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# Bordetella parapertussis 12822, 12822

>BPP1642 conserved hypothetical protein
MLAPERIHPALWRATQLAHGPTRKLPTGYADLSAQLPGGGWPLGALVELL
LPQPGSGEIRLLRPALAQLEARRAIALVQPPHAPHIASWASWRLDPRQLL
WVAPERPADALWAAEQILKAGSCAALLCWLPQVRPESLRRLHLAAQGGDA
LFVALRPAAAERHASPAVLRLALAPAPGGLSIRIVKRRGPACEHPVHVGL
EAGAGLSVFPAPHAPLDRRLPAQPVAGRRTPALVS
>BPP3572 ATP-dependent DNA helicase; putative ATP-dependent DNA helicase
MSDPRALGVLARVFGYESFRGDQQAIVDHVIGGGDALVLMPTGGGKSLCY
QVPALVREGTGIVVSPLIALMQDQVDALTELGVRAAFLNSTQDWRVAREV
EQAFLAGELDLLYVAPERLLTDRCLQLLERGRIALFAIDEAHCVSQWGHD
FRPEYLGLSMLHERWPEVPRIALTATATAATRSEIAQRLALDEARHFVAS
FDRPNIRYRIVEKNEVRRQLLDLIRSEHEGESGVVYGLSRARVEETADFL
CANGVNALPYHAGLSPAVRAANQARFLREDGIVMVATIAFGMGIDKPDVR
FVAHIDLPKSVEGYYQETGRAGRDGLPASAWLAYGLQDVVQQRRMIDESP
GDDAYRRRLGQQLDAMLGLCETVECRRVCLLAYFGQTITACGNCDVCLEP
PQAWDGTVAAQKVLSAVYRLWKERGQRYGAGHIIDILRGKSTDRTRQHDH
ETLSVFGVGADLSENAWRGVLRQLLAQGLLAVDHEGFGTLALTEGSRAVL
KGEHQLMLRREAEKKPRGSRAGARARPDPIDLPAEAKPVFESLRSWRGEV
AKSNGVPAYVIFHDATLREIALARPESLDDLSHISGVGARKLEAYGEEIL
RCVQRP
>BPP3548 putative ATP-dependent RNA helicase
MTESTSSDAPVTDAPTRTFADFGLHPLLLKSIADTGYTNPTPIQAQAIPV
VVEGRDVMGAAQTGTGKTAAFTLPILHRLMPLANTSASPARHPVRALILT
PTRELADQVYESVKRYSLHTPLRSAVVFGGVDIGPQKEALRRGCEVLVAT
PGRLLDHVEQKNVNLSQVGILVLDEADRMLDMGFLPDLERIIRLLPAQRQ
GLLFSATFSNEIRKLGRSYLNHPVEIEVAARNATADTVTQIAYQMHGDTK
RAAVVHLVKSRGLKQVIVFSNTKIGTARLARQLERDGVKAESIHGDKTQG
DRMKALEAFKAGDLEVLVATDVAARGLDVAGVPCVINYDLPYNAEDYVHR
IGRTGRAGASGEAIALFTADEERYLLDIEKLIKRQVPRGKLELPADLVAR
SHGRDRDAPRERGADRHRGERRTSGAAAPRQPVDELFYKPYEPANGQPAS
PETPKQEGRSNAPKRQLAVLLGGSRKG
>BPP0078 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP1705 putative ATP-dependent helicase
MPGSTDISSMPEASRPPERAAAARSEPRPERPIPAISYPEDLPVSARRQE
IARAIAAHQVVIVSGETGSGKTTQLPKICLELGRGRRKMIGHTQPRRLAA
TSVAKRIAEELRTPMGEVVGYQVRFNDRTGPNASIKLMTDGILLAESQRD
PLLRRYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDAE
RFARHFAAGPERPAPVIEVSGRLYPVEVRYRPVQPPMSDEAAAAPAKGGR
ERSAGDEERDLIDAIVDAVDECARHGPGDVLVFLPGEREIRESAEALRKR
HPVGTEVLPLYARLSQAEQEQIFHPSGNARRVVLATNVAETSLTVPGIRF
VVDSGLARVKRYSWRNKVEQLRIEPVSRASANQRAGRCGRIGPGLCIRLY
DETDFNARAPFTDPEVLRSSLASVILRMKSLKLDDIEQFPFVEAPPGRAV
ADGYHLLQELGAIELAGDGEAAEAGGGGAAFRLTRTGQELAKLPVDPRIG
RMILAAREQQCLAEMLIIAAALSVQDPRDRPMAEREAAESAHAKFADDKS
EFLSFLKLWRWYGEQVQHKASQRKLVALLRQNFLSPVRLREWHDVHTQLA
ALVGEQGWRLNQSEATYEQLHMALLSGLLGNIGFKGEEGGQYHGAREIRF
HIHPGSRLVKKAGRWIVAAELVETTRLYARCVARIEPVWLERAAAHLLRR
NWSDPRWEKKAGQVVANERATLYGLLVYNGRRVHYGRINPQHARELFIRQ
ALVPGEIDTRLPFVAHNRKLIAGIEKLEHQTRRPDILVDDELIYAFYDRQ
LPADISQTASLEKWVNGLDKAAAARLLLTRDELMRHEAAGVTTDVFPKKV
EWQGVAMPLDYHFEPGSPRDGVTLSVPLFALNQLDAQRCEWLVPGMLKEK
AHLLLKSLPQKLRRHCVPLPDYAAGFYERWYERQADPQQGLVDALIADMW
DQVQVRPAPGDFKLETLPAHLFMNFKVVDEHGRMLAAGRNLAQLKAELGK
QAQATFQQLAARDSDVAQALAHENLTSWSFGPLPEIMEIKRGGQSVIGYP
ALVDRGAHCDLDVFDDPDEARRHHRAGLLRLFRLALREQVKFLEKNLADL
TKMSMLYMALGTQEELRDQIIDCALAQACLAEPWPVNEQQFEARRQEGKG
RLGLLAQEVARMAHAILAEYGALQRKLPQARPHAAAYADLQQQLGVLMPK
WFVRDTPYAQLAHYPRYLKAAVARIDKLRADPARDARLMGEMAPILTQYQ
RARSALKGAPDPRLDEFRWLLEELRVALFAQELRTPMPVSVKRLMKAWES
LRR
>BPP2508 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP2931 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP2613 putative exported endonulease
MKYAVVLAALLSLPLAAQAELVTRPNAVGHRDFRHAKKVLPRVYQSLERD
FYCGCPYQGKRIDLQACGYAPRKQPRRAQQLEWEHVVPAWTLGHQRQCWQ
QRVNGKPGGRKHCGRTDPVFARAEGDLVNLVPSVGEVNGDRQNFRYAVWA
DRPAPMYGQCETIVDFKTRRIQPRKYVRGRIARIQFYMVERYRLKLSRED
RRVLCVWAHAYPVDDWERARDQRIRTLQGNGNHYVTDPAAIQRQCG
>BPP3937 conserved hypothetical protein
MTIANALQLELDEATCVLSAAYAPTGENDTLPTWDTLVAAVQARGWPATV
LDQISAIVFIEQCRDTAGPVEACIGEVRNGTFELEVAEDRMSAQLTLRAP
KGGQPVGESDLLAGLQAHGIVHGLIPEALRQALERGACEALEIARGTLPE
AGEPARFESLLDALKTRLSEDDENAIIDYRNLGDLTLVSAGTPLMRRIPA
TPGQPGTDVLGGPVAPPTVADPPFVPKLNGVEVDPEDPGLLRAAIAGSPM
LVQHGATVNSLVEVPAVDLSSGNIDFEGTLRVKGDITAGMHVRVSGDVVV
NGTIEAAHVEAGGNVTVNGGIIGSAEGVADSRGGSRMARIVSGGSVKARF
IDNAQVRAEKNVAAEREIRQSTVTAGETITVGPPGSQQGVITGGTAHAYK
SVHAGTLGSMAGIPTVVRAGLNPHANAKRAALETRARELEEEKAKLEKLI
LFLHNNPAKNVNNMSERARQTHAKISADLVELQAEDARLAKELQPLETAM
IVASRRFFGGVTLHLGVKVTEFLEDQVGGKAVLEQGELAIR
>BPP3054 conserved hypothetical protein
MTPTLVFDLETIPDVAGLRRLNDWGGEVSDLEVVERAFAARREAVGHDFL
PLHLHQVAVVGCVFRDDQGFRVKTLGQPDDPEAALLSGFFKTIERYTPRL
VSWNGSGFDLPVLHYRSLIHGVPAPRYWDTGDEDRDFKFNNYISRYHNRH
IDLMDLLAKYNGRANAPLDELAKLCGFPGKLGMDGSKVWEAWNQGKADEV
RAYCETDVVNTWLVYCRFRFLRGELDRVAYDAEIALVRDTLAASDAPHWK
EYLAAWDAA
>BPP2618 conserved hypothetical protein
MWFKNLKIYRLSAPWALNGDQLEECLARFAYQGGNNLEMQSLGWISPREN
GLLAHTLNGQILLTLRAEKKLLPTTVVNQVAKARAQEIEEQQGYKPGRKQ
MKEIKERVTDELLPKAFSIYRDTRVWIDTVNHWLVIDAAASAKADEVIGL
LAKTIDPLPLDNLYVEQSPAAAMTGWLAADEAPANFSIDQDTELRASGES
RAAIRYVKHSIDVDDVRRHIQSGKQCTRLAMTWADRVSFVLTESLDVKRV
APLDVLKENPDAATQNDDEKFDSDMTLMTGEVAKLLAELVDSLGGEKRV
>BPP2064 transposase for IS1002
MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKWLARFR
SEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSL
ATVARYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVG
HRITGDRAQNRNRGIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQ
ATAYYASLGVRIDRVMTDNGSGYVSRTFRAVCVELGIRHIRTRPYTPKTN
GKAERLVQTCLREWAYARPYTSSAERQAALQPFIDRYNWCRPHSALGHQP
PITRIPDVNNLLRIDT
>BPP2401 putative exonuclease
MPQMSYILYKTCLAAHRGLSRRRMPVGPAGRCFYCCFGINMAYFRRYTTP
HPYGQTLRAGAAAGRASAARDGLRALDGPFVVADLETTGLSVATCEILEF
AAVRVSACGQIEREFTQVVRTDGRVPPFISRLTGITQAEVERDGVPVRQA
FGDFLDFIEGGPLFFHNASFDRRFLQAAADRTGLPFEAQTHCTLMLARQA
WPELPSHKLNVLARHLGASEPTHRALADVRTTVAVALAARARLAAQG
>BPP2610 hypothetical protein
MRPRKFCDIEGDMDIQEQIAVIVHTVSHQGGRIDALHSTLASVLHLVKGS
PGLREAIEAHLEQSYANLLARSENPQYVAGFESVRDTVVAALK
>BPP0017 putative membrane protein
MPLSAASQHPRSPFAGAAPLAHRPLSAIAATAAGGVPQARIKRLLGELVP
QLASVHEQGHICGDITVDSVGLDESGRAHLLALNGAAQGEAALPAPGYAP
FELYVEDPAWPRGPWTDIYALSAVAHSLITGRRPPAAPERSVNDGYQPLA
QRDLPKYDNDFLRAIDAGLAVRPQARPHTLEAFVDSLKFPEPEPPAEAMA
PLPSEPPPRDEVRDEEPVRQRPAVRSILFAILLALAALGVAVYWWQRLTG
TPSGVITSSERVTTPGATATPSDSREAERPAAGAAPPQGGDAGSADTSAP
PAQAQAGPDAAPAPDVAPEGAATDAQAESEAAATPAPAAARVTVRINVQP
WGEIWINGVRRGVSPPMKELRLAPGRYSVVVRNADLPPYRATLEVKAGQP
ARITHVFQ
>BPP0490 putative DNA primase
MVLRRPSLSTAKPKLLSDQALARLRELPIADVASAVGITLRGNKAMCFNG
HDTATPSFTVSKARNTWRCFGCGEYGDAITLVQKIHGLRFMDACNWLCHH
FGIIGGDVPYGLRAHSLSRVTSPKPVNPLPSAPSTSPDFELYTWLVARCG
PVKASLGTTYLQTHGITPDLALRFGVVELIDPVRAYRELERHWGPDRIRS
AGLSGSRRALSWSGYALIFPFKFDAITQYLQVRCLQISRKFLGLSGIPKP
MFNSQRLSQLRPGSLLHICEGVPDAISMEGSGLAAVAVLGATSFRSEWVE
ELLPFDLVGVPDGDAAGEKFMKCLANEFRARSKSIRFVVPPEGMDASDVI
ARGKNA
>BPP2252 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLEKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPISRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP2054 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYKQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFSLKIRAA
FPGNAR
>BPP1690 conserved hypothetical protein
MPADTRARTERLAWREAPAGAMLYDAARIEAPGPALFDPSSYGAAAQPVA
AGGRQAAWFVATPGWQGVLRGYRRGGLAARVSRDAYVWQGEARTRGLREY
RLLAHMREQGLAVPAPLAAGYWRHGLTYRAAILVERIPAARPLASLLDEP
AWEAVARAIAAMHRAGVWHADLNAFNILLDPGGLAWLIDFDRGTAGGVSE
RGRQGNLARLRRSLVKVGGERGQAFWQRLEPAYRAAWARGTARA
>BPP4061 putative endonuclease
MLRITSLNLNGIRSAFRKGLQPWMTAHNADVLCLQEIKVSHDDLTDELRH
PPGYTGHFHHAEKKGYSGVGMYLRAGAERVVAGFDCEEFDAEGRILRADW
KDLSVISAYLPSGSSGDERQQAKYRFLDQFGPWLDGLMAEHRKTGREFVI
CGDWNIAHKEIDLKNWKGNQKNSGFLPEERAWLTEVFDRRGFVDVFRKLD
ERADQYTWWSNRGQAWAKNVGWRIDYQIATPGIAERARATSIYKDERFSD
HAPLTVDYDIAL
>BPP1254 hypothetical protein
MGWLTDNFGAPATATSEVEAAPAYHIYRAHAVQARQVDELIGLVKGVLAD
GAICQEEVAFLLRWMQTNQDASNKWPAKALYPRIAAALADGHMDAMEEAE
IMALLLATVGSEDAAGQPAINKSTALPLCSPVPDIHFDAHTFCFTGKFTS
GTRDWCSQQVVERGGSSLSNVTKKLDYLVIGELGNPDWLHSTFGLKIKKA
VDYRSSGVALRIISEQAWYEHLLS
>BPP2589 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP3707 putative hydrolase
MLASVVPELAFLSPRIMDPRTDFADGLTRCGWLDHSVDYVAYHDHEWGRP
