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# Prochlorococcus marinus subsp. pastoris str. CCMP1986, MED4

>PMM0939 CHC2 zinc finger:Toprim domain
MGPSIHPRTIQEVKDKADIVDVISEHIVLKKKGKEFVGICPFHDDSKPSM
TVSPAKQFYYCFSCGAGGNSIKFLMEFTRNNFTDVVLSLAKKNDINVINV
DGPQQEIYKKQLSRREELYKILRVTKEWFKSQLNNSLGKEAHHYLTSQRN
LNIKNINDFELGYAPNSWNDLFNYLSKVEKFPLKLILSAGLVVSKDNTDK
VYDRFRNRLIVPIFDMQGRVVAFGGRSLDGQEPKYLNSPETEVFEKGKML
FAFDKASSNIRKRDKAVVVEGYFDVISLHSKGITNSVASLGTALNKYQIS
QLCRCTDSKNIIINFDSDNAGRLATKRVINEVESLSLHDQINLKILEIKS
SKDPDEYLKENTPEDYFNLIDNASFWIDWEIDQIFDNKDLSKSDIFQNVI
SSLVKLLSKFPQSATRTHYLQKVSERLSMGQARLAIKFEEDLRKQVKGFR
WHGRSKKFEQPSEVSQREKNESEIIYYYLHCPEHRLFIREELLKREINIF
NTEYIRLVWESISTIEVNNLSANYLDDLKDPNNKQLNNEFTSINLISLLP
DHLALNDLEVSNKINTFINPDELFLTTLKNSKHNLLGTLSLLERYKSLKR
CRHLIESWGSQRLKTLENCISILIDNSSLEPTDSNKEIEDVFKDLNSDAI
KFQELYYLEREHINFLDKQRCGNFSSNQ
>PMM0451 possible Arenavirus glycoprotein
MFLKDHLKDTYQKASFDNNHLMLENIINIWAHRFGPESLNELFVKDQDQD
QLKLIEENQAEASQNQINLELIEDHQSEANQNQTNLELIEEHQSEVNQNQ
INLELLKNLQYEEKIEFKPKETKKSNNTEIINKDIYGSYKNESEFKDKEE
LPLPNIKNLRKWINNEKKAS
>PMM0802 putative endonuclease
MKKSERAEIILKELKELYPSPPIPLNHTNAFTLLVAVVLSAQSTDKKVNE
LTKELFKVADTPEKMKELGVSRIYEYIKQLGLSNQKSKNIYLLSKLIIEE
FHGQVPNSFEELESLPGVGHKTASVVMSQVFNIPSFPVDTHIHRLSQRWG
ITNGDNVRQTEKDLKNIFPISEWNTLHLQIIFYGREHCTARGCDGTKCLM
CRTLYPKRKKKFICKKP
>PMM0805 hypothetical
MYKSESIINNLLIEVDSLSYRITNIHQAYFNTSHVGLRDRLFYENKNISQ
RLNEIFSIAKVLKNRNNENISFSSLLVEKCKRTIDQKRIEKNLFFL
>PMM1417 Staphylococcus nuclease (SNase) homologues
MNKPGINFMRSLLVMFLIISFSSKAYSALPTTIIKSCYDGDTCTTIDGEK
IRLACIDTPELKGKKADPVAAREARDFLNNLVTNEEVSIRRITKDKYERT
VAELFKNDTNVQELIVDDSYGKIYERYAYQCNWTQ
>PMM0791 conserved hypothetical protein
MKYCKPKSKSILSLDVGLKRIGLAYCDSLFITVNILPALKRERNNNEIII
IKEHIKKHNLTGFIVGLPLDEAGGMTSQALDCKTYGEFLFNELKLPFSFV
NEHSSTWESTNRFGVKKDKSGLIDSLSAKIILEQWIQEGPELKELVGNKQ
I
>PMM1360 similar to DNA photolyase
MSLLLDAQEKWDDFLENKITNYEKLRSFDYGPTNKSSVSKLSPYISHRVL
LEYELLEEVKKKYRSQKINKFVEEIYWRIYWQGWMENRPKVWCNFISENN
YEYDIETYEKAINGNSELGFFNSWVNELKTYNYLHNHTRMWFASTWIFNL
GLPWQLGASFFFKHLYDGDAASNLLSWRWVAGLQTKGKQYRFSSANLRKF
SNNRFNVEKISNRQIFLEEKNQIPLDDEIYKSNMEQKSETLILFENDLHV
STLENTLRNYKSVFIILLSNDQRKIKLSEAVLSFKQQIVLEFIKQFDNVT
QIDPLKLKETLVNIDHLDMIYPGVGENNDFMNSFKKLNNKVIFNLVRDQD
LFAWKFAKKGFFKFKENIPKINQYVFQNY
>PMM0659 NAD-dependent DNA ligase N-terminus
MKTYLEERLEWYDHNYRIGNSLITDKQFDQLEKNLLRIDPDCDYFTNKKS
LPLPSLKKNSIDEFLEGLLPDTRLLIEPKIDGIAIALQYRDGTLEKSISR
KGIDVTNKIAEIQDIPLKLPVSGILQIRGELFTPNRSPNFSQRIASGFVR
AAAGSPEGISFCGFQIINGKLNQYETIQYLKKLGFNTPDIKSCNYTSQVQ
VFRKQWLDKKIFTEYPTDGIVVKINSRKLQLIREKSKIDYPHWQIAIKD
>PMM0005 DNA gyrase/topoisomerase IV, subunit A
MTKEKFTSISLQEEMQRSYLEYAMSVIIGRALPDARDGLKPVQRRILFAM
HELGLTPDRPFRKCARVVGDVLGKYHPHGDQAVYEALVRLVQDFSTKYPT
LDGHGNFGSVDNDPPAAMRYTETRLAPIAHECFLQEIGSETVSYSNNFDG
SQQEPDILPAQLPFLLLNGSSGIAVGMATNIPPHNLGEIVDGLIALINDK
EISDLRLSKIILGPDFPTGGELICNSAMNEVYLQGRGSVTVRGVIKNEEI
NLGKGRHKKNALIISELPYQISKAGWIEKLAELVNLGKIDGISDIRDESD
RDGMRVVIELKKDSNSEIVVSNLFKKTALQSNFGAIFLALVDGKPIQLTL
RKYLNYFLEFREETIRKRTKYFLRIASEKFEILEGFSIATKNIKDIIEVI
QNSENATEAKSILIVKLSLSEKQADAVLSMPLKKLTTLERKQIEIDMKEL
LEKKKYLNNLLNNRRLLLDTLIEELKSLKKKFNVKRKTKILKDINQEKEI
DTINNQILEDLINKETKISVDNRFYFKKIIYNNYKKILDHENKFIDNKNV
QKFICRIDKSLKIIGITSSGKIIQIDWKSNITSEFKMDKKVLGNIDPKEI
INFHYLDSKLKNYLCILSSDGRFKKVLFDEDMIKSNRIFSITKLKNSTSI
IDSFILNKQQQLVILTSIGRLFKFDLSDKNLNPSTKQSLGLLLVNLLPTE
QIVSCCKSKDKEILYLVSKKGKFFKLKIDDIYNSYNSKLGYVNEKMQLKD
DHFITVLSSNQYIDIETNKNKSARLNLNKLDNNSGKNMLKIDFLNLEKDE
YLDNCYRLEKYIN
>PMM1564 conserved hypothetical protein
MLEILSHQYLKRFIRSHDIDWDHIYSFGRIISKCLQTNETYLINSEIFST
NIWQPALLISIFLFEENSTFVLSQDKINFLKNNYLGELKRLGLNFILEND
QIIFSNHRVSFISLEKLLGDVNIFNARNHRIIFSGIENIKEDLKNYFRIS
FLKKNWFHNFEQASSKSQKIISTYNLLKKKFFLRKVLDSRSIFLDKEEIN
FLSNFFFENSSYSDQFLRVSNALSAGWACWVTLDDINFEWNFYLEPMDEL
SQIKHLLINNKFVFLSALREDNFFQKYLKKESLNIDLVMNFRSNFIENKI
LIYVPPRQMLPNNPMFTKNILDKSKKLIIFSKGLTLFLSDDVDLKLKFAT
ELASIYGKRVLLENIPLFNNEILCASYTWWINNSYCIQSPEQIIIPLLPI
PSIKEPINKLTISHNRNLSKDWFREFLLPEAIKKLERSISPLRKNAGKLI
ILDGRAHKRKWGRLILKSIQPSKQINYMLPYD
>PMM0234 possible Methylpurine-DNA glycosylase (MPG)
MIVETEAYSQEEEACHGYNKKTLSNKVLFGEPGRFYIYRSYGIHHCLNIV
TDKDNFASGVLIRAVFISNKNERLASGPGLVTKTFELDNKFNSLEILNNK
CLWISKGKSYLEKKDLIQTTRIGISKAKNIKWRWYLKRSRSISKREKGDR
NPNLKNSTNNLSGVT
>PMM1101 putative ATP-dependent RNA helicase
MASNKDNQLVEKNDDNLGVENISNNPSIQSEQKLEVTEDEISFKEEDLDN
GFACFGFNKLILNSLESKGYKTPTPIQKAAIPELMLGRDLLGQAQTGTGK
TAAFALPLIEKLENNKESNAKVLVMTPTRELATQVADSFKSYSAESTNLR
TLAIYGGTDFRNQISSLKRKTDIVVGTPGRIMDHIRQGTFKINNISCLVL
DEADEMLKMGFLEDIEWIIDKLPENKQMVLFSATMPNEIRNIAKKYLNEP
