKVLKQENAQRDLVRVGFETEL
LSSLFCEKGLRNNKKFKVENIKNPSVHSFGYQQSDTSGKALIGSWRAEYS
DFRNTLKSIAETTPHALVLSTDLKSFYPKITSEHAKRLIGEIFKDARIID
VVSSTSKASLKNYRDGAAVARDTGLPQGPLIAHVIASRLLLKIDAQISNS
VSPNDFQMVRYCDDFHFFIKDHSVLSRIQGLLNELEEKFEVSFHKEDGSE
KVSLFEIEEYRQNQLDNDLYKYQVRFESELSKVDPDEKRELLRVITRLFD
SRLKKYLSGDSGVNIKDLERDISAMQWRIPELVMDGVNFKEEILSLGSVI
CKFLESPILSHKLRTSLSGLLLGFVISLHEEIGELKELFLKLYMNGRKDC
QENILSLLVRELCLDGSARVKAIGTEILKVDLSGSSHKSLLFDMLLKEIE
YLVDDNRVFDEKIWGVGADVGHKNLAGIVRDLQQMEISPDGFRKICVESG
TIFNFQVKYFVDQIIKMHDGLSMPERYAFFKVAYDYSIHPVKEVFWADFD
SFLDQKLVSRQEDDFIQGHTALLKKMIFEMTKREPDRIEIVNKVNSMKII
GDGENYYTISFPNLVNFPGISNKKMIFAAKKLNSLSKLGEVMLHIDEKTK
EIALVYKFPKIDIDDLSSYLDSSNSFDDILGAELFLFQDQDRLVDLILSA
KNLGLARDRNTTKIIPLDVSQVLKDTINGTYTFKNESVVKVVNRKKSILP
GRRIMEFNAACGVNDAKSFSYGLGGWEFLNTLQDSSKASFFNKKPSDVAS
KISSIKRYGSWIMKGEANKSADLVNFYCYSIFRDLYKRHRKVRLRQGTSS
VMFVNYEILQNAKHILGIVPDKREGINQNLYRFVREDIELHKEFKTKNLP
SIDLVTGYSLLFLYKSIDKYSMSDRAAVVTLALVGLVQIRNSMEELGSTY
DIASGSKQSLEKEINSFFDDLEKLLRVNYLSPDLSNFKVYEDLLERRFND
IFDELGALRLRKLKLQKIRKVIDVEPTFAEDEAERQKQISTNFENIHLKY
DVVRSDGIEIFGVLFFDKIVDYLRPETGTYLKDSFSRLHSWKVDTHDLLE
KHGFVTTAHDKHVISCYPSGLIFYPRKRFGDSKLDWKKVLLLYLLSFICL
GLIAKFWEKIIEALWLAIASMF
>Bd2100 hypthetical protein
MSSISSSDRARQDEKIRKTREEYENRESENAKRRNAELKRLEQRHHEEIK
NITDEYEGRIAELKDRSRESLSERDYENSKKIDEVRQTYRESLRNKTEEA
YNAREEQKAAYESTIKKQKEINESQKQNLVGQLNSEIGNRDERFVTAIEE
NRTKSQKAIHENARKLNEAHERERDAILSSHDETLRSKDRNEREMRKSYE
ARLKQTERQREADNSRWSQKYSDYVTNSKEEFGDNLQMKQEIMDQERVAV
RDKYENTLAQKSNLMDEQNQNFRDSVNGRINSQIRSRDSQIQRLNSQFNN
EISKNQRLRGIERRNLTQAYEKRLGLSEEQRENAVDRMKEINDERIGKVL
TENQKLLRNTDRENKSQVSIMNTRHREERENLLTAHKDQVTQVANNAEAR
VKKVIDLTNKNQDQLGRYYNDSLDVMKSNYMERMDVVREKNSADHLALNK
NMTERFRTMEASFNSKLEQTVKTYEDRLAALKDSQDRELKRIEKMYATRV
DERDKSGKMEKESMQMKYEAKIAQLNNSHQDQLDRMNRRHQEDMQNLSVK
MSSYSRKA
>Bd2355 Hydrolase, TatD family
MVGFGYWIDAHGHLADLRWQGQVDTIIDEARTKGIAFFMQGGVDPEDWQR
QREIKARYPSHIGLCFGLHPYWVAAHDDDECEQALDLLAQALPEADGLGE
LGLDFRPNIMKDSMERQIGVFEQQLELGHITGKPLVLHLVQAHEESLKIM
DVWGLPKQKGMVHSFNGSAYKAQEFLQRGLMLSIGGPVCRPDNQKLHQAV
REIPLEQLLIESDSPDQGPPAYKGRLNPPESIWEVARTIGELKSLDPLEI
LDITTANFRRLFHGNHTIT
>Bd3139 probable exonuclease RexA
MTQTFLDFAKAFKAKHKKFPRIVVTTFTRKATQELKERLVGKALVEEETD
EKNKGLFQFVSSKSQVQISTIHGVLSLFLSRYGSAIGLTPDYKIMSESEI
RKGARKIMRKYLLENPQLQELLEEYDFQTLEGALLKYFGEQVIFPGMTFI
RRGEMEKETAKFVADIGGALRRVCLEISQETSNDKWVDYAGAMTGFDWNA
SNGDWEGFFARLESFWENISKPVFRKATPPFSLSLNEELEELRDRVDRLL
AEPRYRPEYWDRHEKNCALFEELAQNFCRDFMQTKLESGLLSMSDLETLA
SKITLDQPEAAVKFSQEWDFWMVDEYQDTSPVQVELLRHLVGEKPVFIVG
DPQQSIYLFRGARSEVFREKVAEIEAQQGDVQVKLVNYRSSPEVLEFFNH
YFTRLGSQFAAMTPDEKKPKKGPEVPVVQVVLSETGDEDETSAEILATVA
RIQELLQAGTSPEQICVLGRTHRTLEDIAKVAQEYGVPLQLHSGSGFYER
REVLDALAVLKFLVNPHDNANFVALLRSPWLALPDSEILSYCHSFRHSFW
KEAQKNLDQKPEIHPLRVMKALLAQAEVKGLSWTLKKALIDLGLFDYSAR
IDSTGRREANLWKVVSLLSQEERRPGFNYLDFLDSSLETLSTDEGGEDAD
ATPVIEPKRVNFMTVHASKGLQFDQVILPGMGNDPRASHAPVLSIHEKTG
LWSLKVRNEETQAMAGSVLADQIVEELRKRETEEFNRVLYVALTRAKSGV
TLLWDKKVGKKSWAAHCPLNLEEGLHEEKDFSYVVRSENPQPVKMSEQDL
AEKDLRPQWQAEASEKRKYISVTELVTPEGVQAGGGYTPKASQLGAGLAR
AQQGTNAHRLFEALKFTSFDELLKISDEDLKKPLEFLAKTPELPLLRIIN
EGFVEWGFALKYKEALMQGQIDLWGVVDGTLWMVDYKTGSQRYSDTAFRQ
LEAYTWALYRMKYLDNVQQVKLAVVYPVDEVVKIEALGSLKELNERLEKS
IDNYFLV
>Bd0639 hypothetical protein
MKSHCLKIVFAIFTLPVFAKADVVANPEVYSAIESLSKYVQQKDDSFNAG
VMYRKILENTEEKGVVEGLAIPIGKFYLMEKDPAARRNLKAVLSGINIEV
EEDSTAEDQSNRHHRNNQNLVIDRDKCVATCIDDVIDGARDGAAIGTAIG
IGGGPQVGAAGAAGGAVIGGALGGVKCSRKPECNDDKSKDVVSPNAQDRA
RVYFTVEGNMQTKMRIVVNNGHRIPGGF
>Bd1320 hypothetical protein predicted by Glimmer/Critica
MSMNTLPPVAKSFFAFCKKCDADRYHVVLAHTSATSAKIKCEICGSQKTY
SLPKAQTKTGKPLTGAAAKKREQTMSSRKSSHRNEYDMLMSNDGAATATY
SMKGKFEKNTKLQHPKFGLGFIKDAMTDKIEVVFEDEVRTLIHNRQ
>Bd2755 putative ATP/GTP-binding protein
MLRSYKDDREYYASLPKKRIGVGVLLFYKGELLIVQPTYNPAWILPGGTV
EAEESPSEALQRELKEELGLNIQAGSLLAVDYVSNRDVKGEYMQLLFSAK
NLTEYQAQNIRLPMYEIKDFKFVAVEKALEMLTPIVSRRVHSVMLAQEQG
LGAIYLEEGRPFYDPLRLAIADPYSLPKT
>Bd2362 conserved hypothetical protein
MNRFFVATPLDFEKLALAEMKEVWPFLLGKDAKPHSLPFPEVTVLEGGFE
FETELFIGLQLNFFLKTANRVLLRMTSFKAKDLPKFYQKFKALPWIDFLP
HAHVEWEVAAQKSRLNNEKRLQESAEAALTEIFKGVKGKETCASIYIRMD
DDNCTISLDSTGEHLHKRGWATLKGEAPLRETLAAILLKEIIGNSNPAET
AQITLLDPMMGSGTFLCEARALWAGQFVRDFAFKKWKRAPKLFQSSSFAL
NYKLPATHPFKAYVGFDIDADMIPAAEGNFSEVERQLQAVQKAAFVKAPH
KFIHGNSLEASEDVGPSWLVVNPPYGERLPVAGSGGLKALAKLLCERHKP
LKLGILYPEKERLGTVPAGYKLLKEVKINNGGLRCLFTVLTRL
>Bd3065 hypothetical protein predicted by Glimmer/Critica
MKYSESDLILHAISTQGEKLSFMARGALKSKKRFGGGVLEPTHFVSLTYK
QSAEEGKLHVLQEATLINDFAGLRTDYDRLELALHILECVSKVSQEGDRH
SEFLFNLLGHTLRALETAQDPLIVKMHFYLKFLLQQGVVDAEPWMAPFLK
TNMADSNQLVSYRQTVDDELKNVEQMVRHYIVNATL
>Bd0711 DNA-binding protein HU
MTKADLINLISEKAGITRVKAETVVNTIFDSMVEALMRDDRIEIRGFGSF
VNRQYGAYKGRNPRTGEIINVDEKKLPFFKVGKELKEDINGGPEEKG
>Bd3500 Uracil-DNA glycosylase
MSGQEDWHRKNNLKSNRFALESRTWTMDLCQIEMENINSEIKLDSSWKQH
LHLEFETERMQKLNKFLSAEYKAGKTIYPHGDDYFAAMNLTPFDKVKVVI
VGQDPYHGPGQAHGLCFSVQDGVRFPPSLRNIFKELHDDVGATIPQSGSL
TKWAQEGVLLLNAVLTVEDGKAAAHQGKGWEEFTDKIIHVLNEEKENLVF
ILWGSYAQKKASFVDRKKHLVLEAVHPSPLSAHRGFFGTKPFSKTNAYLK
SKGIGEINWNLV
>Bd0746 hypothetical protein predicted by Glimmer/Critica
MLLKTLFPIFLICLNSAFSVAVAAEKRNQLEELLIWKMSDELKLNTSDEK
KFTEIVRDINKRKAQFSQELQASVDKMNKATTAKSKDEELTRYRKSLQSY
GRMNEEEFDKLKPLLGPERMVQYLQIKQDLTNRIKTMLANPEATPGKAAK
PLPSPKLIEEK
>Bd0003 DNA repair and genetic recombination protein
MIFERLRLVNFRNYRDVVLSFSPRVNVFLGENGQGKTNLLEAMYMISQGD
SFRYSDNSTLINTNTSESVIQALITQNDLHYKLKLGLSKSRKVLTLNDKR
VNSADIRKIFASVVFSPESLSSIKEGADHRRELVDELLVTFDRKNAQLIA
DYRKALKTRNKILKNFLEGLQDKVVTQNLLESLNPQFVRLATDLTHARIT
ALHGLSKDFNNAMQYISGNSSVDISVEYLVSDQNAVSFTREEVENAITKR
LRELHDAELSSGTSLVGPHKHDIVFLYGQKDSRFFCSQGQQRAIILSFKM
AQIVYHRKAHGTYPVLMLDDVLSELDKAKRDALITFLHEINTQIFVTTTD
FTLPESFSLDQLRVVRIKDGQILE
>Bd2400 putative cell surface protein
MNYGRVLLPLSLIVLAGCQKSALSEGSADTMEAASYCAGQLSKASSEDVR
IVGKSATEAGSTVSYSLDQAGNCVSSSDVTWKVAGASRTKTSASGMTSTF
KLAGTYVVTAQEKTSGSEDISLSLVTTVVKEDLKISGPQAGFVFNPMSFE
VVIPSGVDAQSIVWNFNDGTATVSNARTVEHSFFNVGTYQVQATVTDADG
KVTVASHRVTVMTVIDDMDCLEDLRISGANEAKVKIATMMHVYLPACLVN
KVGAVRWNFGDGGTAANQSVTHAYQTVGTYAVTATLYLGDNQEPWVTLDH
SIRVIEDLDVDPEPEVPVDPNACTVAGATRESQGELVSEEVACGVNGKKT
VSYRDRVVEECKLVVEKLNWVEVSRTKEITNEGSCEGQSCKLPDGSLLAH
GASQVLYSNSTPVGSCSSVSESRTCNNGVLSGSSTHNQVTCHEGCGSFGS
HGTVKTGVITGETKVPLKCSFNEEGFFDLYNEISDQTCTDGQIISSNTRQ
GTMKEAGKCPVYKYAPTDNFTACTADCGGKQNRIFVCVDDKGVTVDDSRC
ADQVKPVEERLCDANPEAVRSQSSVTTIEEANSSATCPANQIGVIVKTRE
VVTTKTMACIDHSVQLESEVAVPGAWVEEKYCRDYVARRCSHDSLSNTEA
KGRYDWMVKCQDELPVIKEFLTSFANVTVTVGGKKVGLGSSGQEIYATFM
DRAYNPEKAWIAPKKANAPCTMPATAYVATVCVSSCATPEQQILAEEVVS
KKLKYMSFFDALTSQSAYVGTMQSADSLNKNAVVKTKVDQWVTELVDGDH
EILVFKMKSGRELRVTKNHPILSQDGSMKVAEEFKVGESLVQSGGTLDAI
VSINEIKYFGKVYNVFVQSNAPHKNVVLINGYLNGSAFFQNAGAKEMNRT
IFRNNMTRGVFGK
>Bd0920 conserved hypothetical protein
MLKPCALTIATFLTIAGCASKSKEATDLDQRIKSERPADTPEEIAQRAAD
VFSSAPGMTTEQRTKLNALYLRTYADSRQIRKEIGQMKSLLFKEAATKKF
KSKDINELTSRIIDADQRRLNLMFRALEEMQTIVGTGEDKKELYEYLRQY
DYPGTGLR
>Bd0255 similar to ATP dependent helicase
MRKVSLDVRQFALPCPRRGSIELHSGYGAPPMSGQEIHMAIQRRRQREFD
DYTPEKKMSWVFEAGPYEFHISGRADGITENPVQIEEIKTAFDVEELWRK
LRSDDNHPYIWQLRTYGYFHYKETGRIPFLNLHLVSSRNFKSMDLRVELD
IAHYELWLALRLDELVEETKVKEKLFKARQKMAEEMSFPFATPRPGQREL
IEGIEAQVADEHPLLVQAPTGLGKTVGVLYPNLKDSLSRGQKTVYVTPKN
SQHIVAEEAVEKLQEQGSKIRSLTLTAKSKMCLKAETLCNPGYCEFARDY
YTKLAEHDLVNKLSKKRKLTQEKLVEMGKEFEVCPFELSVEAIERADVVI
GDYNYAFAPRSLLGRLSEPLLEAGEKPNLVIDEAHNLPSRAQDYFSPSLS
VQELDILEGDFTKLPPTFSLQAGSLIRKAKSLIQEYGEDGGSRKVDIDIE
PFLEHERSIRALTTEYLDSDTEIITRDPMLRLMNLWSEFIAALEYRGPEF
FTTYQNSRFTEMLKVTCCDASEQLKIAYKQFKNVVAFSATLKPFTYYQEL
LGFDLEKSKTLEFQSPFKPENRQLMIIPQISTKLSDRVVSSGKVAEVISR
VTRVKAGNYIALFPSFEFLAQVEKQLQVPHLRVLRQERDMKQLDVQIYLE
ELKAANEPILLLGVQGGVFSEGVDFPGDMLIGAFVIGPALPSFDFEREQI
RTYFDGRYGKENGFNYTYVYPAMAKAIQSAGRVIRSETDKGVIILMDSRF
LNPVYAEAMPQGWFKESPRELVSQKILADLETFWKNSDTPCS
>Bd2274 spb1 gene forserine protease (AJ428902) related protein
MKLLAALLFLSGSPTLAASCCGGSFSFPALILGDDRAQITGTLSQSEITD
DVLASGKWIRRKDDNRAQMIKLEGAVLFSDSLQGGFSLPMHSKNSSTSNT
SSGLGDVSLYLGHETFPELTYSVWKPRGVTFLQMTAPTSPSIYDSALNAS
DIRGRGFYSLGAGLALIKAWKVWDFNFSSEIHKSFARTASGEAYNGEATI
RPGWGTTQSLGLGWNRGDFRLGSSLAFLYEEPIVISGSTSSDGHAQKNFT
LSIAGSYMINLESAVTVSYADQSLIGNPVNSSLSNTINLSYQQRWPR
>Bd3907 hypothetical protein predicted by Glimmer/Critica
MFFAVFADVPRGTSVFMRLITLCILSLCLLACNKPDPNPELKDPIFTDYQ
SQLGATAAALESEKKGLEGFEKELAEVVPQTGQIKYAQKRVRESKEKIIR
LEQEKQYLELKIEARRKESKRSYNKAFKKGEPWPDPQEWASYQTQQRFRN
AKKSWDVKERMKEVGLGEEKTPEPAAGGH
>Bd0654 MutT/nudix family protein
MPLVLFSGYLEGVMSSLKESLYSAINVTMPLDLSTQLGRHACVALILRGN
SLENLELGYIQRAFSDSDRWSGQLAFPGGKREDSDKTDLDAALRETLEEV
GIDLTNPELLGRLNDIQARKAGTMLDFYIRPFVFFTERNFNIVLDKTEVA