QADDRALFEQLSLEGFQSGLSWRTILNKRAAFRRAFADFDMERVAAFDER
RVEALLQDAGIVRHRGKIEAVINNARRALALRDREGSLAAFFWRYEAPPR
GADAPFEVLACTAEFEALSKALKKQGWSFVGPTTVYAFMQSVGMVNDHHP
QCHHHAACEQARYRFQRPD
>BPP1220 putative nuclease/helicase
MTEPERLPHDHAARRQALDPSRSFLVQAPAGSGKTELLTDRILALLATVT
RPEEIVAITFTRKAASEMHARVLHKLSLGAGEPPRSAHERRSWELARAAL
ARDQEQGWHLLDHPARLAIRTIDSFCAGLVRGMPWLSELGGMPDIADDAR
AHYEAAARATLELADEHDAVRALLAHLDVDVQAAKEAIAAMLGQRDQWMP
LLQFGLDRDGLEASLAEALEHELDSLCGQLPRGWSQALCGPARLAAAALA
GSGDARLAALQDWDAPLPPMAEALDQWRALAHLLLTGTGALRSPKGVNKN
LGFPAGCDHKEPFTAWLAACDGGAPWVRALAAVRDMPDAYFSDAQWDVLS
AQLTTLALSVAQLRVQFARAGEVDFIEIAQRAAYALGSGDDPGELLLKLD
ASIRHLLIDEFQDTSQGQIDLLATLTAGWQDGDGRTLFLVGDPMQSIYRF
RKAEVGLFLQVAEQGVGQIRPGFLQLTDNFRSQGGVVDWVNRVFAQLLPR
ANDADSGAIAYSPSTAFHETAPGEAVRFHPAWECGDAASAERQAEDIVVG
LVRAALAEHEGSRHPVAILVRARSHLGSLTRRLAQEGIPCRAVELVPLGL
RPVVADLVQLARALAHPADRLAWLSVLRAPWCGLTLTSLQRLFGADQQTP
VPTLLERALRGAARSEGGQGSLFDAPAPGCLAEQALAPDEYRRLRAVAAI
LLDRANDAGLLPLAAWLEQLWRRLGGPGLYPGSSAASDAESLFQLIERLA
PHGGLDAGLLDTAVARLFAAPQATGEQGTVEIMTMHKSKGLQFDTVILYG
LHRAPRGDQAPLVRFEQSGGRVLLGPIKPRAETEADPVSRYLGAREARRA
AYETDRLLYVAATRARQRLHLVAHVAVDAASGQARTPASASLLGRLWLHL
PVPQPPDVAQDQAAATGEQPALVGEPLRRLAGAGLASLAARTLPREAAAG
AYGGGQGAEHPSWQLEAGYDAAVGTLAHAWLARIGGDGPQHWSADALAVR
LPAMRRQLTRAGIPAGQADAAAQAVLDTLQSTLDDERGRWLLGQARARRE
WPLIDAAGRVSVIDLALSTEDGWLIVDYKTGRPHEHETPEQFAIRMRQRH
GEQLMRYCAQVTALDGRPARAALYFPRARAWIDL
>BPP1219 conserved hypothetical protein
MSDDFRTDFPSCTLRDLGELPAIDTLVLTVNNRLSRRLTLDLAAQLRSER
QVSELPRIMPLSAWLADCAAELAFDERYEVPAYRLSSFATQLVWREAIRL
EEADRALLDADQAARLALDADLLVDEWQAHVPAGAETDEYRGFSRWRARY
RAMLGELDAEDANQGYERVLEALRQGALRAPRHVALAGFVDISPRFARLL
RALADGGADVVAWRDAVREPAWPQRFEAADRGAEWRAAARWAADRLRADP
RGRYAIVSPQLEAEAPFARRVLGQALAGQDAPLPFNVAVGRALDEWPAVR
AALAWLALLAEVAARGAAEPALFGAALLAGHCAGDLQEGPRHAALDARWR
RQALAHVGPADWQRGLEECPRLAEGWSQAMAIWQAGQRSDTCDAWAPRLK
AALTALGFPGERALDSVAYQVMGALGDLLAEFTALAPAAGRLDGRAAVRL
LASAARAGSFQPQRDPSARLDVLGLLEAEGGAWDGIWVLGLTGDVLPASP
KPNPLLPLAVLRQVGAPRATPEREREWAEGMFMALRRCAPEMIASHAAMD
GERELRPSPLIARAAPADWQPGADAQAAALEQEILDDSQGPPLEAERQSR
GGLDVLDTQARNPLWAFVRHRLGGRAMAPYADAATVSVRGQFLHRALELV
WRMLPDQEALHAAMAEGRLAALVEQAIGEAARTELAGYPAALRELECARA
TAVLANWFDSEAQRQPFEVAQIEQEHSWQRGALALKVRLDRMDRLADGRA
LIVDYKTGAAPGRPESDWARARPVNLQLPFYASVLADGADTEVAGLMLAQ
IHARQVSAQGLAADDLGIEGVTPVEQSKAFEGQPWPRILQRWRAAVEMLA
DEYANGYAANVALRQDDLKFCDAMPFLRLHLDDEDA
>BPP2649 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP3374 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLEKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPISRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP1021 DNA-3-methyladenine glycosylase 1
MTAATLSPAAYAHAERFLAGLDADWRGHVAATGPCLHRPLPAREPYEALV
RAIAYQQLHARAGDAIVGRLLALFPGGAFPAPGQLLAADPAALRACGFSA
AKTQTILGIAQAARDGVVPDRRAARRMSDQALVERLTTLRGVGRWTVEML
LIYTLARADILPADDFGVRDGYRRLKGAAATPTARQMRNIGQAWGPYRTL
AAWYLWRVPPEARIRAQET
>BPP3492 DNA repair protein
MLRTLHIRDFVIVEQTELHFGDGFTVFSGETGAGKSILIDALALTLGERG
DASMLREGAARADITAVFDAPPALRDWLAERELDSGDELALRRVIDSQGR
SRAYINGMPATIAQLRELGDGLVDIHGQHAHQSLMRPEAQRDLLDAHGGH
AELRQTVAQAWKQWRALARQLDTAEQDAEALAAERDRLQWQSDELDRLGL
GPDEWDALQTEHTRLSHAQSLLDGASRILEALDGEHDSAQYRLNGAAHQL
QQMLRHDPALQGIGDELESARIAITEAVSDLNNYVSRVELDPQRLADVEA
RLSAVFETARKFKCEPHGLPALRDSLHGKLAEMQAASDVQALRAQAEAAQ
ARYEAAAARLSAARRKIAKDLGKQVTQAMQTLSMQGGRFEAALTGGAPSA
HGSEQVEFLVAGHAGSTPRPLAKVASGGELSRISLALSVIASRAARVPTL
IFDEVDSGVGGAVAEAVGKLLRELGQRHQVLCVTHLPQVAACAHAQYRVS
KVESGGSTRSRIAELDAEARVEEVARMLGGIKITATTRDHAREMLGGHTA
PAA
>BPP3200 probable ATP-dependent helicase
MLDLDISEFFADDGPLARAMPGYRPRQSQVELAQAIDSAIAARATLVAEA
GTGIGKTWAYLVPAFAQGGKVLISTGTRTLQDQLFARDLPKVRQALAAPV
TAALLKGRGNYVCHYHLDRLQGDDRALKSRAEIGQLRQIQVFAGISKTGD
RAELAQVPEDADIWQRVTSTRENCLGQECPRIRDCFVVKARRQAQEADVV
VVNHALFMADLVLHEEGVTDLLPEVDTVIFDEAHQLPDTATRFLGSSVST
HQLLDFARTLEAAGLAYAREAAKWSDVGRQVETAARELRLACAPLERLPG
RKATFEAMPGPDEFDAALASLREVLDAAVRALSGVAEKHPDLAAAARAGA
EISVRLSRWATPPRHAAQAAEHDEGWGRDDQGVAVAAPSEALLAEAAAAA
NWSGPAVRWVEHGQHHVRLHAAPLSVAQAFSRYRKPGQAWILTSATLSVY
GDFGHFTQQLGLEDARTGRWESPFDYPAQGLLFVPRDMPEPQSPRFVERF
VENLLPLLEASPGGALVLCTTLRAVDKVAQLLTDAFADAGHDWPLLRQGE
ATRRDLLERFCKLEHPVLVGSASFWEGIDLPGDVLTLVAIDKLPFAPPDD
PVIEARLRACRLRGGNPFAEYQLPEAAISLKQGAGRLIRTETDWGVLMVG
DARLVEKPYGKRLWRGLPPFARTRDMNEALAFYARMGEAEP
>BPP4131 putative primosomal protein
MSDASSADPALPAADAAGVWVRVALDVPLPGPFDYRSAAPLPLGARVIVP
FGRRKLVGVVVEHPAQPSIDPAQVREVEQPLEDLPPMPADWMRLARFAAD
YYQRPLGEVMLPVLPPPLRKPSAYQGKRSGLGPVARLDARKPRAEAAVAA
EPDQAPELNEAQREAVDTIGALSAFQPVLLHGVTGSGKTEVYLHAAARVL
QAGRQVLLMVPEINLTPQLEGALRARLEALVGPQGVAILHSGLADGERVQ
AWARAQRGQARLLLGTRMAIFAPLPELGLIVVDEEHDPSYKQQEGLRYSA
RDLAIWRARDLDIPVVLGSATPSLESWQHAERGRYLRLTLPGRARASSLP
EIRLIDTRRLQLKQGLAPQFIEAIGQRLERGEQSLVFLNRRGYAPVLHCA
SCAWVSHCPRCSTFTVLHRGPGAGGYRLQCHHCGYQAPVPRACPECGDQD
LEPMGRGTQRIEEQLAEWFPQARIARIDADSTRRKGSAQALFAAVHAGEV
DIMVGTQMVAKGHDFARLGLVGVLNADSMLFAHDFRAPERLFAQLMQVAG
RAGRHAAGAQVLIQTGYPEQPVYQALLRHDYAGFARHALQEREDTGLPPF
AYQALLTAEARELTVAQGFLQRARDLATGEPWPGVDAITLYDPVPLRVVR
VAHVERAQLLIESTSRPALQGFLTAWAACLPQLAAEARVRWQLEVDPLEI
>BPP4042 conserved hypothetical protein
MTDTATRLAFARAAQAQRRLHRRPPASPRASPGARDGGSPTQRCGQAYES
AALRWLARQGLRPLARNLRCRAGEIDLAMRDGEVLVLVEVRARAHAGYGG
AAASIGASKQGRLARAAALLLPVLLRRHWPGAPPPVRFDVVAFEAGRPHW
LRGAFWLAEHAPAQGRRGQDAQGWRVR
>BPP0908 transposase for IS1002
MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKWLARFR
SEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSL
ATVARYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVG
HRITGDRAQNRNRGIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQ
ATAYYASLGVRIDRVMTDNGSGYVSRTFRAVCVELGIRHIRTRPYTPKTN
GKAERLVQTCLREWAYARPYTSSAERQAALQPFIDRYNWCRPHSALGHQP
PITRIPDVNNLLRIDT
>BPP1370 conserved hypothetical protein
MAQVAGFAALARADARVLVLGSMPGVASLRAQQYYGHPRNAFWPIAAELF
GLDAAQPYAHRVQALQRAGVALWDVLQACERPGSLDAAIVADSVRPNDFQ
AFFASHPGIACVGLNGAAAATLYRRHVLPRLHGLAHLRYVALPSTSPAHA
AMDFAAKLRAWRAIAPASSDPSACLSP
>BPP3357 bacteriophage-related DNA polymerase
MSAPEAAVPAAPRPNPLQRIWLREIGIEKTWLPAPLASAAGAAAPAAPVA
EAANAAVATAEAVRPAATTPRADGPAASPARAPRPPVAAPQRAEPAAEAD
GQAARAAVAARAAGADLGQLQQLVQDCTACGLCQGRRHAVFGMGAQPARW
MVVGEAPGEQEDRQGLPFVGRSGKLLDAMLQSVGMSRERDVFIANVIKCR
PPGNRNPKPEEIAACSPYLRRQIALLNPERILVLGRFAAQTLLGTEATIG
NLRGRVHSLQTDEGRSIPVVVSYHPAYLLRSPAEKARAWQDLLLAARG
>BPP3286 conserved hypothetical protein
MTRIDFAFGAPDRLRAACRTARKRFQAGQRLVVYCADGGRLAAFDRMLWA
LEDVSFVPHVLANDALAADTPVLLTAGDPAAALALATTGDSRPWLLNLDD
GCPPNFDGYERLLEIVSDDPADRQAARQRWRDYQNAGHALHSHDLSRAGE
A
>BPP2668 Conserved hypothetical protein
MSPAAPAALRYVDDSRPGLARRRLPGGKFAYYDADGRRVRDPATLARIAA
LAIPPAYREVWICARADGHLQATGRDARGRKQYRYHPDWRAWRDAAKYGQ
LREFGRALPRIRRRVARDLSSRGLAPDKVAATVVRLLETTLARVGSRAYA
RENGSFGLTTVTRRHAWLQGSRLRLRFTGKSGVAHDVTVRDRRIARVVKR
CLDLPGQQLFHYLDEDGEPRPVDSELINAYLREAGGGDFTAKHYRTWAAS
ALALSLLLRCPAEGAAARRAAVVEVVKLVAARLANTPAVCRACYIHPGIV
QAYLDGALPAGGAAPAGPRGLAADERRLLAFVAAWPHSENR
>BPP0495 putative integrase
MGARRAHDRRSGLGPRLAGHLDKNGKLRPHGKVFFGEPGRDRIRRPYLFY
EAWTDAKRAAGLEDFRFHDLRHEAVSRFVKARLSDREVSAISSLALTLAA
CGSAKDANKSNFSKTI
>BPP3113 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRHAYGYRDQEYFFLKIRAA
FPGNAR
>BPP0491 phage-related protein
MQVTLLREERMRSFLSQVCDQLNMRWAWEKVKRASVPGDIWIDEADLAHF
EVHLGHELRGLGDDLLSGRFRMSPIRPMVFPKNPDGDGNPRVRQYFHFTV
RDQAWVAVVNVLGRYIDEQMPVWSYGNRLFRSAWIEEDIHGNKIRKIGPY
RHSSGRIYRLFQQSWPLFRRHIALAVSAAAHGYSKVDSLDDDEREELGFQ
RRMHRANQCPFVLADYWTNLPTGPNESDVYWASVDLEKFYPSIPLTACVD
AISQFVPAELRPEVQRLLKTLTQLPLNLDGWTDAELKHIELDESRKTFHK
IPTGLMVSGFLANAALLPVDQEVQKTLPRGRVAHFRYVDDHVILTKTFDD
LITWIDHYKDVIDNLGSGASINPAKTEPKALGELLGTSDTSKRFAGSDLW
NRAQKECRLDPEFPTPLMTKTIALVSAIGKTDFTALEDNELSILPQQL
>BPP1897 transposase for IS1002
MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKWLARFR
SEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSL
ATVARYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVG
HRITGDRAQNRNRGIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQ
ATAYYASLGVRIDRVMTDNGSGYVSRTFRAVCVELGIRHIRTRPYTPKTN
GKAERLVQTCLREWAYARPYTSSAERQAALQPFIDRYNWCRPHSALGHQP
PITRIPDVNNLLRIDS
>BPP1654 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP1903 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP3815 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP1810 conserved hypothetical protein
MSAARMPANAMSADPSDSSHLVETLVSSETLCDGGFLKARRDTVRLPSGR
TATREYIVHPGAVVVVPLLDDGRVLLERQFRYPIGQVMTEFPAGKLDPGE
DPLACARRELLEETGYTAGQWASAGALHLAIAYSTEIIHIFFARQLRAGT
RQLDEDEFLDVHSATVPELLQACREGRVTDAKTLTCVLWLQNVLAGDWPL
DWQPA
>BPP3085 possible exonuclease
MTRFIHTADWQIGRQYGQFDSDDAAVLAEARLEAVARIAAQASELAVDAV
LVAGDVFDTQSVSDRTIRRLFGAMQAYEGPWVLIAGNHDAALADSVWSRA
RRLECIGTNVHVPQGTAAVELPQAGLAVLAAPLTQRHTYDDVTAAFDTMD
SAAGLVRVGLAHGSVADRLPEQADAANPIAPDRAQRARLDYLALGDWHGC
LRIDERTWYAGTPEPDRFRGNTPGYALLVEVASPGAPPQVRQLEVGKYRW
SHWVERLDLASDAEDLGHRLAGLQAGDVLRLELHGALSLARWDALRRDVE
RAAARVRALVADSAGLVLEPDAADLAALSVDGYVGAAAARLQAMQGDGAQ
ASAARVALRLLLQYQRELAEGAS
>BPP1422 putative exodeoxyribonuclease III
MKLATWNVNSLNVRLPQVLDWLAANPVDALCIQELKLTDDKFPLDAFTEA
GYHAAWAGQKTYNGVAIISREPGFALVRNNPRYEDPQQRILAVTLPSPAG
DVRVICAYCPNGQSVDSDKYVYKLAWFDGLRDWLEEEMRTYPRLAILGDY
NVAPADADVHNPEKWEGQVLVSEPERAAFRALLDLGLTDSFRLFEQPEKS
FSWWDYRQFAFRRNAGLRIDHVLLSDALKPHCVACVIDKAPRANEQPSDH
APVIATLAFG
>BPP0826 putative membrane protein
MQMDLSKIQFGVDVATSLAILASAITFLINQRLKTRETKRRQLDESVRAV
TVDEFQSALGNLSTAYVKEIVRHTVPLQASVSRGLERLEKSLELDPKRAN
VLMDAMANTTQAISDYINAICAYNYQIYPLLDSIEGGESQIQEFRRNLQR
LMDSYNNIGRGHESLFKEVRALCDFCAAHPLEQADHEALQRMAMSIVADK
DYRQWVDSFVPSGKEEAYWTCVDKGDFEGEKDLLMRVVSNVIGGFYKAPA
RMQAQVIYLAYSAIIDARQQCKEFLVGMAAINYWLIRKGGGSESLPDVIQ
RYRSQAVFAVDSEIR
>BPP2470 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPISRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYKQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP4252 conserved hypothetical protein
MARLPRLYAPGLPQLVQANFVQPLAPPSQPAPQDILNQLGSWLGESAQRH
RFGVHAWVLANDRILLLATPADEEGLPRLMQTLGRNLAARLRGGRVFAGR
YRSALLEPGAWVLPSQVWLETYPVRSGAATEPDGWPWSSAGSHTGNTGAP
PAQWQSDHADYWACGNTPFDRQANYRRLLHDGLSREQTQRIEQAVSGQWA
LGSPAFIASLAHTASRRVAPGQRGRPRKKPAPAAADTPDTPGTVHTPTTP
NTSN
>BPP1662 conserved hypothetical protein
MFLCSRFMASTEHSFSAGFGSPAAAPAALRGRGAVTNVSHRFQQADRVRV
DDGWANPDYTAGSDAAALPPVADALGQGGRRAIPIAVEGADASPNTCAQA
PAPRTIVQAEEARKMLSRNDSPDIPFDVAANPYRGCEHGCVYCYARPTHA
YLGYSPGLDFETRLVAKANAVAALRAELARPGYRASPINIGSATDAYQPI
ERTWRLTRGMLELLLQTRHPLTVVTKNALVECDLDLLQDLARQKLVTVFV
SITTLDAAMARTLEPRASAPYRRLQTVRTLAQAGVPVGVLVAPVIPFIND
ESLEHVLQEASAAGACYASYTVLRLPWEVKEVFETWLQAHFPDRAQRVLH
RIEDLRNGRRNDTAFGSRMRGTGIWADLLRQRFALATRKLGLNRHRPELD
THRFVPPLESGLPPARGRREARAQPGQLALF
>BPP3626 conserved hypothetical protein
MRRAPRSGKPVLSPYMNRQLLLDVLPAPAPTLNNYIAGPNGQALAAAHAL
TAGRAIYLWGPAGCGRTHLLRGLSARPEAIYIDAARAAQSLRELAEADST
APMPRLVAVDDVHRMDDARQAGLFALYNRWRESAATGRAFALAVSGDRAP
MSLPLREDLRTRLGWDLVFRLDPLSDADKLAALTAQAAERGLQLAPEVIN
WMLTHHERDIRKLAALLDALDRYSLATGRPITTPLLRAMLADPHSQAT
>BPP3777 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP1231 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP3457 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP2284 DNA-3-methyladenine glycosylase
MSSADIVIVKPDYWDDAVAHLMRRDRILKRIIPQHGETWLTSRGSPFVTL
ARAIIGQQISVKAADALWQRFLETVGKRPTPATVLRAGLPALRAAGLSQR
KAEYLVDLATHFGQRLVHPEKWAAMDDEAVIAELVAIRGIGRWTAEMFLI
FNLQRPDVLPLDDLGLLKAISLHYFSGEPVSRFEAREVSLAWQPWRTVAT
WYLWRSLEPAAVQY
>BPP3931 conserved hypothetical protein
MPEETLLAFDFGEKKIGIAIGNTLTRQARPLEIIFSETRAARFGRIGQLL
QEWQPQRAVVGLPLTLDGQEQPASARARRFANQLHGRFGLAVELVDERGS
SMEAQQLLGTHAADDAVAAAVILQRYLDTLPQP
>BPP1844 transposase for IS1002
MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKWLARFR
SEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSL
ATVARYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVG
HRITGDRAQNRNRGIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQ
ATAYYASLGVRIDRVMTDNGSGYVSRTFRAVCVELGIRHIRTRPYTPKTN
GKAERLVQTCLREWAYARPYTSSAERQAALQPFIDRYNWCRPHSALGHQP
PITRIPDVNNLLRIDS
>BPP4247 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLEKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPISRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP3139 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYKQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP0255 transposase for IS1002
MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKWLARFR
SEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSL
ATVARYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVG
HRITGDRAQNRNRGIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLHQ
ATAYYASLGVRIDRVMTDNGSGYVSRTFRAVCVELGIRHIRTRPYTPKTN
GKAERLVQTCLREWAYARPYTSSAERQAALQPFIDRYNWCRPHSALGHQP
PITRIPDVNNLLRIDS
>BPP0396 conserved hypothetical protein
MPRRARIVLQGHPHHVVQRAHRRQQIFTDEADCLPYLNDLQRERRRLQVA
VYAWCLMPNHVHLLLAPLHDCRALSQIMGKLAGGAGRRFNHRHGLSGTLW
ESRYYSSVIGTEEYFRECCRYIELNPVRAGIVDRPEQYPWSSYRARMLGQ
GGVDAPPGYDATSPHGRLDLAAYARFVQEGM
>BPP1696 putative methypurine-DNA glycosylase
MPAPARTARPQPGPALPAAFFNRDAQQLARDLLGKVVRHRVDGLWLSARI
IETEAYYLAEKGSHASLGYTHKRRALFMDGGVVYMYYARGGDSLNFSAAG
PGNAVLIKSGHPWVDEVSGPRALACMQRLNPDAQGQPRPPARLCAGQTLL
CRALGLKVPQWDAKAFDPRRFFVEDVGVRLDRLVRTTRLGIPAGRDEHLP
YRYVDPAYAAFCTRNPLRRGQQAGRDFDWVDPDGALYV
>BPP1610 transposase for IS1002
MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKWLARFR
SEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSL
ATVARYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVG
HRITGDRAQNRNRGIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQ
ATAYYASLGVRIDRVMTDNGSGYVSRTFRAVCVELGIRHIRTRPYTPKTN
GKAERLVQTCLREWAYARPYTSSAERQAALQPFIDRYNWCRPHSALGHQP
PITRIPDVNNLLRIDT
>BPP1666 conserved hypothetical protein
MHGGVTLAAALFLFRCRMSDSAPSRPRRTPVRPLFDPMAQPWETANQGLA
RVDERLLTPPELRSSLRPADHWRLDPLCAAEPRAPGREGSLVAAAVLIPL
VMRADGVRVMLTQRAAHLHDHAGQVSFPGGRIEVSDATPVAAALREAQEE
TGLPVQQVEVLGSMPQYFTATGFAITPVVSLVQPDFELAPDAFEVAEVFE
VPLSFLMDPANHRLYRAALPDGYVRQYYAMPWQRYFIWGATAGMLRNLYQ
TVREALPG
>BPP1561 conserved hypothetical protein
MVRMYVDSHCHLNFPELAQDLPAVLDRMAANQVTHALVVSVNMPDWPGLM
QLVEPHGNLWASVGVHPDYEDTPDPEPAELERLAAHPKVVAIGETGLDYY
RLSEPLDWQRERFRRHIRAARSTGLPLIVHTRASAQDTVRLLREEGADEV
GGVMHCFTESWEIAQQAMALNFHISLSGIVTFKNAQLVHEVAANMPLDRL
LIETDSPYLAPVPYRGKLNDPSKVIHVAEKIAELKGIPVAEVAHASTENF
FKLFNKIKR
>BPP2886 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPISRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP2353 transposase for IS1002
MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKWLARFR
SEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSL
ATVARYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVG
HRITGDRAQNRNRGIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQ
ATAYYASLGVRIDRVMTDNGSGYVSRTFRAVCVELGIRHIRTRPYTPKTN
GKAERLVQTCLREWAYARPYTSSAERQAALQPFIDRYNWCRPHSALGHQP
PITRIPDVNNLLRIDT
>BPP0187 putative integrase/recombinase
MSAAPAASPLPQPMADWLRHLQAHRRYSAHTLDGYTRDLRQLAQLAAAAG
LPLERVANGHIRHFVARLHAQGLGPRSLARALAAWRGFYQWWAPAAGLPG
NPATGVRAPKAPRGLPKALSVEQTQVLLDHAPARLATEPAALRDHAMFEL
LYSSGLRLAELVSLDLRYERTPEYESRSWLNRDDAEVIVVGKGGKRRSVP
VGQSALAALDKWLQARPQLAAAGAGAQDAAALFVGTRGRRIAPRVVQLQL
ARLAQAAGLPAHVHPHVLRHNFASHVLQSAQDLRAVQEMLGHANISTTQV
YTRLDFQHLARAYDQAHPRADRKTSR
>BPP3084 putative GTP-binding protein
MKLRRIALEAFRKFRQPVALEDLDGGLNIIVGPNEAGKSTFVAALRAAFL
ERYATNKPLADLAPWDMPDARPSVTVDFTHDGHAYSLRKQFLHRARCELL
IDGGAQRHEGEEAENLLARLLGYEFAGRGLSRPEHAGVPGLLWIQQGEGQ
TLLAPAGHAGMHVRAALTEVSGELAATDGDRLFERVAAERAALLDARGGR
PKGAYKEAEEAWARAREQCETLAAAKRQVDDDVDRLARLRAEYERAQREQ
PWQAMAERAAQARQRLEGIARERQALEQLQRELAQAGETLALLAEQVGRD
QHDAEALAQLRNDAQAAQQAMEPARAALERVQAGQGELAAQVAHWRERLA
GAQAGAERGDLAEQLARLQADAQRQQQALQQAAELAAAVAGHQAQLAESA
IDADTVARLREQERLLNELRAQQRAMATRLHHRLLPGKQVELDGVALAGD
AQVLITSAARVRIDGVGELEILPGGRDLPALLDELRARGAERDALLGKLG
VPDLAGAEARLAASEQARRDLDMARKALRIHAPDGVPALQAEQAATARRR
DQQQARLQALPPAAAGDMPPLAEIQQALRAAEQAAEHGARATVAARTELD