AEILIKSVKQETQLITQKYINVQRHHKLDALKRILEITNEGVIIFVRTKL
LTTSIAEALENSGHSVAVLNGDIPQNQRENTVDRLKKGFIDILVATDVAA
RGLDVERIKLVINYDFPFDKETYTHRIGRTGRAGRSGEAILFVNQREKHF
LRNLENSTRNKIEEIEIPNNKIINEKRMGKLITNLNESSLDQENNEEKKA
LMIDILDTLREKHSMEDSNIAMAAINLAIGNKSFFINEDESWLYRQNNSD
RNRSNRNGNNRMRNTNRRNNYQNDSFETYKFNFGKMDRVRVANIISSICT
STNINGRLIGKIQIFNEYSLVDLPRDLHGEVKNKLKNLRIRN
>PMM0398 possible Recombination protein O (RecO)
MSGESRIKGLCIKASPLGESGRLITVLTDEQGIIRLAAPGARRPKSSLAA
ATPLTYLSFQIFGKRSLKSVRQIKILKSYNGLGKNIECLAAAQAITELTF
LLVGNNDKQKDYLSSVLIHLDRIYEYNLESEEDFKMLSMSIQSLIHLLAI
GGINIPVNFCCKTGEAIIPPLGNWDWQCSYLPNEGFSTVEDERSILKVNA
SEIALLQRLLFAELPIKSNGELLGPKKVWLKILSIVENWISAQLEKELSS
LKMLREFYR
>PMM1321 Bacterial histone-like DNA-binding protein
MNKADLVNLVAARTELTKTDVSLVVDAAIETIVDSVVEGKKVSILGFGSF
EPRDRSARQGLNPKTGEKIAIPAKRVPTFSAGKLFKDRVQG
>PMM0286 NUDIX hydrolase
MGNKNFIKRSIFKEKISELKSKKFSFEINRIELPNGHEGEYGYIKHPGAA
LAVPITKDNKVIILRQYRFAVSRYLLEFPAGTLEIGETPINSIQREIQEE
TGFSANKWDELGTLVPAPGYADEEIYLFLARDLNKLNSEVKGDLDEDIEV
LILEPDELDNLISSGDEILDAKTVTAWFRAKQLLDKL
>PMM0254 conserved hypothetical protein
MFNIIKIRKLIKAIFFVSALINLSPSSKATQFFAIDSKNFSQSKSVNWVN
NVFPKNIDVSSKRPFPRSEYNYRSNAKNEILHPYKDGSPKLLANSFDNKN
ELEIQSEIQSEENNILKAKGNVLVLYRGNILKADSLIYDKTQKTVSAKGN
ISLSIGEQLFKMNRFQYDFNSKKGYLLDVKGLIKTDNLIDDLFSNVETSD
IKNSEISKEIFKEKVLNTPGALKNWILITDKIEIDGEKWKSEKAIFTNDL
IELKQVKIEINSLEAISRKDQLRFKSSLNYLILDEKISVPFWFGERTLTK
SGESFSFENRWNIGYDNVDKDGYFIGRKLNSINLFGDFFLDLEPQFLIQR
SLQGHTKSFISKGDSITADKVKRDAYWEDYFGFNSRIKGKISNWNLEIDK
QINSFDPDESSNSLRVKSNLSKEISFLNSIWDKSFFGVFRDRVWNGSLGE
SQVYIGYGSKLEKQNTWEVNGITKSETLSLGLGNFKGETLNSKNLVTSIK
GSLLYSSDQKIPLNGNKVLNKFIDSSFKYISEPINKGLSLNTSLKLFYAF
YKNGNNQQYLGFGAGPEFILGDLQKKYFDYTRISLLPFYKIKSGDSLFKF
DQIADEFTLDIAFDQQLFGPLILKSNASLNLDSDSKDYGDFINSKISLNW
KKRSYEFGIFYQPHNEAGGISFTLFGFE
>PMM1502 Ribonuclease HII and HIII
MKWIIQEEKEEDHLQILNKDSEIGIDEVGRGSVFGPVFSVAVVLSKKSGL
TLKKLGVNDSKKLTPKKRKDFFPKIIALSSDYALGQSSVREIDLLGIRHA
TELSMIRAVKKLKHMPSELLIDGPLTLRLWEGNQRNIISGDSKFISIATA
SIIAKVMRDSLMERLESKYPGYFIFKNKGYGTKQHFSSLKKHGLTNLHRK
SFLNKLNLI
>PMM0775 conserved hypothetical
MSEYRDSSSNNFLSLISGAFIGAAGLAWWLISEADKRKEEKKQKAMMYSS
RIQDGSEAIDTNENIKDVEGDKLEQKVEELNSAIADVRRQLEELGQ
>PMM0348 possible Spectrin repeat
MYSMFDLLFETPSYRPVYVISDTEMKELKKNHHQEELDEITTQRKRLEDA
FKSQLKHLEEREKEVKNELKLLSGTKGKA
>PMM0480 conserved hypothetical protein
MSRSLDLPSTEGVDTLAQELAKLQDNGKRRIAFLGSRHVPVVDIHLIELI
ARSLAEEGHTILTSGSQGVNAAVIRAVLGINPSLLTVLLPQSLDKQLPEI
KNQLESVIHLVEKSENDELPLPMASSLCNQEIINRCDQLICFAFHDSETL
LNSCRCAEEMGKVVSLLFFD
>PMM1486 possible deoxyribonuclease, TatD family
MNNIELIDSHCHLIFENFEEDLEEVVSRWRSIGVKKLLHACCELSEIPKL
KNISRRFDELYYSVGLHPLEANKWECNSKSIMKDAAQCDSRVVAIGELGL
DFFKSDNTNKQIDALVPQMHLACELDLPVIIHCREAANEMIKICHDLSKQ
GICPKGVLHCWSGTPDEMKQFLDLGFYISFSGIVTFPKAYEIHECARIVP
SDRYLIETDAPFLAPVPYRGKRNEPAFVESVAKSIASLRSSDLKSIADES
SRNAEDLFKFDLIN
>PMM0524 Phage integrase family
MNVIQEINNVNDKFATKGSKLRIEKRGETLNIRGSLPSKNDKNDFAVQRI
SLGLKADFNGLEEAKKKLQLITLQLELNQFDWINWVKISDKKEKKEEFKF
LTRLNDFEKYFFRENKNEYLTSTRKTTWRSSYKPYINRMISIQNDTKTDN
LDNIFTTTLKTYKEGSRSRKQCATSLSVLAKFLEHKLPEDWKLMAKGYGL
NKASFRNLPTDEIIENLWENIPNKSWKYVFGLMATYGLRNHEVFFCDLSS
LTNSGDKIIRVLPTTKTGEHQVWPFHPKWIDKFELCELGKDPELLPKINR
DLRVTTLQNIGKKITDQFKRYSLKIKPYDLRHAWAVRTIFYDLPDTVAAR
MMGHSVSLHTQTYHHWITKRDQQQAVNNALSKYKKREIF
>PMM0675 Uracil-DNA glycosylase
MKRLVISRGNVFANLLIIGEAPGALEDLEGEPYVGRSGKLLDELLIEAGI
DLQKDVYFCNVIKCRPPNNRKPTNKEINIHKPWLMQQIKLVDPKFIILTG
STAMRTILEIKNPISKTRGKWFKKGGREIITIFHPSYLLRFSSKDVEKPY
DLTLKDLKKVSSKLYAL
>PMM0839 Transcriptional-repair coupling factor
MSLNSLISYISNSQIIIELVKRIKHNNELNIIGSSRYAKSIIINSIANKE
NKDILLISPNEEIAYKWYGYFDSIDNRNVLYYPPSENLPYASINRSKETE
YSQLSVISKIIKKERKELNIIITTERSLQPHLIKINQFKENIFTLIKGNE
LDIKELTKKLVLLGYNKENLTSQEGSWSRRGEIIDIYPVNNELPVRIEYF
DNIIDKIREYDPVSQRTLDSVNKVEIVQVGFNLLIRKSLENLSEQGTFNS
EEITTKNNLDRYLGVIEEHPSNLLDYINKETLIVIDEKEECNKFSNNWCL
ESDNNFELHKDEIANNLKSNNINIKVKSNLHEKFESIIKTFSNYNVINLY
EFESKRNLDNRFLLSDKRINTSSKHIGKLSKEINKFILNKDKVWILSAQP
LRTKSLFFEHECNTTYLDKPNDLESAHKLIENSTPVIIKNKNNYEIEGFY
LPIWKVILITDKELFSQQALFNNVFIRKRKRSVNSNINVNKINPGDYIVH
KNHGIGQFLKIEKINITGESRDYLVIRYLDGKISVAADQLGSINRYRSSG
KIKPRINKLGGTEWLKIKDKNRKIIKKVALDILKLYAKREKLKGHIFPED
GPWQKELEESFPYQATPDQITAVKEVKIDMESDKPMDRLVCGDVGFGKTE
VAVRAIFKAITSGKQVILLAPTTILAQQHWRTFYNRFSPYPIKVSLLNRF
KTNTEKKDIYNGLKNNKIDLVVATHQILGKEIEIKNLGLLVIDEEQRFGV
RQKEKIKNIKTNIDVLTLSATPIPRTLYMSLSGLRQMSLLNTPPPSRRSI
KTYLSEIDMDVIRTAISQELDRGGQIFYVLPRISDIDQAVNKLKNMFKDL
KYIVAHGQMNEIDLENAMIAFNNGEVDLMICTTIIESGLDIPRVNTIVIE
DSHKFGLSQLYQLRGRVGRSGIQAHAWLFYPNINKINEASKQRLKAIKDF
SELGSGYQLAMKDMEIRGVGSLLGEEQSGKVNAIGYDLYIEMLHEAISEI