DFFWVPLKEIQNPQRVTTYRLQRENIGLELPAVYLDREPPLWGLSYMMTL
NLLEVLAAANK
>Bd0414 hypothetical protein predicted by Glimmer/Critica
MKTLKLLSLSVIAATFMASPAMAQGKASAKKATLADDIDSLGGNKELAEM
AQNIKSQTRTRIVQDRIVERRNRVEFGLAYGSTFGGDSYVKTQSLSLAMD
YHITPRWSLGVRYMDFGNNLTDEGKRVFEQARKNYEAGGRAYAVDIDYPE
NAALAVVNWYPIYGKTSFLDMGVTQFDLYLLAGGGQMTLSSGTTALMTAG
AGVGAWITKNISARAEMRYQTYKDQPVTGSRTLDTVTGSLGLGWIL
>Bd1666 putative helicase/SNF2 family domain protein
MAFSGLSLQKISHLVSPKDLATLEQMPVAENAFRILKKMSLDSHNIQKKE
DGGLEIQFVYAEESSLRKSYVQVEEDGEGGELTFHCAQCAVSRKDKEDIC
VHEWASLILIWWALSVDRGFLRNHSFQVSNFCEDFWDLTETKKAHRGEGD
GKGLPDNLKLESISLVTETLSLDEDRALEEYLPEWNKVYELNRVPEGDDA
STGAVWGLPQAFRGSLQKETVYWADVRHQDQLAGLLRYNFNDGVQISSRD
ILRHAYRSVVPRDLLPGPARKETFEVYWPLLPSDPHRFFSRDLLDIEAVM
QELLSRITRRVNKGDLKFYLQDQKDLGKAFQVGNISVEAEDAFEWKVEFS
GSDEVKTSALLTAQKDQQKYIFFDNFAVDFTTGAVVAFAWKKESEALDQF
YSRQLKTDRPRAFSHLHVEGKGETAAFMKFLRGRSLPVRVQGGSHDMGAI
ASVLNLHHQDDAGFVPEKVFTLNEKETVSKMGFSTPVVLIMRTLQEGLGF
LLQTEVKTLASSSFKKREWDLKILKHLGVLQYLTLEALTYHFEGQLTDGT
TCDPANIFPALRSRVHSLLVTGDGTSLTKTLDLDELCSKGVLGIFADYVA
KVLKSVGEREAIYSSKGEYLFSGSVEREFRVLYEILKYMALSTQGSAFKR
ARTGFLTKTWDGKLEEDPMLEQGHFFMPSWGKEDVTPTQSLGLLQPLVDH
GIRLYVRGQLLQELGQNEFVVDFQIVSKLDEGMLNWFELNPRFFLQGKEI
DATQLKSMGSGGVVEYDGKFFLVPRKEIPSLRRLEGFWQKLQAGKKDSSK
KAWTDKYYQLPKHQALELLALRASGYAFRGDEEWKRICAFYDGLGTRTDL
VKLPGSVKAELKTYQHEGVQWLLDLFTLRMGALLADDMGLGKTLQALSFL
DLLRTREQLGQVLVVVPSSLVYNWESEVAKFTPELPFEIFTSKDHDRLGK
RLEAKEPLVVVTTYGLLMENDEFLSQYNWNVLIFDEAQNLKNITAKRTSS
ARMLNARFKMCLTGTPMENHFGEFYSLLDLVVPGCLGKYDDFRRHFVNTE
VVLLEDVEDLKLKTRPLIMRRTKKEILDQLPEKQETKVSIAFEDKQKQIY
RDIAIAYNQRIQDTIREAGESQSQLQMLTALLRLRQACSDPGALPEVKYE
KTPPKLEALMDSLQEIIESGESALVFTQFLQTLERTEKLLKAVGIPVFVL
HGAIPTKQRQKILKDFNETKGGAVLVMTLKTGGVGLNLTKASYVFHLEPW
WNPSVENQATDRAHRLGQRKAVQVFRYIMHESLEEKMELLKERKNRKFQS
LFSETEASTDLTGAGGALTKEDFDFLLGLK
>Bd3304 hypothetical protein predicted by Glimmer/Critica
MKFWMRIAALFTLVMSYAVGAQAQSWGTGMYGGMQACPYDYSAGAGSSSY
LDEIKEAQAEISEAQKQLRAKQSELKKIDRSLTRSRKDVEDVVSEDYTEL
MFEHIENNVSCKEYKGMGASDEFIAQGQEGDASVQAGGTREVHGFSIQEW
ARVCDPNKNGSVSGTVCSTPKFRQSEKGRATTEDCKKGLSDYKKGYSQRN
KVTREIDALKNLIDNRKEDIKIAKEDYADEQRERRREISEGGVCVDCIAS
GSGYQYQKPETNWGSVIGNVALGGLSILAGYKTNQMIADANSNIGWPTDP
WASMGYGYGLGAIGTGIGQMVGGGSGIYGSIGGGIGAGAFGCAGNNGGAY
GMMGPYGGMNGNGMWGNPYGMPGMGGLGGGIYMPGMGPWGMAGPWGMGGP
YGGMGGIIGGMAGGMMGAYPGAMMGGYPGSMMGGMGGMAGMMGAYPGGMM
GMGALASGIIGAYPGAMMGGGMMGAYPGAMMGGMGGMAGMMGAYPGAMVG
GLAGGMMGAYPGAMMGGMGGMAGMMGAYPGAMMGGMGGMAGMMGGMPGAM
VGGLAGGMMGAYPGAMMGGMGGMAGMMGAYPGGMMGMGAMAGGMAGMGGM
AGGMAGSLGMLQMQQQMMQMQMQQYQQYIQQQQSYMQQQVQRQQVVASLQ
QELYGLLYRIQQVQYGVGGVGGSIGIGIGGGTGIGPTPIGGGIGGPQPIP
VPGTGGTTGPAPIPSAR
>Bd3140 putative exonuclease
MLKVISIESRSQISEIFANYNPREQSWLVSDLRTKFELQQKILGRDGQYI
DESVLRASDLWKMLLKRLDPGLRLVSDPFARSLLRTIMDEHADVLGVNSS
AEDTVFSYIDQMAAVIFHPEGTSRLTEWFESHPEAMNRWKEWYLRARFCA
LKLLQEHRVITADWITAYLQNFNDLERVWSMPLIVDLSGEITRVEAELLQ
ALSRAVDVVVLEPTPAWRSDFHFLLQPYEDLRAMSTAVQKLPAVVRGEKK
SEVLRFSGMLAEIKHSVGQVRQWLDQGIVAENIAVIAPDIETYWPVLQAY
LAEEGIPAQKDITHKAQSLPSVTRWLALLRSKSGRLSTSDLEISFFEKEE
AQQLRYEEFRSLFKSLYVNEDLARNEIVHKVFFEQMDLGGFLKRDEFVAK
ALLSWNSDETDIVQVVLRELLQNAVAGTSLTWKEWLSYLESIVAAKEYTL
EKGEPRGIMVTKLMSAHSEKARRRIFVGLTDEALKGRNKTQLSGQDYFEL
AKDIGFYLDNPDQSDLEFELRLLAEADSDEDLYCFGATDLSGSLCSPATF
WMSLQGEHEKLTVPLETRWDELQHSTQRGERPLLAGRKELVEQRILQDLG
KVPFATITSPELPRISASAVESFLECPFIFAAQRYFKLKDLPDIDLDVDH
RTRGQLAHAIFEKLTIEPMRFDWKVEELDQLLETVRVEKKLVFADERLWT
PLKKKHIQLGLRFLDFEKRWREEFKKTRTIGREKRFEFYLDPQSGDISTE
ARDNCFRISGQIDRIDSDGGKQLVVVDYKSSSGGISAHGSWLKNHELQLL
FYMWVLEKGLVQDVQGEVIGLFYYVFRNFERKGFKVDDLAGVLYPANKRK
DKNATFEAKERYLTEFSQILMTTLGRIKNGECDAKPADFKTCTSCEWRRQ
CRAPHLN
>Bd2726 hypothetical protein predicted by Glimmer/Critica
MKSCRSMGRSVLNNRGSAFVQALVAVGVVGVMIYFLSPTVIKHRSQVTKT
ASIITARLALHSMVDYTLFGIRQRWCFSESWMQESCGASTPPKAVEILSH
PRSVERLLMKQESVDFLRAIGIANPEKVPLEDGISQEINLANFSTMHPVY
KIVADLKGYTVEFIQIQITRDVRAAIPEYGREVYLKVVVRLLNSQKKVIE
VGSSKLETTSFVGVYPREVGSFALLVAGDLRLDKESASDLGVGGAYFKQH
GSREQTIKYPGLTFESPVFVNGAIHLPKAPDLAVDIAEGDTVYTPVTFKD
KVILGYGPIKRENVEFRPRSAGNQVDQFWSNIRQFGGFQKGVEVDGERDL
GLDYLSGYATGAGNPNANLMALCKRHEDRKYNLNTTANSQLTGALLSKSG
SKYNYRLALTDGNLFNPQTKEVDKPTVRNFFSSDLLKDWGLTSRATPVSK
FKMRFGNLEVEGEVPLDGTVTLEPKIDLRPLERSIERQLSAAEAGLDDAR
RDLNQAARAVERARRDVNEAEDDLERARNRVPADPARVSQARYNLNNAQN
DLRNAEAEKNRQEQQVENSEKRVSELRGNLSEVRSNMGIQPKINITMKNP
VKAGDNPENTNASFKDLEIKFENGHVLVNSNGDRIPVSFEFEAFDVAYYK
GYSMRPWSNNNRGALVFNPDGGGFDVSQTLLDSRGQSKGGLPEGEDPYVN
LDLACKTLGTNTSAFAGTDWSKSFAPNSKHSWSFTNKYEDRKDLILDGGN
AYAPPGGMGTAVFHVVSMAKTCIIESSANLVSGFLNCEKLVIRSRSSKLR
IIGSIIVSQGIEIDEQAYKHGIVWSTIYHPMATFELRQSGILKGLNAQDC
TTINRYPVWHPYPSMRDVSNLYKCNSLSLRAKADPFRWTAVDPDCGLINN
SNSTMCKNRLMRFYVLEVSRESGI
>Bd0652 hypothetical protein predicted by Glimmer/Critica
MTFLFPLGQVQPAETLGDLMTKGLLFAAVLGLSLAANAQTSSTTLSTPSV
ESGTQKTTTSVGDVLKNKKFEDDKDITDSKLKAESGSLSRYSLKFSLSYF
GPPIGDLDSKLQPNPDGSIGVNQVSLSGSISGRYRLDSKAAISAGTGINV
LTPFQGAERTDVKTPFISYDRNARLGDVQVRNSYGASLTTVPNFREVGQY
SSLSYDNSLVYNIGSSGVAVGLDTGLSVFLYERGYEPKDGKASRYHLGFY
PQVKYNFSDKLNVYTSVAMNFWNPRYRDGEMDLLNKTLSGRVGMGYAFSR
DIYFAPYLNYYPKDARTESTTLSFSTIFSIL
>Bd1934 putative endonuclease
MKNLSVLFIVLLLPSLLWAQGTRIKVLSVHDGDTLTAVDVSSNTRVKVRL
MGVDTPEVDFMKETQGDVALAARDFLRSLIPADGIITLSEDSQIDKHGRI
LGRLLNGKTELNIEMLKNGWGMIYFIYPFEKRVVSDYSKASKEAYDNRLG
IFSNDYRDTQEPYQFRMRVQKQVGRNPVGDLELKKVVPPEEINKIPVWKR
VFFPNYEMAYQNGYN
>Bd3793 putative 3-methyladenine DNA glycosylase
MILPQEFYFEDTTLVAQSLLGKVLNIRTDSGIQKARIIETEAYLGIEDPA
CHTFEDRRTERTKSMYLDGGHSYVYMIYGMYFCLNFVTRTHQHPEAVLIR
AVEPLPAQENLRKKDLKTNGPGKLCKYYGITRKHDGLKLWKKSSDLYVTD
EDFKVSKKQIIPTARVGVDYAGEAAKWPLRFYLRDHLFVSKK
>Bd2115 hypothetical protein predicted by Glimmer/Critica
MIKYYQLKCCHLLGQRVKTPFAEVDLLFKTPRQTLLMVEVKTTNLSDFQP
FRITKKQKARLVRAMLFLAARWDVLVEIHWAFVTKDGEITVFEDISD
>Bd1013 hypothetical protein predicted by Glimmer/Critica
MLLGPSPALQLWLSIKELHMAKHFSFGGDLKHDFNGTSYGGELSKGKRRS
QRPLSNFEPIHLVLKSNKAFGRRSLLHPANRKMLLKYTRRFVFRFKVRLY
SFANVGNHIHILIHVPDRKAYVSFISALTGTISKMIFKSAGMWDLRPFTR
VTSMGRGFGIVRKYIERNVEQGLMVVESIMKKDPLWRRAGFDSVIWSWG
>Bd0668 conserved hypothetical protein
MTTPFHTHYLVSMDSRRFFLILVFLVVCQGHSTEAAGGIKFGFNSSNAPP
LLFQFENQNTPIPTGGLIYEVSVAIGEELGGDYSIVRIPRKRIATNIINN
KIDLICHNSVRWRHPFADGALWSKPLFTHTNVLVGLTTVPFVSPDQIKGT
IGTVENYVYADLEDRFKSKELQRSDSPTIEVSIKKLLTGRVPYILLSDIE
YTYFKSLYPSLQRSTFALDKTDIQCSLSKKSRLTLSRLNRAIDRLHEKQV
FSKIVKRYSDPETTPKPVSYGLNSNDSPPFIHFDKTSEVDGTVRGGVFFD
IALEIGKRIQRPINFVLLPRGRLDARLASGQIELVCYDTEAWAGQYAQQY
HWSTPIFRQSDFIVGHQADPKVAKIRTLEDLKGKRIGAVLNFVYPALTPY
FEDKSLEREDAGSGAANVEKLSVKRVPLILLNSLEYSYYKSKDSRLQKAP
LEIDPVDVKCAVSKKSTLKIEEINLAIQDLVKTGRMQKIFAPSYRH
>Bd3524 Exodeoxyribonuclease III
MRSGLINHWHRSVSLLLIDAFDGVETQGETVKIISWNVNGIRACHKKGLL
DFVNREKPDIFCIQETKAHIDQVENELKKLTWNHSYWSSAVKKGYSGVAT
FVNEEPKSVEYGWGISEYESEGRIIISDHGPFDLYNIYFPNGGSGDVRHN
FKQQFLKDLNHHLKEKLATGRQVVVVGDYNVAHEAIDVHDPVRLSKVSGF
FPEERAWFDSFVDLGFIDTFRYFKPSEAKRYSWWDYRQMARISNRGWRID
YICVSKGLEKYLASADILDQVEGSDHCPVVATLDI
>Bd1343 conserved hypothetical protein
MVYIFHPPESEIDRRYNYHWDLLKAALEATKDKYGPYVLKPSVRMTEDRQ
MRELLSNSKKLTVMIRETSIKRERQLETVRIPIDKSLISYRVLLINKKDK
ATFDKISNLEQLKKIPMRQGEGWGDNAILESAGFRVLEEVYYDRIFENLV
FSAHTTAFPRGVTEVLEEFNARKERLPQLMIEENILLYYPLPTYFWFHQT
EEGKKLARRAQDGLELLIQNGEFDRMFNRAYGKVIADLNLKKRKLFRIEN
PLLPTSVPFDNKKLWFDPTK
>Bd0591 Endo III-related endonuclease
MASKQSPAKKPSAKQAGILATIELLKRYYPDAYCALNYTNPFELLVATIL
SAQCTDERVNMVTPALFKKYPTPKAMAKAPVESLEELIRSTGFYKNKAKN
LKACATTLVEKHHGEVPQSLEALVELGGVGRKTANVVLGNAFNIPSGIVV
DTHVTRLANRLGWVKTDNAVMIERQLSKLVPVEDWIMLPHWLISHGRAVC
KARKPACSHCFLEETCPKKGV
>Bd3498 conserved hypothetical protein
MRHIAAAFVVLSLASQSFATSAEEVKTKTAEAATAAADYTKEQKEQFQKD
MEENLAKMKKEIAEMKEAASKKTGEAKTEYNDQIKALEKKQEEMKKDLAK
MKKSSGKAWGEMKNGMSKAWDAISDSYGKAKAHLSEEK
>Bd0004 DNA gyrase subunit B
MSAEEQKSYSADSIQVLEGLEAVRKRPGMYIGDTAFKGYHHLVYEIVDNS
VDEHLAGYCKKISVSINADESITVEDDGRGIPVATQKQTGKSALELVMTV
LHAGGKFDGGGYKVSGGLHGVGASVVNALSDRVSVEVQREGHFWRQNYER
GKILAPVAQGETTTKTGTKVTFKPDRTIFKDETLSYDFTTLANRFRELAF
LNAGLHISLTDERNGKKQDFQYSEGVAEFVKYMNQSKKSLHNEVVYFKGE
KDNVEVEIAMQWNDSYSESVFTYCNNINTHEGGTHLVGFRAALTRTTNAY
ATEKNLLKDLKANLEGEDIREGLAAVISVKVREPQFEGQTKTKLGNAEVK
GIVETLVNEKLADWMDRNPSVAKNIIMKCVESARAREAARKARDLTRRKT
VLDGGSLPGKMADCQERDPALCELYLVEGDSAGGSAKQGRDRRTQAILPL
KGKILNVEKARFDKIISSEEIKVIISALGTGIGKDNVNVDKIRYHKIIIM
TDADVDGSHIMTLLLTFFYRQMPLVLERGYVYIAQPPLYRAKKGKEETYL
KNEAALTEYLLSSGLGNFKIKGKESLPEKDLRQLILNIQRFNDLLRVSSK
KYDKDVLYFLLSKVTDFEKTFTDAKKIEQVLTDLGAWVNSDQTLGITEYK
GEVKTEAETGKMYADIYTVRYADRMTTKFSTDNLRSSEIIELRKIWADIQ
AISTLPLTILEGDNEVQFENYNDFYTHVMESTKKGIYIQRYKGLGEMNPE
QLWETTLNKENRTLLKVTIDDAVAADETFSILMGEMVEPRRQFIHDNALL
ARSLDV
>Bd0869 ATPase, AAA family
MDSRVGMVYDPPMDLFSASQASHGTSPLSEILRPKTLDDIFGQQKTLGPQ
SKLGQMLRKGYLPSLIIWGPPGTGKTTFALALSQHFNAHYVHLNAVDSGA