AQAARAQLLQAQWQARQQDYAGEQRSAQRAQRGLRLVEARALRDSLARRA
KEAGAALAAHQPELVEQDLQRYERSAALEREAQHRRHGELLQLQGRLEQA
GAQGLGEQLLLAEADLQRLARRRAEYMERAEALDLLWRLLDEHRTAATQR
LLEPLARRLQHYLALLFPGAQWRLDETLMPVALRRDGLEDGLEALSFGTR
EQLGVLARLAYADLLAQAGRPALLVLDDALVHADDARRDLIKRALFDAAS
RHQVLLFTCHAEAWRDMGVPLRELPSGG
>BPP3493 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP1641 conserved hypothetical protein
MLERECVGACSPAARLAGIRPGMRRAGALAIAPQAVLLERSPAAEAQARQ
DAALALLQYTPQVALAKDGVLLDVGASLQVFGGPRALHRRIAATLRTLGL
DASLGMAPHAAGAWLLARDPARGAPRRVLRDATLARRLDRLPPALLPQAQ
ARLDWLHDIGCQTLGQLRALPRGGLQRRGGVELLRALDAAYGQAAQAHAW
VQPPASFTRRIELTDYVEHAPALLHVAQRLCEQLGGWLAAHQRAVERIVL
RLDHERGRHACAPTELTLALAQPAWQAHHLLGLLRERLGRLVLPAPAIAV
GLHAPDTVPQPAASTCLFPEPGGTPADHARLLDLLGARLGRERVRRARPA
ADHRPEQANRWQAAHDPPPADPAADQPERLERPFWLLSPALPLSIQQHRP
TYNGQALRLVRGPERIESGWWDAALTVRDYFVAEDAAGARYWLYRERDAR
QARWFLHGLFA
>BPP2796 transposase for IS1002
MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKWLARFR
SEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSL
ATVARYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVG
HRITGDRAQNRNRGIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLHQ
ATAYYASLGVRIDRVMTDNGSGYVSRTFRAVCVELGIRHIRTRPYTPKTN
GKAERLVQTCLREWAYARPYTSSAERQAALQPFIDRYNWCRPHSALGHQP
PITRIPDVNNLLRIDI
>BPP3188 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP1640 putative DNA polymerase III alpha chain
MSAILPGYAELHCQSNFSFLQGASHPEELVTRAGELGYAALALTDECSLA
GVVRAHVEAREQKLPLIIGSSFTLQAGADAPPLDLTLLAQNREGYGNLAE
LITLGRGRAAKGQYLLTPADIEAPAGDNAHLRGMPDCLAILAPPPGLAAE
RLAEQARWLAAQCPGRAWIGLTLLHHCRDDLHRAAVEHAAHASGLPIVAL
GQAQMHRRSRKPLHDTLAAIRTGRSVGQCGYDLAANAERHLRSRLRLASL
YPAQALAQTLAIARRCTFSLDELQYEYPDEIVPAGHTPASYLRQQTYLGA
RQRFPEGMTPAVAAQVEKELALINELRYEAYFLTVYDIVGYARSQGILCQ
GRGSAANSAVCYCLGITAVDPARGNTLFERFISKERNEPPDIDVDFEHQR
REEVIQYIYEKYGRQRAALTAVVISYRPRSVLRDTGRALGVDNGIIDAVA
RAHQWWDGKKEMLRSLAACGLDPASRVARQWAELAETLMGFPRHLSQHPG
GFVISRGKLSRLVPIENAAMPGRSVVQWDKDDLDALRLLKVDVLALGMLS
VLRRALALAGQRRGRPLALHEIPPDDDATYDMICAADTIGVFQIESRAQM
SMLPRLRPRQYYDLVVQVAIVRPGPIQGGMVPPYLRRRQGREDITYPGPA
VRKALARTLGVPIFQEQVMQIAVDAAGFTPGEADALRRSMAAWRRKGGVD
KFRAQLVGGLLARNYTADFAQALFRQIEGFGEYGFPESHAASFALLAYAS
SWLKCHEPEAFLAALLNSQPMGFYAPAQLVQDARRHGVRVLPADVLYSGW
EASLQDAPGAARPAVRLGLNLVKGLREDSARAIEQARVRRPFADTADMAR
RAGLPRQALDALAAADALRTLAGHRRLASWQAAASAQSRDLLREAVIVET
ETPALPAPSEGQTVAADYRSVGLTLGRHPLALLRPQLAARNFQTAAVLNT
YPNRRLARACGIVTVRQRPQTAKGTIFVTLEDETGPINAVVRPELIERQR
RELLDATLLGIYGTWQSVDGVRHLVAQRLVDLSSLLGQLSQDGLAAASRN
FH
>BPP2052 putative deoxyribonuclease
MLIDTHCHLDAAEFDADRMAVARAAREAGVQAIVIPAVERANFATVRQLA
HAVDSGAYALGIHPLYVARARDEDLDSLRRAIESALPDPRFVAIGEIGLD
FFVAEIASGAPRERQERFYAAQLDLAAEYGLPVLLHVRRSQDILLKHLRR
RPGVPGGIAHAFNGSAQQAGAFVEQGFALGLGGAMTYPRALQIRRHAADI
GLDHLVLETDAPDIPPAWLYEPERRNTPGQLPRIAAELAALRGQAVADVA
RATTTTALRVLPRLGALLQDRAATP
>BPP3460 conserved hypothetical protein
MRVGSARVFFLLSMSNDLFASDPAHRPYVPLAERLRPRTLSDVVGQSHLL
GPDKPLRVAFDSGRPHSMIFWGPPGVGKTTLARLMADGFDAQFIAISAVL
GGVKDIRDAVVTAQVAQGQGRRTILFVDEVHRFNKSQQDAFLPYVESGLF
TFIGATTENPSFEVNSALLSRARVYVLQSLSAEELMQLVDRAVAALNEGL
EDGQQIRFEAEAREQLAAWADGDARRLISAVEVVAESAQAAGRDSVDAAW
LETSLSQNLRRFDKGGDAFYDQISALHKSVRGSDPDAALYWLARMLDGGA
DPKYLARRLVRMAIEDIGLADPRATELAVNGADIYERLGSPEGELALAQA
VVYMACAAKSNAVYNAYNAARKFAAEHGSAPVPLHLRNAPTKLMKQLGHG
KAYRYAHDQPHAYAADEQYFPDGLNPTFYRPTDRGLEAKIQQKLAFLDEL
DAQERARKR
>BPP0750 transposase for IS1002
MNNHKHARLTRLGRALLVNRVMQQNWTMRQASQAAGVSLRTGYKWLARFR
SEGLDGLLDRSSRPHRSPKACAPEQVEHFAQQRRQRLPLWRIAREAGRSL
ATVARYMERIGLSRLASLEPPAPVRRYERASPGELLHIDTKRLGRIRGVG
HRITGDRAQNRNRGIGWDAVHLAIDDFSRVSFARILDDEGGDQCAEFLRQ
ATAYYASLGVRIDRVMTDNGSGYVSRTFRAVCVELGIRHIRTRPYTPKTN
GKAERLVQTCLREWAYARPYTSSAERQAALQPFIDRYNWCRPHSALGHQP
PITRIPDVNNLLRIDS
>BPP2163 putative lipoprotein
MREEQVPGGARLIYRDAALKPRQYTAMWLSPVEYYPSPQPSAQVSMETLT
ELQNYLDQSLRRKIGREIRLVNGPGPGVAKARIAITAVGSESEALAAYQY
IPVALAITGARAVLEGGRPQQATIAIESKVTDSQTGQLLWASVRGGTGER
VRAIAQGQASVPAEALKPLIDEWTDNVAREIRNYVRSK
>BPP0808 transposase
MLDRKLLESLGGWQGYGVERVEWPEDPGRTLSIYLKPTAKVMLCEQCGAR
CRQVHETTVRRVRDLPLFEYRVVLHVPRRRLWCEQCGGPRLERLAWLGRY
QRVTDRLAQACSQLLQSSNVQAVARFFELGWHTVKTLDKARLRASVREPD
WSKIEYLAMDEFALHKGHRYATVVVDPIGRQVLWIGPGRSRETARAFFEQ
LPPGAAQRIKAVAIDMTTAYELEIQAHSPQAEIVYDLFHVVAKYGREVID
RVRVDQANQLRQDRPARRIIKSSRWLLLRNRDNLDRQQAVRLDELLQANQ
PLLTVYVLRDELKRLWFYQRPAWARQAWNHWYEQAEQSGIAALNTFAQRL
KGYLHGILARCRHPLNTSIVEGINNTIKVIKRRAYGYRDQEYFFLKIRAA
FPGNAR
>BPP2362 putative nuclease
MLRNKLQPRGGRRGLAGLLSALLLAALAALINWLWPQDHPQAPPARQAPA
ASAGGVPAGSYTLTGPIVNVADGDTVTLRAPGGQRRIRMDSIDAPEEGHG
NEQPGQPFAQASRQHLAGLVAGKTLTAQCYERDQFDRDVCALILPDGRSA
NRAQVEAGYAWAYTARRGDYLRDPAMPGLQRQAREAGRGLWAQSGAIEPW
KWRYDCWRQRRC
>BPP0848 conserved hypothetical protein
MKPSRPGSKPIRIVGGLYRRTLIPVADAPGLRPTPDRVRETLFNWLNHLW
GGEFADKRVLDLFAGSGALGFEAASRGAGQVQMVERDRGAAAALRTLRDK
LQAGAVRIHAGDAMQVIERMDASRFDLVLLDPPFGQGWLERLWPLLPAVL
AEDGLVYVESETAPAPPAGFELLREGKAGAVHYRLFQFAAMRKSMNNPAL
EDGASH
>BPP4244 conserved hypothetical protein
MPDTHYASQQRLTRLYAELGQRAQALPPDQARPLYIAGHCCGWVTHAACD
ALRASGLADLQPDADGLRIGADLAPGPTLDALLAQVAQSLRDARCLRGWR
DELLDVCAGDLRLGAIERAAVRPLGLNTRAVHLNAWTPQGELWIARRAMT
KSTDPGMWDTLVGGLAGSGENLETALVRECGEEAGLDPHQLEQRTPLRTI
LRMHRRLPEGYQVEDLLTSTCVLPADARPANRDGEVMEIATTSVDHAVRR
IEAGEFTLEAALVIVEDIMQRRAEGTT
>BPP0521 putative transposase (partial)
KGIAIRYIQPSKPNQNAFIERFNRTYRTEVLDAHLFANLELVQAITDQCL
VDYNQYPYAQIAGWPPAEAIHASVNPRSGRLSDNVYLTGGGLRQQTLMAH
CLCLDQGPFERPSWSLF
>BPP0205 putative ATP-dependent RNA helicase
MIRSARCSINRCPDRHLFPCSAWRMHMRRYMRQGKAMSFEDLGLAPTILS
ALSEAGFTEPTSVQAAAIPQAMAGADLMVSSQTGSGKTAAFMLPALNRIA
HQPGNKGVGVQVLVLTPTRELALQVADATASYGRNLPGLRTATVVGGMPY
GAQLKALSRRVDVLVATPGRLIDHLKAGRVKLNTVHTLVLDEADRMLDMG
FIEDIETIIERLPKERQTLLFSATLDGSVARLAERMMREPQRIEIAGHRQ
KHANITQSLLYADDAAHKMRLLDHVLRDARLDQAIVFTATKRGADDLADR
LADQGFAAAALHGDMNQRQRTRTLGQLQRGQLRVLVATDVAARGIDVQGI
SHAVNFDLPLQAEDYVHRIGRTGRAGRDGQAFTLATHAERHKVRRIEHYI
GQSINAEVIAGLEPQRTPRPNTGGPRRGGKPMGGKRPGGYGAPREFGDRP
QRPYGDRPQRDFGDRPQRDASDRPQRSFGDRPQRPYGDRPQRDFGDRPQR
PYGDRPQRDFGDRPQRSFGDRPQRDIGDRPQRDFGDRPQRSFGDRPQREG
GWHGAPREGRSFDKRPGGPAKRFAKPAAPRRG
>BPP0304 putative DNA methylase
MPPPSRKPAAPRRVRRPAAAPVPRLAPVAGPGRLIDEGLSFYEASLAGKA
ERYGRGETPHTIHVWWARRPHSAMRALVYAALRAPADKRAAARLSELGAT
PVPQPGLLAEAAAELAGQYGGAPRVLDMFGGGGTIAFEAALLGCDAHSID
VNELAVFLQQANLTYGATLNHGLLKQLAHRHGQAVLQRLARRTETLYPLR
GRLASQAEKPIVYLWTYRHACPQCGYAYTLSRRPWLSKKAGKALAMVATP
GPDGDGVDMVSLPDGEPPPSRWAGRGATACPRCSATATPGIADSADHCVA
VVTSAGVGKQFALRDDALPAAGLLREQEETLLQRTGLALPATTLPAWSGI
VNPALYGMRGHADLFNPRQRLVTLMLLEELLAEHRTLQAAHGADVARFVS
ASLSGLIDQMVDWNCRLSMWIPQNEQVGRAFCGPGVAMLWDYAEVDPVGT
GPGNLHAKLERICAGIDALALLRRPVQVQRASAAALPYPDDSFDAIVTDP
PYYDNIFYSVLADFFYTWKKPLIDAIENRPTTPPHAPTANSGHDELVASR
QRAGGSARAAHDEYCARLGQALREAARVLKPDGLLAFVYSHASVLGWAAL
VTAFRAAPFTINSVQPLSIERKARPRALASEAVNTCTTFVARRAQAPRPV
LARAALQAQFDAILRGGLHRSLLRAGWHEHDAGVALIAQGVALLANCAAV
EDADTAALIVDLAGQVSALLPGFSIKQRASL
>BPP3293 hypothetical protein
MSRRAQRVHDIPGYMLHATAWRETSLIVQAFSREYGCIALVAKGAKRPYS
VLRPVLSAFQPLLLSWSGAGEVKTMTRAEIAGVRPLGGPALMSAWYMNEL
LLRLLPREDAHPVLYDAYDTALTQLSAGSRAAGALRRFEWILLRETGYGL
DEAEPDFNDPAIEPALRRDLRERLEANLAGRPLSTRKVLLELQRL
>BPP1020 ada, O6-methylguanine-DNA methyltransferase
MNLPVRPAPAYATPEARWAAVQARDPAADSHFVYAVRTTGVYGRPSSAAR
LPRRENVEFFDNAEAARAAGYRPSRHNAADRTVTARQHSALVAAACRHIE
QADTPPTLEALAAHVGLSPFHLHRLFKAETGLTPKAYASAQRARRLRAEL
GESASVTAAIYDAGFNSNSRFYEASQQLLGMAPRAYRAGGANARIRFAVA
QCALGAILVAQSQLGICAILLDDDPDYLVRQLQDLFPRATLIGGDAGFER
LVAEVVGFVEAPALGLNLPLDVRGTAFQERVWQALREVPPGATVSYTDIA
ERIGAPKAVRAVAQACAANRIAVAIPCHRVVRRDGDLSGYRWGVDRKREL
LRREAATP
>BPP4192 alkB, alkylated DNA repair protein
MQADLFDAEQTGIRTRLGEQAWVLRGFALPWLDALLPALRAVIAQAPLRH
MATPGGFTMSVALTNCGALGWTTDAHGYRYRPDDPQTGLPWPPMPQAFAQ
LTREAAAQAGFAGFDPDACLVNRYAPGARMSLHQDKNERDFGAPIVSVSL
GLPAMFLFGGARRDERPARIPLLHGDVAVWGGVDRLRYHGVMPLAEGQHP
LLGRQRINFTLRRAGA
>BPP1734 bph2, DNA-binding protein Bph2