NGQEVPEVNDTQVDLPINAFIPGTWILNREEKLDAYKYATECTNHKELTE
LATDWTNRYGVLPKPVESLILLMKLKLLAKKCGFNKIKLKKPNVIIETRL
KNSTFKLIKKGLPSNIQSKFNYEEDDQFSKIIIRGLGVTDIQNQIDQLIY
WLGLFVKEINNFDKETSVTKI
>PMM1515 Site-specific recombinase
MFYKVFFSYVFDTVKNICIKTLTIKFKRKRFLLSEKNKKSKIIGYARAID
SEFDYLKEQIKCLKNEGCSLIFSEIVSLDEEIKPELRKAVNYLSKGDELV
VTKLDRAFSNRNECIKTIHKLLNNDVRLRTLSGFLSPKHSSDISLSVFNI
LYELDNLDNECLGERKKELISQRRLNGNNLGGRPKISPLKESLVMRLRNE
GCSYRSIRTQTGIALSTIRRIILDGEAS
>PMM1059 conserved hypothetical protein
MKTNLRLIGGRRLESSRNIDTRPTTLMVREAIFNILKNTVENSNWLDLFS
GTGAVSCEAYNHGAKKIVAIEKNKNNSKICLKNLHSLQNIDNRKNDIEVI
CKDVLIWTKPNTERNIFSSNDFNKIKFDFIFLDPPYRANYHELVLNQIFN
CNFIKKGTIVICEHSLDMDIKTNILWNIYDVRTYGQSKLTFLIHI
>PMM0053 Putative RNA methylase family UPF0020
MHVIASSPEGLEKYLASEIIELGGFNINTYKRSVSFECDYATFYRIHFFS
RVAFRFYREVSRFVCYDRLSLYEGVRDSFDWLKWLPSEKTFNVQVTGRTS
SLSHSHFTALEVKNSITDLQQSVWNKRSNISLDNPDLIIHLHLNNDRGVL
SLQSTFESLHKRGYRPAIGYAPLKENLASGLLKITEWNGTKPLVDLMCGS
GTFLIEAINQILKVPLKFQQFYLFENWLDFNKYIFLEEKNKAQKRVVTFE
KLSKTIGCEINKDVFDQAKVNIQLAGLENYIELQNDDFKNIQFKSSEGLV
LCNPPYGKKLGDENELITLYEDMGEFLKKNFSGWEFWLLSGNPKLTRYLK
MKSSLKIPVSNGGIDCRWIKYLIR
>PMM1467 putative DNA helicase
MLNLEEYFPFPLDPFQIEAIKAINSGNSVVLTAPTGSGKTLIGEFAIYRG
LSHESRVFYTTPLKALSNQKFRDFINQFGEKKVGLLTGDISINRDAPILV
MTTEIFRNMLYGEFEEFDDPLVNLESVILDECHYMNDPQRGTVWEETIIH
CPSRAQIIALSATISNADQLQNWIEKVHGPTVLVNSNKRPVPLDFIFCSA
KGLHPLLNNKGNGIHPNCKIWRAPKGQKKKGKVGRIMQPKAPPIAFVVSK
LAERNMLPAIYFIFSRRGCDKAVEYIKDLSLVSYSEANLISQRLDVYLKN
NEEGIKDKFHCEALKRGIASHHAGLLPAWKELVEELFQQGLIKVVFATET
LAAGINMPARTTVISTLSKRTDEGHRLLFSSEFLQMSGRAGRRGKDLQGY
VVTLQTRFEGAKEASSLAISEPNPLVSQFTPSYGMVLNLLQNYSLDKSRE
LIKRSFGSFLYLGESSEETAILYNLGRDLKELKKITSNISWQDFDSYEKL
KSRLKEERRLLRILEKQAAEKLSEEITSALTFIKDGSLISIKAPQINRKV
VPALICKKIYESKKIKSLLCLTIDNLFILIKPSYIVNIFPDLEEIEILRL
EEPKMNFSGEVVRGDNESQTFVDRIFDISEKYDLRTPQYDLSTEVLAQKK
LITNLEETITNQPAHKFGDSKKLKRYRKRIIEIEQEIVMKNNLMEEKENH
NWIKFTDLIKILNHFGCLNDLELTEVGQSVGAIRSENELWVGLVLLSGYL
DDLAPPDLAAIIQAICVDVRRPNLWCNFKPSIKVIDVFNELESLRKLVAS
KQNKFNINTPIFLETELTGIISEWARGKKWKELIFNTSLDEGDVVRILRR
SMDVLSQIQYCVGVSNKLKNKAKLALKAINRFPVSESNDLLKVSDNINPA
TKRIDNNS
>PMM0729 possible ATP-dependent DNA ligase
MSLKKFSELFINLDSCNSTNKKIGILQNYFSSNEALENSWTIYLLTGKNN
KRFISGRSLKTLFSEIYEYPLWLIDSCYLKVGDSAEVISLLLRNVITEKN
TKYQDGSLHELLNKSFPELSILKEDEKKLRVKEIWETIPKENLLVINKIL
TGTFRVGVSIGLITKSIAKLINIDEAIISHRLMGDFIPSEESYKLLIDKK
INPSELNYKPYPFLLANTFEKKIIDKSTNDFQFEWKWDGIRIQLIKRSGK
VSIWTRGQDLVNKSFPELVEKISSIKDDFVIDGELLVWDFKKSLPLNFSL
LQKRINRKAPSRLIQKNLPIIFIAYDILEINGEDQRDSNLEIRRNSLEKH
LYNWLNESKEELSNIFKISDLIYPKNWEEVETFKNNSRDNGTEGLVIKNK
KSIYTPGRKKGLWWKYKVDPMQLDAVLIYAKGGSGIRAGLYTDYSFALWK
DGELIKFASAYSGLNNTEIKELDRWIRQNTIDRFGPVRSVRPEMVFEISF
ENIQISKRHKSGIAVRFPRITKWRKDKLIKDADTLENAQKLMLNK
>PMM1517 conserved hypothetical protein
MSFYYLREEMGLALNDILDGICSNNIENLRDDLAITWINYKSENNQLNKG
FGCGINNTKLIYPASIVKLVYGLAAYSWIDTKKILFTQEISDAVNKMLFY
SSNDATSFLIDIITGTTSGPCIEGDSWENWKYQRSIINDWLKELNWSELN
EINCCQKTWDDGPFGREKEFYGTENNNRNMMTTDSTARILEEIMIKLDYQ
KDNLNLRSFLKRNLDKKVLNMDPLNQVNGFLGEGLPENTNFWSKAGLMSQ
ARHDAAWWVNNDSLQTLLVIFGNGEKYLKDETIFPQIAKAVYKYNNNFA
>PMM1647 conserved hypothetical protein
MPIQIIWGNDLNASNKFIKQIIDEKVSKTWGEINISYLNGDDDNQIKQAF
DEILTPPLGDGSRVVVLKNNPLFTNKNEEIRLKFEKIYQNIPSNTYFLLQ
NTKKPDSRLKSTKFIQNLIKKDLAIETSFSLPDIWDFEGQKRYLEFTANS
MNIHLGKGTADLIIDSVGNDSFNLASELSKAKIYLSAINNNENKGLILES
DVVKKIFNDQQSNIFKIIDHLLQNSISDGLIEIYYLLKKGEPALRLNAGL
ISQIRMHTIVKLLHKSGEQDLSKICKLANISNPKRIFFIRKKVNNISSDF
LIKLMSNLLDIESSLKKGNNPINVFAENLVNLS
>PMM0502 conserved hypothetical protein
MNHCLIQAVINSAPQMRYTKENKTPIAEMTVNFKGLRDEDPFRELKVLGW
GTIAQEMVGELKEGQNIVIEGRLRMNSVTRKDGTKEKQPELTASRIHNIS
PGVQITSEKKETNISHSNNSNSSEEKSGNTENSQWNTSPLVPEVDEIPF
>PMM0247 conserved hypothetical protein
MSGWLFIIFLLLLGGLISTLGDLLGSKIGKARFSILKLRPKKTAILITIL
TGSLISASSLFLMILVNRQLRVGLFRLGDLQKKLQESKQVLIPLEKEREK
LENKIKAKETEFKQLERNIIALRSGKFVIRSGQSLIISEISSSNLKDIKS
KIEKIIINANRYTHKIVKPKNKEVKNLLLLRKNHIEEMQNIILKGGNWVI
NIKSVRNVLTGENFVYAFPEITENKIIVRKGEKITKIDFKQEDFNKKDFG
DKVNFLLSSSLAEIKRRGSLVNEIKLRGDSIKELRDFLNKNDKTNFELEA
VSLFNSKTAQPVIVELNVNYPES
>PMM0386 possible uncharacterized DNA methylase
MIKNIKTKIEKYGEVFTSSNEVNGMLDIVDEETRRLDSTFLEPACGDGNF
LIEVLDRKLKSISLLNKSIKLNYQIDIFLAVSSLYGIDIQKENVSKCQLR
LFKKIKKFYENKYKEDTDFFGVIKFLLSKNITWGDALTLKLPSSDTPIIF
SKWSLISKYKVKRLDYSFKSIINNEELNALPLFSDLGELAFIPEPIAEFD
LIHFLKINKNEKET
>PMM0328 FPG, Formamidopyrimidine-DNA glycolase (FAPY-DNA glycolase)
MPELPEVETVRRGLEQKLKNFIIKRVEICRESTVAYPIDKIDFIEGLQNS
LLYKWNRRGKYLIAELKKTVSNNNDANEISFVENGVLVVHLRMTGYFTFN
NTLTNPCKHTRIRLFDNNNNELRYIDVRSFGQMWWVRDGLSPNNIIKGLG
TLGPEPFSESFNVNYLKKVISNKTRSIKSILLDQTIIAGIGNIYADESLY
