TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-04 20:37:59

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Bordetella bronchiseptica, RB50

Number of genes found: 138

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Bordetella bronchiseptica, RB50
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BB2840 Conserved hypothetical proteinchromosome CDS3005221 1026 + 0.752437
NA BB1851 putative exonucleasechromosome CDS1959184 744 + 0.678763
NA BB3509 phage-related conserved hypothetical proteinchromosome CDS3747660 684 - 0.69152
NA BB4832 conserved hypothetical proteinchromosome CDS5142717 834 + 0.695444
NA BB2492 transposasechromosome CDS2646061 261 - 0.551724
NA BB3744 hypothetical proteinchromosome CDS3968063 588 - 0.697279
NA BB4515 conserved hypothetical proteinchromosome CDS4812799 534 + 0.786517
NA BB3909 conserved hypothetical proteinchromosome CDS4151976 1380 - 0.676087
NA BB4137 hypothetical proteinchromosome CDS4401461 222 - 0.612613
NA BB0497 hypothetical proteinchromosome CDS525735 3117 - 0.526147
NA BB2185 integrasechromosome CDS2336592 990 + 0.632323
NA BB0500 putative integrasechromosome CDS530239 366 - 0.63388
NA BB2061 conserved hypothetical proteinchromosome CDS2205416 900 - 0.637778
NA BB2639 conserved hypothetical proteinchromosome CDS2800378 780 + 0.641026
NA BB3737 conserved hypothetical proteinchromosome CDS3962288 456 + 0.732456
NA BB0912 type III restriction-modification system methyltransferasechromosome CDS976070 1842 + 0.538002
NA BB3510 phage-related hypothetical proteinchromosome CDS3748340 942 - 0.654989
NA BB2210 phage-related conserved hypothetical proteinchromosome CDS2351285 684 + 0.69152
NA BB0908 putative helicasechromosome CDS968645 3288 + 0.564173
NA BB0914 putative integrasechromosome CDS981172 714 - 0.616247
NA BB3808 bacteriophage-related DNA polymerasechromosome CDS4033621 729 - 0.750343
NA BB3412 putative methypurine-DNA glycosylasechromosome CDS3657353 717 - 0.718271
NA BB3461 conserved hypothetical proteinchromosome CDS3705109 585 - 0.767521
NA BB1736 DNA-3-methyladenine glycosylasechromosome CDS1824189 645 + 0.666667
NA BB0920 putative membrane proteinchromosome CDS992791 948 - 0.621308
NA BB0017 putative membrane proteinchromosome CDS20757 1233 + 0.716139
NA BB1661 integrasechromosome CDS1765780 960 - 0.592708
NA BB4601 putative primosomal proteinchromosome CDS4900495 2103 - 0.719448
NA BB3087 conserved hypothetical proteinchromosome CDS3290681 1386 + 0.76912
NA BB3606 shufflon-specific DNA recombinasechromosome CDS3833598 1002 + 0.642715
NA BB3297 conserved hypothetical proteinchromosome CDS3529310 618 - 0.684466
NA BB3543 phage integrasechromosome CDS3762261 1224 + 0.655229
NA BB3418 conserved hypothetical proteinchromosome CDS3662513 735 - 0.770068
NA BB4153 putative hydrolasechromosome CDS4414218 660 - 0.668182
NA BB3647 phage-related conserved hypothetical proteinchromosome CDS3862724 1776 + 0.643018
NA BB3017 conserved hypothetical proteinchromosome CDS3221677 780 - 0.667949
NA BB2496 putative exodeoxyribonuclease IIIchromosome CDS2650557 783 - 0.671775
NA BB2436 conserved hypothetical proteinchromosome CDS2589550 468 + 0.728632
NA BB3600 probable ATP-dependent helicasechromosome CDS3824971 2076 - 0.703757
NA BB4404 conserved hypothetical proteinchromosome CDS4690699 402 - 0.689055
NA BB2053 hypothetical proteinchromosome CDS2198881 282 + 0.592199
NA BB0398 conserved hypothetical proteinchromosome CDS411642 546 + 0.602564
NA BB2845 Putative ATP-dependent DNA-ligasechromosome CDS3008333 2463 + 0.72838
NA BB3607 modification methylasechromosome CDS3834602 792 - 0.585859