MRPIKEALNKSQLIAYLVENTGVEAKSVKAVLAGLESSVLASVDKKGAGE
FTLPGLFKVAVQKVPAKAKRFGKDPFTGEERWFPAKPASVKVKVRPLKKL
KDAAQ
>BPP3894 dbpA, probable ATP-dependent RNA helicase
MTNTSFSSLPLLPALLDNLQGLGFEQMTPIQAQSLPLILEGRDLIAQAKT
GSGKTAAFGLGVLQNLDVNRLAPQALVLCPTRELADQVAQELRRLARLIP
NVKVLTLCGGAAARPQAESLARGTHLVVGTPGRIQDHLARGSLDLSTLNT
LVLDEADRMVDMGFYDDIAAIASHCPARRQTLLFSATYPDNIRKLSARFL
RNPAEIKVEAQHDASRIEQLFFEIDEGQRLDAVAALLAHFRPASTLAFCN
TKIRSHDLVERLRAQGISAEALNGDLEQRERDEILIQFANQSCAVLVATD
VAARGLDIQNLGAVINVDVTKDTEVHVHRIGRSGRGDQKGLALSLCSPEE
MRWANLIEQYQGAPLKWADLGSLRPKSDRPLRAPMITLCIQGGKKDKLRP
GDLLGALTGDGGLAFEQVGKINITEFNAYVALDRQVAKQAFARLSNSNIK
GRRFRMRFLEEF
>BPP1635 dinP, DNA-damage-inducible protein p
MSQLQRKIVHIDMDAFYASVEQRDNPALRGLPVVVAWTGPRSVVCAASYE
ARRYGVHSAMAAARAQRLCPDAVYVPPDFNRYREVSRQVRAIFARHTDLI
EPLSLDEAYLDVTCNKLGLASATEVAQIIRRQIREETGLTASAGVAPNKF
LAKIASDWNKPDGLFVIKPSRVLDFLQPLPVRKVPGVGKVMQARLEQLGI
QTVGDLSRHSVAELEQRFGRYGVRLYELARGIDERAVQADQPAQQVSAET
TFDTDLALEALGEALERLAAKVWEQGAKKGRIGRTTVLKLKTDRFRILTR
SLTLMQPPGSAAELAAIARQLCTRVDLPAHTRYRLVGVGMSNFPDAQAEA
PRQAELFGDAF
>BPP4401 dnaA, chromosomal replication initiator protein
MKEFWQTCVSRLEQELPPQQISAWIRPLVPLAYDEAQAVLRVAAPNRFKL
DWVRKNFSHQIEALAAEWYQRPVQVTFELPGTSSAPRIPMAVPRPVAVSV
PAVVAAVQQASEPAPPAPASADAANIVYERSRLNTDLTFENFVTGKANQL
ARAAALQVAENPGTSYNPLFLYGGVGLGKTHLIHAIGNAMVAAGTGVRVR
YVHADQYVSDVVKAYQRKAFDDFKRYYHSLDLLLIDDIQFFSGKNRTQEE
FFYAFEAMVAQRKQIIITSDTYPKELSGIDSRLISRFDSGLTVAIEPPEL
EMRVAILLRKAESEGVPMPEEVAFFIAKHLRSNVRELEGALRKVLAYARF
HGRDVLTVDVCKEALKDLLSVSNGQITVENIQKTVADFYKIKVADMYSKR
RPANIALPRQVAMYLAKELTQKSLPEIGDLFGGRDHTTVLHAVRKISDAR
AKQAELNHTLHVLEQTLKG
>BPP2472 dnaB, DNA helicase
MNTPADPQLEYLRVPPHSIEAEQSVLGGLLLDNAAWDRIADVLVEEDFYR
HDHRLIWHHIARLIGLARPADVITVNESLASAGKSEEVGGLAYLNALAHN
TPSAANIRRYAEIVRERAMLRKLVSIADEISAAALNPQGKEARQLLDEAE
SKVFKIAQEGERGSAGFQEIQPLLTQVVERIDELYHRESESDVTGVPTGF
ADLDKMTSGLQAGDLVIVAGRPSMGKTSFSMNIGEHVAIEQGLPVAVFSM
EMGAVQLAMRMLGSVGMLDQHRMRTGKLVADDWPRVTHAVQLMQDAQVYI
DETPALSSMEVRARARRLARQCGQLGLIIIDYLQLMSANSAGENRATEIS
EISRSLKGLAKELNCPLIALSQLNRSLEQRPNKRPVMSDLRESGAIEQDA
DVILFIYRDEVYNPDSPDKGSAEIIIGKQRNGPIGTVRLTFQGSSTRFLN
FAPGTQY
>BPP1707 dnaE, DNA polymerase III alpha subunit
MSEAVTNPPPFVHLRVHSEFSVSDGIVRISDLIKRVAKLGQPAVALTDLS
NIFGLIKFYKGARGAGVKPVAGSDVWLTNDDDREKPFRLLLLVRNHQGYL
NLCELLTRSFLENQYKGRAEVRREWLQGQEGLIVLSGARGGDVGQALEAG
NAVTALSLARQWGQLFPGSYYIELQRAGFDGDETYTQAAMRLAAEAGLPV
VATHPVQFLDRDEFQAHEARVCIAEGEILANPRRVRRYTQDQYLLSSEEM
ARRFADVPSALANTVEIARRCNLTLVLGKPRLPNFPTPDGVTLDDYLVQL
SEEGLEKRLQFLFPDEAERNAKRDQYYERLRWECKTIIQMGFPGYFLIVQ
DFINWGKNNGVPVGPGRGSGAGSLVAYALGITDLDPIRYDLLFERFLNPE
RVSMPDFDIDFCQDNRERVIDYVKMKYGREAVSQIATFGTLGAKAVVRDA
GRVLDMPYLFCDALSKLIPFNPADPWTLERTLKDEPAFKDRYEQEEEVRA
LVDLARPLEGLTRSIGMHAGGVLIAPGKLTDFCPLYCQPGQENSAVSQFD
KDDVEAAGLVKFDFLGLRNLTILDWAVRFVRQFNADKRDFDVMALSLDDQ
AAYKVLCDANTTAVFQLESRGMKELLKKLRPSTFEDIIAMLALYRPGPLE
SGMVDDFVNRKHGRAAVDYFHPDLEGTLRSTYGVIVYQEQVMLISQIIGG
YSLGGADLLRRAMGKKKPEEMAKHRELFEQGAREKGHDPDLAVKLFDLME
KFAGYGFNKSHSAAYALIAYQTAWLKAYHPTEFLAATLSSDMDDTDKVQI
FVRDAQDNGVEVLPPDVNASGYRFEPVADKHTEQGKPPRTMRYGLGAVKG
TGQGAVEEILRARQEGGPFANLFDFCRRVSKHAVNRRTIEALIKAGAFDT
IEPNRAAMLASVGTAMEAAEQAARSANQSSLFGDDSGDVVAGELTKVAPW
NLHTTLTEEKTALGYYFSGHLFDAWRDEVRRIVPMQLARLEPQRDLQWMC
GVLAGVRTMMTRRGKMVFAVLDDGTAQIEISVFNELYEKHRGRLREDQLL
VVQGKVSNDEYSGGMRIVAEQLYDLQLAREARAKSLRIRLNGQADAARLR
QLLNPFRAEPENGVPGVPVDVVYRRNNFLCTVRLGEDWRVRMADTLLENL
NDWAKPDGVEVTY
>BPP2841 dnaG, DNA primase
MIPESFIQDLLARVDVVDVVGRYVQLRKGGANLLGLCPFHNEKSPSFTVS
PTKQFYHCFGCGAHGSAITFLMEHTGASFPEAVRTLAAAVGLTVPEENRS
PRQQAESARRKAEVSRHTQVLDAAQAHYLRQLRGSPQAIAYLKQRGLTGE
IAAHFGLGWSGTDRHGLSHVFDNYEDPVLVEAGLVIESEDGRRYDRFRER
VMFPIRNARGSLIGFGGRIIGKGEPKYLNSPETPLFSKGHELYGLWEARL
AIRQEGQVVVVEGYMDVVGLAQQGIANAVATLGTSTTPDHVKKLLRASDK
VIFSFDGDAAGRRAAWRALQACLPVLRDDIAIRFLFLPAEHDPDSYVREL
GAEAFRTRLGEAVALSRFLLDELASRHTMGEAEGRASCLHEAKPLLAAIP
ECALRVQIERELARLVQLTPEEMAQVLAQQPARPLASAAAPAQASAPAAG
REGGPGHADEAPPDWAFEPVHDFEPDAYSVGAVDGEPGMPAAGGWQERKG
RQGGDWKGKKGDWKGKKGDWKGKKGDWKGRRDNDTGGYEGRRTMPSLARR
LLCLLLAHPELVDTMGDQQLEVIDHGPHLGLVRDLILLAQTSGARHVGAL
MEAADPDSDLYVVLKGLRADVLAQEDLPHPQTEWDDALRRMEFDAARAEM
AKLAESGLATDEARRRYLELSSRIMVLKNAGAH
>BPP4400 dnaN, DNA polymerase iii, beta chain
MTMQLVQTTRDALLKPLSTVAGIVERRHTLPILANILMRKEGNKVAFIAT
DLEVQITTHADFGVGPENESTTVAARKLLDILKALPDTGEVKLGLASNKL
SVQSAKSRFALQTLAASEFPTVAQPEQWDVSLSMPQRMLRHLFNMVHFAM
AQQDIRYYLNGMLLVFEPGRVRAVATDGHRLAHCATEADGIAERHEVIVP
RKTVLEMQRLLEDSDEPVALDVAPGQIRFRFGDVELVSKLVEGKFPDFTR
VIPTNYTRQFSVSREALQGSLQRAAILTTDKFKGVRLQLAQHQMKISSSN
AEQEEAQEEIDIDYSFEPLDVGFNVSYLLDVLSNIKAENVQWSVMPDANA
SALITLSDDEQFKYVVMPMRI
>BPP3831 dnaQ, DNA polymerase III, epsilon chain
MRQIIFDTETTGLDPAQGHRIVEIGCVEIVNRMVTGNNLHLYLNPDRDSD
PEALAVHGLTTEFLADKPRFAEVAEQFLAFIADAELIAHNAAFDVKFFNA
ELQRIGRDPLNTHCENIVDSLLHARSLHPGKRNSLDALCDRYGISNAHRT
LHGALLDSQLLAEVWLAMTRGQDALLIDVDDQGANANGALVLGKFDASVL
TVLAASEAELAEHAAYLQALDKAVGGACAWRAIEPLPAESGQPG
>BPP1221 dnaX, DNA polymerase III subunit Tau
MTYLVLARKWRPRSFDTLIGQDHVVRALTHALDTQRLHHAWLFTGTRGVG
KTTLSRILAKSLNCENGITSKPCGQCRACTEIDAGRFVDYLELDAASNRG
VEEMTQLLEQAVYAPGAGRFKVYMIDEVHMLTGHAFNAMLKTLEEPPPHV
KFILATTDPQKIPVTVLSRCLQFNLKQMPPDAIVGHLQAVLGEEQIGFEV
PALRLIGQAAGGSMRDALSLTDQAIAYSAGNLSEEAVRGMLGTIDQRHLV
RLLDALASGDAAGVLAVADELAVRGLSYAGALADLAVLLSRVAIEQRVRG
ALPQDDPLTEDITRLAAALHPDAVQLFYSVAVHSRGELTLSPDEYAGFVM
ACLRMLALNGEAGPATAVQAPRADTTPRAAAPAAAAPAETRPEPTPALAP
QAAAAPRAVARSESKPQPAPEPEPEPEPEPEPEPEPEPEPEPEPASRPAA
TPVAATPPAVAEPEPVAAPTVQARAAEPAPVPPWEDLPEAVAAPAPAQPA
AAPAPVVADDDGPPAWVDEAIPDEAGGGFAPEHSFTADPDDEFETLAPAP
AAMPAPRAPTPRRESGGRGRAARSRLADMSPAGWPELVARLPVTGLAAEL
ARQSEWAGVQGDAVLLRVAVRTLAESESRVRLQTVLCEHFGQGLRLEIEV
GVTGDGTAHAVAQIERAARQQAAEDAVAVDPFVQALVADFGGRVVPGSIR
HVDNPPAA
>BPP3565 fis, DNA-binding protein
MSKKDVLEECVRASLERYFEDLGDSEPHDMWDMVMRCVERPVLEVALERS
GGNQSRASEMLGITRNTLRKKLLAHNIQP
>BPP3134 gyrA, DNA gyrase subunit A
MRRSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMHELNNDWNRAYKKS
ARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSMRYMLVDGQGNFGSIDGDN
AAAMRYTEIRLAKIAHELLADIDQETVDFGPNYDGSEQEPLLLPSRLPNL
LVNGSSGIAVGMATNIPPHNLQEVVDGCLYCLRNPECSIDELIELIPAPD
FPTGGVIYGITGVREGYRTGRGRVIMRAKTHFEDMEKGNRQAIVVDAIPY
QVNKKTLQERIAELVNDKKIEGISDIRDESDKDGMRLVIELKRGEVPEVV
LNNLYKNTQLQDTFGMNLVALVDGQPRLLNLKQLIEYFLQHRREVVTRRT
VFQLRKARERGHVLEGLAVALANIDDFIAIIKAAPTPPVARQELMARSWD
SSLVREMLARVDGDAAGGVAAFRPDDLAPEYGLQGDGNYRLSETQAQEIL
NMRLQRLTGLEQDKIIGEYKDVMATIADLLDILARPERITTIISEELQAI
KAEFSTSAKDTRRAEIEVNATELDTEDLITPMDMVVTLSHGGYIKSQPLS
EYRSQKRGGRGKQATAMKENDWVDQLFIANTHDYLLCFSNRGRVYWLKVW
EVPQGTRNSRGKPIVNMFPLADGEKVTVVLPVKEFSEDHYVFMATSRGTV
KKTPLSDFSNPRKAGIIAVDLDDGDYLIGADLTDGKHDVMLFSDAGKAVR
FDENDVRPMGRNARGVRGMMLEEGQTVIALLVAGDETQSVLTATENGYGK
RTPITEYTRHGRGTKGMIAIQTSSRNGRVVGAVLVMPSDEIMLITTGGVL
VRTRVAEIREMGRATQGVTLISVDDGSSLSGVRRVVESDADADDEDGGED
LGEEGGDQGGDDTGAQGKDSEPTEPTE
>BPP4399 gyrB, DNA gyrase subunit B
MSDQQNTTPENTGYGADSIKMLKGLEAVRKRPGMYIGDTSDGTGLHHMVF
EVVDNAIDEALAGHCDDIVVTIHTDNSISVTDNGRGIPTDIHKDDEFGRS
AAEIVMTELHAGGKFDQNSYKVSGGLHGVGVSCVNALSEWLRLTIRRNGQ
VHQMEFRQGQRVAPLTATGPTDKRGTEVRFLADPAIFTNIEYHYEILSKR
LRELSFLNNGVKVRLVDQRQGKEENFAFSGGVKGFVEYINRSKSVLHPNV
FAVSAESSAGGVLVGVEVAMQWNDSYSESVLCFTNNIPQRDGGTHLTGLR
AAMTRVLNKYIADNELAKKAKVETTGDDMREGLACVLSVKVPEPKFSSQT
KDKLVSSEVRPAVEDAVARTLETWLLEHPNDAKALCGKIVEAARAREAAR
KAREMTRRKSVLEGAGLPGKLADCQEKDPALCELYIVEGDSAGGSAKQGR
DRKFQAILPLRGKVLNVEKARFDRLIASEQIATLITALGTSIGPDFNIDK
LRYHRLIIMTDADVDGAHIRTLLLTLLYRQMPELVARGHVYIAQPPLYKV
KVGRDERYLKDDQEEAQFMLQLALKDAELIPSQGAAPIRGEALNELARQY
VLADAVISRLSRVFDVAALSALAEGVEIDLEDAERTKASAQRLSDALHAA
SPANGVEVVAEYDDVAEKHRLAVRRMHHGNVRVSVLDADFVRDADYAVLA
KSAKTFLGLVGAGAIVARGEGDKRKEQFVSDFREAMQWLRGEAERGLSKQ
RYKGLGEMNPEQLWETTMDPKVRRLLRVQIEDAIAADEVFTTLMGDDVEP
RRAFIETHALSAGNIDA
>BPP1729 holA, putative DNA polymerase III, delta subunit
MAAPLDSDALASHLARAGGRLAPLYTVSGDEPLLVTEAADAIRAAARAAG
YTERTSMVMDARSDWSAVAAATQSVSLFGDRRLLELKIPTGKPGKSGGEM