SAGISPFREARTINKNEIKRLRRAVVDVLKKSIGAGGTTFSDFRDLEGEN
GNFGLQTNVYRRTGKKCRQCKNLIERQKISGRSTHWCRKCQK
>PMM0565 dnaA, chromosomal replication initiator protein DnaA
MQAANPIWAEVQQLLQKNLSKPSFETWIRPAKFNCFENGLLTLITPNNFT
SDWLRKNYSETIEKAAEEICGHNVKVVFKSETNINNNSNSSDSVSQQNIN
SQSKSFSINQSNNLINRSKKSHSLNTRYVFKRFVVGPNSRMAHAAALAVA
ESPGREFNPLFICGGVGLGKTHLMQAVGHYRVEIDPDAKVLYVSTETFSS
DLIQSIRKDGMHAFKNKYRSVDLLLIDDIQFLEGKEYTQEEFFNTFNALY
EAGKQIVIASDRPPSQIPKLQERLISRFSMGLIADIQPPDIETRMAILQK
KAEQERMNLPRDLIQFIAGRFSSNIRELEGAFTRAVAFASITGLPMTVQS
IAPMLDPNSVGVVVTPKQVIKKVSDFFEVSAEELVSSSRRKPVSQARQIG
MYLMRQGTDLSLPKIGDEFGGKDHTTVMYAIEQVEKKLSSDPNVASQVQK
IKDLLQIDSRKNL
>PMM1674 dnaB, DnaB replicative helicase
MVSVPFSNNGSNKNFKKDFNNENAGLVPPQNIQAEEAVLGGILLDPDAIG
RIADLIKPEAFYINAHQEIYKTALMLHTQGKPTDLTSMSAWLADNGSLEK
IGGNSKLVELVENVSSTASIEQVANLISDKFIRRQLIRSGNEVVQLGFDQ
TQETNEVLDKAEQKIFEISQEKPTKGLTQAAEILTSTFNEIESRSLGTSV
AGIPVNFYDLDAMTQGFQRSDLIIVAGRPSMGKTSMVLNLAKNVAQSQDL
PVCVFSLEMSKEQLTYRLLSMEVGIESGRLRTGRLQQEEWPLLGEGINSL
GQLPIFIDDKPNLSVLEMRSLCRRLIAEQKKELGLIVIDYLQLMEGTTPD
NRVQELSRITRGLKSMARELKVPVVALSQLSRGVESRTNKRPMLSDLRES
GSIEQDADLVLMIYRDEYYNPETEDRGITEIIVTKHRNGPVGTVKLLFEP
QFTRFRNLAN
>PMM0945 dnaE, DNA polymerase III, alpha subunit
MGFVPLHNHSDYSLLDGASQVSKIVDRACELGMDSIALTDHGVMYGVLDL
VKKCKSKGIKPIIGNEMYIINGSIDDPQPKKEKRYHLVVLAKNHTGYKNL
VKLTTISHLNGMRGRGIFSRPCIDKSLLEKYNDGLIISTACLGGEIPQAI
LKGRIDVAENTAVWYKRIFGDDFYLEIQDHGSIEDRIVNVELIRIGKEHQ
IKVIATNDAHYISNMDVEAHDALLCVLTGKLISDEKRLRYTGTEYIKSED
EMLRLFNDHIDKESIKEAINNTVEVSQKIEEFELFGTYRMPKFPLKEETD
SLSFLTKITKQGLLSRLNKNNLDEIDEIYKKRLTSELKIIDDMGFPDYFL
VVWDYIKFARDSSIPVGPGRGSAAGSLVAYALQITNIDPVKHGLLFERFL
NPARKSMPDIDTDFCIDRRNEVIDYVTNRYGEDKVAQIITFNKMTSKAVL
KDVARVLDIPYGESDKLAKLIPVVRGKPYKLNEMIDKKSPSPEFRDKYLK
DIKVKKWIDLALRIEGTNKTYGVHAAGVVIASDPLDMLVPLQRNNEGQII
TQYSMDDIESLGLLKMDFLGLKNLTMIDKTISLIESSTGQKINIDKLPPK
DNKTFDLIGRGDLEGVFQLESSGMKQVVKDFKPNSLEDISSILALYRPGP
LDAGLIPKFINRKNGSEKIDFPHPFIESILTETYGIMVYQEQIMKIAQDL
AGYSLGDADLLRRAMGKKKVSEMVKHRNIFIEGSCKKGVDKKIANDLFDQ
MVLFAEYCFNKSHSTAYGAVTYQTAFLKAHYPVAYMASLLSVNAGSSDKM
QRYISNCYSMGIEVISPSINLSGIDFTIKKDQILFGLSAIKNLGDSAIRN
IIDNRNKLGVFKSFSDLCDRLPSNILNKRNLESLIHCGALDEFSENNNRA
QLFSDLEYVMEWASSRNRDRISGQGNLFDSISKNDTKEFSLSQGSKVEDY
SLIEKLKLEKQLLGFYLSDHPLKHLAKPAKLVSPISISQLENSHDRTKVS
LVGMIPELKQITTRKGDRMAIVQLEDLSGSCEAIVFPKTYCRLSEFLLTD
TRLLVWGTIDKKSDKTQLIIDDCREIDNLKLLVINLDSSQASDIRIQNTI
RDCLVKFKPDRDKCGIKIPVLAAVRNNDSITYVKFGDQFCVGDILGVSKL
LSDKSFQVNLKSMIA
>PMM0001 dnaN, DNA polymerase III, beta chain
MEIVCNQNEFNYAIQLVSKAVASRPTHPILANLLLTADQGTNKISLTGFD
LNLGIQTSFDATVNKSGAITIPSKLLSEIVNKLPSETPVSLDVDESSDNI
LIKSDRGSFNIKGIPSDDYPSLPFVESGTSLNIDPSSFLKALKLTIFASS
SDDSKQLLTGVNFTFNLKYLESAATDGHRLAVVLVDNKENFDEKEDFASN
EENLSVTIPTRSLREIEKLVSLRSSENSIKLFYDKGQVVFISSNQIITTR
TLEGSYPNYSQLIPDNFTKIFTFNTKKIIESLERIAVLADQQSSVVKIKL
NEKDLALVSADAQDIGNASELVPVSFYFDQFDIAFNVRYLLEGLKVISSE
NVIFKCNLPTTPAVLVPEDNINSFTYLVMPVQVRS
>PMM0621 dnaQ, possible DNA polymerase III, epsilon subunit
MELPNKKKINQLDFLNNEIKNNDNEKPNFLNKSISSSKNNNKNQSIENIL
ILDTETTGLDENKDEIIEVGCILFNVNTKSVLSQVSFLFPVSSNEAEHVN
GISAEVTNIKQPWEDGLNFFLKLVDCSDLIVAHNVEFDKKWFGKGRLPKL
EKKWICSLEDINWSFQKNLKNRPSVTDLALSFSIPVWSLHRALSDCFYIS
EVFKKCENLEELLCKATEPRFLYKALVSYEERSLAKKAGFLWNNPKQGAW
AKKLTVEEANSLDFKVQILD
>PMM1658 dnaX, DNA polymerase, gamma and tau subunits
MLNIHKPFHQKYRPLNLDELVGQEFISITLKQALISQKIAPAYLFNGPRG
TGKTSSARIFAKSLNCLSSKQPTPNPCEKCELCIQIAEGNALDIIEIDAA
SNTGVENIREIIDRARFAPTQARWKVYVIDECHMLSTAASNALLKTIEEP
PERVVFILATTNPERVINTIQSRCQKFDFKRISANTIFNNLSAIANKESI
KFEDQALKLIAKRSNGGMRDAQSLLDQLSLLPNGVTTKNVQSLLGEVSEN
DLTDLINALINNQPESLLISCNNLYDAGNEPNEILVGLLNITRDLLLKTL
NNNYSEMYYTSIEFQNELNKFSYNVSKNRIIDWHNKLKNVDYQIKTSDNP
RLWLEIHLTSLLEKNINQTIINKKELINKQVISEDNKNQNESGDFNKKEL
INKQVISEDNKNQNESGDFNKKELINNQDINQNSKNDNQTDYLKEKWELI
LSKLELPSTKMLLSQQAELASIDSNEVLIALSPNWENMIKSRKVIIENAI
KKVFGDKVKLNFSSKKINITKTANLQDKVIKKLNDNYEKQSTNFHDSPSP
TNKPKPESYNNSPENLANFFNGEIVDLDE
>PMM1063 gyrA, DNA gyrase/topoisomerase IV, subunit A
MSDIVDSENSGLSENNDRIIQTDLRNEMSRSYLEYAMSVIVGRALPDARD
GLKPVHRRILYAMYELGLTSGRPYRKCARVVGEVLGKYHPHGDTAVYDAL
VRMAQDFSMRMPLIDGHGNFGSVDNDPPAAMRYTESRLQSLTDESLLEDI
ESETVDFSDNFDGSQQEPNVLPARIPQLLLNGSSGIAVGMATNIPPHNLG
ELIDGLKAIIKNPSTEDKELFELIKGPDFPTGGQILGRDGIKETFKSGKG
SITMRGVADIEQIKSPGRAEKDAVIITELPFQTNKAALIERIADLVNEKR
LDGISDIRDESDRDGMRIVIELKRDAYPQVVLNNLFKITPLQNNFSANIL
ALVNGEPTTLSLRKMLDVFLEFRIETIKRRTSFLLRKAEERDHIIKGLLL
ALNAMDNIINLIRSAKDTNSAREQLQNDHELSVIQADAILQMQLRRLTAL
EADKIKSEHDELTKKITDYKNILNDKERINEIILEELSKIDERFSSPRKT
EILNLGGGLDDIDLIANERSVVLLTTAGYLKRMPVSEFESTSRGSRGKAG
TKNQQDDEVKLFISCNDHDTLLLFSDRGVAYALPAYRVPMSSRTAKGTPS