KALREVGEAGKDRRLQYQQKTILFVDEIHRFNKAQQDVLLPFVEKGDLVL
VGATTENPSYELNRALLSRCRVVIFERLSEDDLNKIVKRAETHYAKPLDK
ILTEDAHKNLLEYSDGDARRLINSLEILYTFTKDEVEGPLLDVNDMRELL
QQNPLGYDKNSEMHYDTISAFIKSIRGSDPDAAMYYLARMLDGGEDPVFI
ARRLIILASEDIGNADPRAISVAIAGLQAVEAIGLPEGAITLSQVTTYLA
SCPKSNASYMALHKARELVEKTRTLPVPLHLRSAKTALAKDLGYGRDYKY
PHNYPTGWVEQSYLPEEVEKTAIYEPTTRGFEKNIRDYLSWMKLKKDKE
>Bd0946 putative N6-adenine-specific DNA methylase
MPQFFASTARGLVEPLELELKELGLKVTDRYIGGVFFESNWEGCYKANLH
SRLASRILKPVLDFTAYQPEELYSQILRHDFTKYIKPTQTISIDASVNES
KMRDQRFVAMKVKDAIVDQFREKFGVRPDVDNTNPDLRIHVRAIKNQFNV
AIDTSGDSLFKRGYRKEVGEAPLKENLAAGLLRLSEWDRQSPLVDFMCGS
GTFLIEAAMMSMNIAPGINRKGFGFQNWLNYEEETWEKVIQEAMDAEKEE
LDFKFYGFDIDKRVLMNAKDNAKRAGVDEVIEFKKESVATVEPPVEKGLI
IVNPPYGARIGDEDNLRDVYRDLSFTMKHRFKGWDAWILSGNKELIADLK
LKSTRKHFVFNGNIECRFLKYSMF
>Bd0467 hypothetical protein predicted by Glimmer/Critica
MKPIIPFAKMSNKNTIATFFVDDPGNGGRTWFMRRSSRRATARIDNPRLQ
LTKQFGGALLKSSHAKTARPLSLKKAMHVVLSSESAQGEWAFEKSKNKRI
IETVLKSQARKYGISLREIVCSGESLHVLIRLRKRRSFAPFIRAVSGMLA
LMITGAGKTRKLKKKFWDQRPWTRVLEEVRGYSVIADREILEHLKKIGLQ
SQPYPLRI
>Bd1631 conserved hypothetical protein
MKKKSGISQALSAVSQLQKDVQSHADASRAVVLQRFFKTGKGEYAEGDVF
LGLTVPQSRKIAKKYASALSLKELDSLVKSANHEERLIALLILVSQFQEA
TEKEQARIFKLYIKNSKYVNNWDLVDTSAPAIVGGYLLSRDRSVLQKLAT
SKNLWQRRIAMLATFHFIYNGESADTLKIAKLLLKDEHDLIHKAVGWMLR
EMGKRVSEEKLLKFLDQYAAKMPRTMLRYSLEKLPAETRRHYMNK
>Bd2271 
MFTKIKAFRNRFIQYKRSSKVHSDLDVLLGSAAEQKQLEDQLQWLVRLLQ
WVRYEGAVDAHIEKETGRLPVARLRYLLMVLERNPLWKKSVAVILRTVVH
EVSGLELYTETGLPRELGLWSELSDRLMMKMLPTPPLDHELGYLFWALFP
EKEDPLWVASIDPATFERLVELFNYEVGTDEKDWNRFGMDLEDALVYLVI
QVRAIGLSPAIRYRLDKPNFRDSAFFALVRGLEEFMNAYHAGDRNLALEK
ASRFRMIIWECRREMAQVHKHLDEYGVSVNLVFQMARLRTYLQRVDSLLE
ILLNERVDSKKVTSFLSKLIEENQDLRSISSLLSQNVSLLARKVVERAAE
TGEHYITRTKDEYRRMLQAAGGGGALTAITVYVKTGILALGLSSFMEGVF
ASMNYALSFVAIHLAGFTLGTKQPAMTAPALAAKMQDVDSEKGMNDLVTD
ITHLIRSQVAAIAGNVMFVVPCVILIDALFFVLFGGHLMSHEKAVYAFKS
VDIFGPALLFAAFTGVLLWFSSLFAGWADNWFALNSLRKTLARSPTLKAV
FGKRGARSVAVFFENNISGLVGNISLGILLGMTPEIMKFIGLHLDVRHVT
LSSGTLGGALPVLGVDFMKTWDFWRAVIGIFFIGALNVLVSFGMALWVAI
KARGINPPQRKAIRQAVMKRFFSSPLSFFLPVGSTVPKSSNGNHGH
>Bd0697 putative actin-binding protein
MRVYVGNVNKGDLVATAAFQKILENLSGNKNVQNLLESFQKLSDEIKKKE
SELKGRFDQEKEDKIELAWKKYQEIVKVLSTSEAKLEKEVNSTISKIKKS
ADDLEKNIQAYKKKAIVQKTKLEKSLFKKQTTKKASSKKAAAKPAATTKK
KATVKKAAVKKTTKKVSKKK
>Bd1464 DNA polymerase III, delta subunit
MALIDAQKFYRDLEKGQTAPMYFLFGEEPYLLNQSVERFKYAVLTEGAVD
FNYSLFYASDADVVSVRDAVETLPMMAQRRLVILKEAQELTDKEWAELEP
LLESPVDSTVFVILASRVDKRKKQIRLLLDKADCVEFKKPYENQIPSWIN
YIAQSLGLTISNDAILLLHKLVGHHLTEIEGELKKLGEFVGERRIEVADV
AQAVSRSKEENVFDFTKAIGENDRVKALELLVHLLDQGQNEIGIVSLVAR
HVRILLTLKRGMEEGLHGAKLAHFAQVPPYFLESYLDQARLWTAKKLEQT
LVVLSETDKALKSSPLSSHIWLENLVLKTCGTQYAM
>Bd3551 conserved hypothetical protein
MPGKVFVNRTLNLKKIRYIGVDMDHTLVRYNSENFERLSHTTMIDKLVKR
GYPETLRKLVFDYNFAIRGLVIDRKMGNLLKLNRYTAIRASYHGLKPLDF
KSHQKLYKSTYIDLSNSDYLAVDTSFSISLANLIAQIVELKDSDTANKYP
EYAQIADDVLDALDEAHRDGSLKDVVKQNLDHFIIKDPTLVHTLEKFRRH
GKKIFVLTNSDFHYTKLLLDYAIQPFLKEHKSWEDLFEFVITFASKPKFF
YENQKYLRVNPADGTMTNMEGKLTPGIYQGGNAKKFTADLDLAGDDILYV
GDHIYGDILRLKKDCNWRTAMVIEELDVEVENNKQAEPINQEIETLMKKK
EPLEDELTDIMTRKIEKSVAANEPQIETLQKTISEIDSQISQLIKKQQAM
YNSNWGQLMRAGNEESYFAYQLDRYACVYMQKLSDLLDLSPRTYFRAPRR
PLAHEIF
>Bd0252 conserved hypothetical protein
MNQLQWKMNSPLGDLYMVASEMGLQSLYWGKTAGIPLAPSLTGKDGALKI
LKQTEAELTEYFKGQRQDFDVPLDVAGTEFQESVWRQLKKIPYGKTVSYT
DIARRIKNEKAVRAVGTANGKNPICIIIPCHRVIAAGGGLGGYSGGLDRK
RKLLNLEQSGGTPNTPAAKV
>Bd0385 hypothetical protein predicted by Glimmer/Critica
MVLSPRVQYRFPHYIFVDIGSTQHLMGGEIGCLEKALQIAAKFAPDASAA
IADTPAGAQMLAKWRPSHISLRGKEQESFKGLGLDALKDLEGLSPWAQKK
PVEHMIAFFHTLGVYGLEGVLNFRLNSLRERWGDFGVLLWNRLHSQDSQV
ISPLVPRDPLVGYGYLDDPLGSAPLLMNRLKVHLDILFARLQGLARHAQR
LDVVLHCEYSDKRYNLSIEPVSPTRDQELFEDLLFKKLEQQVLENPIREF
EITLFDVPEKIQQLDFFEPRDNTEDRWRRLISFAKQSQCEMGFLQMEASH
FPEQSFRLVTDWPEDFKPQDLVERQDEALQIKSVYAKALASSPRPSLLLE
KPQALSAGEVQKLRFVSSLPSERIESAWWQISVQDLKNRDYYFALSHQGQ
LLWVFKDRINSQVYLHGYFD
>Bd3893 transcription-repair coupling factor
MKAESTHTRLESILERAFETTRGKIQVTGAASPLALAYFLSQTYSKKING
LPHLVVVGSHREAVTLQALLEFFDPSRQSHILPAFDVSPYSGLYPNTQVV
ADRVRFLAKAQSAKAGEIFISSVDALMQKTLPVKILKDHSKTVRAGDELP
ENLSDYFSSLGYTAAPMVEDKGQFAVRGGIVDIYPPTENQPVRMDLFGDQ
VESLRHFSVADQRSSDEIQSFVLTPAREVLYRDETHERLLQRVRASLEGR
KVDKAEAEETLRSLVLKNAFPGIEFLLPYFYGELATPADHFPGALNLWFL
DPVEISRCADEMWAELKADHRTSDAHVIRPELEDIYVNFEALAYPLNSRQ
VYFSSLEYFDEENSDDSRVEYRTAMTQDFTNLALANAVGTEQWLQAATNK
LHRWRDEGYRIFVSTKNQSHIDRLSLVFEKLELKAVRTSSDEYRWDSWLQ
EQDREQNIVHIVPRYLAESLRLEEEKIIFLRDEDFYGKKQRAKESSGAQD
FQKQAKRLSFGDLKPGDLVVHTKHGIGQYEGLKIMNISGVESEYIQVGYK
DKDKLYLPVYRVGQLQKFSGAGTSILDKLGGTAWEKTKAKVKSHVRDIAA
DLLTLYAKRAEMHRPAFVIKEDEVLMFENGFPYEETDDQLRAINDIRKDL
KSTKPMDRLVCGDVGFGKTEVAMRAAFFAIQARKQVAVLAPTTVLTFQHF
ETFKKRFEGWPVDIRVLNRFVTPAEVKKTLQDLKDGKVDLIVGTHKLLGS
SIAYKDLGLLIIDEEQKFGVTHKEKIKKIKTSVDTLTLSATPIPRTLNMA
LVGIRDLSLINTAPVDRLPTRTFVTKFDPETIRKAITAEISRGGQVYFIH
NRIESIYGLVDEIRQIVPEARIRVAHGQMEEHELEKAMLAFFHHEIDVLV
CTAIVESGMDVPRANTMFIDTAHLFGLSQLYQLRGRVGRSKTRAYCYLMM
PRNHKLDKEQQERLKIIQENTALGSGIKIAQYDLELRGSGNILGEEQSGH
VNSVGYEMYMDLLNEALAEAKGESVEDMDLDPELNLKIPALIPDAYIKDI
RIRLGYYKALADITSNEDLDRIEEELRDQFGPIPEQTVNLMGLMLIRRQC
KELGVRDISAGLKSISLIFTEKTKLSPEKVIQLAIRESKKYSLTPDNRLN
IKMSTITWSAVHEEIDALLRLI
>Bd1431 putative nuclease
MLKPALILLLPLMITACSERLQAREVATIKASCEHDEKTFRCVEVLKNYD
GDTLTVNIPNVPALIGKKISVRVSGIDTPEVKTKNKCEKEAGRIARNLVA
STLKSAKNVELHNVQRDKYFRILADVMVDGRSLADILLKNNLAYAYDGGT
KSHPDWCKSLRQPASR
>Bd2360 conserved hypothetical protein
MKNLLQLKNLTLALLLSLLVGCAVTFKKAEFSLPPKAADEVSVMSFNVEN
LFDTTHDENRNDYTYMPLAVKQKDPKIVQACKDTNDSSYRVSECLSTDWS
EEQLDKKLQNLSKVVLGVDGNGPDVLMLIEVENENVLNIWNKKYLQKAGY
STVVLIEGPDKRGIDLGLMSRLPVVGKPVLHPIPWKPKNDEDKKWMEASR
GVLEVTLKAPNGDPITFLTAHFPSQANPTYWRQQAAEFVAKLIKDKGPDT
MVIAGGDLNITHEEESKENIFRDTFSPVGDVSHFVGCKECPGTHNYRKSW
SFLDAHIYSKALLEKGSGSYKMEPGTIDVIRYDEVHLKKGKYPLRWDYDR
QIGVADHFPLYVRLKQRGPAKAPVKDEAPAKAVKPAKDAKKTKKK
>Bd0172 hypothetical protein predicted by Glimmer/Critica
MKKAFVFGMAALVTTMSLSLTVHAAPGAKPAREALVEYTKQVKAAAFGKG
MTSKGLDAQKLKVAQDNIINELALPSGKNNALSMALKADPTKSAQRLDSL
ATIVAAKKMAAEISKKDANEGQSIDAAATASAKLMANSSLTGARKTAKDL
NAAELTETTAALSKLETLPEAILTRFSKAERDSYTQIIERHDQIVESGKR
GTSEEAFVDAIMEVKGVDKAKAMEVVKKLKECV
>Bd2678 hypothetical protein predicted by Glimmer/Critica
MAIRVYQRDGQVCFKIQFTSRSRIARANVRLQRDLGAVTNVEAKREYEKL
KKEAEAQRLEKERNGLVWRDILSRWSKDVLMNGPYEQSLSKRDIYNALQM
QTKTWMQFPVEQLRPMSMRLIFNEMEKKGLSKGRMKSVRSAVNTLFDWTQ
LERIIPAHVESPGRGVAIPKVETKMQPILNRDEIKLFLGKAREIGHEYYY
LWAVAVSTGCRSGELWALRWTDISFSSRLGCDKSTKTKHSRQIPINAALE
MLLKELKLKTASTGYVLPRITSWRRGDASKVSRSFCQALGLPEITFHATR
ACFAVQCLVGGLDIVTTMKLGGWENTKSFQHYFRLAGVDIQGPTDVLDLL
PCEIEFKVIAIKKLETI
>Bd3546 RRM3/PIF1 helicase homolog
MNSESKCYRFYICFARLGSGMIAGLMPVHEIELSPEQASALDLLRSGENV
FLTGGAGSGKSFLIRQFMRELDPKEMPILASTGAAAVLLGGRTFHSFFGL
GIMEGGADATYERASKDKRLMSRLRKVEGVIIDEISMIPGQALMIAEALS
QRARESKLPWGGMRVIAVGDFAQLPPVTHTGQRDWCFLNGVWEVSGFQTV
MLSHNQRVSDNLFLDVLSDVRHGKVTERVREFLNEHVQDHDEDDPGTRLF
PRKINAEKFNERKLAEIDETEVVIESIYSGSERHIETLKKASPIAEKLIL
KIGCQVMFLQNDPQRRWVNGTRGTVVDITADQITVRKDRGREVQVSKSSF
AIQDAEGNIMAQVEQFPLTLAYATTIHKSQGATLDDLWCDLSQLWEPGQA
YVALSRLRSAKGLHLIGWNPRSIIVDPKVLHFYKQFEGL
>Bd0682 putative yir2 protein
MICTKFCEKILITCVTLFALNAFALDAGAEKLKLPQLPQIKAPEAVRIEV
KPVARPEGSLILDNALGKNLKDFQTFLKTQGPRTGGGGNSCALSIHQNTE
KLVSLLSEMPTLLSEGQRAFLLHKISVAKFYLSEDLTLDGQTKDAINYPN
TNEIYLSNKLCGLDLLDVQSRAMAILLHEYLGLANIDDRRYQISGAFLQN
YSTFNARGYTFTADNSYKAHTGQCVQSVLQMQQIGNNLIISTSSKPGARI
IPLTRQHVEEFQALGERIWGAEKTVTVADREMGVDYVFSSESCGTVSCEY
LRIKKGDVTIKTIKNATNGLSTIDCKR
>Bd0820 hypothetical protein predicted by Glimmer/Critica
MFWSWILLGGLSSFAVTPEQVLKTAWSDTAYTSQEEMRTTDSRNPLRNVE
GFVSAEKEDDKNEYEVGLKFQFRSWPEWKLGPDSEPRKKVLKEASLAWAL
HERYLNLISYEISQKKLAVLNSSMKLSEGYLKAQSLSLRAGRTSTKSFLG
AQGDIYKLKRLESVIAQENKLAARKIKSWVPQWGESPLEGFDLLSVQEVV
DALGSQPTPDVSLTARISETEFKDISRELEILRGREDQWVKGLDVSQTHK
DDGIGYKVELTLQLPHLGSDDLSRQKQNELILKKALKQKEAEDSKDHLLS
LKNQIQNLVGLYKMTSQGLKESQKMKNQDTLSVLEGRLLQEQTELDLLSQ
QQEILTLYVEYLLESERLAAEPAKNHLSKTLKVVSL
>Bd0622 
MRIIAGKYRGHQLVAFDADHIRPTTDRVKETLFNKLQFDIDGARVVDLFC
GTGNLGIEALSRGAEFCTFVEKNPKSLVITRKNFEKLRVPASDYKIVNMD
VIAYLKSYEGEPFNIIFADPPFTEKMAHFVMEAASTSAAFGKTTLLAIES
QAKERMEDRYGSVVRYSKKEYGDKILSLFCHESALEQDEEPAAEEEHHE
>Bd0605 putative transposase
MNDYLCMGRNRFICHTELPYHITARCINRDWFSVEPENVWRVMTTHLHFI
HLAFEIRIHAFVLMSNHFHLIASAPNGNLSEAMRFFMSESGRDLRTFSNR
INVTYGSRFHRSLLSNQLYYQHAYKYLYRNPVMAGLCERVEDYRYSTLRS
LLGLEKMEVPICDDTHWETWGSRFATLEWLNTDTGHEDWEKIQKGLRRSV
FKISPYKSRPSHLEVDAL
>Bd3199 hypothetical protein predicted by Glimmer/Critica
MSINIARRAPVSRRLLFALSTSALILSGCASGSFKARQEQREKMAASTGM
FCEFLSGDVYHDLDVELSMKMANRCDANRNFSITNYKNTSDQNGVIYCCA