LARLADQARDQADADTLVVVALPRLDKATRESKWAQALARGGVMADIANV
ERGRLPAWIGMRLGRQNQRADTATLQWMADKVEGNLLAAHQEIQKLGLLY
PEGQLAAEDVERAVLNVARYDVFGLRDAMLAGDTARTVRMLDGLRAEGEA
LPLVLWAVGEEIRLLARVAQARQQGQDAGALMRRLRIFGAHERLALQALG
RVAPGAWPAAVQHAHEVDRLIKGLSVPGRLADPWEEMTRLALRVAAAGAR
P
>BPP1560 holB, DNA polymerase III, delta' subunit
MSLGRFLPWQTEIARSWLSGRDRFAHAWLIHGNGGIGKLDFAAAAAASLL
CESPRQGLACGECAACAWVASGNHPDLRRIRPEAVALEEGADQAEGAEEA
EAGSGGAAAKRAPSKDIRIDQIRALEPWFNTATHRGGWRVALLYPAHALN
VISANALLKVLEEPPAHTVFLLVADAPDRLLPTLVSRCRRLPLPTPSAGQ
ALQWLGEQGVEPAADWLAAAGGAPLAAQRLAARGDAPCPAWLAQLVQPLA
AGKAPDVGTLTENLEKVAAAEWIDALQRLFTDLTLAAHGAASRYYPSLAE
PVRQAAARAQPAQLAETARWLSRQRGLATHPLNAKLFVHAALQRVVLSCQ
>BPP2534 hupB, DNA-binding protein Hu-beta
MNKTELIDHIASKADISKAAAGRSLDALIGAVKTTLKKGGTVTLVGFGTF
AVSARAARTGRNPRTGETIKIKKAKVPKFRPGKALKDAVN
>BPP2600 ihfA, integration host factor alpha-subunit
MGTTMLAEPRTLTKAELAELLFERVGLNKREAKDIVDTFFEEIRDALARG
DSVKLSGFGNFQVRDKPPRPGRNPKTGETIPIAARRVVTFHASQKLKSVV
EQPSSPPDPASAE
>BPP3127 ihfB, integration host factor beta-subunit
MTKSELIAALAARYPQLAARDTDYAVKTMLDAMTQALASGQRIEIRGFGS
FSLSQRSPRIGRNPKSGEQVLVPGKQVPHFKAGKELRERVDLVGNDQGDD
SSNGSSDPLQSVMDMHAMH
>BPP3353 ligA, DNA ligase
MAQAGPTPQQAIARLRAEIEQHNIRYYVHDDPSVPDAEYDALMRDLQALE
AEHPELVTPDSPTQRVGAAPLAEFGSVRHAVPMLSLGNAFDEEDVRAFDK
RVADTLRGAGLLGLDQQVEYFCELKLDGLAISLCYEEGRLAQAATRGDGQ
TGEDVTANIRTIKGVPLRLHGAPRVLEVRGEVLMNRAEFERLNRTQAARG
EKVFVNPRNAAAGSLRQLDPRITAQRPLRFFAYSWGEVHGLPEGMPTRFD
EPAPGVRVASTLPRDTHGGMLDWLAELGLPVNLRHNHRERGADGLLAFYE
RIGKLRADLPYDIDGVVYKVDALPSQRVLGFVARAPRFALAHKFPAEEAV
TQLLGIEVQVGRTGAITPVARLAPVFVGGVTVTNATLHNEDEIRRKDVRI
GDTVIVRRAGDVIPEVVGPVLEKRPADAREFVMLTACPICGSAIERPEGE
AIARCTGGLFCAAQRKQTLLHAAGRKALDIEGLGEKLIDQLVDADRVKSL
ADIYSLTAFELAALERMGKKSAENLVAAIDQARRPALGRLLFALGIRHVG
ETTARDVARHFGSMERIMDASEEALLAVPDVGGVVAGSIRRFFAEPHNRE
IVEQLTQQGVHPQAEAEPEGTSLAGKTFVLTGTMPNWTRDEATRRILAAG
GKVSGSVSKKTAYLVTGEDAGSKLTKAQELGVPVLDEDGLKALLGL
>BPP3367 mfd, transcription-repair coupling factor
MPDLTPPAVPIPATATTLSALKPGARFTQPRPPGSGDGWLLADLARQASK
PLVVLTADPLEAQRLADEIPQFAPELRVRQLPDWETLPYDAFSPHQDLIS
QRLRTLHALMNQGVDILTVPVTTALYRLAPPAFLAAYTFSFKQKDRLDEA
ALRAQLTLANYSHVTQVTAPGEFCLRGGLIDLFPMGSVVPYRLDLFDDEI
ESIRSFDVDTQRSLYPVGEVQLLPGREFPMDEEARNRFRARFREVFEGDP
SRALPYKGIGNGIAFAGIEYYLPLFFEQTATLFDYLSADTITVTVGDIDD
AMQRFAHDTRSRYDFLKVDRERPVLPPDTLFLDHEALFARLKDFPRLALT
AERSHPDFAAAPDVAVARRADDPVARLRALLAQTGDRVLLCADSAGRRET
LAQMLGEHGLAPEAQADSIQAFLDDGARFGLAVAPLSAGFGAPGGALLFL
TENDLYPGHAGATRRGKRTQERTSNVEAMVRDLAELRAGDPVVHAQHGIG
RYHGLVNMDMGEGEMEFLHLEYASGSTLYVPVSQLHVIARYSGADPDAAP
LHQLGSGQWDKARRKAARQVRDTAAELLALYAQRAAREGYAFKLPMSDYE
AFAEGFGFEETPDQAAAIQAVIMDMTSGRPMDRLVCGDVGFGKTEVALRA
AFLAVANGKQVALLCPTTLLAEQHAQTFSDRFADWPVRVVELSRFRSAKE
VAAAVEGINDGRVDIVIGTHKILSKDVRFKRLGLVIIDEEHRFGVRQKET
LKALRAEVDVLTLTATPIPRTLGMSLEGIRDFSVIATAPHKRLAIKTFVR
REDGSTIREALLRELKRGGQVYFLHNEVETIHNRRARLEELVPEARIAVA
HGQMPERELEQVMKGFYQQRHNVLLCTTIIETGIDIPTANTIVIHRADRF
GLAQLHQLRGRVGRSHHQAYAYLLTPGEDAITNNAKKRLEAIQAMEELGS
GFYLAMHDLEIRGTGEILGDSQSGNIQEVGFSMYNEMLNEAVRALKAGEE
PDLDAPFNLACEVNLHAPALLPSDYCPDVHGRLAIYKRLSHADGEDDLIR
IQEELIDRFGKLPEAAQTLLATHRLRLAAQPLGIVKIDASETQALLQFGA
KTTVDPLRIIELVQRQRHIKLSGQDKLRVEIKAPQIAARADAVRAVLRAL
K
>BPP3623 mutL, DNA mismatch repair protein
MSDRRPIATLPDLLISQIAAGEVIERPASVLKEILENAIDAGARAIEVRL
EGGGIRRIAVTDDGSGIPPEELPLALTRHATSKIRSLDELESVASMGFRG
EALASIASVADLTIISRTRGAEHAWQIDGGSLQVSPASGPPGTTIDVRQL
FDRVPARRKFLRSEATEFGHCVDAMERIALAHPEVAFRLFHHDRAQRQWL
PADHGQRIRDVLGAEFVDHVLPVQAAAGAIALMGMVTRPTAARARADRQY
LYVNGRFVRDRTVSHALRSAYADVLHGDRQPAYVLYLDIDPGAVDVNVHP
AKHEVRFRDSGAVHRFVSQVVGQTLAQTGGAEAVPAGVPDGAAPDAAYAG
EPAAAAPGLAEPRAPYPAAYPSPGQSPYQGSPARPHTQVPFRLHGEPAGI
PATDWQSLYRPLPGDAAPAATALRAAPATPLPTADEHPLGQALAQLHGIY
ILAQNSRGLVLVDMHAAHERVVYEQLKRALDDRALPRQDLLVPVVFHAAE
KDVALVEEHETQLNELGFEMRPSGPASIAVRSVPALLARGDIESLARAVL
RDLGAVGVSRLLTEQRNELLSTMACHGSVRANRRLTLEEMNALLRQMEIT
ERADQCNHGRPTWVQWSVNDLDKLFLRGQ
>BPP0813 mutM, formamidopyrimidine-DNA glycosylase
MPELPEVETTRRGIDTVITGRTLRRLVVREARMRWPIPPALPDLLAGRTV
LECGRRGKYLLLRFDHGVQIVHLGMSGSLRRVPEQEAPRKHGHVDWVFDH
AVLRLHDPRRFGAVLWHPDEAGPIAAHPLLARLGIEPFDPRFDGRWLHAY
FRGRRVAIKQALLAGDAVVGVGNIYASESLFRAGIDPRTAAQRVSAARCD
RLAAAIRATLSDALDSGGSTLRDYVGASGEPGAYFAIHAAVYERAGLPCR
VCGAPIRRLVQGQRATYFCPSCQKR
>BPP2265 mutS, mismatch repair protein
MLRNASSRDTMVARRLPHGGQRGRPDTILPMSSTPKQTTGDALAGHTPMM
QQYLRLKAEAGPLLLFYRMGDFYEMFYEDAERAARLLNLTLTKRGNSNGT
PIPMAGIPVHAMEQYLARLVALGESVAICEQIGDPAAAKGPVERRIVRIV
TPGTLTDEALLPAKADRALAAVCVTGKREPRAGLAWLNLASGAFHVTECA
PGQLESELHRIAPAELIQAESAELHMAFEGARTRVPDWHFEADGARAQLL
AHFKTDSLGGFDVEDMPAAVCAAGALLRYAARTQSQALAHVQTIAAERPG
QYVLLDPVTRRNLELTQTLSGEESPTLFSLLDGCRTPMGSRLLRRWLHHP
LRENEPVLARQHAIATMLTVRQEGEQAFAAAGLLETLRDALNAFPDIERI
AARVALRSVRPRELASLRDALVALPALHASLAPLSGSPRARELAAQLAMP
PDIGELLARAVASEPAVAIRDGGVIAAGFDSELDELRALATDGGDFLVQL
EARERERTGIGNLRVEFNRVHGFYIEVSKGQTDKVPEDYRRRQTLKNAER
YITPELKTWEDRVLSAQDRSLAREKWLYEQLLDALAQYVRPLSQCASALA
ELDTLAALAEHARRHDWVAPELIDGAEIDIEAGRHPVVERAIERFTPNGC
RLDQTRRMLLITGPNMGGKSTYMRQVALIALLARTGSFVPATRARVGRLD
RIFTRIGAADDLAGGRSTFMMEMTEAAAILAASTPASLVLMDEIGRGTST
YDGLALAWAIAYRLLTHNRALTLFATHYFELTRLPAEQPTAANVHLAAAE
SAGGIVFLHEVREGPASRSYGIQVAQRAGVPAAVIRQASRELERLEAQGA
PTPQLGLFAAALDADVQSQAMTEQAEDAAALAQLRDQLAAIDPDSLTPRE
ALDALYRLKQHLT
>BPP3980 mutY, putative A/G-specific adenine glycosylase
MAPMDFASRITAWQARHGRHDLPWQNTRDPYRIWLSEIMLQQTQVATVIP
YYQRFLERFPDVAALAAARQEDVMPYWAGLGYYARARNLHRCAQEIMQRC
GGRLPPRAEEIATLPGIGRSTAAAIAAFAYGERSPIMDGNVKRVFTRHFG
IEGDPARRAVEQQLWALAAAQVQAAPDLDMPGYTQGLMDLGATLCTRGKP
ACERCPVAQSCIARRDGRQAELPTPKARKAIPERSTAMLVLHGPDGILLH
LRPAPGIWGGLWSLPECDPAHDPGAAARELGLQAEAPVELAAFAHTFTHY
RLHVRPWYLAVRGAALRQAATPERWVSPAELPATALPAPVRKLLDGLLAA
LPAPPRQA
>BPP3334 nth, endonuclease III
MNAVKRREIFARLQAANPKPTTELEYETPFQLLIAVLLSAQATDKSVNLA
TRKFFPRHGTPQAMLELGEEGLAEYIKTIGLYRTKAKNAIATCRLLLERH
GGEVPQSREALEALPGVGRKTANVVLNTAFGEATIAVDTHIFRVSNRTGI
APGKNVLEVERKLEKVVPREYLLDAHHWLILHGRYVCVARKPKCPQCGIS
DLCEYKLKTKA
>BPP3786 nudH, putative Nudix hydrolase
MLDREGYRPNVGIILVNGKNEVFWGKRIREHAWQFPQGGIKYGESPVQAM
YRELHEEVGLKPEHVRILGRTRDWLRYNVPDHFVRREWRGHYKGQKQIWF
LLRLVGRDSDVCLRATQHPEFDAWRWSQYWVPLDAVIEFKRDVYTQALNE
LAVILFRRHHETRYLRQRVHGPRSTDNPSSETDGHAHIAG
>BPP4193 ogt, methylated-DNA--protein-cysteinemethyltransferase
MRGTRAPHTVKAPSNQERIMHFFQAQLESPLGALSLVTDDRQQVRALEFA
DSPQRLRRLLHLHYGTCTLREAPAPAAIAAALAHYFSGQCDALDGIATAT
GGSALQQRVWQALRRIPVGEVTSYGALARQLGHDDRQAARAIGGANAANP
IALIVPCHRVIGKDGALKGYAWGLERKRWLLAHENAAAGLLREAG
>BPP4040 ogt, methylated-DNA--protein-cysteinemethyltransferase
MNPPSAQATDILYCDTDTPLGPMRLAARGQALCGAWFVDQRDCPAAAGWT
PDAAHPALRQAAAELEQWFAGRRRAFEVDMQPEGTPFQRQVWQALLELPF
GATISYGELARRVGRPKAARAVAGAVGRNPISILIPCHRIIGHDTSLTGF
GGGLPRKQALLAHEGHRYLSRAARARRVSTTQMELPFGAA
>BPP1881 parC, topoisomerase IV subunit A
MSDSNQPGLFDGGATDPHEAITLGRYAEQAYLDYAVSVVRGRALPDVGDG
QKPVQRRILYAMQAMGLAAGAKPVKSARVVGDVLGKYHPHGDQAAYDAMV
RMAQDFSLRYPLIDGHGNFGSRDGDNAAAMRYTEARLTPFSKLLLDELEE
GTVDFVPNYDGSQQEPAMLPARLPVMLLNGASGIAVGMATEIPSHNLREV
AQACVALIRNPKLPQEELLALVPGPDFAGGGQIITPAADIAQIYATGRGS
LKARARWQFEEMARGQWQLVVTELPPGTSGQKVLEEIEEITNPKVRAGKK
SLSAEQQQAKAVMLSLLDAVRDESGKDAAVRLVFEPKTSRVDRDEFVNTL
LAQTSMESNVPVNVVCIGTDGRPRQKSLRDVLEEWVAFRTDTVVRRTRHR
LDKVLDRIHVLEGRMVVYLNVDEVIQTIREAEEPRAALMARFGLTERQAE
DILEMRLRQLARLEGIKIEQELAGKREEQLRLQDLLDNPGSLKRLLIKEI
EGDAKQYGDDRRTLIETAERAVLETKVVDEPVTVIVSQKGWLRARQGHGH
DAGQFSFKQGDDLYGAFECRTTDTLIAVGDNGRVYSVAVSGLPSARGDGQ
PVTTMIDLEAGTRIVHTIAAASDSRWLLATRRGFGFAARLSDMSSRQRAG
KQFITLEKGDELLRPVPLFEGATQLALLSAKGKFLVFGLDEVKSLSGGGR
GTILMGLDTADKLDQTVPIGAAGLRAAGIYRNKQTEDILAGAALAPYVGK
RARKGRQLDVRPRQPVLSPVF
>BPP1879 parE, topoisomerase IV subunit B
MDLSVKCRFFSTDVGDNLATPRYTEASIRVLKGLEPVRQRPGMYTRTENP
LHIVQEVIDNAADEALAGYGKQIQVTLHGDGSISVEDDGRGIPVGLHPEE
NAPVVELVFTRLHAGGKFDKQGGGAYAFSGGLHGVGVSVTNALATRLEVV
VWRDGAVHRLVFAGGDVIEALAPYPEGGRKKSGTRVRVWPDAKYFDSPAI
PMAELTHLLRSKAVLLPGVKVSLVNEKTGDTRTWQYQEGLRGYLAEALAG