VQLLPIPREEQITSLVSVDSFDNECYLLMLTKAGFIKRTPLSAFSKVRSN
GLIAINLEEGDALTWVRLSTEGDSVLIGSSRGMTIHFRLDTNELRPLGRT
ARGVKSMNLKEGDKLVSMDVLSCDLVDQLANLEEEDIENENEEDLESKSS
NGPWILVASAFGLGKRVPVTKFRLQKRAGMGLRAIKFRIKDDSLVGLKVL
GEGEELLLVTERGVIVRTNADKISQQSRAATGVKLQRLDDGDHLSEVVLV
PHEQIEEDQLISNEEET
>PMM1634 gyrB, DNA gyrase, subunit B
MSEEKRSNKISNDYGADQIQVLEGLEPVRKRPGMYIGSTGPRGLHHLVYE
VVDNSVDEALAGHCDHIEIVLKEDGSALISDNGRGIPTDIHPRTGKSALE
TVLTVLHAGGKFGSGGYKVSGGLHGVGISVVNALSEWVHVTVSRDGYEFN
QRFEKGIAKGELKSQKQQKKPFRKGTTICFKPDTSIFTDGIKFDYALLSS
RLRELAYLNGGVKIIFRDERQNLSDGSFKEEIYLYDGGIKEYVEYINKEK
ESIHSEVIYVDSQKDNVYVEAALQWCSDVYSDNILGFANNIRTIDGGTHI
DGLKTVLTRTFNAIAKKRGKRKEVDKNLSGENIREGLTVVLSVKVPEPEF
EGQTKTKLGNTEVRGIVDSLIGESLIKYMEFNPNVFDLILEKAIQSFNAA
EAAKRARDLVRRKSVLESSTLPGKLADCSSRDPSGAEIYIVEGDSAGGSA
KQGRDRRFQAILPLRGKILNIEKTDDAKIYKNTEIQSLITALGLGIKGEE
FNVNSLRYHRVVIMTDADVDGAHIRTLLLTFFYRYQRDLVEKGFIYIACP
PLYKVERGKNHKYCYNENQLKQTIEDFGEKANYNIQRFKGLGEMMPKQLW
DTTMNPQTRMMKRVEIEDALEADRIFNILMGDKVAPRREFIETHSANLDM
ATLDI
>PMM0129 holB, DNA polymerase III, delta prime subunit
MIDLKTENLLINQEVNENLESILKSKAFSNGYIFYGPEGIGKKQTAMKFI
MEIFNKYSSNSNIEKKIIDKNHPDFLLIEPTYFFKGNLINRSEAETTKNN
KETIRIEQIRNLKTFLGQKSIESGGKIVLIDDAHLMNEAASNCLLKTLEE
PSNGIFILLTSRLNLLLDTIISRCQLIRFKAFSYKQLEIFIRNNLDSTVF
DIYKEIDLEYFINSANGSPGKILKDIKIWNQLPNAIKENLDFPLSDNLEI
LKITKLISEELDIDQQMFLINFVQQKCWAKTRNKNIVKKLEDLKVHLKGF
IQPRLAWEVTLLKIAIEDL
>PMM1679 lig, ATP-dependent DNA ligase
MKHEELRKEEIIKKLELHPSRLDKEKVIFEAMENGLNDFFEGITMALDPL
VTFGVKQVPEKKEETSGQGCKWSIFKVLTNQLIKRELTGHAARNAINLVM
KSATKEQWNGFYRRVLIKDLRCGVSEKTINKVAKKFPRYSIPIFSCPLAH
DSANHEKKMIGKKQIEIKLDGVRVLTIIRKNKVEMFSRNGKQFNNFGHII
TEIEKVLEKHPAPYDLVLDGEVMSANFQDLMKQVHRKDGKQSKDAVLHLF
DLCPIKDFKKGLWEKDQATRSMLVKDWVAKNATLLKHVQTLEWENVDLDT
PEGQSRFVELNKSAVEGGYEGVMIKNPHGWYECKRTHNWLKAKPFIEVTL
RVVAIEEGTGRNEGRLGAILVEGKDDQYNYRLNCGSGFSDSQREEYWSKK
DKLIGQLVEIRADARTQSQDAETFSLRFPRFKCFRGFEPGEKI
>PMM0217 mutS, putative DNA mismatch repair protein MutS family
MIEKSHYKNSSAHRSLSEESISLLEWDNLKIQLSSFASTKMGENAILESE
IPTEYEISRRLLQETIEINELEKTLDKSISFSGVFDISKNIEICSKGGVI
NSSELLEIAETISAAKDLKKILLDFEARPFISSFLNRLIDHNQIEKILKN
GIESNGRISDRASQKLANLRQDLLSKKSERRILVDKFIQKNINYIQDTII
GDRYGRPVVAIKVQFGEKFKGIIHDSSASGNTIYLEPESIVFKGNKIASM
EARVAGEEFKLLKEWSQIVSDNDKSLIEMSDILLRTEHALIRSRYSNWIG
GNAPIVENNPIVNLIGFSHPLLIWENKKKEAPKPVSIDFHINRNTKVVAI
TGPNTGGKTVALKGLGIALLMARSGLFIPSIKNPIIPFCPNIFVDIGDDQ
SLEGNLSTFSGHILRIRNILESLNNKKGLSVVLLDEIGSGTDPSEGTALA
IALLKEFATLSDITLATTHYGDIKALKYSDDRFENVSVAFDEESFKPRYT
LNWGIPGRSNALSISRRIGIDEKILNEAANYLKPKEVENINSIIKGLEDE
RIKQQNSAEEAAELIARTEILHDEIKSNYEFQKNNAEKIQESEKQKLSKY
IRAAKKEVINLIKKLKDQNANGEDSRLIGIRLKEIEKEHLTQTNINKEIS
WSPKIGDFIKIKSLNSTGQIIDIDRKARSFEVKCGSFRSTLLINEFEGLN
GEKPNFKNSKIQINSVREDFSFSKIRTNKNTIDVRGMRVHEAEIIIEEKI
RKFHGPLWIVHGIGTGKLKKGLLIWLSSLHYVDKVEDAATNEGGSGCSIA
WIK
>PMM1645 mutS,fdv, putative DNA mismatch repair protein
MEEDTIIQKDLFAINHELKRPNNSSQIPDDLSTEELKKESQKRPRQRKNS
TNLINKFKNNSNSERKNDCINEKSYSYKTVEKQKLTPILKHYVTLKEENS
NRLLLYRLGDFFECFFEDAVFISNLLEITLTSKDAGKDIGKIPMAGVPYH
AMERYCAELIKKNHSVVICDQLEKSTGNYGTPLKRGITRIITPGTVIEEG
MLVAKKNNWITAIHLSENISENLYEWGISRADVSTGELLTMEGQSISKLF
DEIIKLDTSEIIIGSNEEKKLLENQNQQITYTVTQETFFSINEACLTIKN
YFQILSLEGLGLKHLNNATKALGGLLNYLEKINPSNLENDSSLKISLDFP
QIQFPKDHLIIDYQTQKNLEIKNTQRENNYAGSLLWSIDRTYTCMGARCL
RRWIDSPLLNIDEINKRQNIISNFLESKKLRTDTQNILRAMGDLERLSGR
ACAGHASPRDLIAISEGLKKLPRLKSIVKLFKYEIPSWTNQLKNIDNELL
ELADLISFKLVQNPPLNTSEGGIIHDGVDNVLDGLRNLIDDYSDWLNQEE
LKERKISKISNLKIQFHKNFGYYISINKSKVNLAPAHWIKRQTLTNEERY
VTTEIKNRESKIFQVKNRAAAKEYELFCEVRNLVSAKTKRIRSVAKAIAC
IDALLGLAITSLENNFIKPTISPITNSTDQQSTKIIGGRNPIVEQLLTNR
KFISNDILFNNKQKLIILTGPNASGKSCFIRQIGLIQILAQIGSFVPASK
ADIQIVDRIFTRIGAVDDQSTGQSTFMVEMSETASILNQATSNSLVLLDE
IGRGTSTFDGLSIAWSVSEYLAKKIVCNTIFATHYHELNYLKHTNTNVEN
FQVLVKQKKDQLFFCHKIEKGGANKSYGIEAAKLAGVPKEVINKAILVLD
YLEKNNQLNAQIKIK
>PMM1593 pebA, phycoerythrobilin:ferredoxin oxidoreductase
MFESLKNFVKTNIEDLDGKELEISKEFKEHHNKDSKYIIKNWIFESQQYR
KWRITKLDGGDKLQVFNTVAYPNFKSEFPILGADILWFGTSQKLLAIFDY
QPLIQEKKYLQKYCSSLDFIKNQYSVFDNHKMKNIYDSKKYFSPWVMICR
GNKLNLDRDLNNIFCSFVSNYLTINKLHQNNQFLDLEQIKNNQIDYDKYS
AEKDPADKLFKTFFGETWTENFINNFLFTLNHNPLK
>PMM0285 phr, putative DNA photolyase
MNKPRILFWHRKDLRIFDNQALIKAFSLSDAITSTYIFDKNYSHDFNASS
RAWFLGNSLQELGNNWKKMGSRLVLEEGDPVLIIPQLAKKIDAKFVFWNR
SIEPYEINRDLEIKNNLKEQNIQVIETWDHLLIEPLKIFSGNNNPYSVYG
PFYKNLKSKINLLGSFEQDKVVFQFKDIDNKFKENKAINSSDSVLEKFIK
NIKFPGSNICPCRPGENAAQTLLENFINEKKIYSYNSARDFPSHNGTSFL
SASLRFGTISIRKVWNATLNLNSDFANQENYLSIETWQKELVWREFYQHC
LFHFPELEKGPYRKKWDHFPWQNNNELFQHWSNGETGVPIVDAAMRQLNS
TGWMHNRCRMIVASFLVKDLICSWQMGEKKFMETLVDGDLAANNGGWQWS