TSGRAEKKAAVKKAPVTTPSKQEAEQSDAEVISE
>Bd3507 putative secreted nuclease
MKLTALSLLMLVSTLCCTLVQAAPSSGDVPYYGEKFHHDLASGISNDDLK
KNIQFVLRSFHLRVNGSYDQIVNGCSGDNCYQHVSLGYDGARTFLLGSFY
LVDEGHGDYAVKDVYCDSIRGSDDFRGGNAPAPGRIPDGNIVNTEHTWPQ
SRFSGRHNKNMQKADMHHLYPTDNEMNSIRGNNPFGEVVQDRKILKCKVS
RFGRASQGGADVFMPPANHRGNVARALFYFSVRYDLPIDSRQEATLRKWA
KEDPLDDEEISRNDAIHKMQGNRNPFIDFPGLEDSISDF
>Bd0253 DNA methylation and regulatory protein Ada
MKKDDVFYNAMLARDPRFDGKFFVGVKTTGIYCRPICPAKPKRENVEFFS
NHLAAEKAGYRPCLRCRPESAPQSPAWIGKSALVRRAIRMIDKIETLEFN
DNDFADLFGVSARHLRRLFIEEVGKTPKQLSFENRLNLSRQLITETALPV
TEVAFAAGFNSIRRFNDAFKERFKKSPSEIRRKPVKDKSTLTIRLSYRPP
FDFTGLLHFYRSHAVGQLEWFEEGLMHRIIEVNGKVGQITLSDLPDESCI
KLEIDFPDTTALHTIISRVRSLLDLDSDPVIIANVLETDKDMKALLKKHP
GIRLPSSWDPFEVVVAAILGQVVSVERGRALVNDLIDLAGSDSGLLRDGK
SVRLFPTPAQVIKADLKSLKTTTRRKETLVALSKALINGDLSLEPAQDVD
SFVEKILGIPGIGPWTASYMALKALRHTDAFPATDLIIARAIAEHPKTKF
ESFSPWRGYVAALLWREYSQVLKKTGRKK
>Bd1809 conserved hypothetical protein
MKYFNKLGTTGKVILGVVLLLVVARAFLPAGMKYGINWYLGNKMENYEGR
IDDFDLTLYRGAYQIEGLKIWKKGANPEQPLISAEQLDLSIAWRALLKKE
FLGDLSVQRAKIVLSDSKDEKKEDLGQGQDWRAVFKKLIPLRLESVKVAD
SSFNFVNRDFKVPVDVRLDRIEGRVDNIRNTDENKDPLPTRASVVARMQG
HADVKGQARLNLLSKVPTFDTDAQLQNLKLETLNEFFIAYGPFTFNRGQF
SLYMESVSRDGRIKGYAKPFIKDLDVIDDKESFKSMGQAFNEVGLALVNL
ILRDGDSKSLGARIEFEGASKAPSIDKWGAFWSSVQNGFFESIHQSLEHS
ISPKDLKKEKSP
>Bd3382 putative DNA-binding protein HU-beta
MNKAQLIEKIATETKVSKAQAEAILDCAVENIKKSVKKGDDVKLVGFGTF
TKAKRKARTGRNPQTGKAIKIPAAWAPKFRAGAEFKAMVK
>Bd1342 putative DNA alkylation repair enzyme
MPQKKTAENESAFKNWINEALVRRMAEHLQYHHADFDSKSFLKLSRELSA
LEMKPRVQLIRGRLQSHLPQDYTKALNILLKAVNKPKPGVEPLSGFDLWA
FTEFVQTYGLENFDESMKGLHTLTQKFTAEWAVRPFLIHRQEETLKQLMA
WTQDKSHHVRRWVSEGSRPRLPWGELLREFIKDPAPTLKLLEELKYDEEL
YVRKSVANHLNDITKTHPDVVIKTLKRWQKEAPQEHKTKIDWITRHALRT
QVKAGNAEALKLLGYHTDATVKLHDLTLKPKTVKTGGHLEMSFGLSSPKN
ATVVVDYAIHYKKANGTNSAKVFKLANKELKAKERLDFTKKHSFRPVTTR
VLYPGSHVVEIFANGKSLGKATFLLKD
>Bd1244 
MKWRTRMKLSKLIKSVIVLTLLSFVGVANAANQSQAVPYYGEEFYRDLRA
GVSGEALQNRIKSVLQNYHIAVKGSYDLVVKNCIQGQGHCYRHTAIGYKA
ARVFLMGKYYLVKDGNQYAVRDVYCNSDRGPEDFRSSPPSPGSIPNNTVI
NVEHTWPQSHFTRRFPDDVQKSDLHHLFPTDSQLNAIRGNHPFGEVTKDV
MELKCPDSRFGIGSAGSDEVFEPPQNHKGNVARALFYFSMRYDLPIDPQE
ENVLRKWNHEDPVDQDEMKRNVEIFKTQGNRNPFVDHPELADRLFDF
>Bd1953 conserved hypothetical protein
MRRNPDTLSLQNLPILPSDLTSFLQNNLAMPRKIVPASADHPYHIVARAR
NREWFPIARSEVWSIMEDYLFFISHAYGIEILSFVLMDNHFHMIVRDPQQ
NLGEAMNYFMKETSRHMSTKAGIINQIYGSRYHKTLISNPLHYLHAYKYV
YRNPVEAGLCSKVQDYPHSTLSISLGMHRLNFPIYPDNTLFESPDSILSW
LNAAPDPRDKEIVQKALRKSEFKIPTIRKNQRPHRLTSLPY
>Bd1370 RNA helicase
MVFSLLTPKCAKFELSQTVTDSRRADRGLSAILVSFQSEIGYSQPSLYPG
ARMNTFADFELLPSLLKTLKTLKISKPTDIQKQAIPLIMSHQAVVGVSET
GSGKTLAYVLPILNYLKSLEESGDPVKEENAPRAVVMVPSRELGEQVAKV
FKSMTHDTRLRVRPALGGMSLEQARRNTSGAFEVLLATPGRLVQMLNKDL
ISLRDVRFLIFDEADQMLDQGFLPDTNRIVDCCPEDVNLALFSATVSKTV
EKLMNDLFAKAEVIRSKNSGKVVSTLKTKNLTVEDGKRWPLFEKVLAQKV
DGGTIVFANTREQCDKIAKELTDKGHACVVYRGEMDKNERRTNLKKFRDG
QVGLLVATDLAGRGLDVSNIARVINYHLPKEMENYLHRAGRTARAGRPGL
VVNLVTERDSRLIAALEGNKPPSLEKKTQHQGKPRVASKTRFTDAKGKAG
YAKSMGVKKR
>Bd2306 hypothetical protein predicted by Glimmer/Critica
MKDYIQYLQDVLGLQNVMLAPEQAGAEAAKTQFFTAKGPFTVSELRHYEL
VFLNILTQSKESLFLPEVNDLYSKMKAAMKLRNLQVLELDCTVEDRSQLP
SELAKICESKVVVVYSSFPKDIGELIFKGPGKWLETYSPAYLLEDPAAKK
VVWNDLQKVMKELGV
>Bd1394 dbpA, ATP-dependent RNA helicase
MPQKSLSGYLNLGSVIFSYFHSGLDFKSPPCYLSVFHFFRGVPVSQNEFS
TLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAA
FSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAM
TGGQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEAD
KMLDMGFADEIKTVMRDLPGSRQTVLFSATFPESIEHLSRKYQRHAQQVI
IEDEEQNLIEQLVYDSEDNDKTNVLMRILQQHPSDSTIIFCNTKNAVAEI
AERLNDLGAASGCLHGDMEQRERDRVMAMFRNGSHRILVATDVAARGLDI
DNLELVINFDLPLSPEIYVHRIGRTGRAGKTGVAVTIAHPKDTLKLGQFE
ELTGGKFARPSLGFKNQYGLNKTLKEAPMKTISISGGRKDKLRPGDILGA
LTGAAGGLTSADVGKIEIQDKISFVAVSAKVADGAMQKLRDGRIKGQKFQ
VKFVK
>Bd1412 deaD, ATP-dependent RNA helicase
MAHLFEVGLDLPQAVRYQCTYGVFYLRPLPIPERSLMTPLTTVDNFESFG
LSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFG
IPLIENIDSTVKDTQALVLSPTRELALQVAEQLTLLGKKKGVRVVTIYGG
ASYRTQIDGIKRGAHIVVATPGRLVDFLEQKMIKLQSVKTVVLDEADEML
SMGFKEALETILSATQPDDSDSVRAACRTWLFSATMSSEVRRLTSTYLEN
PETVSVNKVGGTADTIEQVYYTVKNSYKTEVIGRLLQTLPEFYGIIFCQT
KMEVAELADVLTQRGFPADSLHGDKSQQEREATLKKFKQRQVKVIVATDV
AARGLDIKDLTHVVNHSLPWDSESYVHRIGRTGRNGQKGTAITLVNPEQL
TLLRRVMQNTKAVLTKGVIPSADEVAGLKIKDVMDKVTSMDPEAVQLQLA
SDLIQDLIQAEDINFKELSKEELLARFIAAYFPNVFVKKDLMLDYMGDRV
PRELLPRDPNDNRFTRGGRGNDRRDDRDDYRARRPFGGGRGASAPARGFR
SEGARAEFSGGEQRAERTERPAFRDRPERTERPERAERPERSERAERAER
SERSYRASASSDRPARAERSERSERPQRAETDRPERRGDHPGIKRFRGPK
RQFREQ
>Bd0349 dinP, DNA polymerase IV
MRKIIHIDMDCFYAAVEVKYRPELKGKPLGIGGPPNTRSVLCTASYEARK
FGVRSAMPSSQAVRLCPQLVLIPPHFDLYKAESRKVREIMERFTNKIEPL
SLDEAYLDVTDCEQFGGSATLIAQEIRRLIFTELNLTASAGVAPNKFLAK
IASDWKKPNGQFVVRPQDVETFVKDLPVEKIFGVGKVTAQKMHDLGLRTC
GDIQKYTVLELSHWFGSRAAELYDFSRGIDHREVITEWERKSLTVEETYN
KDLPTLQDCLKTLPSLYEDFVRRMDRGQYHDRIKGLVIKLKFFDFKQTTH
EEVISELPTLQDFERLLEKAWNRRGVPVRLVGLGVRLGTQKKFSSESDSS
QLKFAI
>Bd0001 dnaA, chromosomal replication initiator protein dnaA
MELNSSFWTLIKTKMKSRNDNNKLLDTWLDPIEYVSTTGSADRPRLVLGV
PNALHQYFVIENLQDKIYTEISDTYGKPFEVEFSITGNKINSHIETSTTP
DEVLSGSEILQAQLARAQNIQPTQPRSSSDTLNSELTFSTFVVGKNSEFA
HAACYNVARNPGADDYNPLYIYGPVGMGKTHLLHAAGNHIREQYQHLRIT
YISAERFMNECISAIRRHEMDKFRQKYRENSDILLVDDVQFIARGEAVQE
EFFHTVNSFIDSRKQVILASDRMPKDIHGLEDRSRTRLERGLIADITMPD
LETRIAILRYKAEKYNVRLPEDVVNYIARISKRSIRELEGNLKKVKMFSE
LQGLPIDHELVKRILAHHETQSTISVEEIMKLVADHFKVRVLDLKSSTRA
KPIVVPRQIAMYLIKKFLDKSLVDIGKSFGGKDHTTVMNALERVKNLQAA
DQDIAKDIEDLEQRIHNITRV
>Bd0038 dnaB, 
MSTRIPPQNLDAEQSILGGLMLDREALDQVGDVLMADDFYKPGHQKIYEA
IKDLHAKGQPIDIITVTNVLQSQGHMDVAGGPEYLISLLDKTISSANIST
HAKIVKDKATLRRLISINSSLIEKAYDQDFVDVESFVDQAESEIFKIGDT
KAKTGLVGSMEIVKASIQKIEELYKNKAEITGLATGFKKLDEMTAGLHAG
EMTIIAARPSMGKTAFSLNIAQHVALRLKKTVAYFSLEMGKESMMMRMLS
AESKVSMSEIRNGRIQDSAWPKLINAASALSEASIFIDDTPGVSPFEIRS
RARRLKAEHGLDLIMIDYLQLMSMKQKMQSREQEVAEISKSLKAIAKELQ
IPVIALAQLNRGVEGRTEKKPMLSDLRESGSIEQDADVIMMLYRDDYYDK
ENPDKQGHAEVIVGKQRNGATGPVKMRFDAQYNRFRDADPEGSPVSPLPP
PQAPPPMPGGRPKNFAPGSTV
>Bd0384 dnaE, DNA polymerase III, alpha chain
MTNKALIPSQNSRLPAKPRPRAKGFVELLGRSNFSFLQGASSPEEMVSQA
VEFGYDGMALCDLNGLYGVVRGFQTIQSPSLFTASPQVKENFHYLIGSEL
TLTDESSVVLIPMNKQGYSHLCEILTLGKRQAAKGFSKLSLEQIEKYNQG
LLCLALPPWTDERYEKLEKIFDNRLYLPLWRDLTWESQEFCRQGFALEEK
YKAQLFVTQRPFMHSPERKPLFDVLTCTLHHTTLAEAKNKLIQNSERCLK
SLEDISWLWQDRLDLVEKTVEISARVTFSLNEIRYRYPASSLPSGMTPTE
YMRHLTLKGAESRYPEGIPDKALKQIEHELELIKDLQYEDYFLTLKEICD
FASERKILYQGRGSAANSVVCFCLGLTAIDPVKMDLLFERFLSRERREPP
DIDIDFEHSRREEVIQHIYEKYNERHAAMVCTVIRYRSRMAIRETAKVFG
MPLAKINAMIKFMGRDGMKRLLDPAVAADFGMEPGPWKMFMALAQQLHGF
PRHLGIHTGGFLITQDPITEMVPVEKATMNGRYVIQWNKDDVDFLRLMKI
DVLSLGMLTCLRKCFDLLRDVKGRDYSLATLPADDKPTYDMICRAETVGV
FQIESRAQMNTLPRMQPRNFYDLVIEIALIRPGPLQGGMVHPFLKLRQNP
PKEIKYAHPALEPILKKTMGIPIFQEQVMKMVVAVADFTPGEADELRRVM
SSAWKRKATMGGIEQRLRTGFARHGISSEYADQIFKTIEGFANYGFPESH
SASFALLTYASCYLKCHYPDVFACGLLNSQPMGFYAPRTIIAEAQRNGVV
VAPLDVQKSDYDYTIEKTAAGDLLRVGLRSIYGIPEVLIRRIEDSRKEEG
LYIDLADFIRRTQLPRSVLLKLAAAGAFESFNSNVRELIWNLESLSLDQQ
SFLWGHPKEQFELGEDDDEPEHLPFESNWDRLRREYDSKGYSVESHPMSV
LRTYLHSKSEALREKRFVPYFSSEDLKRMKTKTKVRVAGLVAITQRPPTA
KGMCFITLEDEFGFVNIVIHPEIYQKDRTTIYTRSLLEIHGQVEKVGAIT
NIRAERILPLG
>Bd2078 dnaE, 
MSFVHLHVHSEYSLLEAACRVKAIAKKAAAMQMPAVALTDNGNMFGAVEF
FFACKDNNVKPILGLDAYIAPGSRLEKKQDRDQVNTGPRRLVFLAQNNDG
YRNLCKLSSIGYQEGFYWKPRIDYEVIQQYNENLICLTGGLRGEVAESFL
REGPDAALAKIRQLKEIFNDRLYLEMCRTGVAEWDRLNPFLLEASKITGV
PVVASNDVHYMTQDDQMAQEVLICIGSNKTLSDESRFRLGTDEFYLKKPE
QMTELFADVPEAIANTLQIAERCDVKFKLKDDQGKPIYHLPTFPTDDGLS
LKEDIARKAKAGLLVRFEEAAARGEMIPEDKIPEYDKRLEYELGIIDRMG
FNGYFLIVQDFINWAKVNDIPVGPGRGSGAGSLVAYVLRITDLDPLPNFL
LFERFLNPERISMPDFDIDFCQDRRQEVIQYVTRKYGQESVSQIITYGKL
QARAAIKDVGRVLGMTFPEVDAVTKLIPEKLGINLKEAMEMEPRIGEMME
MNPTVNTLMDLAQRVEGMVRHAGIHAAGVIIADGQLVRHAPLYKGADGEQ
VVQYDMKHAEKIGLIKFDFLGLKTLTHINHALKLILKNRGKKIQSQMIPM
TDAATFEMMSRGDTAGVFQFEGEGITDATRKIRPSSFADVTAITSLYRPG
PMANIPDFTDRKHGKAPVEYLLEDTREVLSETYGIMVYQEQVMGIASRIA
GYSLGEADMLRRAMGKKIKEEMDQHRERFMKGAIERGHDKQRSSDLFDLM
YKFADYGFNKSHAAAYSVVTIQTAWLKCHYPAEFFAALLSTELSDTEKIV
KYSKDATKRGLTVRSPSVNFSDYLFDVHGDEIYFGLGAIKGVGQNAVEAI
IEARNNLPEKKFNSLDEFFNSIDTRRVNKKVIECLIKAGAFDGFGAHRAQ
LVAGYQKYLDRAIGLQKDREMGQSSLFDLGPSTETKVTLEEVKPWARTAS
LTYEKEVLGFYLSDHPLKGFDTLSELWTTCKVIDLPAQMPAPGSPEAEAL
KAAKKDWKNRDAGKKRVVVAGLITELRELITKKGTRMAFGKVEDLTGSCE
LVIFPDSYARFEAQLRDERPVLVGGGLEVEEGSAKIMVDTVSPLEDILKK
TKRMVLRLDKINPDDYPRLQSLMKDYPGATSVSLEIELGELNRRVLMEME
EAQGINVNNEFFEGVHSLFGRTDFIELRS
>Bd0241 dnaG, DNA primase
MRFSQDFIEKVQEANNLVDIISQYTQLKPSGSGLMGRCPFPDHAEKTASF
SVSETKQVYHCFGCHKSGNLFSFLRDYQGMSFPEAVEYLAGRASIPMPAP