AELMIPFFEGQQYAGADHDSFAEGEGAQWVVAWAEDGNVVRESYVNLIPT
PAGGTHESGLREGLFGAVKGFAELHSLLPKGVKLLPEDVFARASFVLSAK
VLDPQFQGQIKERLNSRDAVRLVGGFAKSALDLWLHSNVEYGKKLAELAI
RQAQARQRSAQKVEKRKSSGVAVLPGKLTDCESSDASRTEVFLVEGDSAG
GSAKMGRDKEFQAILPLRGKVLNSWEVDRDRLFANNEIHDISVAIGVDPH
GPGDEPDLSGLRYGRICILSDADVDGSHIQVLLLTLFYRHFPKLIEAGNV
FVARPPLFRVDVPAQGKRPARKIYCLDAGELEAAQDKLRKEGVRESAWSV
SRFKGLGEMNPEQLWETTMNPDTRRLLPVGYGDLTPGDTTRMFDMLMGKG
ESSQRRAWIEEKGNLAELDI
>BPP1869 polA, DNA polymerase I
MKKTLLLVDGSSYLYRAFHAMPDLRNAQGEPTGALYGVVNMLRKLVQDHK
AEYAVCVFDARGKTFRDDLFPDYKSHRPPMPEDLAAQIEPIHEAVRALGW
PLLAIEGVEADDIIGTLARQASAQGIDTIVSTGDKDLAQLVDPHVTLVNT
MSGEVLDVAGVNSKFGVPPERIVDYLMLVGDTVDNVPGVNKVGPKTAVKW
LAEHGSIDALVAAADSVKGVAGNNLREAIPNFPLTRTLLTVKCDCDLTGH
VSDWEDLAWRERDAATLTALFDRYGFRTWLRELTGDQERLPTGDARAVPQ
AVAPAELDYRIITDWAAFDAWMALVEDAPLVALDTETTSLDEMQARLVGL
SMAVKPGVACYIPVAHRGPEAGDQLPRDEVIARLRGWLEDAGRAKLLHHA
KYDTHVFANEGVSLAGVAEDTMLQAYVLESHRGVGLNDLAQRFLGRSGVN
YEDLCGKGAKQIGFDEVAVPLAGHYSCEDSDFTLQLHEVLRPRVAEDEGL
ERTYLLELQVSRVLTVVERNGVKVDAQELGRQSHKLGQEMLALEQRAYEL
AGQPFNLNSPKQLGEILFGRMGLPVVRKTAGGAPSTDEEVLSKLAQDYPL
PQVLLEYRGLSKLKSTYTDKLPRMINPATGRVHTHYSQAAVITGRLASSD
PNLQNIPVRTEAGRRVREAFIAEQGKLLSADYSQIELRIMAHVSDDANLQ
RAFAAGEDIHRATASEVFGVPLAEVGAEQRRAAKAINFGLIYGMGVFGLA
SNLGITRDAAQAYIDRYFTRYPGVARYMDDTRRLARDQGYVETVFGRRLQ
LPDIRAASGPRRQGAERAAINAPMQGTAADLIKMAMVAVQDWLDAERLRT
RMIMQVHDELVLEVPDEELAAVAEALPRLMCDVATLRVPLVAEVGMGTNW
EQAH
>BPP2467 priB, primosomal replication protein n
MNTLELSARVLECGAMRHTPAGLPALELLLVHESEVVEAGHPRRVELTIS
AVALGDLALLLADTPLGTEMQVQGFLAPARKDSVKVKLHLQQARRIAGSM
GRDPLVG
>BPP1850 radC, DNA repair protein
MSLPEPLLRAGWPRERLLRHGAATLSDPELLALALRTGVAGCNAVQLGHD
LLRRFGGLRGLLGTSPAELQVVPGLGTAKACVLAAVLELARRTLEEDLVR
QDALANPDLVRRYCQAALGHRKVEHCIALYLDARLKLIICAEVARGTLTQ
AQIYPREIVREALRHHAAALILAHNHPGGTAAASAADIAMTRQIRQALAL
VDVRLIDHVIVAGAATVSMAAQGHL
>BPP2633 recA, RecA protein
MDDKTSKAAAAEKAKALAAALSQIEKQFGKGSIMRYGDNEVEHDIQVVST
GSLGLDIALGVGGLPRGRVIEVYGPESSGKTTLTLQVIAEMQKLGGTCAF
VDAEHALDVQYASKLGVNLTDLLISQPDTGEQALEITDALVRSGSVDLIV
IDSVAALVPKAEIEGEMGDSLPGLQARLMSQALRKLTATIKRTNCMVIFI
NQIRMKIGVMFGNPETTTGGNALKFYSSVRLDIRRIGAIKKGDEVVGNET
RVKVVKNKVAPPFKQAEFDIMYGSGISREGEIIDLGVQANVVDKSGAWYS
YSGNRIGQGKDNVREYLKEHKEMAIEIENKVRENQGIVSRAATFPASEAE
DGE
>BPP2973 recG, ATP-dependent DNA helicase
MVVPEDFVLHLPLRYEDETRVTPVSSLRPGFAAQVEGEILRSEVLYRPRR
QLTAVLADDSGELQLRWLNFYPSQQKQLTVGRRLRARGEVRGGLFGREMV
HPRMSSADQPLPASLTPVYPSTDGLPQPTLRKAIGQALARADLSDTLPEE
ARRRYGLAEFAPAVRLLHAPPPDAAEHELMERIHPAWRRIKFDELLAQQL
SLAAARAARRVKRAEPLPASQDEDGLVARLYEALPFALTGAQQRVVAEIA
ADLAQPYPMHRLLQGDVGSGKTVVAAIAAAQAIACEAQVALMAPTEILAE
QHFRKLVGWLEPLGVAVAWLSGSLSAKARREAAAAVADGSVQLVVGTQAL
IQDHVMFQRLGLSIVDEQHRFGVGQRLALSRKGETGRGVIVPHQLNMSAT
PIPRTLAMTFFADLDVSVIDELPPGRTPVVTKLVADARREEVIGHIAHAA
RQGRQAYWVCPLVEESEALELQTAVDTHEAMRAALPDLRIGLVHGRLPQA
EKAEVMRAFREGEIDLLVATTVIEVGVDVPNASLMVIEHAERFGLAQLHQ
LRGRVGRGTAESICVLLYQAPLSQVARQRLRAMFETSDGFEIARRDLEQR
GPGEFLGTRQSGLALLRFADLEADVAIAEQAREAAVWLRAKHPEAVAAHL
ARWMRGREDFLRT
>BPP2048 recJ, single-stranded-DNA-specific exonuclease
MAARAQAQLERLVVSPRLIIRTADLQACQHLEAAGIHPLLSRLWAARGVI
HPEQTRMAWPALLPPDRLTHSAHAAAVLADAIEQGKRLLIVADYDCDGAT
ACAVGLRALSAMGADVDFLVPNRFETGYGLSPAVVELACRHRRGKPDIII
TVDNGIASVDGVAAANAAGIGVVITDHHLPGDTLPEALAIVNPNQPGCGF
GSKHLAGVGVIFYMMLALRAELRRRGVYAPDGGPRLDALSDLVALGTVAD
VVKLDANNRLLVTQGLQRMRAGRMQPGVRALFAVAGREPRTASGFDLGFA
LGPRINAAGRLADMSLGIACLTTDDEAQALEMARELDNINRERRTIEAEM
RDQALAAMEAPDAAAGATVCVFDPGWHQGVVGLVASRLKEKFWRPTLAFA
PAGEDELRGSGRSIPDVHLRDALDLVSKRHPGLIRKFGGHAMAAGLTLGS
GDFAAFAPAFDAAVRELTGRDRFEPLLETDGSLESGYANAEVAGLLQQQV
WGAGFAAPLFLDEFTVRSQRLVGGKHLKLALERGHQRFDAIWFGHDQSLP
ERIQAAYRLEQNIWNGMVSVQLVIEHAA
>BPP1223 recR, recombination protein RecR
MAARRAAGRAAVCAMDPQLPEPEPLIALIEALRRLPGVGVRSARRMAYHL
LQHDLQGADMLGRALSGAVQHLRHCARCNSFTEDEVCATCANPKRDPGLL
CIVETPADQNMIESSHGYRGLYYVLMGRIAPLEGVGPRELDFQRVIERAC
DGVVQEVILATNFTAEGETTAHFLGDALSERGLKVTRLARGVPAGSELEY
VDAGTIAWALMERRST
>BPP4130 rep, ATP-dependent DNA helicase
MLAGAGSGKTRVITQKMAYLLRECGYMGRNIVALTFTNKAAREMAERVKT
LVDPKLAKGLTISTFHALGVRLLREEAAHAGLKPQFSILDADDAMSIIQE
LLATTDRGRLREVQSIISLWKNALLTPDQAAAAAITPTEVEAVTVYRGYA
ATLAAYQAVDFDDLIRIPAELLERNEEVRTRWQNRVRYLLVDEYQDTNVC
QYRLVQLLTGVRAMFTAVGDDDQAIYAWRGATIENLAKLTTDYPNLKLIK
LEQNYRSVQRILAAANNVIERNPKLFEKKLWSDLGHGEPIIVSPMNGDEH
EAESIAMKVSAARFERQAQWKDFAILYRSNHQSRVLEQALRNLKIPYTIS
GGQSFFDKAEVRDILAYLRLVANDEDDPAFIRAATTPKRGIGQGTLQTLG
QYAAQRQCSLLAAVDEAGPESLLAPRQLEPLRTFAEFVRRIQWRAGRGVE
GQPARAPEPAGQILDDLLSAIQYERYLYDMLEERPAQTRWQNVLELTGWL
KRKAEEDGMTLFDLVQHVALVTMLERGEEEEPDAVKLSTLHASKGLEYPH
VYLAGVEEGLLPHLGKDDEDSGDPARAAETLATRIQEERRLMYVGITRAQ
RSLNLSWCKKRRRAREDVVREPSRFIEEMGLGDAKVQEDEATRAMSPKER
LGMLKALLKKD
>BPP4328 rhlE, putative ATP-dependent RNA helicase
MRAIADTGYTAPTPIQAQAIPLVLQGGDLLAAAQTGTGKTAGFTLPILHR
LMQTKPAARKPGRPRCLILTPTRELTAQVAESVQTYGKYASLSSMVMFGG
VNINPQISALKKPLDILVATPGRLLDHAGQKTVDLSGVEILVLDEADRML
DMGFIRDIRKVLALLPKQRQNLLFSATFSDEIRSLARGVLNDPGEVSVTP
RNTATELVTQTVHLVEQHHKRDLVSHLIRESGWHQVLVFTRTKHGANRLA
EKLVKDGLSAAAIHGNKSQSARTRALSGFKDGSVAVLVATDIAARGLDID
QLPQVVNFELPNVPEDYVHRIGRTGRAGATGAAVSLVDDSEIKLLKAIER
LIKKPIERRAVDGWTPPAGGPTAEDRADREREMRDDDRGRGRRGDRGGDR
GQRAGGDNRAPQARDGQRRATGAHPQGSAPRNAAGPRADAKRNDAGRPQG
RAPGETGAARAPAPARDRPVGNGTRGVLLGK
>BPP3834 rnhA, ribonuclease HI
MQNLEGSGDGQQVEMWTDGACKGNPGPGGWGVLMRAGQHEKTMHGGERQT
TNNRMELMAVIEGLRALKRPCRVTIHTDSQYVMKGMTEWLANWKRRGWRT
ADKKPVKNVELWQALDEQVGRHQVQWRWVRGHAGDPGNERADALANQGVE
AARGR
>BPP1541 rnhB, ribonuclease HII
MEQPDLFGTLAPLPAIIAGVDEAGRGPLAGAVYAAAVILDPDRPVDGLAD
SKVLKAEQREALAVQIRAQALAWFVASASVQEIDSLNILRATMLAMQRAV
AGLAMAPELAMVDGNQAPKLRCAVQTVIKGDALVPAISAASILAKTARDA
DLLRLHALYPQYGFDQHKGYGTPQHLSLLREHGPCPEHRRSFAPIKAYGA
P
>BPP3568 ruvA, holliday junction DNA helicase
MIGRITGTLIEKSPPVVCVDVNGVGYEIDVPMSTLYALPETGARVTLFTH
LVVREDAQLLYGFGSSAERSTFRELIKVTGIGARTALAVLSGLSVAELSQ
AITLQETGRLTRVPGIGKKTAERLLLEMRGKLGADIGATPHAAGGHQSDI
LNALLALGYSDKESQAALKKLPEGVDVSEGIRLALKALVR
>BPP3571 ruvB, holliday junction DNA helicase
MAIQSDSLSSLPDSPRIVAPQPVSPNEESIERALRPKALEEYVGQQRARE
QLEIFIAAARKRGEALDHVLLFGPPGLGKTTLAHIIAHEMGVQLRQTSGP
VLERPGDLAALLTNLERNDVLFIDEIHRLSPVVEEILYPALEDFQIDILI
GEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRDRFGIVSRLEFYNTDEL
ARIVTRSASLLNADITADGAHEVARRSRGTPRIANRLLRRVRDYAQVKAH
GVIDQDAAGRALAMLDVDPQGLDVMDRKLLEAIVHKFDGGPVGVDSLAAA
IGEERDTIEDVIEPYLIQHGYLQRTPRGRTATLTTWRHLGLNPPAAASGG
TGELFSK
>BPP3567 ruvC, crossover junction endodeoxyribonuclease
MRVLGIDPGLRRTGFGVIDAEGMRLRYVASGTIVVPPALSLPERLKVILD
NLREVARETRPDVAALEIVFLNTNPASTLLLGQARGAALCALADSALDVH
EYTALQIKKAVVGTGRAAKEQVQMMVQRLLSLDGTPAPDSADALACAICH
AHVGPLHDRLDRLGTAAQLGSRPRLRNGRLVG
>BPP0240 smf, conserved hypothetical protein
MPLTHTRAELSAWLRLSQEPGVGPAAAYALLAALGMPEQIYAQGSATLAR
HVPQDVARQLRAPLSDEAAALIEQTLQWAEQPGHHILTLADPAYPQQLLT
IADPPILLYVNGDPACLRRPAMAVVGARNATPGGQDNARAFARHLAGQGW
CIVSGLALGIDAAAHEGALLAGAQGAGTVAVMGTGIDRIYPAAHRDLAHR
IVQHGALVSELPLGTGAQRHHFPRRNRLVAGLARGVLVVEAARQSGSLIT
ARLAGENGREVFAIPGSIHSPLSRGCHALIRQGAKLVETAQDIADELGGA
GPAASARTAPPDRPAPPHPLLDALGFDPLHLDALQARTGMDAASLNAQLL
ELELDGRVARVEGGRFQRLR
>BPP0077 ssb, single-strand binding protein
MASVNKVILVGNLGRDPEVRYSPDGAAICNVSIATTSQWKDKASGERREE
TEWHRVVMYNRLAEIAGEYLKKGRSVYIEGRLKTRKWQDKDTGADRYSTE
IVADQMQMLGGRDSGGGYGGGYDDAPRQQRAPAQRPAAAPQRPAPQAAPA
ANLADMDDDIPF
>BPP4374 topB, DNA topoisomerase iii
MNKTLIIAEKPSVALDISRALGGFAREGDYFESDRYVLASSIGHLLSLVA
PNDPVKGKWSFTHLPVIPPAFELGPTDKKSAERLKLLVRLAKRKDVDAII
NACDAGREGELIFRYIVQFAGVKKPIQRLWLQSMTQQAIRDAFANLRDDE
QLKPLEAAARSRAEADWLVGINGTRAMTAFNSKDGGFFKTPVGRVQTPTL
AIVNERENRIRSFVSRDYWEVHATFVAAAGLYEGRWIDPAFKKDERDPEK
RESRLWSLAAAQSVVAACRAQSGSVTEESKPSTQMSPALYDLTSLQREAN
GRFGFSAKTTLALAQTLYERHKALTYPRTDSRYLPEDYINTVRQTMQVLA
QGDSNAVGALSRHADTVLAQNWVKPNRRIFDNKKVSDHFAIIPTLQVPRD
LSEAEGKLYDLVLKRFLAVFFPAAEYRVTTRLTEVQGHRFKTEGKVLVTP
GWLAVYGKEAQGEDANLVPVADGETVRAEDVEAVGLATKPPARYNEATLL
SAMEGAGKLVDDEELREAMSERGLGTPATRAAIIEGLLNEAYLRRDGRDL