ASSGMDPKPLRIFNPYTQAKKFDPICEYIKYWIPELSRVSNSELLNGEIS
NLEKNNYSSPIVNHNIQQRLFKSLYAEI
>PMM1140 polA, DNA polymerase I
MSLKSKDSKKPILLLVDGHSLAFRSFYAFSKGVDGGLTTKEGFPTSVTYG
FLKSLLDNCKNINAEGVCITFDTEKPTFRHELDPNYKANRDVAPDVFFQD
IEQLEIILKESLNLPIFKSPGFEADDLLGTIANDASSKGWCVNILSGDRD
LFQLVDDQKDIYVLYMGGGPYAKSGNPTLMNENGVKEKLGVYPERVVDLK
ALTGDSSDNIPGIKGVGPKTAINLLKENDTLDGIYKALDIIQKDEDKKYQ
GFIKGAVREKLKNDKFNAYLSRDLAKIDVEVPLVLSNGYELNQINQDALS
ESLQKLELSTLLRQVDIFNSAFSKGGFNKNNEEKQKKKESKVSASINLEE
TEHEIPKIKVNIVNNFKLLDQLVKRLEITKEIVALDTETNSLNPLDAELV
GIGFCLGEEINDLFYIPLSHQSQKKEMNQLAIEDVFFNLRSWIESPEKEK
TLQNCKFDRQIFYNHGLNLRGVTFDTLLADYILNNQEKHGLSEISFREFG
FKPPTFKETVGKNKDFSFVDINDASTYCGYDVLLTFKIAKIFKERFNNEN
KDLTKLFKEIELPLEPVLSEMEMNGIRIDTTYLNELSGELKSTLENIEEN
VFEIAKQEFNLSSPKQLGEILFEKLNLDKKKSRKTKTGWSTDAVVLERLV
EEHEIIPFLIKHRTLSKLLSTYIDALPNLISEKTGRVHTNFNQAATATGR
LSSSNPNLQNIPVRTEFSRRIRKAFLPEKGWKLLSADYSQIELRILAHLA
NEEILINAFHKNDDIHSLTARLIFEKEDINSDERRVGKTINFGVIYGMGI
KKFARSTGVSTTEAKEFLIKYKERYAKIFKFLEFQERLALSKGYVETIFG
RKREFKFDKNGLGRLIGKDPYEIDLQTARKAGMEAQSLRAAANAPIQGSS
ADIIKIAMVQLNKKLLEMNIPVKMLLQVHDELLFEVQPDFLEITKDLVKE
TMEDCVKLNVPLLVDIGVGNNWMETK
>PMM0497 priA, primosomal protein N' (replication factor Y)
MMPASNNLSNTLYKFDVLLDIGSHTNAFSYLDGDNLGVEIGDIVSVRLKG
RLLNGLTISKSPFLKTDKNKKDFDEESNFEYLSIQSIVQKKVIQDWWREW
LEDLALFYRVTSLKMFKTAFPPGWIGKHKKLSQNFKYQIWIESQIDLEFN
NDDLTKRELSLINILRLKGKWQSELLRFGFNSTIINSMVNKKLLIKAKRK
KIVSTKLSSFKNDCIKLKRPNLTQEQKKIYGEMQEMRPGDVCLLWGETGS
GKTEIYMRMAEDQLLNKKSCLMLAPEIGLIPQLIDRFSKRFQNEVFEYHS
NCSSRHRTLVWKKIIDEDEPLIVIGTRSAVFLPIQNLGLIIMDEEHDVSY
KQDSPMPCYDARDVALERVKRNPAKLIFGSATPSMTTWKRVVFEKKFKML
RMKERISRTEIPEIKVVDMRCEFKKGNTKIFCGELLELISQLKENQEQAI
VLIPRRGYNGFLSCRNCGFIINCPNCDVPLSVHAGSKGKKWLSCHWCDHK
AKVINTCPDCESKAFKPFGIGTQRVIEFLNNEFPELRLLRFDRDTTSGKD
GHRNILSKFSNGNADILVGTQMLAKGIDIPNVTLSVVIAADGLLHRPDIS
AEEKSLQLFLQLAGRAGRAKKSGKVIFQTYKPSHPVLSYLKNRNYEGFLH
ESSKLRKDAKLFPFCKVCLLKISGKNFELTEITATKLAKYMISFCKDNKW
TVIGPAPSLIAKVGNKFRWQILIHGPENSEFPLPDRSDLWQKIPKNVFLS
IDLNPVEL
>PMM1562 recA, RecA bacterial DNA recombination protein
MSLEERRKKDSKESSSEEKNKALNLVLGQIERNFGRGSIMRLGDASRMKV
ETISTGALTLDLALGGGYPKGRVVEVYGPESSGKTTLTLHAIAEVQKNGG
IAAFVDAEHALDPVYAASLGVDVENLLVSQPDTGEMALEIVDQLIRSTAV
DLVVVDSVAALTPRAEIEGEMGDHVIGSQARLMSQAMRKITGNIGKSGCT
VIFLNQLRLKIGVTYGNPETTTGGNALKFYASVRLDIRRIQTLKRGTEEY
GIRAKVKVAKNKVAPPFRIAEFDILFGKGISTTGCLLDLAEETNIIIRRG
AWYSYEGENIGQGRDNTIIWLDQNLEIKNKVESIVKTKLTEGTEVSSNSM
KALNNNPENDVIANNIKKIA
>PMM1103 recB, possible UvrD/REP helicase subunit B
MDINKIKLDNNFKLIEASAGTGKSFTLAHLVLRNVLEKKIKSEEILLLSF
TKNTCTELRDKILSRFCKLKLFLQNPEETELDNTLLEWYKNFQKEETNPK
KIIFDIDNFINTIYKLKVTTFHAFCNNILEEFSIDIGSAQDPFIENNIDN
LYQDIIDDLWIEQFQNLDPEIISAVNQKKISSIYGSKINKSFFVEILKNI
DQENICKFEIINKYKNIDISIYLKEFLHINWKAFCVEWNNNGEELYLKLI
SLGKLIKEIGCKSQVYSSKPRNNKFNQITEWIEDINKRLNSEDISQLLYE
ILNEDLLFKYFYNKNINKEINKFDLSLDFSSFKLLQDKIYKIKEGFYTEF
VRIFIQLANIKLITLKRSLSIFNFNDLIKTVEKKYLGSDLTNDKSLSEIQ
NRFKCVLVDEFQDTDNIQWSIIKKFFYTNNHFLLCVGDPKQAIYKFRGGD
IETYLEAKSDAIEVFSLTNNFRSSNKLLDVINNLYKNGLRESKLEYNNLN
SKLNKSFNHKFDFKNVFEIVEFSSKEVDIEDLVTKYIVSFLLNNNEIDIN
KISILTLYNSQCLELKNKLIKLNIPCQIKNKKNIFDTEASTLLVLFIESI
LYPRRYRNISLLATSKFIEMDMAELIDHQISKKIEILTNQCISWSLELKE
KGFLTLVNELIINYKSSSIIFDADLYSNLFQLSEIIEIELMNNDFNLNKV
FKWYLNQLDNSLRSCTGEDYFTKDYNLQNGINLSTIHNSKGLEYEIVLCP
YLSTISNKSNKTKGPIWKSNLDRSIYINISNNYSKVEDFKLIEERDLFNE
SERLIYVALTRSKYKLIIFNDINNTNNIINNDLLPNLENINFHKSKIEHK
IAAINIREISNKFNFIGLKNNLWKINKVNTKKPIPSEEVISFSSYSSWIS
KEKKTDYASNQYKDYEDNISILNNSQDTNLEKSKNCPKYLTLSNPLSDFP
KGTIAGTCLHKIIERFDFQNDNTDKLLDLINEELNFFQIDSSLALNVREG
ILRIINVSLGRKLLNKKLIDIPSNNILKEVKYNLTLSYNGKNINSYDISK
CFLLDQEFEFGKSYSNKINDLQILNKGFHSGCIDCVVPIGNKLEDSKWWV
IDWKSNFISGSENSDCLPGNYNYENMKEEMIKHHYPLQSHLYLLALHRLL
KWRLKNYQPNLHLGGYVYLFLKGLPDKKLFEKSVEKDISPGVFIGQAPIN
RINYLDKLF
>PMM1102 recD, possible exodeoxyribonuclease V 67 kD polypeptide
MNHTNLDIEAFQYNHIFNLLQDIFGFNEIKDGDFVKDTLKILLEFEKNGE
TIVEVDKRLILFDLLKDGWPNEHLKVLKDLGLLNSFNSPFIFSDRKLSLA
KWSGKINRVINIFLKKIDKIPIKINDDNKLHQIKNIFKSSNLVFLQGGPG
TGKTTLIINFILNSLKSDRFLNIGLAAPTGKATSRLKESLNEQKDIIFSK
SLDQIECQTLHKWIFYSEHKAIKLKFKLKELDIFIIDEMSMVNIDIIELI
LDLLAKDCKIILVGDKNQLPPVKNSSIWNYLFEYSNNEVIKSCIVNLNKT
YRNSGDIELLSNLIFNPTDSLFKKKIKELENDKKSKEVNILKSINKNIPL
GLLNEIKDYINKLRISTSNLSKKEYIFQKTFRDLMSHEKDLINNIFTDLQ
SHLILCEKNTGTWSVENINDIVLGQRKPYDFTSLEEGIPIMCTENNNELG
ISNGDIGVLIGKNENRKFLFRKFNDNNDLVVDFIEPSTLDNVVPAIAITI
HKSQGSESEKVSILWTQKSQINNYKEDLKESKLIFFRDSYEKRLLYTAIT
RAKNFLDIYFLN
>PMM1573 recF, putative DNA repair and genetic recombination protein RecF
MESVEVLSQLKSNRALSDKDLIENDSDMAAIFGQIDFTDNLKVNLFRKGA
KKIYVNDSLLKKQTEIQNYIRSVCFCSNDIYIVKSEPGFRRSWIDKVVSQ