DKEDAQRDQASDKKKLLLKVNKLAADYFSEQLKRAPHDHPVKKYIASRGL
SQEVIETFGVGYALPEWDGLEQYLLSKNVPMALAEEARLVKARNNKSGHF
DIFRDRLMFPILSAMGEPIAFGGRYLEKKENEPKYLNSPETPVFVKGKVL
YGLSQTARYIRSEDLALIVEGYMDLVSLYQAGIRNVVATMGTALTPDHGK
MLKRMTKNVVALFDGDNAGMEAAERSLPILLAADLYPKGLTLPNGMDPDD
YVKKYGSEALKVELERAPDLFVMILARWMEGYRGDASEKVKLADKLKPLF
ESIPDLRLRDLYLAEAAQKMNVGLPWLRQAVGIQGSGPVNSQNRPAMTRT
VQPNPNMGSANQKPPQEVSSSVEGGKISLQGASKAELMLLGLVLKSRANF
DQFVNENLLESVAHEGVKKILEKATDVYRQDLSKFDKLTSLLVSYVDQPE
YLFQVSPANEGDPGYDEEAETKLLRDCFKRVKENFLRDQAKRLARDLKNE
PSSDKLEQIMNIQRNRISLNKG
>Bd0002 dnaN, DNA polymerase III, beta subunit
MKLEIDKRDLLSLIGKTQNIVEKRNTMPILINVLLEADQNTLKVFATDLE
VSLTDQIKVQVHQAGKVAVSAKSLFDIAKELSEGPITLIKKENNWLEIKQ
GKYTSKIVGISAEEYPIFPTYNSQAFIKIHAQVLKEMIDKTIYSVSTDET
RYHLNGVFFELNPQTGFKMVATDGHRMSLVNKPSEDIKVNATQGVIIPRK
GLHEIKKILESIDGTVEIAVEGSQFVLKHSSTILMIRLIEGKYPNYQQFI
PQKLPQKVMISRDAFLTSLKRVSLLANQKSKAVLLNLSNGRMEISSNNPE
LGDAKEEIEVDYMGGEIKIGFNAKYITDILTSMNQDKIDFELNDHLSPGL
MRPHNDQTYTCVVMPMRI
>Bd3731 dnaX, DNA polymerase III gamma and tau subunits
MLGHFFFLFHDLEGWILSYQVIARKWRPQSFTDVVGQNHITQTLSNALKN
GRLPHALLFTGPRGTGKTSSARILAKALRCPNAQNFVPCNDCYSCNEIAG
GSSIDVIEIDGASNNGVDAIRELRDTVAFMPSSGKYKIYIIDEVHMLSTS
AFNALLKTLEEPPAHVVFIMATTEVHKIPQTILSRCQRFDFRRISTRSIT
ERLKLICDREGVTADDEALWVVARQGDGSMRDSQSLLDQVITFANGPLTR
ASVVEILGLTDRALLFETLNALIDRNSQAVLKVIEKIAAAGFEPHLYSQD
LLEMIRNLLLIKVSEAQASQILEMPDSELQALSEMAQRLPEEDIHMLFDM
ALKGGSDIPRAQDPRIVLEVTLLRMASAPKLVDLKTLLQGGAIPSHSAGG
ARPYVPPVSLPVKGHDRIEESQKVLDGPTGLEAMKAALNKASSAASSLKS
NPAPAAKPAATAPAAPVPAAQPTPVVESKPKIASGSTSKERWVNFVELLR
QDDALFAAKVENLLFVKEEGKLISLGVPVKLAFLKDQMADAQVRKKLQGF
IDSYWGAGYSFEVLMSRDQVGESAQAIQQKKVQMAEEDLRNKIIENPMVK
AAQTVFKGQIKSIVELNKRGH
>Bd0934 endA, putative secreted nuclease
MGRSLLFLSSVLLLTSIAAKADLRGDLKKEVTSKHDPISYDKAQVELLGN
VALIRMTDGSYAIDEVYCSTPYGKTHLGNGVGPGKEPASTIINVEHTVAQ
SWFKGRHYFNVGKADLHHLYPSDSRANSMRGNFAFGDVGTIKNMPKCFDE
ERHDIDTESKLGSGSDRELVFEPPVKHKGNVARAIFYFAVRYDFPIPAVQ
EATLRRWNKLDPVDQAEVERNNAIERIQGNRNPFIDHPEYVDQISKF
>Bd3670 exoA, exodeoxyribonuclease
MKMISWNVNGLRSVHRKNFREWFEKEKADIVCLQEIKITDEAIKKDEEFY
HPAKYHSSWAFAEKAGYSGLALYSKKEPDDVRIGLGIPKFDIEGRWLEAD
FGPITVVNSYWPNSQREHTRLPFKLEFCAAAEKRLQALRKKGREVIICGD
FNIAHKEIDLRNPKTNMKNAGFLPEERAWMTRFLDKLEWVDSFRKFEQGP
EHYTWWSYRPGVREKNIGWRLDYFLVNKEASDRLKAASHCPDVMGSDHCP
VRLTLKK
>Bd2176 fpg, 
MMPELPEVEVVRRGLETILKDQPILEKVELMRKDLREPIPAKKISTLVGQ
PLTSIERRAKYLLLWTPKGAMLSHLGMTGTWRVAVPGDERLHDHIYLHFS
GDLRLAYRDPRRFGCFDFVQDPLKHPKLADLGPEPLEAEFNGPLLWEKLR
GKDVALKVALMDQKVVVGVGNIYASEALFAAGIKPTLPARKLSLERASLL
VGEIKKILSQSIKAGGSSISDFAQASGESGYFQTSFRVYGRDKEPCVTCG
QQVKSKVLGGRNTFWCSRCQK
>Bd0005 gyrA, DNA gyrase subunit A
MENNQEEKGVTLVDISKEMRGAYLQYSMSVIVGRALPDVRDGLKPVHRRV
LFAQSEMNNRHNRPYLKSARVVGDVIGKYHPHGDASVYDTMVRMAQDFSL
RYPLEDGQGNFGSIDGDSPAAMRYTEIRLTALAEELLNDLEKETVSFGPN
YDDSLLIPTVLPSKFPNLLVNGSAGIAVGMATNIPPHNLGEVIDGCIHLI
GNPDCQIEDLMQHIKGPDFPTCGVIAGREGILQAYKKGRGIVTIKAVAEI
VQVKDREEIIITEIPYQVNKAKLIESMADLVRDKQIEGISDIRDESSREG
MRIVVVLKRGENASVILNRLYKYTQMQTSFGIIMLALDAKNQPVTFDLKG
MLEAFVDHRRDVVTKRCIFELKKAQERAHILEGLKKALDHIEEVIKTIRA
SKEANAAREALMSKFEFSERQAVAILEMRLQRLTGLERDKIVAELAELMK
QIDWLKFVLSDVREIYKIIVSELEDVKKRYADPRRTQITGDLSDLEDEDL
IADEQMVVTVTNTGLIKRIPVEEYRVQKRGGKGLKGMETKEEDYVTDIFS
ASTKTMLLVFTDKGKVYWCKVHRLPLGTRTSKGKSLANVVQLSNGESVRA
ILPVNEFSENKYAVMLTEKGVIKKTSLDAFANPRTAGIIALTTDLDDGVI
DVKISDGQSDIFIATKEGMSIRFNEADVREMGRTARGVKAITLAKDDVVV
AMEVLEKNTKDTILMVTSKGYGKRSETGEYRIQSRGGVGIITQKTTDKVG
LVIGTKKVADNMELILSTDKGQVIRMKVTDISVLGRNTQGVRLINIDEKD
ETVTGVAVVAEDETATEETPAPEGAPH
>Bd1639 himA, integration host factor, alpha subunit
MTIMAGQNLGKSTVTKADIVENVYQKIGFSKKEASELVELVFDTLKTVLQ
DGEKVKISGFGNFVVRGKNERIGRNPQTGEQIKISARRVLTFRPSQVLKA
MLNGEEYAHLKDEDDDDDYDDNE
>Bd1041 holB, DNA polymerase III delta' subunit
MARMLDFVLGHQETIKKMVESFENGKPGQTFLFVGPGGIGKKLTAMGLAQ
ALLCPSSPRGCGKCPSCFRISQGSHEGLKLIAPNGANIKMEQAKEVLEFL
SLKSLTGNRVIVIDQAQTLNPQAANSLLKTLEEPPEGTFFFLIAPSVAGI
LPTIRSRSRIVQFRPLTQEDLGKRVKAPAWALKAAGGSFEKLAQLQDGPE
QEVREKAVELLTLFIQDADFLLNELWRNEFKDRAQGQRMISYWIGFLKDA
ICLQEGAKTQIVNLDQAPLIKVLAELERPRILNLIQKALQVEQAFAANRD
PQLIIEEFYVTSKA
>Bd3108 hrpB, helicase
MMSQELLLPIDSFVPEIQSLLKNGQNLVITAAPGAGKTTRLPPALLQVTS
KKVIVLEPRRMAAIAAAHRIAEEQGWQVGEEIGYQVRFANKTSNKTRLVF
MTEALLARQMIDDPELSDVELVILDEFHERSMHVDLALGLLRELQELGRD
IKILVMSATLEAEKIASYLGDCPIVSVPGKLFELDVRYQKGSQQLQTFPQ
FFDAVAQTVKDAQLQTRHDILVFLPGVGEIDRAKDALQSWADSKNIELVP
LHGSLNLEDQRRALKKTSQQRVILSTNIAESSVTIDGVNTVIDSGLAKNM
KQDHRTGFSRLELGRISLSSAIQRSGRAARQFPGVAYRMWNKMDELSFGK
SEVAEIQRVDLTESLLFLSAQGVTDFDSFSWFEKPQKVAIENALRYLRIS
GAVDDNNKITALGRKILHFPLPVRLAKLMLVGMDLGAIELASEMAALLQE
RDILRRESVASFLGDNLECDLSARLEVLHQFRQNKKAPAGSAYFSLQTVD
QAARQIQELAKRLQKSSDTPTAALKKDQQLALTKKILLTAYADRLCRRRG
KTERALMVGGRGVKLQNETLVKNSEFFAALNGVEGSSDAETMVSLACGAE
KDFVLDHFRNDIVKTRDVSFVEEKGQFFTREYRSLYGLPLEEPSLSPASA
TEVSEKLPQILADKFDLVLKTNEALSHWWERLQFLQQQEELNLDIEKLKV
EAFTQACMGESKMQAVMEKDLCFFFESVLPPETANTLRREIPDRIEVPSG
SKIRVIYPSDKPPYLEVRIQEVFGLMQTPKVYKQTIPITLHLLGPNFRPV
QVTSNLESFWKNGYPEVRKELRIKYPKHQWPEDPADGIPEAKGRRRH
>Bd2104 hua, DNA-binding protein HU-alpha (HU-2)
MNKAQLVELVAEKTKTTKSQSELILDATLEAIQEALKDGDEVKLVGFGTF
SRSSRKARQGRNPKTGETVKIPSAYIPKFKPGKDLKDALN
>Bd0057 lig, DNA ligase
MPDAFCRDWTSEMGANYSMSKKRHEELKKIISEHDHNYHVLDKPTITDYE
YDQLFAELLDIEKNPKGLDLSDSPSQRVGGTVLEGFTKAQHRLPMLSLAN
SYSPEDIFEFDERVRKFLNTEDPVEYLCELKFDGLSMELIYENGQLVRAI
TRGDGTVGEDVTHNIKTIKSIPLKLSHKNPPPLLEVRGEVLMFKEDFARL
NETQQENGQQTFANPRNAAAGTVRQLDSRIAASRPLRFFGYALGAVEGET
FNTQKNIQEYFNDHGIPTVLPYKEDLLVVAKGPEEVVKYYHHIEKVRPKL
PFDIDGVVIKVNSLRLQEDLGLVARSPRWATAAKFKPEQAQTTVEDIVVQ
VGRTGALTPVAIMKPVKVGGVTVTNATLHNQDEITRKDIRIGDTVIIQRA
GDVIPEVVEVVNPDKRPADRLPYSIPERCPACDSVAVKAEGEVVTRCVNP
LCIAVVKESLKHFVARRAMNIDKVGDRLIETLVDNKLLTRFSDFYRLTKE
QILSLERQGDKSADNIIKSIENSKNPTLARFIFALGIRFVGEQTGKHLAD
HFLTIDKFLEASEEELLQVPEIGAKVAKSIRDWTGNPKLVDEVKAMIELG
VKIAGPVRAQEGSLSGMSFLITGTLPVKRDDAKDLIERNGGKILGSVSSK
LNYLVVGDDPGSKVEKAQGLGVKIISWEELQAMI
>Bd2252 lig, 
MFVVQEHHASHLHYDFRLEWQGVLKSWAVPKGPSLDPHLKRLAVQVEDHP
LEYGTFEGVIPEKQYGAGPVYIWDTGTWIPKAPVAAGFKKGHLEFELKGK
RLKGTWDLIRTRMQGRQVQWLLVKREDRFARAGYEAPLIGDKSTVRRRVH
TRTSFSFVQPMLALLVAEPPRGPQWWHEVKWDGYRIQAHLQGAKVKLYTR
AGHEWSGKMETVVQSLATLNVQSAVLDGEVVVLDRQGRSHFQKLQNYFDS
DPDQELTYVAFDLLMLNGEDLRDQSLKERRRKLQGILKGKHKNLRLSQQL
KLNAASWKKLRRQGLEGVISKKLDSTYISGRKGEWVKSKFLNRQEFVIGG
YVPGRGSRSDFGALLLGVYEKGQFRFVGKVGTGFSQNSITSIKKQLDRIK
VAKKPFSAGDPPKSGAVWVRPELLAEVSFASWTHGMHLRAPVFVQLRKDK
PAPEVTSDALLLTNPDKVLFAAEGITKLEVAEYYIAMVERMRPYFENRLL
ALVRCPDGSAGKCFFQKHLNAKADTIAVFEKDDALYVKDARGLLELVQMG
AYEIHSRNSRAEAPGKPDQFVLDLDPGPGVAWGEVVSAALLIKKDLELLG
LRSFVKLSGGKGLHIHVPFRPGPSWEEVKRFTHSLALNWEHRFPDRFVSK
MAKKIRVGRIFIDYLRNSKGSTSVLPYSLRARDRSSVALPVAWTQLKKYK
SGDAVTLKRALQILKKGRDPWANYFARAPVLPVQKARSAS
>Bd1564 mutL, DNA mismatch repair protein MutL
MQIPPMSIQILSPEVVDQIAAGEVVERPAHLVKELVENSIDAGATRVHVE
FYDGGRIVKVIDNGKGMSPEDLPKSLERFATSKISKTDDLWSLRTFGFRG
EALASIASVSKLTLTSRRAGDEQAHQLISEYGKRKEIDKVGGSQGTTILI
ENLFDNTPARLKFLKSDSAENSAIKTTLKAMALSHYDVEFRIQENGKLVA
FWPACKSRKDRVEQILEIKPLFEGEASRENVKAYAVFADPHNVAKTSKNI
WLFAQNRWIQDRSLQAAVNEAYRSLLMHGEYPIAAVWVEVDPDCVDVNIH
PTKSQVKFQDPSLAFRAVAAALRGTLEQAPWIKRSDVATQNVTMPLTQNS
SEEFKSTDGLPNFASQPMPQQNLRFQDNSLEVTQFQKKEFSFPASSFPVS
SLQQPQTTYQALAESAAQRESFAPKAEEASLGYWSSLEVLGQANLTYIVT
QSRDKLVFVDQHAAHERVVFEKLMNAWKGGKVDIQDFLFPLAIDMSPEKV
EGLLTMAKEMERLGVFIEALGPGTVGVKAAPLMIKESSLSGVLDKMATEI
VDQGGSYSLERTVGDICATMACHSVVRAGQSLSPDQMRSLLRDMDMFPLS
SFCPHGRPVSVEYPYYKLEKDFGRIV
>Bd1277 mutS, DNA mismatch repair protein
MQDLVVLDWIEILEKIKAHATSDMGREAIMQTEPLKTPQEAHASFQEINN
ATEVLNQGVRPFMTSLDLYSTWILRLKKNAVLKTLEMKDVRSFCLEALAL
KEALHPVQNDWAQRIHQSLMKAEEPVSAIDQILTPSGDIRSDASETLFRL
FREKERLAREVQSTLDRLVKDHQMENVLQDKYVTTRDGRWVLPVRSGMQH
HLPGVIHGSSQTKQTVFIEPEKVIPSNNRLRQIEVEIEDEIERLLTELSR
YLSSKSLDIESSQVLMKDADVRFAQAQFANQVEAHPIEFSDDSMELIEVR
HPLLQLSGKKVVANTVLLEGHKSILLLSGPNAGGKTVLLKSIGLAAQMAR
CGLPICASETSKLPFFKNVLIGIGDAQSVDEELSTFAAHLKILGKAASVK
GRDNLILIDEICGSTDPEEGSALGRAFIEEFSNNDVFAVITSHLGPLKSG
WDEQSRVYNGSLEYDPKTGRPTYQFLAGIPGDSMAIQTAKRVGVAQSIVQ
RALDVLAPATRARLEGLEQIEQLKADINLLQDHLKKETKKATEMKRKYEG
MLEQFNKDKDEWLQRTVKKAERKVEEAIAHAKADETFKRHTALQEIKYKL
PEIVKAKPITQPGAPETAEEFGKKFPPGSKVYVPTLNQDGIIQSTPNSKG
DVMILSGSVRLQLPWTILKPAGKPSNPTSQLIRQSSNITVALADDDRTLD
LRGRTVEDALQELELTLDKAAQAREDRIKIIHGHGTEALKKAVRTYLSRS
IYVKKWKAGSPEGGGDGITWVEIGEA
>Bd1954 mutS, DNA mismatch repair protein
MSNLTPLMKQFWDIKSVHQDKILLFRMGDFFEMFFDDAVKAAPVLGIALT
QRNKKSQDETPMCGVPHHSIAGPINKLLAAGFKIAICDQLEDPKLAKGIV
KRGVTRVLTPGMVYDSDTLDGTKPHYLVSLDSESLSFLDTTTGEAFFFRS
KKTTELLRFLQILPVAEIVIAKEDESLLTGVDGVLISHHEDIADLLHPLL
KNEAPMSAARLVSYVGNMSGEESLATISPFVMRDLEHRLEISSTTLRHLE
VFSTYKGEGLGSLFHAINRTQTSAGSRLLRQWLSFPLRDLNAIEQRLNSV
EFWRNHVLELKRVRQILGQMGDIERRLGKISQPQCNGRDLLALAGSVHAG
ISALEVLVHATGGKANFEGLRELAYKIERTLVEDPPLATKQGYLIRTGVS
