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2024-05-04 08:11:08

Gene list

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COG category: Replication, recombination and repair
Organism: Prochlorococcus marinus str. MIT 9313, MIT9313

Number of genes found: 99

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Prochlorococcus marinus str. MIT 9313, MIT9313
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PMT2071 conserved hypothetical proteinchromosome CDS2179015 786 + 0.512723
NA PMT0830 conserved hypothetical proteinchromosome CDS906943 795 - 0.525786
NA PMT1808 possible Methylpurine-DNA glycosylase (MPG)chromosome CDS1908794 708 - 0.564972
NA PMT0302 conserved hypothetical proteinchromosome CDS345348 3993 - 0.440771
NA PMT0297 Staphylococcus nuclease (SNase) homologueschromosome CDS339767 585 - 0.507692
NA PMT1168 Helicase C-terminal domainchromosome CDS1260075 1317 + 0.566439
NA PMT0294 Site-specific recombinasechromosome CDS333292 636 - 0.493711
NA PMT0641 CHC2 zinc finger:Toprim domainchromosome CDS692462 2055 - 0.540633
NA PMT1885 NUDIX hydrolasechromosome CDS1989891 576 - 0.548611
NA PMT2127 possible Pancreatic hormone peptidechromosome CDS2240593 1044 + 0.465517
NA PMT0880 Staphylococcus nuclease (SNase) homologueschromosome CDS964971 636 + 0.525157
NA PMT0775 Transcriptional-repair coupling factorchromosome CDS846450 3582 + 0.48297
NA PMT0211 Recombination protein O (RecO)chromosome CDS242124 804 - 0.606965
NA PMT0936 conserved hypothetical proteinchromosome CDS1018997 309 + 0.524272
NA PMT0960 conserved hypothetical proteinchromosome CDS1040973 480 - 0.510417
NA PMT0504 putative endonucleasechromosome CDS556147 624 + 0.43109
NA PMT1508 possible deoxyribonuclease, TatD familychromosome CDS1596835 834 - 0.543165
NA PMT2129 hypotheticalchromosome CDS2242503 291 - 0.477663
NA PMT1639 DEAD/DEAH box helicase:Helicase C-terminal domainchromosome CDS1740190 2496 + 0.561298
NA PMT0005 DNA gyrase/topoisomerase IV, subunit Achromosome CDS6115 2490 - 0.478313
NA PMT1319 possible secreted protein MPB70 precursorchromosome CDS1403994 1845 + 0.557724
NA PMT0837 possible DNA-3-methyladenine glycosylasechromosome CDS913690 444 - 0.513514
NA PMT0878 possible alkylated DNA repair proteinchromosome CDS962849 606 + 0.521452
NA PMT0234 Phage integrasechromosome CDS268946 1152 + 0.457465
NA PMT0866 probable DNA repair exonucleasechromosome CDS949255 1215 - 0.504527
NA PMT1301 conserved hypothetical proteinchromosome CDS1389921 525 - 0.533333
NA PMT1661 SMF familychromosome CDS1766788 1059 - 0.583569
NA PMT0778 Uracil-DNA glycosylasechromosome CDS852991 624 - 0.532051
NA PMT1395 Bacterial DNA-binding proteinchromosome CDS1481263 276 - 0.532609
NA PMT1241 phage integrase familychromosome CDS1329296 1164 + 0.539519
NA PMT1788 Ribonuclease HII and HIIIchromosome CDS1886298 657 - 0.585997
NA PMT1578 Putative RNA methylase family UPF0020chromosome CDS1677975 1125 + 0.562667
NA PMT2184 NAD-dependent DNA ligasechromosome CDS2309318 2091 + 0.548541
NA PMT1487 putative DNA helicasechromosome CDS1570495 2775 - 0.561081
NA PMT2158 SNF2 related domain:DEAD/DEAH box helicasechromosome CDS2279486 3300 + 0.57697
NA PMT0162 possible Bacterial regulatory proteins, crp fachromosome CDS185029 618 - 0.444984
NA PMT1609 possible DNA glycosylasechromosome CDS1710489 315 - 0.552381
NA PMT2126 Phage integrasechromosome CDS2239027 1530 + 0.504575
NA PMT0624 Uncharacterised protein family UPF0102chromosome CDS678229 381 - 0.503937
NA PMT0290 Phage integrasechromosome CDS329289 1269 + 0.469661
NA PMT0074 conserved hypothetical proteinchromosome CDS77441 1011 - 0.568744
NA PMT1583 conserved hypothetical proteinchromosome CDS1682823 357 + 0.563025
NA PMT0581 putative DNA helicasechromosome CDS637572 2541 - 0.541913
NA PMT1265 conserved hypothetical proteinchromosome CDS1354246 483 + 0.546584
NA PMT0135 probable adenine glycosylasechromosome CDS154524 1113 + 0.546271
NA PMT1083 putative ATP-dependent RNA helicasechromosome CDS1169058 1908 - 0.533543
NA PMT1107 conserved hypotheticalchromosome CDS1199183 1473 - 0.55465
NA PMT0526 conserved hypothetical proteinchromosome CDS575307 486 + 0.539095
NA PMT0957 conserved hypothetical proteinchromosome CDS1038579 480 - 0.510417