VPTAKARQLMTLLSGLDVSELTSPELTGEWEHKLKQIEQGALDRAAFMRE
IAQMTQVIVKRAKEYERDTVPGDYATLQTPCPKCGGVVKENYRRFACTQC
DFSIGKHPGGRTFELPEVEELLAKREIGPLQGFISKMGRPFAAILRISGE
YKLEFDFGQNDEEDNEAVDFSGHTSVGACPKCSARVFEHGMSYVCEKSVG
PQKSCDFRSGKVILQQEISREQMEKLLTAGRTDLLDGFVSSRTNRKFKAF
LVRQPDGKVGFEFEPRGDKPGRPGAAAKKAAGKTATKTAAKAPAKTAAKK
AVKKAAPKKAATKTAARKTAKKSAA
>BPP0206 ung, uracil-DNA glycosylase
MPNDNRLAPAALAAQAAALPAAWRHVLEQPAVARAFASVLGHVEQRLAEG
AVVYPATPFRALDQLAPADVRVVILGQDPYHGPGQAQGLAFSVPDDCKCP
PSLRNIFNEIAVDYPRPTRHDLSAWTRQGVLLLNTSLTVEDGQPGSHAKR
GWETVTDALIAEVARDPSPKVFLLWGAHAQAKQALVPADAGHLVLAANHP
SPLSARRPPVPFVGCGHFRQTNAWLQQRGQKPVDWSGEQNNASRQGEFAL
>BPP0075 uvrA, excinuclease ABC subunit A
MDAIRIRGARTHNLKNVSLDLPRHQLVVVTGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLQLMDKPDVDLIEGLSPAISIEQKSAGHNPRSTVGT
ITEIHDYLRLLYARVGTPYCPDHGLPLQAQSVGQMVDAVLAWPAEARLAV
LAPIARARKGSFEDELASLQAQGFVRLRVDGQLQEIEQLPALKKTEKHDL
DVVIDRLRIRPESQQRLAESFETALQLAEGRAIALDMDSGREQVFSSRYA
CPICSHSLAELEPRLFSFNNPMGACPGCDGIGQVGFFDPKRVVAFPELSL
AAGAIRGWDRRNSFTHSLLTSLATHYEFDIDTPFEELPAEVREKVLHGSG
EEEIAFFYVNEKGRSTVKRHPFEGVIPNLERRWRETDSATVREELGKYRN
IKTCPDCGGSRLRPEARNVLIGSEPREGERHGQAIFEVESMPLSVCLDWF
RQLQLTGAKQEIAQRIVREIEARLSFLNNVGLNYLSLDRSADTISGGEAQ
RIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLIGTLQHLRDLGNSVIV
VEHDEDMIRCADWVVDMGPGAGEHGGQVVAQGTPEAVQTDQQSLTGQYLS
GARAIEIPARRPVADDQPWLHLSGATGNNLKSVDLRIPAARLVCVTGVSG
SGKSTLVNDTLAVALARQLNHAQGEPAPYAGLAGLEHFDKTISVDQSPIG
RTPRSNPATYTGLFTPIRELFAGVPEARARGYDPGRFSFNVKGGRCEACQ
GDGVVKVEMHFLPDMYVPCDVCHGKRYNRETLEIRYRGRNISEVLDLTVE
QALEYFESVPAIARKLHTLIDVGLSYIRLGQSATTLSGGEAQRVKLSLEL
SRRSTGRTLYILDEPTTGLHFHDIELLLKVLNQLVDSGNTVLIIEHNLDV
IKTADWLVDMGPEGGDGGGRVVAQGTPEQVAASPDSHTGHYLGRVLRNGK
RR
>BPP3597 uvrA2, putative excinuclease ABC subunit
MSSQIRIVGARQNNLKNLDLTIATGELVVVTGVSGSGKSSLAFDTLYAEG
QRRYVETFSPYARQFLDRMDKPQVDRIEGILPAIAIDQTNPVRSSRSTVG
TMTELNDHLKLLFARGARLYCRGCGKQVRRDTPESVFHSLAGRAAALGDP
RLVVTFPIAVPANFTEDEVRGFLDQQGYTRVHAEEAASAAAPAPKARRGK
SAKGAKDGAAPVARRILHVVQDRFRFAAAERERVMEALDTALRMGAGHLA
VYAMGEEGGADQAVWKYSDRLHCADCDIEYTDPLPSSLSFNSPLGACEAC
RGFGRVIGIDIGLVIPDENKTLLEGAIKPWQTPSFKECQDDMVKYAPRAG
IPLSVPWKSMTPEQRGWVLHGDPDWKGGNQAWKTQWYGVHKFFAWLESKA
YKMHVRVLLSKYRSYTPCPTCHGARLKPDALLWRLGSRAEADTVLPPGEG
RYQRFMPAGTSWSRPQLEALDGLSVHDVMQLPIERVRRFFDGLRFEGVLD
AAADLLMTEVRARLKFLCDVGLGYLTLDRQSRTLSGGEVQRINLTTALGT
SLVNTLFVLDEPSIGLHPRDMHRVVEVMHRLRDAGNTLVVVEHDPQVMVA
ADRIIDIGPGPGERGGRIVFDGSPAQLRAANTLTGDYLGGRQRVEAPRPM
PVANNTPRLILEGATAHNLNNVSIELPLGRLVCVTGVSGSGKSTLVQDVL
YPALLKQKGKPSEAPGAFDRLLGAEQIADVVMVDQTPIGKTARSNPASYV
GAFDAIRKLYAQAALSKERGYTAGTFSFNSGDGRCPTCGGTGFEHVEMQF
LSDVYLRCPDCDGKRFRPEVLEVRVEHLGKSASIDQVLEMTVSEALEFFK
GLRDVQTGLAPLADVGLEYVRLGQPVPTLSGGEAQRLKLAGHLAEAARSG
ISTAKVAKKGSLFLFDEPTTGLHFDDVARLMRAFRKLLAAGHTLLVIEHN
LDVIRAADWLIDLGPEGGDAGGEVVGVGTPQDLMANDRSHTGLALRDYEG
SILPVAPVSALAEPAAAYGEEAGTPLQSLMRRRRQAAQSIEIRNAREHNL
KNVNVEIPRDKFTVITGVSGSGKSTLAFDILFNEGQRRYLESLNAYARAI
VQPAGKPDVDAIFGIPPTVAIEQRTSRGGRKSTVATMTEIHHFLRLLYVK
LGTQYCPDCKVAVEPQNADQIVARLLREHKGQHIGVLAPLVTARKGYYTD
LAKWAGSKGHTHLRVDGAFIPVSPWPRLDRYKEHTIELPVADVVVDPGNE
AALRDAVRQALEHGQGVLSVVYPLDRLRAGLDGDLQQQHFSVKRACPSCG
VSFPEPDPRLFSYNSKHGWCGGCFGTGLQLQGFDAEQTGEETAWNAWYEG
EARTCTVCHGQRLNRVALAVRWRDRSIAELAALPVSDAHTFFTGLVTRGR
EGEIARDILAEIRGRLNFMQEVGLSYLALDRAAPTLSGGEAQRIRLAAQL
GSNLQGVCYVLDEPTIGLHPRDNRILLDALARLEGNGNTLVVVEHDDDTI
RRASHIIDIGPGAGIRGGRVVAQGSVQDLIDAPESVTGRYLAKPLAHPLN
GRRAVTADTPMIRVHGARLHNLRSVDASIPIGRLSVVTGVSGSGKSTLAR
EVLLDNLVQAVSQGKAPGWSGCERITGWEVIDRVLEVDQTPIGKTPRSCP
ATYVGFWDDVRKQFADTREARMRGWTAARFSFNTGDGRCPICEGQGMRTI
EMSFLPDVKVPCDACNGARFSSDTLSVQMRGKNAGELLAMEVDDAIGYFA
AHPKIHRPLQLMQDVGLGYLTLGQPSPTLSGGEAQRIKLVTELSKARLTE
GVITTGRASRAPHTLYVLDEPTVGLSMADVEKLIHVLHRLVEAGNTVVVI
EHNLDVIAEADWLLDLGPEGGSGGGQLVAEGSPEHVVSLRERSHTGRVLS
EFLQQ
>BPP2025 uvrB, excinuclease ABC subunit B
MTAPGFVEFPDSPFHLYQPYPPAGDQPGAIDALTEGVSDGLMFQTLLGVT
GSGKTYTMANMIARLGRPALVLAPNKTLAAQLYAEMREFFPRNAVEYFVS
YYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTVIVGT
VSCIYGIGNPGDYHAMVLILRTGDRISRREVLARLVAMQYTRNDADFTRG
VFRVRGETIDIFPAESPELALRLTLFDDEIESLELFDPLTGRVRQKLPRF
TVYPGSHYVTPRETVLRAIETIKEELRERLAQLIADGKLVEAQRLEQRTR
FDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESH
VTIGQLGGMYRGDRSRKETLVQYGFRLPSALDNRPLRLEEFEARMRQCVF
VSATPAAYEQEHADNVVEQVVRPTGLVDPIVEVRPAHTQVDDLLGEIHKR
AALQERVLVTTLTKRMAEDLTDFLSEHGVRVRYLHSDIDTVERVEIIRDL
RLGVFDVLVGISLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITDSMRRAIDETERRRAKQIQHNTDHGITARGVSKA
VRELIDGVVAPAGHDALESAVPAEVLTDEKAMAREIRRLEKLMMDHARNL
EFEQAAAARDALNALKSRLLLDGVG
>BPP1765 uvrC, putative excinuclease ABC subunit C
MYRHLDAAGEVMYVGKARDLKKRVSSYFQKNLASPRIAQMVAKVASVDVT
VTRSEAEALLLENNLIKSLRPRYNILFRDDKSYPYLLITGHAWPRIAYYR
GATSKRGQYFGPYPNSWAVRETIQILQKVFRLRTCEDTVFANRSRPCLLH
QIGRCSAPCVGVIEAGDYAHDVQRAVRFLNGEAREVMDEIEARMLQASTE
LRFEEAAVLRDQMGSLSKVLHQQTMENVGGDDTDVIAVASAGGKICVNLA
MVRGGRHLGDKPFFPTHAEGEQPAQVLEAFVAQHYADGAMPPVLVCSHAL
PDSGLVGLLAEQGGTRAARVLTRPQGVRRSWLEQAQKNAEMALARALTES
GARAGRTLALAEALDLDTDEESLDALRIECFDISHTAGEATQASCVVFLH
HDMQPSLYRRYNIVGITPGDDYAAMRQVLTRRFGKVADGEAPMPGLVLID
GGKGQVEVARQVFVELGLDIQSLVGVAKGEGRKVGLETLVFADGRPPVAL
GKESAALMLIAQVRDEAHRFAITGMRARRAKTRNVSRLEEIEGIGARRRQ
RLLARFGGLSGVSSASIEDLASVEGISQELAVRIYDALHG
>BPP1990 uvrD, DNA helicase II
MMLEKLNPEQRAAVTLEPQHALVLAGAGSGKTRVLTTRMAWLIQTGQASP
FALLAVTFTNKAAREMLTRMSTLLPIDTRGLWIGTFHGLCNRMLRAHHRD
AGLPQAFQILDTTDQLAAIKRLLKAGNIDDEKYPPRDVQRFINGAKEEGL
RPGDVEAYDPHRRKLIEIYQLYEAQCQREGVVDFAELLLRAYELLSRNAP
VREHYQRRFRHILVDEFQDTNTLQYKWLRLLAGTGAAIFAVGDDDQSIYA
FRGANVGNMADFERDYAHGRVIRLEQNYRSYGHILDSANALIGHNTGRLG
KNLWTEQGEGEPVRVIEQPSDGMEAQWLVDEIRALINDGRMRSEIAVLYR
SNAQSRVLEHALFSVGIPYKVYGGLRFFERQEIKHALAYLRLIANPNDDT
SWMRVVNFPTRGIGARTLEQLSDAARAHDTSLFGAVARVGGKGGSNLAQF
AQLIGQMAHDTRELPLPELVDHVIEASGLKAHYQTEREGAERLENLNELI
TAATVFAAEENFEGLPAGVVPDHDVSGALMPGVVDAPQPDTLGGLTPLAA
FLSHAALEAGDNQAQVGQDAVQLMTVHAAKGLEFDAVFITGLEEGLFPHE
NSIMEPAGLEEERRLMYVAITRARERLYLSLAQSRMLHGQTRYAMRSRFL
EEIPEQHLKWLSPRAGLHQGGGFGGAASAWSSRGDAFGRKPTGTAAPRQP
RGMASGVTVGEQQFRVGQGVRHARFGDGTIIGLSGSGQDAQAQIQFRDVG
AKTLALGIAKLDIITA
>BPP1212 xerD, integrase/recombinase
MSSSAPLASQADLDAFIDAVWLEDGLAANTLAAYRRDLSAFAQWLENPAC
HPGLATGHSLREAGKGDIEAWFAARHAESRATTANRRLAALRRFYAWALR
ERLTPSDPCLTLVTAKQPPRLPKTLSEAQVDALLQAPDLDTARGLRDRAM
LETLYATGLRVSELVSVKALDVSLNEGVVRVVMGKGGKDRLVPLGAEAAH
WIERYAGSARPELLGARVADALFVTARAEPMSRQAFWQLVKKYALAADIR
APLSPHVLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVACERLK
ALHAAHHPRA
>BPP2566 xseA, exodeoxyribonuclease large subunit
MTIGLSVTNDVFARDILTVAQLNQAVGQLLERSIPSLWVRGEISNFTQAA
SGHWYFTLKDSRAAVRTVMFRSRAAQVGFVPRPGDQVEVRARVSLYEPRG
DYQLQADGMRRAGVGNLYEAFLRLKAQLQDEGLFDPQRKRQPARLPRAIG
VVTSLHAAALRDVLSALARRAPQVPVIIYPAPVQGADAAARLAARVAQAN
QRAEVDTLLLVRGGGSIEDLWSFNDEALAREVAASDIPVISGVGHETDFT
IVDFVADLRAPTPTAAAELACVPRGDLLAALRHTAERLARAQQRRLDQAA
QRLDRAAAMLTSPAQRLAHQQERLNTLRHRLASAWRGPQGRRVARLDMLA
QRLAHRRPDTGRAAERSAALLAQLGRAQARLAAARQARLDTLAAQLRALD
PQHTLARGYAIVRDAAGAIVTDATRLAARDRIEIAVARGRIGADVTDIGT
PDGTDGNPALRRG
>BPP2462 xseB, exodeoxyribonuclease VII small subunit
MASSKQADPQTDARPLPQDFETALAELESLVSAMENGTLPLEQSLSAYRR
GVELARVCQDRLAQAEQQVKVLEGDLLRPLDPAALDDE
>BPP1264 yeeB, conserved hypothetical protein
MSNRIDQSVPSVSVTYARNGASTKANALGMRPMQERAYEKRGEQYLLIKS
PPASGKSRALMFVALDKLKNQGLKQAIIVVPEKSIGASFNDEPLSKYGFW
ADWQVEPKWNLCNAPGNDNGGKVKSLGAFLEGDDKVLVCTHATFRFAVDA
YGVEAFDDRLIAVDEFHHVSANPDNKLGLHLGQFFARGKTHIVAMTGSYF
RGDAEAVLAPQDESKFDTVTYTYYEQLNGYEYLKQLDIGYFFYSGPYVDD
ILNVLDPAEKTIIHIPNVNSRESTKDKMREVEHIIEALGEWQGIDAATGF
QLVKRPDGRVLRIADLVDDDAAKRDRVSAALKDPAQKNNRDYVDIIIALG
MAKEGFDWIWCEHALTVGYRASLTEIVQIIGRATRDAPGKTRARFTNLIA
EPDAAEEAVTEVVNDTLKAIAASLLMEQVLAPRFEFKPKNPDSGPTPGFN
YGEDGYDADRCNVGVNEQTGAYQIEIKGLAEPKSKEAARICQEDLNEVIA
AFVQDKPTIERGLFDEELVPEELTQVRMGKIIKDKYPELDAEDQEAVRQH
AIAALNLTQQAKRLVTEGEGDGSPNTALIDGVRRFAMDVRELDIDLIDRI
NPFGEAYAILAKTMSEDSLKQVAAAISAKRTSLTPDEAKEMAVRAVQFKK
ERGRIPALDSQDAWERRMAEGAAAFMRFKAEGRYA