PELDELIELSTNAQAMVSRMEAEEKEKTGISSLKIRYNNVFGYYIEITNS
HKDKAPAHYQRKQTLTNAERYCTDELIELERKVLSANTKRADLEFEFFEA
LRKEILAQCPGLLALAHECSEVDVVASLAWLSLEEKYVRPKFSADGSLKM
KASRHPVVEQTVKKNFVANDLELRQHSCLLLTGPNMAGKSTFMRQVALNA
ILAQMGSFVPCDEAEMPIFDAIFTRIGASDQLSEGLSTFMVEMTETSAML
KNATKDSLVILDEVGRGTSTFDGMCLAQSILEHLLSDVKALTFFATHYHE
LTSLDQSFGQITNAHMTVAERNGEIRFLHTLVKGPALKSYGVQVAELAGL
PATVTKRAKSLLRDIESKRVQASSQLSLLDSLTAEDPYIEAVEVVDPETA
RRGETMKSLMEELQKFPLMQTSPLDVMNQVAKWKEIVERV
>Bd2912 mutS, MutS-like mismatch repair protein, ATPases
MTDTASVSGTMTKSLNNAQVLHRKEQRLNLLLARWQAKLQRHQSGRLMAG
LLFFASLVPLSMNSEARAGFAVPAVVLLVFIYLVVRTRNIARHLQHLQRL
QQFVVRQKKRCLGQMSGRSWKQAQEVSAEYPMIRDLGLVGSHSLWTVLDE
TFSEGGLRRLLHWMSVGPLNSEQLQQRQQQIQALRPQAWFFTRLGIQANS
NELNLSTLQIQEFLKNSFVGPQFIKLLVANLVLWVLTVLALVFAVTTKTA
LPSFLFAAFPLLSLFSLGSVGRAFMQGTGLSHHLSALAPLFLAIEKKCES
SPALAQLCGQIYKVRPSRTSQKLDTVLGFVGTQTNPILHFILNAMLPWTV
TSVYFLERLRQKMVKDFPQCVEELSEFEVLGSLLIFDKYQTQTYPVLSGA
MNLQCKQVFHPLLDRNKAVANDFGFPHSKSLGLLTGSNMSGKSTFLRTMG
INQILSNMGAPVFADSYQTVPMKVETCIEVSDSLRDGYSYFYAEVRRLRD
ILLTAATDTPVLYLIDEIFRGTNNRERQIGSRAVIQTLANEKTSLGFIST
HDLELTVLEQSSPSVMNLHFREDIDSAGKMVFHYHLNQGPCPTTNALRIM
AAEGIKVDEV
>Bd2220 mutT, Nudix (MutT) family hydrolase/pyrophosphatase
MTKQPVLVVAAVIQRQEDPEGRILVVRRGPDQSGAGFWEFPGGKVEAGEA
PEQALAREITEELALNIRVHDLIGEVDFAYPSKTIRLRVYWASVKGGEDL
VLTEHDDFRWQRAEEIDVMSLSAADRPFVEKILNGYGKR
>Bd0714 mutT, probable pyrophosphohydrolase
MTDDSAVESKQKKSKIRKGHWIPVVAGFLRKDGKILVGQRPENNSLAGQW
EFPGGKIENGETPEEALARELNEELGIEAEVGELKLACTHSYGDVGILIL
FYEILYWKGEPRAKHHMMLEWIHPEELKHRNIPEANRKILHKIYKALGLE
WRK
>Bd3437 mutY, A/G-specific adenine glycosylase
MTTLPRMAAQHDYKTDHKQLTQWYNKNKRSLPWRENKNPYRIWLSEVMLQ
QTTVVAVIPYFEKFLQKFPTVQDLANAPEADVMEAWAGLGYYSRARNLHK
AAKALAAGGFPKTAAELLELPGFGPYTSRAVASIAFGEKVGVLDGNVIRV
LSRRYGLKLEWWNGKGRDHLQKISDELSLLGQADVVNQGLMELGATVCTP
QKVMCMLCPWAATCVSREKNLVEKLPLKKPRKESEVWVWKPLVAIKNQKV
ALVQNDYAPFLKGQMIFPGEISMEKNKPKAYDAKHNITHHDIFIQITEKK
SLTGKNLQWVDLKELKKVNPSSLLQKVLHKVKL
>Bd3179 nudF, ADP-ribose pyrophosphatase
MKHLEEKTLSTRQIFKGRYLKIEQDQVQAPDGRTYTREYILHPGAAMMIP
LLPNGNVVMIHQYRHAVKKVFLEFPAGKRDHNEETLLTAKRELLEETGYE
AKDWKFLTTIHPVIGYSNEHIDLYLARDLTHLEQRLDQGEFIEVVEVKPA
DLMQLVLEGKVSDVKTQIGAFWLDKFLRGEWN
>Bd0389 ogt, 6-O-methylguanine-DNA methyltransferase
MTNLEFKIYKVPSEFGEWLAAFEDDQLIFLGSYNAGKKLVEGDLTALIEK
FYAVRIGSFQPAKWNQGNFWATQHQIKLQGTEFQMKVWLELLKIPAGKTV
TYSELAKKLRKASAVRAVASAVGKNPISYWIPCHRVIGKGSNLLKYHWGP
EVKEYLLMKEGAL
>Bd2616 ompA, probable outer membrane protein
MVSRTHKILASVAVAGFIAGCASKPPNVQSISSSANPTAEIEKTEAMINE
ARSKQIDVLSPENFTDATKALDKAKQKKDKDKPNAEILEQVAYSRAWLNE
ANTRAEIARTSMHQITDAREGAMKAGAPKLYPKEWEKAGKDLEKITVAIE
KGNLSPADKRGEEIVSRYRDLELKSVTKAYLGTAKDNLDTAKKAGADKSA
PKSFGMAAMKYENAEKLIKADPRNAPVIARASQDATRESQHLMEVTRKVN
AGNSEELVLMAERQQRTISNLRSEYSSTEQELQTVQSEAERQRMELEKQQ
TLLNRAQALRSQLKPNEAEVFTENGKLMVRLKGLQFPTAQSNLGPKNQAL
LKKVEGALAGVTPKKVIIEGHTDNVGSAEANRILSEKRAQSVENFLVSQG
TLPAEKVESVGMGYDNPVGNNNTAAGRAQNRRIDLVIETE
>Bd1321 pcrA, ATP-dependent DNA helicase
MDWFKGLNPEQQKAVKHNFGPLLILAGAGSGKTTVLVSRTGRLISERVAQ
AQEICVLTFTNKAARELKHRVGAKLGSSGSGMWAGTFHSFGLQILRRFHK
HAGLSPYFGIVDQSDCNAIVKDLIKDIKNSGKDKFDADKILNMINDRRTG
MAPQTEAFDEYHEMVEVLTPKFTKRLEHLGVVDFEGLLIKPITLFKENPE
ILEKVQGMFTQVMVDEFQDTNRLQMDLIAQIVKSHNNIAVVGDDDQSIYG
WRGAEVKNILNFPQEFTPCEVIKLERNYRSSAEILAVANAAISKNKNRHG
KILRPQVAEDTGQLPELFILDREEDECEFVVTEILNFQRQGYSYKDMAVL
YRSNTQGGLIESSLRRANVPYHISGGTSIFDRREIKDLMAYLKQALAPNE
VSLRRIINVPSRGIGDTSIEKLSEFALKKRINFVDACRFWQEAGVQDKAG
AAIDDLMMFIENLPKNILDFQVGSSPGAKMVQIFQDIGYREYVYGTAADP
TSAEKKWMVVEILGRILDSFLGRRSYDVENIKSFVDCMLLRDDLSEEELE
NKVQLMTLHASKGLEFPVVILAGLEEDLLPHKNLGSDIDEERRLFYVGVT
RAKKRLVMSRCQQRKKNGAVRPVAPSRFLLELPKELYTEFPLGARPVVGQ
EREDLVASFLSKLDSKLGTGKK
>Bd3339 pcrA, ATP-dependent DNA helicase
MDVLDFVTKNLNPAQKDAVETLEGPLLILAGAGSGKTRVLTHRMANMIGQ
GVAASDEILCVTFTNKAAKEMEHRIYKILSDMGAVVQTQLWISTFHSFCV
RVLRQHITLLDYKPFFGIYDSSDQLSQIKKVMTALDINDKMYPAKNFQSR
ISSAKMMGLSPEGLEKSSKRLMDQKTVEVYKAYEREMKKANSLDFDDLLL
KTYDLFRMYPDVLQMYQKKFRYIMVDEYQDTNHIQYLLVQMLASAHRNLC
VVGDEDQSIYSWRGADIKNILDFEKDFRDAKVIKLEENYRSSANIVNGAT
AVIKNNSQRKDKTLFTSNDPGDLIHVREEKNEYEEGRFVAKTIQSMMNEG
EGSYNDYAIFYRTNAQSRVLEEQLRTMGIPYRLVGGVRFYERMEIKDMIS
YLKLSINPADDIALKRIINVPARGIGKTTIEKIEEYAAHKNLSMFEAAEK
ACEERLFNAGTTGKIRRFIDLMKDLQQNAQHLKLLEFFAVVLDRTEYLAA
LKKDESPESQARIENLEELDNAIAQFVQERGEESTLISFLEEMALVNDVD
SLDQEQNSVTMMTLHISKGLEYPYVFVVGLEENLFPSARSAESDNEQDVE
EERRLAYVGMTRARQKLWLTYAKMRRVWGQEQFNPPSRFIKEIPQNLIDF
KTSAEAPRFMARYGSSSYDSDFGGTPKWGATSSDRNRARTQSYDDAQDFP
DYENDGAGSAPFSKGMRVRHPTFGVGTVYATEGTGENFKVSVMFTDNTVK
KFVVKYARLERV
>Bd2206 phr, deoxyribodipyrimidine photolyase-class I
MSKVTLFWFRRDLRLDDNAGLYHALKERSAVLPLFIFDSEILENLDDPAD
ARVTFIYEQIQDMKQQLNAKKSDLIVRHGKPLEVLKTLSDEMAVEAIYAN
HDYEPAARKRDEKVAAWAAKAGIEFLTFKDQCLFEKDEILTDARKPYTVY
TPYRNKVLANLSEFYLKSYPNDLYESSYAKVKKAEPLLTLKSLGFERSNI
EFPPMDLSTKMLKTYHATRDFPADEKGTSHLGLHLRFGTLSVRELAREAK
KYSPVWLSELIWRDFFMQILWHFPQVENQSFRPEYDKIAWRKSKADFQKW
CEGRTGYPLVDAGMRELNATGYMHNRVRMVVASFLCKHLLIHWYEGERYF
AKKLLDYDLSANNGNWQWAAGSGCDAAPYFRIFNPQTQFEKFDPDGKYVQ
KWVPEYGTDEYPQPMVDHNEARGRCLQAFTKVLKK
>Bd3148 pkn, 
MSQAVEQFGKYILLERLAAGGMAEVYLSKSTGAVGVNKFVAIKRILPQYS
DHQDFIEMFKEEAKIAVNLNHGNVVSIYDFGVERAQFFLVMEYVEGRNLR
QILNELKKTNTQFTIEQIVYMIKEVAAGLDHAHRCIDGTTGKPLNIVHRD
MSPQNIMVSFEGEVKIIDFGIAKAETQMEATKAGTLKGKYGYMSPEQADG
QSIDPRTDIFSMGIVLWELLANDRLFTSNSEAAILRKIRECQVPSIRKIN
PSVPPELERIVNKALAKDKSLRYQTAAAFHRDLNRFLNTQYPEFSPHDFS
VFMKNAFSAAFLEQRRKLVEFAKIQSQPSSEDKTIVTQTDMRTPQRPPAY
APPAEAAEGEERLDLDTSTDIRVNLDNLKTPPKPSMPKVPGATDTNITQT
RTSATGTFASGPGTMTRTPSSVSPMGTRTSIGRPAPSSSMEDITGIAMKA
VGALLVVVGLWWGYTNFVAKKSPGKSGATAGLTPKPATAGNAQAAGTLQQ
TELAATSPEYTVTIYSNPGGARVVIDGNDTGEFTPVRKTVKANTPYSLRL
VKEGYTDLVTTITPTYEAYSFTGTLQRLPRVASLIINIVNGGANPELRIA
GVPVSIKPSGDAYLIQAEVGVKIQARNKTTGLSAETTITVPADQRKIVDL
YLK
>Bd0802 polA, DNA polymerase I
MKKIYLIDVSAMFFRAFYAIRALSSPSGVPVNAVYGFLSMMIKLLKEEKP
EYLVFCYDRKEPSFRKTMYDGYKAHRTEMPDELAQQIPYIKRLADLLGVP
AFEVESFEADDIIGTLTKWSRRNGMEVFIVSGDKDFGQLIEDGVTLYDTM
KGVRYNAEGVFEKWGVRPDQFIDYLAIVGDASDNVPGVKGVGEKGAIKLL
EQFKHVEDIYENIDKVESKSVREKLIASKDNALLSKKLVTISCDVPMPDD
LEAYKLKPFKADELRAFLHELNFKSFEKSLFGTVDTTPAAAAPAAPAGPL
IKTAAPSAPLSIADDVAPTIVIAKEERQFTEKSMTTRELADFLAEHQSLW
GFSDMRGVFIGTESQIIQVPDHEYLGKLTDTFQVQWHGYDLKSFWHKIGA
KTPVAAWDSQLAAYVLKAGDTSDFAKIYTRFMADVLPDLASPSQLYNAQL
NFATTLKSQLQTVQGEKVYQELDLPLARVLLSMERLGVRIDKDLLAKQSE
ELAKDIAEIEKQIHEAAGESFNVGSPKQLGVILFEKLGLPAGKKTKTGYS
TDEEVLLGLEHPIAKLVLQWREMSKLKSTYVDALPTMIDPKDERVHTSFN
QALTTTGRLSSTQPNLQNIPIRTARGQQVRKAFIAAPRMKLLSVDYSQIE
LRILAHISEDPNLCKAFAEDLDIHAATAAEVFGVPLKDVTAEHRRSAKAV
NFGIAYGQGAFGLAENLGISRTEAKDIIERYFNRFKNVREYIDGTIKMAH
EKGYVETLFGRRRYIDELQSKNMALKKFGERAAINAPIQGTASDLVKKAM
IEVFEKVPVRMLLQVHDELIFEDFEENLQKHSPQLVSIMENVMKLKVPLK
VNYAIGNNWDEAH
>Bd3834 polC, DNA polymerase III alpha subunit
MKQPHPFCINVFMRFIAFDLETTGTVPGVDQIVEIGAVRFIDGQPEAIFA
TLIDPLRPIPPGASAVNGISDDMVKGKPLIDTILPAFAEFCGEDVLVAHN
APFDSQFLIADIKKHETTAPRGVILDSLPIARKVFPGLPNYKLGTLVQHL
KIPTSNFHRAEEDATYLGHMFSQMMKRISIGGQAPQVGNLIALTGKPELR
FPQIVRQPKQMDFFGGL
>Bd3251 polC, DNA polymerase III alpha subunit
MNLDLPLNEYTYVAFDTETSGAYPVGHDVVEFGAVKWYKGEEVGRLQFLF
KPREPMTDFIIGIHGITNEMVADAPLITEKIREIHEFFKGAIVMAHHAPF
DLGFMAIDFEKNQLPLLPEPALCTSLLSRKWIHGVENHKLQTLVRHLNID
GGQAHRAYDDAKACLHVGLACFAKMPPEMTLAGAIKSQGKNLWWKDYSLA
SLSAPQFKSIIEAIQTKKDVDMVYEGGSDRGSTRRVTPIGIVRNPDGDYL
QAFCHKDQAAKRYYLNRISDAQVIWI
>Bd3775 priA, similar to primosomal replication factor Y
MSSTQLWKVAADAPLPEALTYSSDLPLQRGQLVTVPLGRGGRKVHGLILG
PTQEVPDFEVKAVDSIVEEYAPLPEPYVKWLEWLAQYYLHPVGQVVQSAF
PPLRKTEKQRASKRPPVIPQLEADSALNLTDEQQTCFESIAKFSSFSTHL
LFGVTGSGKTEVYLRLLDKVLSEGKRGIVLVPEISLTPQLIQRFARRFGD
KIAALHSQLTDRERTNQWWDIVEGRKSILIGARSALFCPIDNLGLIIVDE
EHEPSFKQDEKLKYNGRDAAVMLGKQMNCPVVLGSATPSLETWKNAVEGK
YHLHRLTRRVANRALPDIEVIDLRKLKSDDEEKQKAITKYSHLPFWLSPD
LYERMHQVLDRGDQAALFLNRRGIAQMVVCPACGHTRECPNCDISLTLHA
HSHLICHYCDYHENFKTKCPDCKEGQLEAIGLGTELLETDLTRLFPGKKI
ARADRDEIQSRADLEDLIANMESGDIDILVGTQMIAKGLDFPKLKLVGLV
LADVGFNLPDFRATERSFQLITQMSGRSGRHVKDGESPGLVIIQTFNTEH
DSITFAKNHDFEGFATHELEIRSALNYPPMGRLVSFRIQGTKLGQVEETA
RLLARRAQALKTQFPQYGSIEVLGPAEAPLSKLRGQFRYHLLIKTTQPAA
ANPFSRQLLGDQDWVPSGVKILIDIDPMSLL
>Bd0218 radC, putative DNA repair protein
MPPRFRTAVLNPSAKSGQFSIKNPVILQQRTNMREVSTSLQAYEILRNEI
NPHAEELWVIALDSQMNLVLKEMLFRGTVDFCMIHPRDIFRCLVQANASS
FILAHNHPSQNVLPSEQDLILTRRIHQLAQMFEIPLNDHLVVCENNYFSM
ADHGYFKKWRKTRTVRSLTV
>Bd0386 recA, recA protein
MQIASLLTHNLHSNLCVNGELQMSTLALPELANIPFVSAEQLQPPPGLPT
GVNVLDDFLLWKGVPQGDLSLLQGAPGTGATSLWIRIVQNVHSQNKWAAW
INGDAQLFPAHLSSYKINLKKLLVVKEPKENEQLFWLLQELITSSLFEVI
GCNLKEMFLKNHQLQKLKRLCRLHKVALVFVNQKASKFVNPLFSLMIHFQ
RDFITIQRALHRPTPFNLAGSMIHANFMHQFKNTARKLLS
>Bd0512 recA, RecA protein
MANATVDNKANSEKIKALELAVSTIEKQFGKGSIMRLGANESLVKDVEAI