NA BB2322 hypothetical proteinchromosome CDS2472130 675 - 0.567407
NA BB0906 putative integrasechromosome CDS966029 1212 + 0.617162
NA BB1810 probable ATP-dependent DNA helicasechromosome CDS1911214 2094 + 0.711557
NA BB1436 conserved hypothetical proteinchromosome CDS1527726 2661 + 0.745209
NA BB1812 putative nucleasechromosome CDS1914453 639 + 0.749609
NA BB3086 conserved hypothetical proteinchromosome CDS3289957 708 + 0.745763
NA BB1668 modification methylasechromosome CDS1769786 1935 - 0.660465
NA BB3048 possible exonucleasechromosome CDS3254022 1122 - 0.729947
NA BB3088 putative DNA polymerase III alpha chainchromosome CDS3292075 3159 + 0.709718
NA BB0190 putative integrase/recombinasechromosome CDS196476 981 - 0.741081
NA BB0942 conserved hypothetical proteinchromosome CDS1018673 621 - 0.692432
NA BB4534 putative endonucleasechromosome CDS4831538 789 + 0.646388
NA BB1235 DNA-3-methyladenine glycosylase 1chromosome CDS1327161 660 - 0.74697
NA BB3047 putative GTP-binding proteinchromosome CDS3251380 2646 - 0.742252
NA BB4007 ATP-dependent DNA helicasechromosome CDS4256119 1821 - 0.69687
NA BB4839 conserved hypothetical proteinchromosome CDS5151544 765 + 0.726797
NA BB3442 conserved hypothetical proteinchromosome CDS3685560 726 - 0.687328
NA BB2300 putative deoxyribonucleasechromosome CDS2430141 828 + 0.707729
NA BB0307 putative DNA methylasechromosome CDS311072 2196 - 0.722678
NA BB2192 phage-related DNA recombination proteinchromosome CDS2340970 987 - 0.654509
NA BB4138 phage-related integrasechromosome CDS4402025 1275 + 0.636863
NA BB3446 conserved hypothetical proteinchromosome CDS3688796 1275 - 0.687059
NA BB3941 DNA repair proteinchromosome CDS4189187 1662 + 0.711793
NA BB3983 putative ATP-dependent RNA helicasechromosome CDS4232973 1272 - 0.690252
NA BB2056 putative exported endonuleasechromosome CDS2201949 741 - 0.672065
NA BB0209 putative ATP-dependent RNA helicasechromosome CDS215743 1725 - 0.707246
NA BB1560 putative lipoproteinchromosome CDS1664839 681 - 0.69163
NA BB4061 conserved hypothetical proteinchromosome CDS4319864 702 + 0.726496
NA BB0818 hypothetical proteinchromosome CDS861007 1179 + 0.778626
NA BB2209 phage-related hypothetical proteinchromosome CDS2350347 942 + 0.654989
NA BB3691 conserved hypothetical proteinchromosome CDS3911789 1500 + 0.724
NA BB1437 putative nuclease/helicasechromosome CDS1530399 3405 + 0.735683
NA BB4410 conserved hypothetical proteinchromosome CDS4695105 1626 + 0.707872
NA BB3403 putative ATP-dependent helicasechromosome CDS3644022 3885 - 0.695495
ada BB1234 O6-methylguanine-DNA methyltransferasechromosome CDS1326026 1077 - 0.744661
alkB BB4662 alkylated DNA repair proteinchromosome CDS4959069 651 + 0.728111
bph2 BB3374 DNA-binding protein Bph2chromosome CDS3604906 339 + 0.637168
dbpA BB4367 probable ATP-dependent RNA helicasechromosome CDS4647674 1389 - 0.676746
dinP BB3093 DNA-damage-inducible protein pchromosome CDS3299031 1086 - 0.697053
dnaA BB4989 chromosomal replication initiator proteinchromosome CDS5310125 1443 - 0.638254
dnaB BB1919 DNA helicasechromosome CDS2039773 1374 + 0.661572
dnaE BB3401 DNA polymerase III alpha subunitchromosome CDS3639361 3492 - 0.669817
dnaG BB3162 DNA primasechromosome CDS3374239 2031 - 0.677991
dnaN BB4988 DNA polymerase iii, beta chainchromosome CDS5309013 1116 - 0.637993
dnaQ BB4275 DNA polymerase III, epsilon chainchromosome CDS4551958 735 - 0.670748
dnaX BB1438 DNA polymerase III subunit Tauchromosome CDS1534372 2232 + 0.723118
fis BB4000 DNA-binding proteinchromosome CDS4249847 240 + 0.620833