LEPVYVELIHRFNRLLKQRTHFWRSESFQKDIYSEVIESFDIQMSLISTR
IFRRRRRALSKIKPYVEYWHNHLSKSKEQIGINYLSGLENINQEEEEEVI
SKKILEQLQKQRPLEAVTGKCNFGPHRDDIEFLINNISIRKYGSSGQQRT
FILALKMAELDLLRNMIDLPPILILDDVLAELDITRQNLLLNSVGKDSQC
LISATHLDKFNKSFLSSSQMIYL
>PMM0756 recG, ATP-dependent DNA helicase recG
MTNNEEYINLIKDWIRPLQKALTLESENRFTNLLGKKQYFNDYLNKSLSN
LNNLKLTNEFIKLFGEFSSKYSEYNDLDIKQRKRLVIDTRKGLLKLGKSI
NLNYSNKYTDSYYSKNIDSNLSLNSDIGLIKSIGKINKNKLNELGIYCIK
DIINYFPRTYLDYTNRVKIINLKPDNLYTCIATVKKFYIYKSSNNSNLSI
MNIVIFDETSSIKVTKFFLGKRFRSYSFFSSQKSLYIPGTKLAISGKVKL
SEYGKNFVDPQIEILNTNEESFNFSGKIMPLYSLSESFSNLSFIRLIKRV
IIYSKQYPDILNQKQLNFLSLVSKSDSLINIHLPVNQNALIESKKRLVFD
ELFLLQMKFLLRKRKNNKKLTIQKSIKKNFLLKDFLNKVPFQLTKSQEKV
LDEIKSDLSDLTPMSRLLQGDVGSGKTIIAIATLLIELEKDQQGALMVPT
EVLATQHYKNLIQFLNPLLVSVELLTGNTPQKKRKEILTNLKNGMVDILV
GTHALFEDKVVFNSLGMVVIDEQHRFGVTQRNRLLNKGDNTNLLSMTATP
IPRTLALSLYGDLDISQITELPPGRVPITTKIISEEELNKLFKRVENEID
KGKQAYVILPLIEDSEKMNLSSAKKIYQYLSEEIFLKNKVGLLHGKLNSE
EKNNVINSFVNNEVNILVSTTVIEVGIDVPNASIMIIYNSERFGLSQLHQ
LRGRVGRGSQKSFCYLVTSENNGLENKRLRVLEKSNDGFYIAEKDLELRG
PGQLLGYKQSGLPDFVLDNLPNNKVLIEKAREEAQRVLKEDPDLRENILL
KDLLIDNSNNKFIHDFLN
>PMM1713 recN, DNA REPAIR PROTEIN RECN, ABC transporter
MLIQLTLKNIALIEIIEINFEKGLNIFTGDSGSGKSLILDSLNVLFGGSN
IPLNHLIRPGKEECLIEAKFSNSSQVTDWFSKNGFYKISGEIFVKRKSYI
KNNKILSKYTINNFSISKKLLEELGLLLVDFAGQSDSVLYDNQDYRRSII
DDLGSKELKTINFEIKNMWQEFQNLRKRRQDMMHSYKQKEENNFVIKEMY
KVLEEANLNSGNEIFELQSKELRLSNNFDINNSIQLSLDNLNSYKNEAPS
ISYLIAQSIKQLSKVVQYDSKIKDLYENLMNIQSDVENLIFALTEYSEEL
ENEDISLEEIQKRLFYLQNLERTFSLELPKLILKKDELKKFVDTNLFEEE
IKTLDIQINNSQANLNTLFEVQSFQRRKTAYQLQDSVISILKNLGLENAD
FSIKFSKVTASSEGNENIDFLFSANPDQKLAPLSKVISGGEMSRFLLAIK
SSISQKPNTFFLDEIDNGLSGKSLHSLVDLIKLTAQERQVLCITHQPFLA
ATGNTHFKVKKNVINGITFTSITKLITKKERQNELIELIGGGFSEANNYA
STLIDRAAA
>PMM1097 recR, RecR protein
MITFTKPLSKLIGHFEKFPGIGPRTAQRLALFILKQPESSIRDFSKALLE
AHSNVGHCKKCFNLTSEEECEICRNTERNQKIICVVAETKDLLALERSRE
FKGTYHVIGGLISPMDSISPELLEIRSLVERVSKSDIDEIILALTPSVEG
DTTSLYIGKLLTPFTKVTRIAYGLPMGSELEYVDEVTLARALEGRTNLI
>PMM0200 rnhA, possible ribonuclease HI
MNSQQNIAIEAATDGACSGNPGPGGWGGLIIFNDNSELEIGGSEENTTNN
RMELTAAIKTLEKLKDFQLKENFKLRTDSKYVIEGYTKWIINWKRNGWKT
SAGKSVQNLDLWQKIDNLRIKGLVMEFVKGHSGDKQNERVDLIATSYSKG
IPLVGEVKKSFEAIDFSKKKETNKIQKLFSKNELLEQFAQKKYFLNSSEL
NELLGEESYILVEKYELFEWRNWRLIPKNQKYWIIENINT
>PMM0942 ruvA, putative holliday junction DNA helicase RuvA
MISWIKGELVSSWQANNKFYILVNCQGLGYEIQTLESVFFDINSNKISEK
EIILWLKHIKKEDSDMLFGFSTKDQRDFFIQILNIKGIGSQIGMSLLNKF
SLNQLITAISNNDKKSISTVQGIGQKMTERIILELKSKVINKEIEKENLN
INNFLEKNKDLDSIFKDIDLTLQSLNYSKKEIKNLFPKLINNIKNSSLEK
ESISFENLLKEAMNYLDHK
>PMM1615 ruvB, Holliday junction DNA helicase RuvB
MAIISSSLDESNIPRSRKELRLVDSKIIAEEKINKNLNLARPNSFKEFIG
QEQIKSSLKIAIEASKYRKEALEHTLLYGQPGLGKTTLALLISYEMNTKC
KVASAPSLERPRDIVGLLLGLKEGEILFIDEIHRLNKLTEELLYSAMEDF
RLDLTMGANRGTRCRTINLPKFTLIGATTKLASISAPLRDRFGLCHKIEL
YSNDELHQIIFNFATLINLQLENDACSALAKISRGTPRIALRLLKRVRDY
AQVIKNTNKISLEIIEKALNSQKIDNKGLDNIDRKFLSFLNLNNNHPIGL
DSIAAGLGEESSMLEFVVEPYLIQIGFIMRTPRGRKLTSLGKKYISSRNE
KY
>PMM1054 ruvC, Crossover junction endodeoxyribonuclease RuvC
MRIIGIDPGLGRVGYGIIEIQNEKKIFLDCGVIETNKNKGEGDRLYEIFN
DLNTLIDQWKPDIAAVEKFFFYRSSTTISVVQARGVIMMVFAFKSIKVSE
YAPSQVKLTIAGSGKASKKEVIEAVMYNLNLTRAPKPDDSADALAIALTK
LNEEGFN
>PMM1623 ssb, single-stranded DNA-binding protein
MEINTINLVGRAGREPDVRYFESGSTVANFTLAVNRISRGDEPDWFNLEI
WGKQAQIAADYVKKGSLIGITGSFKIDSWKDKNTGEDRFKPVVRVDRLNL
LSSKKETDNSNFSNNNNSGDIPF
>PMM0436 topA, Prokaryotic DNA topoisomerase
MDHTLVIVESPTKAKTIRRFLPPNYEVLASMGHVRDLPKGAAEIPASVKK
EKWSRIGVNTTEDFEPLYIVPKEKKKVVKDLKNALKDATQLLLATDEDRE
GESISWHLMQILKPKIPTKRMVFHEITKKAINKALDETREIDMELVQAQE
TRRILDRLFGYELSPLLWKKVAPRLSAGRVQSVSVRLLVNKERERRAFKK
ASYWGLKATLLKDNISFESKLFSLNAQKISNGSDFDEKTGNLKKGNKSLI
LNEDRAKSLLKTLSKEKWKVLRVEKKPTIRKPVPPFTTSTLQQEANRKLR
LSARETMRCAQGLYEKGFITYMRTDSVHLSEQAIRAARECVNSKYGKEYL
SSSARQFNSNARNAQEAHEAIRPAGEVFKTPNDTDLSGRDLSLYELIWKR
TVASQMAEAKLTMINAEIEVGEGLFKSSGKSIDFAGFFRAYVEGSDDPSA
SLEQQEVILPDLTQGSVLEVDSKEATYHETKSPARYTEAALVKVLEKEGI
GRPSTYASIIGTIVDRGYANISSNSLSPTFTAFAVTALLEEHFPDLVDTT
FTAKMESSLDEISSGNLEWLPYLETFYKGKNGLEVKVQKTEGDIDGKAYR
QVDFDDLPCVVRIGSNGPWLEGVKIDESGNEIQAKGNLPMDITPGDLDKK
KVDQILSGPSDLGTDPKTGEQVFLRFGPYGPYVQLGNTEEDKAKPRRASL
PKELKTDDLTLLEALELLSLPKLLGEHPEGGIVEADRGRFGPYIKWIKNE
DESENRSLKKEDDVFKVDLKRALEILAMPKLGRGGQEVIKDFGKPKELKD
KIQILNGRYGLYIKCGKTNVSLPKDTDLEKFTLDNALVLLEEKMKDKNSS
VFKKNKVISKKTLKNKKSKK
>PMM0937 umuC, putative UmuC protein
MKSKSSNTEAIALIDANNFYASCEQSINPNLRNKPVVILSNNDGCIIARS
PEARALKIKMGIPYFKVKESLNNLGVAVLSSNYSLYGDMSKRLMNLLKDY
SEEIEIYSIDEAFISILRPKDKNLNPWARKVRCLIYQNLGITLTIGIAEN