STGALSLDIALGIGGLPKGRICEIYGPESSGKTTLCLSVIAQAQKKGGVV
AFVDAEHALDINYARKLGVNTEDLLISQPDTGEQALEITETLVRSGAIDV
LVVDSVAALVPRAEIEGDMGDSHVGLQARLMSQALRKLTAAINRSNTLVI
FINQIRMKIGVMFGNPETTTGGNALKFYSSVRLDVRRVGAIKNGEDVTGN
RTAVKVVKNKMAPPFTKVEFDLMYGEGISEEGDLLDLAVTANMVEKSGAW
FSINGERMGQGRDAAKNFLKEHPEYMVELRKKILAANGIGKLLVDTNGNN
GEDHEGTEPVEIEAEDAAPKKGKKGKH
>Bd2324 recG, ATP-dependent DNA helicase RecG
MVHNPCMALRLDTQIQFLKGVGPKLGDLFSRKGLKTLGDLFEFYPRAYED
QRAARNISSLRPDDIVSIKATVVAVHSVNMGRSARKMYDVLVRDASGQIH
CKYFRVPYKGYFERFKPFTEVRVVGKVTEYRGRLEFHHPDIKDVEPDEET
QDALIPLYTEIEGLATAKIMKLVRSAFAQIEEWPEEAFPKWMREKYNLIP
RKDALKDIHFPDPNKAKQYSEFKTAAQKRIIFDEFFWLELYLASKKAGFQ
KEGAPQIRNSGEKMRALLQSLPFEMTGAQKRVFTEIKADLEKGHPMHRMV
QGDVGSGKTLVSFMAAIYAAESGYQSCLMAPTEILAEQHFKNARKVLEPL
GIRLGLLVGKSKASERKQLLAALGAGEIDLIIGTHALIEDEVQFANLGLV
IIDEQHRFGVEQRGVLKNKGNSPHFLVMTATPIPRTLAMTVYGDLDVSII
DEMPAGRSPIQTRATFESKRPQALQFMLEQIQKGRQAYIVYPLVEESEKI
DLKDAVSEYEKLKELYPQLKIGLLHGKMKPDEKDQVMDQFRKNEIQVLVS
TTVIEVGVDVPNANIMIIEHAERFGLSQLHQLRGRVGRGEHKSFCILIMG
YAVSEEGKARTEMMEKTTDGFKIAEFDLEMRGPGEFMGTKQSGLSGFKLA
NLVRDMAILQEAREAAFEVLRKDPRLSYVENQGLKAELLREHGPAALAGI
A
>Bd2232 recJ, single-strand DNA-specific exonuclease
MNPLWTLRESENEPVIPSNVEGQWPKLITKVLAARGFAEASHVEKLLFPK
LADLKDPLVLKGMSQALERLGQAYLNKEKICIYADFDLDGTSGLALLKTG
MLALGFPDVLHYQPKRLAEGYGFHAHAVEELKKQGVSLIITVDVGITAHA
AIDKANELGVDVILTDHHLPADTIPSAFVVVNPNQGDCPSGLGYLCGAGV
AFYLLRGLKRHFHDHPQLPKNNWDLKEVLDYFTIGTLTDMVPLVDDNRVL
VKHGLVKLAETKRAGLRALLEELDLTGRPLTSQDVAIRFAPKLNALSRME
SGILPIDIFLLDDPSQARDMVRQVMKNNSTRVQLQGDAEAEAQQLLQGWP
HQDFVFVASRNFHRGVLGLIATKLTQVYNKPAFVGAVGDDGMIVGSARLP
QGQEACLVEAMSSAQELLSRFGGHSAAAGFEIAETKVSTFVGKLADHFSD
LREKPKPLEIFYDVEAGLSEVSEALMKWYDFVGPFGAGFSIPLIHFTNVQ
VLSKRELKGGHLRLKIADADGGASAEALLFTPTPRQLDTLTNVPGFYHVL
GELQWNYFAGQKTVQILIRDLKAAT
>Bd3173 recN, DNA repair protein
MLLELKVSNFAIIENLHVSFKEGLNIMSGETGAGKSVLLKSLSLLMGGKG
SSDTIRTGATQATIEGSFDISARPDIQKMLHDMGIEADEHTLIVRRVLSS
GDKSKVYLNGSLSTLNSLRDIVAPMVELAGHSAPLIEMTGQHENRNLMSK
HYHLDLLDQYAGTWDKRLLFTEKFNRYHAIFAEIKKLESDAKQKAQRLDF
LTYQRDEIANLDLSPGEDHELEVEVKKLKNSNRIGAFVDQAESALYTDDD
SAISRLNAILKKGLEISNVDPQIAAKLENLEQAKTLIDESIYDLRQYANK
IDADPQRLEEAESRLSDLRKLQKKYGATVDDILKALMEMEIEISNLQNSE
SRVESLKKEAAVILKELETLGADLHKRRQKGAELLADSVNAELLDLNMKG
VTFHVMTEKLQELASTGLSDVEFLSQTSSKDAKRPLAKFASGGELSRILL
SLKRVVGSSNQPRTYLFDEVDTGVSGETAEKVGRKLRTIAKGQQVVCVTH
LPQVAAFGDIHFFIQKSPQKDSVSMVVSELKQKDRVQEIARLISGEKISK
TSLAHAEQLLAEAKQN
>Bd3210 recQ, ATP-dependent DNA helicase RecQ
MKVSFMEIAVSPQENQLKKYFNLSGFRRGQKEIIESVMGGRDVLAVLPTG
GGKSLCYQYPAVATQKLVIVISPLIALMKDQVASLRRYGIPAGALHSGQS
DDDKREVFAEINKGGAFVLYLSPERAQKEGFHRWVQNRTVGLFAIDEAHC
VSQWGHDFREEYAQLNVLKKLCPDVPVLALTASATPTVLDDISKHLKLQK
PERMVHGFYRSNLYYQVELCEDEDAKLLLLLQSIKQTPEGRIIVYCGTRK
VTESIAAFLQKKFGKSVGYYHAGLTSEVRTSTQEAYAKGELRILVATNAF
GMGIDQPDVRLVVHFQIPANIDALYQEMGRAGRDGEHSTCLTLYSKKDKG
LQSFFIHSSEAPDEIKDARWRNLDALVNYSEGGECRHAEILTYYKDSQRI
ERCGHCDSCDPKSARRIQKSVTPLAKVDQVVTKLKKASSKSKKIINTDDI
VLDEMQEKRMEVLKRWRREKAKELDVPAFVVFGDLTLRQLAVKNPRTLDE
MKNIYGIGDSKLEKFGWDVLAELGDPARRL
>Bd0988 recQ, ATP-dependent DNA helicase RecQ
MTDLLQLLKANFPFTSFRGEQEQVLHKVWANQNLLALMPTGMGKSLCFQF
PAKTREGLVVVISPLIALMQDQVFKAQELGISATFLSSTLSRDERESRQN
RLAKGDFKLIYVTPERFRKPEFLQAIEKRAIQLLAVDEAHCISQWGHDFR
PDYSRVGEFRALLGNPPTLALTATATPEVQKDILKKLNMEDALIISAGIE
RPNLALNVHDIYGIDEKIRAIVGLRHLTPGTAIIYCSLIQTLKKVSSALN
RLGMAHLVYHGDLPPQDRKRNQKAFQTEEAPLMIATPAFGLGIDKSNVRL
LIHAETPNSLESYFQEVGRAGRDGAESSCHLLYDQDDVSIQMEFLKWSHP
EPDFIRKIYQLIEDKRMQVDQGGFDFLREQMNFRNRRDFRSEAAVSILER
WGCLQKSDDPFPFACVQAPTDEQFLAENDEAILRAQNTKLLQMVQWANQD
SECRMNRIYAYFGHEHTEPCGKCDICKR
>Bd3733 recR, DNA repair and genetic recombination protein
MLHISALEKLVHELSRLPGIGPKTAQRLAYYILRTGNEYPERLSEALLRV
KAEVHDCPTCFNYTDTDICRYCEDSHRSDESICVVEEPSDIMRIESSGAF
RGRYHVLHGAISPLEGIGPKELKIKELIDRVEDGLSGTGPAIKEIILALD
ADLEGDTTILYLAKQLQGKGLKLSRIAHGVPIGSDIDFVDDRTMGRALQN
RVEL
>Bd3461 rhlB, ATP-dependent RNA helicase
MKFSELNLDSQLLSAIQKLNYDDCTPIQEQAIPPVLDGKDVAGLAQTGTG
KTAAFVIPVMERILRARPIQGEVTEEQKALIEKRAYKDWKPQNFVLILVP
TRELAEQVQDNINKLSVDSGLRGFAIYGGTGYDKQKEALKNGVEFIVATP
GRLIDLYKEHLVDLKQVRAIVFDEADRMFDMGFKDDMKYILQRVPRERQL
LVFSATLNFDVLNTIYQFGSEPVEINISRDQAKADNVKDQIFHVGSDEKP
QHLLSLLKVHNPKQAIIFTNFKMSVERIAKFLVENGVPAMAISSLLTQAQ
RNRVIEQFKAENDMNVLVATDVAARGLDIKGVDMVVNYELPMDSESYVHR
IGRTGRAGTTGQAFSLVGDKDIESLGRIEDYLKHKIEIGYLENDQLLKDF
KPMTSSYDGHYPKSLDRARAPREGGRGGDRGPRREGDRGPRRERGDRGPR
QDRGPRPEGQQKSAQGAGAQQTQGGGQRPDSRPRRQEGGPKRPHDAKRGE
QRQPRNDQARKPHGQQQPRQGASAKKRVPMAAQKSIGQKVAGFFKRLFS
>Bd0235 rhlE, ATP-dependent RNA helicase
MTTTKFTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQT
GTGKTAAFSLPILQNLSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAY
SKHLNMKHAVIFGGVGQNPQVRALQGGVDILIATPGRLMDLHGQKHLKLD
RVEIFVLDEADRMLDMGFMQDIKKILPLLPQKRHNLFFSATMPHEIQTLA
NRILVNPKKVEVTPVSSTAEKVEQRVMFVDKPQKLDLLLHILKDESLSKV
LVFVQMKYGANRVVDRLTKAGVAAAGIHGDKSQNQRQRALEEFKNGDVRV
LVATDIAARGIDIDGITHVINLELPHIPESYVHRIGRTARAGATGISISF
CTAEERSFLFAIEKTTRTKVTVVEDHPFHSTEIANAPVMTVGKAKAILEG
QRLQNKAKNRGGGPRRQGGGAPQGGHGGKKAGGKPQGGNKPDHGGKTHTK
SEHKSEGAASHKTHSKPAHAKPAHKPAHKSEGKSAGKSEHAPKKRSFWSR
LRNKD
>Bd0316 rhlE, ATP-dependent RNA helicase
MGEGSKPLFFVSFQRVVVHLPAMKLHNSPVRAHTFQEMNLAPVLLPALTK
MKISKPTPVQSQAIPASLDGSDIIAIAQTGSGKTLAFALSLLTTLQKKPE
ARGLILVPSREMAQQIYKVFLELCAEMPVSVCLAIGGTTGSKQANQLKKN
PRLIIATPGRMNDHLSGNKLLLQNVEVIVLDEADRMLDMGFAPQLRTIQS
TLRGPRQTMMFSASFGSNVESIAQLFMKPDVVMVRSEKAEAPVESLKQKV
LFLDRSMKNDRLLDELNATRGGVIVFTGNQENCEAVGNYLKEYGFSTDLI
HGGLSQGQRNRVVRGFREGEIRIVVATDLLARGLDVPHVDHVVNFDLPFQ
SEDFLHRIGRTARAGRGGEAITFVTPSDTRMYAKIKGYLQGAQEIKVDPT
FAFIDRSKKFDKNKPAKGNEPARRNAPGKPQAVKKAAPAGKPKSKGGKIN
PFAGKTVAPKKSGAKKSGFAKRK
>Bd0324 rhlE, putative ATP-dependent RNA helicase
MKFEKFHLSEDLLRNLTDNGFFRTTDIQYKAIPSILKGEDVLAIAQTGTG
KTAAFAIPIINMIHTEKSSKRAIGIKCLILVPTRELAQQIGEVFNKLSKH
TKVKPFALFGGVEQDAQIQKLQDGIDILISTPGRMFDLIAQGHVDISRIE
TLVLDEADHMLDLGFIDDITSVKRKLTKRHQTLFFSATINPEIKKLAFSQ
VRSSAIRIQISPEDPVSKNITHFVMHVEMDDKRFFLAEYLRQNPDGKFII
FVRTRVRAERVAKALARVEVQSLTLHGEKDQTDRAEVMKTFRKGDCKILI
ATDLSARGIDIPDVTHVINYDLPEKPENYVHRIGRTGRGFNKGVAVSFCS
TEEKPLLAEVESLITKKIEVLKVSKQDYKAIVETQDLSLDASLQELLNSE
DNYKKASKRKKK
>Bd3131 rnhA, ribonuclease H
MTEKPRLVRMLGVSTNTRDHIMIYSDGACSGNPGPGGWGSVILYPDNQVQ
ELGDGEKSTTNNRMEMTAALEALKAVAHMKVPVRFYTDSTYLIRGITQWV
HGWRRRGWKTAEGGEVSNQDIWEDLSHVVAARGTQGKIEWHYSRGHVGIP
GNERCDRIAVAFSKNDYVSLYSGSLDQYPYDLLQVPADTSLPEMKGPGEK
KKEAFSYLSNLGGLVYRHRTWPACQKRVSGQSGAKFKKATSAAEEIEILK
SWGLSPSTVIKEG
>Bd2138 rnhA, 
MQSLFLKVRSFFLPRFEVYTDGSVKNGRGAWAYVVVRRNRVLREASGVQT
RPTSNQMEFQAAIEALSSLPEKSRIVLYTDSRVLIETLQKVPEWKGLGWV
KSRGQPIPQVNQLKQLDQLLTVRKVQWKWVKAHSGIKHNERCDVLCVRAR
SGS
>Bd2116 rnhB, ribonuclease HII (RNase HII)
MLFPSIIAGLKHRGIRMAKKEKIEFPKIEWRDFSPAPIIGVDEVGRGCLA
GPVYAAAVIFKSDALNDLVTDSKLLSEKRREELADLILKEHIVGIGSASV
EEIDEINILNASLLAMKRAVEKLGVKSGHVLVDGNKKIPNLKGFEQSTIV
KGDLRVAPISAASIVAKVTRDRLMKDLGVKYPHYGFEIHKGYSTPVHKQS
IVDHGPCIAHRRSFAGVKEYV
>Bd2488 ruvA, Holliday junction DNA helicase RuvA
MIGYLRGKIIEVMNDSALIDVSGVGYEIHASSNTLGDLQALLGNDIIVWI
HTHVREDALQLFGFHDKEEKNLFLSLLKVNGVGPKMALSILSGGRPAQIH
EMIEAGNAKALSGLPKVGKKTAEQIILTLKGKLVSIEEGGVVAKAKSVAH
TQITSALLNLGYKSQLVDQFVSSLPADIAVEDGIRKGFQTLSGGLS
>Bd2487 ruvB, Holliday junction DNA helicase RuvB
MSRILEGDPVEGEKSWENELRPQKFEDFPGQDDVKEKLKVFVAAAKHRGE
SLDHVLLCGPPGLGKTTLSKIIANDMGAEIKMTSAPAIDKKGDLAAILTS
LKPHSVLFIDEIHRLSRHVEEYLYTAMEDYYIDIVTGEGLGARSMKFTLA
PFTLVGATTRAGLLNPPFRDRFGIVERLQFYDKDALRQILMRSAEILKVE
IDEEGAEEVARRSRGTPRVANRLLKRVRDYAQVKGNGVVSKDIAVYALNQ
LGVDQYGLDLMDRRILSLIQDKYAGGPVGIDTIAAALSEERDTLEEVYEP
FLIQEGFIQKTQRGRVITEFAKSSVLADK
>Bd2489 ruvC, crossover junction endodeoxyribonuclease RuvC
MSLVILGVDPGSRITGFGVVRVANGKIEHINHGVIVMDGDDAFPRRMTEL
GSAFREVMEKYKPEQVVIEKIFLGKNADSAFKLGHARGVIMYEAGLGGAE
VQEYATRSVKKGVTGNGGASKEDVQAILKVMLSLKTISRIDASDALAMAC
YHAFEMKKKALMQRAVSL
>Bd2472 smf, putative DNA processing protein (Smf family)
MNDLYSISQILKSHPLYAVERDGIHALFLELAREGRLSADQVLTGLRFRW
PELGEAMTKNHELFKKHCEESLQLKMQGVNFVVYGEVLYPELCYQMADPP
LTLSYRGSPAWLNARTLSVVGSREPAADSLLWMEKELGLFCEQQRPCIVS
GGARGVDQKAHSVALRKFCPTVVVLPSGLGEIYPANLKEWMGLVIEQGGC
FLSEYDHQQKMHKHLFHHRNRLIAALGRASLLVEARRRSGTLITAHQAAQ
IGRPVWVVPGHPLDPHFQGALDLLMDGAQSVRDAQDLLMFFQSETAGEQI
SPAGVGALCEPQHYL
>Bd1582 ssb, single-strand binding protein
MSGVNKVILVGRLGADPEVKAIGSGSTVARLNLATSESWVKDGQRQERTE
WHRITVWGKLAEICGKHLSKGRQVYVEGKLQTRQWEDQQGQKRYTTEIVA
STVQFLGAAGGEKSSGNSMGNDDFNFQDFGPEPSFNSNDEIPF
>Bd1042 tatD, TatD related DNase
MEWIDIHAHLNMLEEGVEAAINNAKAVGVKKIITIGTQPEDHPIVLDIAR
KYYPEVYCTLGVHPHDGGTYTEAAGKFIEEHVTEPCVVAVGEIGLDYYYD
NSPRELQKEAFRAQLEIARRTKMPVEIHTRDAEEDTIEILKEFKGEVNGL
IHCFTGTEWLARQALDVGFNISISGVVTFKSADSLRETVKMLPLDRIHVE
TDSPFLAPIPMRGRKNTPAYVIHTAKFVADLKGISLEQLCEQTRINALKM
FPKIQW
>Bd2864 top6A, 