gyrA BB3473 DNA gyrase subunit Achromosome CDS3716894 2634 - 0.65186
gyrB BB4987 DNA gyrase subunit Bchromosome CDS5306465 2454 - 0.662184
holA BB3379 putative DNA polymerase III, delta subunitchromosome CDS3610494 1056 + 0.738636
holB BB2638 DNA polymerase III, delta' subunitchromosome CDS2799285 1053 + 0.74264
hup BB3653 histone-like DNA-binding proteinchromosome CDS3867544 282 + 0.631206
hupB BB1979 DNA-binding protein Hu-betachromosome CDS2117579 273 + 0.626374
ihfA BB2042 integration host factor alpha-subunitchromosome CDS2190913 342 + 0.654971
ihfB BB3466 integration host factor beta-subunitchromosome CDS3709424 333 - 0.636637
ligA BB3804 DNA ligasechromosome CDS4025309 2091 - 0.693448
mfd BB3818 transcription-repair coupling factorchromosome CDS4042642 3456 + 0.686343
mutL BB4058 DNA mismatch repair proteinchromosome CDS4315691 1890 + 0.721164
mutM BB0897 formamidopyrimidine-DNA glycosylasechromosome CDS957012 732 - 0.726776
mutS BB1660 mismatch repair proteinchromosome CDS1763126 2598 - 0.708237
mutY BB4453 putative A/G-specific adenine glycosylasechromosome CDS4745871 1077 + 0.732591
nth BB3785 endonuclease IIIchromosome CDS4008423 636 + 0.650943
nudC BB4301 NADH pyrophosphatasechromosome CDS4578737 735 + 0.707483
nudH BB4231 putative Nudix hydrolasechromosome CDS4506266 573 - 0.600349
ogt BB4513 methylated-DNA--protein-cysteinemethyltransferasechromosome CDS4811225 573 - 0.724258
ogt BB4663 methylated-DNA--protein-cysteinemethyltransferasechromosome CDS4959740 588 + 0.72619
parC BB3227 topoisomerase IV subunit Achromosome CDS3445950 2316 - 0.689983
parE BB3229 topoisomerase IV subunit Bchromosome CDS3448894 2013 - 0.675112
polA BB3239 DNA polymerase Ichromosome CDS3465318 2715 - 0.67477
priB BB1915 primosomal replication protein nchromosome CDS2037664 324 + 0.635802
radC BB3258 DNA repair proteinchromosome CDS3488347 678 + 0.730088
recA BB2076 RecA proteinchromosome CDS2221376 1062 + 0.642185
recG BB2939 ATP-dependent DNA helicasechromosome CDS3122138 1992 - 0.713855
recJ BB2296 single-stranded-DNA-specific exonucleasechromosome CDS2425470 1569 - 0.725303
recR BB1440 recombination protein RecRchromosome CDS1537026 609 + 0.689655
rep BB4600 ATP-dependent DNA helicasechromosome CDS4898383 2070 - 0.66715
rhlE BB4914 putative ATP-dependent RNA helicasechromosome CDS5223306 1446 + 0.71231
rnhA BB4278 ribonuclease HIchromosome CDS4557048 468 - 0.683761
rnhB BB2619 ribonuclease HIIchromosome CDS2782168 606 + 0.711221
ruvA BB4003 holliday junction DNA helicasechromosome CDS4252374 573 + 0.685864
ruvB BB4006 holliday junction DNA helicasechromosome CDS4255041 1074 + 0.695531
ruvC BB4002 crossover junction endodeoxyribonucleasechromosome CDS4251745 549 + 0.723133
smf BB0244 conserved hypothetical proteinchromosome CDS248017 1113 - 0.751123
ssb BB0077 single-strand binding proteinchromosome CDS74305 501 + 0.680639
topB BB4960 DNA topoisomerase iiichromosome CDS5276718 2628 + 0.66172
ung BB0210 uracil-DNA glycosylasechromosome CDS217706 753 - 0.699867
uvrA BB0075 excinuclease ABC subunit Achromosome CDS69874 2859 - 0.678559
uvrA2 BB4032 putative excinuclease ABC subunitchromosome CDS4283196 5718 + 0.691326
uvrB BB2273 excinuclease ABC subunit Bchromosome CDS2403569 2028 + 0.662722
uvrC BB3343 putative excinuclease ABC subunit Cchromosome CDS3569749 1740 - 0.679885
uvrD BB2178 DNA helicase IIchromosome CDS2324960 2301 + 0.663625
xerD BB1429 integrase/recombinasechromosome CDS1521919 933 + 0.717042
xseA BB2011 exodeoxyribonuclease large subunitchromosome CDS2148016 1392 + 0.733477
xseB BB1910 exodeoxyribonuclease VII small subunitchromosome CDS2032964 267 + 0.685393