NA PMT0154 Eukaryotic protein kinase:Serine/Threonine protein kinasechromosome CDS172364 1890 + 0.555556
NA PMT1642 hypothetical proteinchromosome CDS1744383 333 + 0.45045
NA PMT1404 conserved hypothetical proteinchromosome CDS1490705 327 - 0.48318
NA PMT0037 SWI/SNF family helicase_2chromosome CDS38153 1629 + 0.539595
NA PMT0970 possible Herpesvirus VP23 like capsid proteinchromosome CDS1048734 291 - 0.460481
NA PMT0269 Methylated-DNA--protein-cysteinemethyltransferasechromosome CDS308441 402 + 0.542289
NA PMT1699 Site-specific recombinasechromosome CDS1799354 333 + 0.459459
NA PMT1725 conserved hypothetical proteinchromosome CDS1827937 1446 + 0.561549
NA PMT0865 RecF protein:ABC transporterchromosome CDS946491 2757 - 0.463547
NA PMT0833 conserved hypothetical proteinchromosome CDS909782 735 - 0.517007
NA PMT1129 conserved hypothetical proteinchromosome CDS1222192 645 + 0.534884
NA PMT0839 conserved hypothetical proteinchromosome CDS914700 531 - 0.508475
FPG PMT0186 Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase)chromosome CDS215736 876 - 0.52968
dnaA PMT1187 chromosomal replication initiator protein DnaAchromosome CDS1277265 1398 - 0.515021
dnaB PMT2176 DnaB helicase:RecA bacterial DNA recombination proteinchromosome CDS2302282 1419 + 0.562368
dnaE PMT0647 DNA polymerase III, alpha subunitchromosome CDS699452 3516 - 0.503697
dnaN PMT0001 DNA polymerase III, beta chainchromosome CDS174 1167 + 0.453299
dnaQ PMT0386 possible DNA polymerase III, epsilon subunitchromosome CDS434770 930 - 0.524731
dnaX PMT0059 DNA polymerase, gamma and tau subunitschromosome CDS59078 1821 - 0.556837
gyrA PMT1124 DNA gyrase/topoisomerase IV, subunit Achromosome CDS1215746 2628 - 0.533866
gyrB PMT0121 DNA gyrase, subunit Bchromosome CDS138528 1968 + 0.494411
holB PMT1989 DNA polymerase III, delta prime subunitchromosome CDS2102319 981 - 0.556575
mutS PMT1546 putative DNA mismatch repair protein MutS familychromosome CDS1636739 2487 - 0.581423
mutS,fdv PMT0079 putative DNA mismatch repair proteinchromosome CDS84051 2784 - 0.56717
mutT PMT1026 NUDIX hydrolasechromosome CDS1101923 426 - 0.525822
polA PMT1157 DNA polymerase Ichromosome CDS1246207 2961 + 0.555556
priA PMT1271 primosomal protein N' (replication factor Y)chromosome CDS1357251 2307 - 0.570004
recA PMT1727 RecA bacterial DNA recombination proteinchromosome CDS1829777 1140 - 0.548246
recB PMT1086 similar to UvrD/REP helicasechromosome CDS1173141 3825 - 0.520784
recC PMT1089 possible exodeoxyribonuclease V gamma chainchromosome CDS1179591 3312 - 0.561594
recD PMT1085 similar to UvrD/REP helicasechromosome CDS1171414 1731 - 0.533795
recF PMT1715 putative DNA repair and genetic recombination protein RecFchromosome CDS1817124 1098 + 0.566485
recJ PMT0761 Single-stranded DNA-specific exonucleasechromosome CDS830386 1899 + 0.508689
recN PMT2271 ABC transporter:DNA repair protein RecNchromosome CDS2405246 1683 - 0.607249
recQ PMT0189 ATP-dependent DNA helicasechromosome CDS218066 1485 + 0.598653
recR PMT1077 RecR proteinchromosome CDS1163056 570 - 0.529825
rnhA PMT2093 possible ribonuclease HIchromosome CDS2205905 774 + 0.560724
ruvA PMT0644 putative holliday junction DNA helicase RuvAchromosome CDS697936 678 + 0.551622
ruvB PMT0156 Holliday junction DNA helicase RuvBchromosome CDS174946 1059 + 0.576959
ruvC PMT1136 Crossover junction endodeoxyribonuclease RuvCchromosome CDS1227761 465 + 0.582796
ssb PMT0141 single-stranded DNA-binding proteinchromosome CDS160956 387 - 0.552972
topA PMT1353 Prokaryotic DNA topoisomerasechromosome CDS1436859 2751 - 0.554344
umuC PMT0638 putative UmuC proteinchromosome CDS689823 1275 + 0.557647
uvrA PMT2270 Excinuclease ABC, A subunit, ATP/GTP-binding site motif A (P-loop):ABC transporterchromosome CDS2402240 2961 - 0.54002
uvrB PMT0071 excinuclease ABC, subunit Bchromosome CDS72948 2040 + 0.468137
uvrC PMT0724 Excinuclease ABC subunit C (UvrC)chromosome CDS782299 2004 + 0.455589
uvrD PMT1917 UvrD/REP helicasechromosome CDS2022796 2409 - 0.534662
xseA PMT1641 Exonuclease VII, large subunitchromosome CDS1743229 1158 + 0.518135
xthA PMT1294 exodeoxyribonuclease IIIchromosome CDS1380858 840 + 0.528571
yrvN PMT1618 putative ATPase, AAA familychromosome CDS1719617 2208 + 0.564764