MAKLLSIRDLKIDIPKEARILADKMLKDLESSKRPVLEAVKTSLDNSLYN
AKVGYLTPGDKVVRTELNVSSVQKLARVVFLLEMLLRNLETGTVNTKREL
YYMCKGEIKGNPRLKPLDFDDQPESDAIIDFIGDMLEVYREELNVFANDR
GGQTYSQQLVVTETLTDGDKAVIDLSTLGTSPFQPKNKPQALKLKAKKKI
DFCLIVESEGTANTLVTMGFTKRNNCIVMGAQGVPSNGVRGWAKLIQEEL
DVPMYFFGDLDAYTMQNIFRTLKAGSAASLIRNADFSAPNVKFLGVLPED
VKKYDLPHYKVKESDPAEARALKKAKDALENDPFFLDKKNKNLADILRWL
IKEKIRCEQQSFFSVDPKDPIKTEKLILEKIKRGSYV
>Bd2865 top6B, type II DNA topoisomerase VI, subunit B
MSKITKSSTAEYFAKNLQQVGFSSPLKAVLTTLKEAVDNSLDACESAGIL
PDLLVEISKVGAGSTKNTDLIRIVVEDNGPGIEGEDLAKVYGEYLASSKF
GRGQCSRGQQGIGISAATTWAQMTNARGVSVVSKTKKMRKAISAQVDVDI
KSNTGVLKNKETLDWDREHGTRVEFVLDGRIQLNGDGGLLTYIEGTILVN
PHMTITYKLTDADFVTVTRVSTDVPKVPEASLPHPHTFKLGEFITHSTLF
GKTTLSKFLKTGFSRISDQSISDFVKKGLPKGLLEKPLTALSEEDFKKVF
QAVQNTDLMAPSTKSVLTVGEEALSKSITRLGEIDFFAVVTRKPTICDFK
PVVVEVALARFKDRNQQNDSPVTLLRFANRVPLQFDKSGCAITWAIESVN
WKAYGLGQPKDSLPLGPYIFAVSIVSPFIKFKNASKETIDASEELVAEIR
LALIQAGQKLSRHIKKEVKEADLERKLAHIEQFGPILVEGLARIINAPES
RKKRAEEGLKKLLGRDSEDAMADLEAAESKLLEQKKRDKKKGIAHGDEEE
IDVISSSDLVEEASEVPQGTKKTTTKKTVTTKKTTGKKA
>Bd0964 topA, DNA topoisomerase I
MAKKSDATDGIKLVIVESPTKAKTIRKFLGRDYVVESCMGHIRDLPQSAK
DIPEKVKKEKWAQLGVNVDKNFEPLYCVPKDKTKVVKNLKDKLEEASELY
LATDEDREGESISWHLLEVLKPKVPTKRMVFHEITKDAIQKALKDTREID
FNLVRAQEARRVLDRLVGYTISPLLWKKVAYGLSAGRVQSVAVRLIVERE
LERVRFKKSSYWGVLAELSKDGVSFESRLQQYKNQRVATGKDFDGLTGQL
TAGKDVLVLDEKTAGKLSMDLKSGNWQVTDVEEKPTFRKPAPPFITSTLQ
QESNRKLGLSSRETMQVAQKLYEQGFITYMRTDSTFLSNEAITASRDCIE
SKYGKEYLTPQPRNYAAKKVKGAQEAHEAIRPAGNQFMDPDETGLTGTQF
RLYDLIWKRTIASQMVDARQKQVSAKITVGDALFGASGMTIEFPGFLRAY
VEGSDDPEADLAEREVRLPALKVKDGVKCAKLDPTSHETKPPARYTEASL
VQTMEKEGIGRPSTYASVIGTIIDRGYVRKNGTALVPTFTAMIVSKLLSQ
YLSQYVDLGFTSEMEQSLDNIADGELDWESYLASVYKGPKGLRAMVDNQG
DKIDPNEARTMTLEGMDKYKFHVGRYGAYVTTQRDGEDVSASLPDNESPA
DITPEIAEKLIDQKINGADSLGNDPETDLPVYVLNGRYGPYVQLGDVTPE
DDKPKRASLPPGTQPEQVDLAMALSLLQLPKTLGTHPGTGKDIKAGLGRF
GPFVVHDGDYRSIPKGESIFNITFEKAMEMLAQPKKGRGRAAPLKELGAH
PDSGDAIQVFNGPYGPYIKCGKVNASLPEGATPDTVTLEQAVALINEKGP
AKGKGKAKGKAKAAPKAKAAKADGEKPAAKKPALKKAANAKEKAEALGVK
KVVTRKSKK
>Bd2442 uvrA, excinuclease ABC subunit A
MSHAEDGIVVKGAKEHNLKNVSVTIPRNKITVFTGLSGSGKSSLAFDTVY
AEGQRRYVESLSAYARNFLEQLKKPEVDSITGLSPAIAIDQKSVSTNPRS
TVGTVTEIYDYLRLLFAKLGIPECPTHHIPVSSQTPQQIIEEVFKKGVGT
KFFVLAPMASGKKGEFLAEFQRWAKKGFVKAKVDGKMIELDKATKLAKTK
THDIDLVVDQLILKDTLKLRLSESINTALSMANGRVIIETLDGERTSYSL
HSACPECGYSFPEIEPRLFSFNNPRGACPTCHGLGTIDLEEEEQFSDGEV
GGKKLDKVVYKYKGKKTSDDDDEEGEEMVLNDCPDCHGARLKNEALNIRL
GGKTIAELSDLGALELRDWVAKLQWKAKDQLIAEKIVKQILARLDYLIRV
GTGYLSLSRPSRTLSGGEAQRIRLATQVGSSLIGCLYVMDEPSIGLHPRD
HHRLLDIIGELKERGNTILLVEHDEDTIRYADFVVDLGPRAGVLGGEMMA
QGTPDELAANPNSLTGKYLNGEMRIPIPKERRKGNGQFVRLTGATGNNLQ
NVDLEIPLGTFTTVTGVSGSGKSTLIIDTLYKILAQHFYKALAQPSPYKK
IEGLDKIDKVIDINQRPIGRTPRSTPATYVGLFPMIRDLFANLPDSKLRG
YEPGRFSFNVKGGRCETCMGHGQIRMEMHFLSDVFVTCDTCLGRRYNRET
LNIKYKSKSIADVLEMSVGEALEFFRNHTQIYRKLETLHRVGLDYMTLGQ
SSTTLSGGEAQRVKLSKELSRRGTGKTLYILDEPTTGLHFDDVRKLVELI
QELADQGNTVLVIEHNMEVVKSSDHVIDLGPDGGKGGGQIVAAGTPEKVA
KVAASETGKFLKPLLK
>Bd0159 uvrA, excinuclease ABC subunit A
MKDIHLWGVKQNNLKNIEVKIPVGSMTVICGPSGSGKSSLAFETLFAEGQ
RRFIESMSNYARQFLNKAPKPDIEGINNIPPAISIEQKNTVKSSRSTVGT
TTEIIDYLRLLYEKIGKSYCPTHHCPTEKESVTEATDKVLKNFAGKRGYL
LVEINSEGRVAEGKKLHSLLLQDGYLRIYIPKVTEVKKPAAKAAGKKTKA
SGKKASKKVETPEIVATHPGGLTNEEMGTVVEIGEAAAIKKGLPKETFYL
VIDRMSFNEDERGRLADSLTQAYEASIKYNTHLITRRATILSTDGERLQV
SEEASCPVCGYTPPPLSSKLFSFNSPIGACPTCKGFGNILDIDEEKVIPN
PNLSLAQGALSPFWMPSAAHEKKQLLAYCKKTKIDTHTPWKDLPKAERDV
IWNGNKDFFGVRGLFEYLDQIKYKMHVRVFISRFRSPFQCPTCKGARLRT
EANHVLIANSNINDLSNLTIEDLNTFFQKLEVTPFQQEVAGEVLKQIRSR
LEFLMRVGVHYLSLGRETRTLSGGEYQRLILANQLGMGLSQALYVLDEPT
VGLHPRDNDRLISILKDLKDLGNTLVIVEHDHDVIKASEHIIEMGPGSGY
LGGEVVYSGTTEKFYDYEKSNTVPFLKPSKNWQALRTIRPVDVDNYKVKI
ELKGAKGHNLKNLDVTFPLNRLVTVTGVSGSGKSTLISKTLYPALARALD
IEYMPAQDYSGLDGVEHIKNVLLIDQSPIGKSARSSPITYLKAFDAIRMI
MSTTPESQSRGYTAGTFSLNVDGGRCPACKGTGYEEIDMMFMDNVVIPCD
VCDGKKYRPEILEIQYKNKNIHEILSMTVNEAMNFFVAHPNIRKPLSVLK
EVGLDYLQLGQPANSLSGGESQRLKIAKELSQVQQKSTLYILDEPTTGLH
FREVELLMKVLNKLIETGGSVVVVEHNLDVIRGSDYVIDLGPEAGKKGGN
IVATGTPDDIMKVKKSLTGQYLKRYIESHQTS
>Bd2312 uvrB, excinuclease ABC subunit B
MKNTRRLRLSVFIPQLSAGSGGEARKPLIATSHITQSRAKKWRVLFYDRA
ILGGMASAYKKNFQLVSEFKPSGDQPKAIEQIAENFNAGLKHQTLLGVTG
SGKTFTMAHTIANLNQPALVLAPNKTLAAQLYAEFKELFPHNAVEYFVSY
YDYYQPEAYIPSTDTYIEKDSAINEQIDRMRHSATRSLFDRRDVIIVSSV
SCIYGLGSPEAYEGMMIQIVSNTSMKRDHLLRELIRIQYQRNNVDFSRGT
VRVRGDNVEIFPPYEEERAVRVEFFGDYIERLSWIDPLTGQILEELDQIG
IYPGSHHVTSDDSLKRAIKTIQDELRDRLVQLNQEMKLLEAQRLEQRTYY
DIEMMEQMGFCQGIENYSRHMTGRGPGEPPPTLLEYFPKDFVTFIDESHV
TVPQIGGMYRGDRARKMNLVEHGFRLPSALDNRPLNFQEFEAMMDKVVYV
SATPGTYELQKSEGVIVEQIIRPTGLIDPIVEVRPVKHQVDDLLKEIRIR
VSKQERVLITTLTKRSAEDLTEYYENLGIKVKYLHSEIDTMERMEILRDL
RLGVFDVLVGINLLREGLDIPEVSLVGITDADKEGFLRSERSLVQTIGRA
ARNLNGRVILYGDTVTESMEKAINETERRRRIQSEYNEAHGITPQSVKKR
IRDGLGEMFDGTVSTPLGGENKSAAIMQKFAQQPEKIQQEITKLRARMKE
LSANLEFEEAAKIRDEIKRLQIVELNVRSGEIEQESAEVVKDGLK
>Bd2311 uvrC, excinuclease ABC subunit C
MASSKFEEVRDKVKEFPTQSGVYLMKNTADKIIYIGKAKNLRNRVRSYFN
DSKDHSPKTRLLVSNICEVEYILTKTEVEAFLLEASLIKKHRPKYNIRLR
DDKAYPYIRFSWGDQAPRLYLARKVKKDGSLYFGPYTSGLAVHGTIKFLN
RTFKIRDCTDAVFKSRTRPCMTYQIGRCTAPCVKYITMEDYRNEVEGAKL
FLKGQNKKVIKSMTEKMMGAADEEKFEVAARLRDSIEAIKAILQKQAVIN
DTSEKDQDALGYYGDERGCLIETVHIRAGRVIGTRPHYLPHFDPNDAVED
PREWLVDFLNQYYEDNFIPDEVLLPLDIGNDLTKLMEEVLKERSGSKTTV
RFATDERGRNLVDMAHENAKSHFLKYVSKSEEKLRGLEEIKERFNLPERP
RRIECYDISTFQGAETVASQVVFEDGVPAKEHYRRYKIKTVQGINDFASM
YEVLSRRFKHTEYDDPQLIVIDGGKGQLSQAMKILEEIGRKDIPVVGLAK
ARTESDFQKQEVESTEERFFLPGRSNPVIFKHNAEALYILSGIRDEAHRF
AITYHRKLREGTSLESELDYVVGLGEKRKKVLLTQFNSIDEIKMADPEEI
AKLKGFNRVLAERILLQLNESEEEETEVEE
>Bd0254 uvrC, excinuclease ABC subunit C
MDLQTTGAKPGAADILEVAWSLSGHSEVHSVLSAQAEDRPVPRRILALTG
IASEELESATPLSDIFDRLYQDIQDRPAVIHFAQFERPFLTAAFETFKRS
EFPIICTHEIAKRLFPNLPARGIKGLAGYFGHSSGEFKRGASHVEATKII
WQHLVKELEAKGILTFVDMQTWLSTEAPKKRTKYEYPMAKEKRLNLPKVP
GVYRYVSQWGEILYVGKATSLHDRVNSYFRGQKGRDSFKLEMLTQAYDLI
VTECRTPLESALLETDEIKKYNPRYNISLKAGERGLVFFSHDFTSMSPEQ
DDQHSIGPFTNALVFDSILKLNESLLSEDQTFNPEMFFEPLDADLLKSGF
ALFCERLGKSPDVFKSLRSIFAQGLVFVKNAPDEEEDTELAMEEESETSV
AASDTAEDIEIELTAEDIADKFERHFKRAAQAYLRARRMTKLLNCDIEYS
LSAKGKKFQLYLRGGHPINEPAPQERSTWSGHSVETYDRMAVLLTELERV
RSKKGQVSIRF
>Bd2025 xer, probable bacteriophage integrase or recombinase
MATAPRYQLNKNKYLLAPESERLRKILTDFQDKDPRNCLMIWTALRTGAR
AQEVLNIQRADLNPYDESIFIRGLKGSNDREIPVHSDLFSRLHRFAESQG
GTSVFPISYNRLYQVWEMYRPVPKKFHALRHTFAIELYQKTKDLRLVQVA
LGHRNITNTMVYADYVYSQQELRKLIL
>Bd3064 xerD, site-specific recombinase
MAKAFKLSENIDKYLKYMTFIKSASPLTIKHYSLDLMQAFNYEDPSVKAK
SISESELLSTARAAFNQWAHLSLASRNRKAATLKSFFSWAFEESLTEKDL
SVQITCPKVPKKLPHFVSVDEALSVLKSFDSETKIPLKEKVLFLLLYGGG
LRVSEACNLKWSEVQTSQKVLRVKGKGSKERVVALPSLTVEVLLKWKKES
SFDEYVFGEKPLNSRTAYEMVRQSGIRAGLLKPLHPHALRHSFATHLLSS
GANLRTLQELLGHESLQATEKYTHLGIDQLARTMENLHPLGKGK
>Bd2300 xerD, integrase/recombinase XerD
MELPLWIDFFDELQNVRGRSQNTVMAYRRDLELYLEYRKTGKTVPGFYEF
MKKNKLSTRSQARVISSLRTYFKFCETRGMKCPELRELRPPKVKVGLPKV
LTPQEFQQLFDAAEVPDAVKTARNQLTLLFLYGLGCRVSELIGLNVVDFN
QTDRWIKVLGKGNKERLVPLTEKLAENLTVYLKEHRMALVKENSPSILIN
DRGHRPSRVDVWRWLAAWSARAGFAEPVNPHRFRHGCATALLESGADLRS
IQMLLGHASIQTTQIYTNVTTNTMTKTIEEHHPLSQMVDADK
>Bd0197 xseA, exodeoxyribonuclease VII, large subunit
MSDSPNQPLRKTDVSAQASLGAADLLTKNNEPSVLSVEQLNIYVKQLLEG
QIGQVWVKGEISNFKAHTSGHFYFSLKDSRSQITAVMFRGNNARLKFKPT
DGMEVIVRGRITVYEPRGNYQLMCEMMEPVGAGALQKAFEQLKMKLKAEG
LFESARKKPIPTFPRHIAIVTSPTGAAIRDILNVLSRRAKAIQVTVVPTI
VQGEAAAPQICEAFKKATALPGVDVVIVGRGGGSIEDMWCFNDERLARLI
AASPVPVISAVGHEIDFTIADFVADLRAPTPSAAAELVAKSSGELANKVV
SLERMLHLTFEKKMKFLREKMLGLSKRLVDPKRRLQDLELRNDDLLNRLE
FAINRRLAERRHRVELMSQKLGSPQDLIDEKKKDLEYLKARSEKALHFSI
ERKKARMGKVMAMLDSLSPLKVVERGYSIVTKNSEVIKSASQVKKGDLLD
IRLAQGSVTAIVDGVKEE
>Bd0198 xseB, exodeoxyribonuclease VII, small subunit
MDFEKKLGRLEEIVQKMEKGDLALEESLKLFEEGVKLSRECHQRLNEAES
KVKLLMSVGADGQPVTTDFTSEEN
>Bd3645 ybaZ, putative methylated-DNA methyltransferase
MSEVFSEKVLKLIKKIPEGKVATYGQIAALAGKPQGSRAVAWLLHSCSES
HKLPWQRVLNSKGKISFPAGTKLYRQQKKLLVSEGVEFGDGDMIDMSVFQ
WKKKVMPVKRASQKPRMFS
>Bd3681 yejH, putative ATP-dependent helicase
MYRLRDYQQQAVTNTIRYFQKKREPAVIVLPTGAGKSLVIAELARIARGR
ILVLAHVKELVEQNHDKYRSYGLEAGIFSASLGKKDHDQKAIFGSVQSVA
RAPDEFFNNFSLLIIDECHRVAEEGATQYQEVVKKLQDRNPTLCVLGLTA
TPYRMGLGWIYEYNQGGELKTEQSRFFKQCVYELPLSYMIRHGYLTIPVK
VDIPVTCYDFSDLLGKDRAFTTAEVEEVLKNQKRLTPLIINNIIDITEKY
DRQGVMIFASTIKHAEEIMTYLPTDQARVVFGDTDIKERAQIIHDFKQKK
FKYLVNVSVLTTGFDAPHVDVIAILRPTESNSLYQQIVGRGLRLSEDKKD
CYVLDYTGVGHDIYAPEISDKRPAKDTVPVKVACPKCAFENDFWGYADDD
GVVFEHFGRKCKGASQDPNTLEIKPCGFRFRFKLCHNCSCENDITAKACE
KCDAVLIDAEAKLKQAKLSKNAHVMTPDRISFEERKDKNSNPYLEIRYYD
LESNYLSEVHFFNNTTAVKKFNINFLRSHLRLPELAVDLTSPQEVIRFQK
LFRSPIFVIARKQDKFWRVTEKVFAEELAP