KVRAKIANNLAKNIDSSAGIFDLARIYNDNDYLRKISVEKIWGIGKQTSN
WLQSKGIKNAKEFRDMDEDEIIKKLGIIGKRLQMELKGNKCLPIEIIKKP
KKEIQVSRSFGKPITKLEDLTQALAIYAIKASEKMRSQSLKSSAITIFVR
TSHYSNHPYHKSAYKKLINATDNTSTILKTVLALSKEIYTPEYKLSKAGV
LMQDLTNCKYLQQSIINYESQEESKKSIRLMKTIDSLNKKFNNEVITWAI
TKKPQEWAMNRNSLSSGSTTDIRKIPNIMI
>PMM1712 uvrA, Excinuclease ABC, A subunit, ATP/GTP-binding site motif A (P-loop):ABC transporter
MVKKNIGINEDNSIKIRGARQHNLKNIDLTLPRNKFIVFTGVSGSGKSSL
AFDTIFAEGQRRYVESLSAYARQFLGQVDKPDVDNIEGLSPAISIDQKST
SHNPRSTVGTVTEIQDYLRLLFGRAGEPHCHHCGLPIAPQTIDEMVDQIV
LLPEGTRYQLLAPVVRGKKGTHAKLLSGLAAEGFARVRINGEVRELADSI
ELDKNHTHNIEVVVDRLIAREGIQERLNDSLQTCLKRGDGLSIVEVVPKK
GETLPPNLDKEKLYSENYACPIHGSIVEELSPRLFSFNSPYGACPDCHGI
GYLKKFTADRVIPDPSLPVYAAIAPWSEKDNTYYFSLLYSVGQAYGFELK
TPWKDLSDLQKNVLLSGSDKPIVIQADSRFKGTSGFERPFEGILPILERQ
LTETNGESVKQKLEKYLELVPCKTCSGKRLKPEALAVKIGPYSITDLTSI
SISETLFNIEKIMGLSKNIKENISLSEKQKQIGELVLKEIRLRLKFLINV
GLDYLTLDRPAMTLSGGEAQRIRLATQIGAGLTGVLYVLDEPSIGLHQRD
NDKLLETLKNLRDLGNTLVVVEHDEDTMKSADYLVDIGPGAGVYGGEIIA
KGSFEDVLNSKKSLTGAYLSGRKSIPTPKERRSSVKKSLILNNCVKNNLK
DISVEFPLGRLVSVTGVSGSGKSTLVNELLHPALSHSLGLKVPFPKGVKE
LKGIKAIDKVIVIDQSPIGRTPRSNPATYTGAFDPIRQLFTATVEAKARG
YQAGQFSFNVKGGRCEACRGQGVNVIEMNFLPDVYVQCDVCKGARFNRET
LQVKYKGFNISDVLEMTVEQAAETFSAIPQAADRLSTLVDVGLGYVKLGQ
PAPTLSGGEAQRVKLATELSKRATGKTLYLIDEPTTGLSFYDVHKLMDVI
QRLVDKGNSVVVIEHNLDVIRCSDWIIDLGPDGGDKGGEVIVEGTPEDVA
KHPISYTAKYLKEALN
>PMM1649 uvrB, Excinuclease ABC subunit B (UvrB)
MNNYKLQAPYQPNGDQPKAIKKLVQGVNSGEEFQTLLGATGTGKTFTIAN
VIQQTGRPALILAHNKTLAAQLCNELRQFFPKNAVEYFISYYDYYQPEAY
VPVSDTYIAKTASINEEIDMLRHSATRSLFERKDVIVVASISCIYGLGIP
SEYLKAAVKFAVGESIDLRSSLRALVDNQYTRNDTEITRGRFRIKGDVLE
IGPAYEDRLIRIELFGDEIEAIRFVDPLTGEILESLDQVSVYPAKHFVTP
KERLDSAISAIRNELKEQLDKFAYEGKLLEAQRLEQRTKYDLEMLREVGY
CNGVENYARHLAGREEGTPPECLIDYFPKDWLLVVDESHVTCPQLHAMYN
GDQARKKVLIDHGFRLPSAADNRPLKCEEFWEKSRQTLFISATPGQWELD
QCEGKFIEQVIRPTGVLDPIIDVRPSDGQIDDLLSEIRVRAKKNQRVLVT
TLTKRMAEDLTDFLSDNKVRVRYLHSEIHSIERIEIIQDLRLGEYDVLVG
VNLLREGLDLPEVSLVAILDADKEGFLRAERSLIQTIGRAARHVEGVALL
YADNFTESMKRAISETDRRRTIQKKYNQINGITPKPAGKKIENSILSFLE
LSRKLDTGGLSKDLINIVSNKTDDILNAKDNQCLLDEMPSLIDKLENKMK
DAAKELNFEEAANLRDRIKKLRQKLSRNT
>PMM0882 uvrC, Excinuclease ABC subunit C (UvrC)
MINPSTKVSTKVLDKKYNFKIEYKLIKNKDLLKSRLSEIPKSSGCYLFKD
IDNNLLYIGKSKTLRNRVSSYFNNYAELSPRLSLMVRQITEIEIIVTDSE
YEALNLESNLIKTNKPYFNILLKDDKKYPYLCITWSEQYPRIFITRKRRN
RNNFDRYYGPYVDVGLLRKTLFIIKKIFPLRQRPRPVYKDRTCLNYSIGR
CPGVCQEIISSEDYKKTMKQVSMIFQGRNDDLEVFLERKMNQYSNDLEFE
NAAKIRDQISGLKLLTESQKISIPDSSINRDIFGIVSENNISSIQIFQMR
SGKLIGRIGYTQKIDNSDETEILQRVLEEHYINVEGVEIPSEILLQFNLP
KHNTIEEWLSELRQKKVKLIIPKRNKKFETVEMVLKNAKLELERILNGIQ
DNESSIEDLTQILELTNQPRRIEGYDISHIQGTDPVASQVVFIDGIPSKQ
NYRKYKIKDPNIFIGHSDDFASIYEVIYRRFKKWSKFKIDGGDISSLQDK
KKSTLENDLLTDWPDLIMIDGGKGQLNAALKALTQLDLHEEVNICSLAKK
NEEIFIPGFSKSLDTDQNQKGLLLLRRVRDEAHRFALSFHRNKRSARMNR
SQLSQIPGLGPSRIKDLLEHFNSIDAIRIASREELSKVKGLGMHSANDIY
NYFNEL
>PMM0304 uvrD, UvrD/REP helicase
MHQTNNFLFKSLNNAQLNAVKHINGPLLVVAGAGSGKTKALTHRIANLIE
NNSVDPHNILAVTFTNKAAKEMKARLQVLLAQEIALNQFGQPWSTLKEFD
QNQLRTNIDQERLRDLWIGTFHALFSRLLRYDIEKYQDPEGLTWTRQFSI
YDETDSQTLVKEIVGQDMSLDPKRFDPKKIKRAISNAKNQCFTANDLEEK
ADNHFDKVIADAYRRYRISLSKNNALDFDDLLLLPVFLLRQNDLVRDYWH
KRFQHVLVDEYQDTNRTQYELIKLITAGNTEPNKFCEWNDRSIFVVGDAD
QSIYSFRAADFRILIGFQEDFKNSSNNNQKASLVKLEENYRSSSNILTAA
NSLIENNTERIDKVLRSTREEGELLKLLSCDDEISEAEAITTKLRSLNNY
NNQPIWKNFAILYRTRAQSRVLEESLVRWRIPYTIFGGLRFYDRREVKDA
VAYLKVLVNSSDNISLLRIINVPRRGIGKTTIQKLNELSNKLNIPLWEVI
NDKQSLDETIGRSSKGINKFTELMNDLLCYIENSGPAQILQLILEKSGYL
SDLLTSGSEESEDRRNNLQELINAATQFEEETENPDVEGFLSTAALTTDN
DTKKNHPNSVTLMTLHNSKGLEFQNVFITGLEQGLFPSHRSIDTPSLLEE
ERRLCYVGITRAKERVFLSHARERRLWGGMREATIPSIFLSEIPEELIDG
ELPQSGGASIRRDRHLDRLTRVDRKDLNESINRPINAVRKLYSGPSKGKS
WLIGDKVIHSKFGKGEIIHIFGSGEKISLAVKFGDKGSKILDPRLAPIRA
IN
>PMM0484 xthA, exodeoxyribonuclease III
MLIATWNVNSVRTRLSQIINWIKEVNPDILCLQETKVIDDAFPSSHFEEL
GYEVIIHGQKSYNGVAIISKFKIENVKKGFTNENKTGGISIDINEQKRLI
SAEINGLKIINVYVPNGSSIDSEKYDYKIQWLNYLSAFLDDQVKNDDLVC
LVGDFNIAPSEIDIHTPQKYEGGIMASKIEREALNNVLKGRFIDSFRIFE
KNTGHWSWWDYRNNAYELNKGWRIDHIYISKNLSSKLKSCVIERNQRENL
QPSDHAPVLINLEIDSHYEDYLDVDDDLFEI
>PMM0077 yrvN, putative ATPase, AAA family
MESDNLFSNTYRIESNAPLADKLRPKNLDDFFGQESILGHDSLLRNAILN
DKVGNIIFSGPPGVGKTTLIEIISSNTRSSLIKLNAVLSSIKELRTEIAN
AKERLRSSNRKTILFIDEVHRFTSVQQDALLPSIENGTITFIGATTENPF
FAVNKALISRARIFSLLPLNKNDLKKIIDKVIKYYSCLKDSKVVEIKEEA
INHLIKFSGGDARNLINALELGISITKENKENLVVIDLAIAEDSIQKKNI
VYDKNGQNHFDVISAFIKSIRGSDPDATLYWLANMVEAGEDPNFIFRRLL
ISACEDIGLADPNAIVVVQSCCDAFDRVGFPEGLFFLSQASLYLAISPKS
NSTKSIFKALEAIKATNVSLVPNHLKNNASNYLNPHNYQGKWLQQEYLPT
DLQGIKFWKPKDSGWEKNKYEDLPKKQKS