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2024-05-02 10:04:40

Gene list

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COG category: Replication, recombination and repair
Organism: Mycoplasma mycoides subsp. mycoides SC str. PG1, PG1

Number of genes found: 159

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Mycoplasma mycoides subsp. mycoides SC str. PG1, PG1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA MSC_0418 Conserved putative prolipoproteinchromosome CDS472626 1431 + 0.255765
NA MSC_0186 DNA methylasechromosome CDS220595 1989 + 0.224233
NA MSC_0947 Deoxyribonuclease, TatD relatedchromosome CDS1077275 798 + 0.220551
NA MSC_0282 conserved hypothetical transmembrane proteinchromosome CDS322984 819 + 0.19536
NA MSC_0963 Conserved hypothetical proteinchromosome CDS1091553 5919 + 0.254097
NA MSC_0656 Conserved hypothetical proteinchromosome CDS749513 1932 + 0.175466
NA MSC_0219 DNA METHYLASEchromosome CDS252626 573 - 0.197208
NA MSC_0279 Conserved hypothetical transmembrane proteinchromosome CDS317821 1809 + 0.171365
NA MSC_0033 Predicted permeasechromosome CDS37983 5388 + 0.233853
NA MSC_0776 Conserved hypothetical prolipoproteinchromosome CDS874563 2349 - 0.221371
NA MSC_0316 Conserved hypothetical transmembrane proteinchromosome CDS359752 3141 + 0.194842
NA MSC_0813 putative variable surface proteinchromosome CDS921047 1524 - 0.248031
NA MSC_0446 Hypothetical proteinchromosome CDS500642 768 + 0.209635
NA MSC_0576 Hypothetical proteinchromosome CDS650144 624 - 0.173077
NA MSC_0923 Conserved hypothetical transmembrane proteinchromosome CDS1048881 831 + 0.216606
NA MSC_0455 putative ATPase, AAA familychromosome CDS511312 1236 + 0.23301
NA MSC_0205 hypothetical proteinchromosome CDS239887 582 - 0.223368
NA MSC_0810 Putative variable surface proteinchromosome CDS915788 1524 - 0.248031
NA MSC_0575 Hypothetical prolipoproteinchromosome CDS648468 1026 + 0.246589
NA MSC_0639 hypothetical proteinchromosome CDS735721 417 - 0.196643
NA MSC_0370 conserved hypothetical proteinchromosome CDS421668 1545 - 0.197411
NA MSC_0190 Conserved hypothetical proteinchromosome CDS225417 522 + 0.195402
NA MSC_0410 DNA-binding protein HU (HB)chromosome CDS465358 273 + 0.271062
NA MSC_0207 Hypothetical proteinchromosome CDS241180 345 - 0.26087
NA MSC_0658 Conserved hypothetical proteinchromosome CDS752052 2142 + 0.223156
NA MSC_0631 Conserved hypothetical proteinchromosome CDS723524 1437 - 0.254697
NA MSC_0197 Conserved hypothetical proteinchromosome CDS233536 1650 - 0.228485
NA MSC_0402 Conserved hypothetical proteinchromosome CDS455051 2139 + 0.246377
NA MSC_0945 conserved hypothetical proteinchromosome CDS1074468 960 + 0.157292
NA MSC_0005 Hypothetical purine NTPasechromosome CDS4156 1092 + 0.215201
NA MSC_0255 conserved hypothetical proteinchromosome CDS290638 432 + 0.243056
NA MSC_0236 Hypothetical proteinchromosome CDS269568 684 + 0.20614
NA MSC_0003 Primase-related proteinchromosome CDS2766 534 + 0.189139
NA MSC_0949 Conserved hypothetical proteinchromosome CDS1078579 939 - 0.227902
NA MSC_0572 Hypothetical proteinchromosome CDS645420 171 + 0.263158
NA MSC_0522 Hypothetical surface located membrane proteinchromosome CDS595676 1551 + 0.25403
dam MSC_0951 Adenine-specific DNA-methyltransferasechromosome CDS1080407 744 + 0.267473
dcm MSC_0216 Cytosine-specific DNA-methyltransferase Sau96Ichromosome CDS249451 1026 - 0.27193
dcm MSC_0950 Cytosine-specific DNA-methyltransferasechromosome CDS1079671 351 + 0.264957
deaD MSC_0469 ATP-dependent RNA helicasechromosome CDS531597 1362 + 0.202643
dinP MSC_0549 DNA polymerase IVchromosome CDS622050 1209 - 0.206782
dnaA MSC_0001 Chromosomal replication initiator protein DnaAchromosome CDS1 1440 + 0.233333
dnaB MSC_0681 Chromosome replication initiation/membrane attachment proteinchromosome CDS779450 1185 - 0.178059
dnaC MSC_0956 replicative DNA helicase DnaCchromosome CDS1084096 1317 + 0.270311
dnaE MSC_0684 DNA polymerase III alpha chainchromosome CDS784370 2964 - 0.193995
dnaG MSC_0465 DNA primasechromosome CDS526787 1839 + 0.208809
dnaI MSC_0680 PRIMOSOMAL PROTEINchromosome CDS778502 939 - 0.190628
dnaN MSC_0002 DNA POLYMERASE III, BETA CHAINchromosome CDS1602 1128 + 0.20922
dnaX MSC_0048 DNA polymerase III gamma-tau subunitschromosome CDS57351 1959 - 0.215416
fpg MSC_0682 formamidopyrimidine-DNA glycosylasechromosome CDS780791 825 - 0.21697
gyrA MSC_0007 DNA Gyrase Subunit Achromosome CDS7527 2505 + 0.268663
gyrB MSC_0006 DNA Gyrase Subunit Bchromosome CDS5607 1905 + 0.283465
holB MSC_0045 DNA polymerase III delta subunitchromosome CDS55398 741 - 0.191633
ligA MSC_0764 DNA ligasechromosome CDS859409 2007 - 0.226208
lpp MSC_0625 Prolipoproteinchromosome CDS711732 2580 - 0.270155
lpp MSC_0617 Prolipoproteinchromosome CDS700614 2499 + 0.230892
lpp MSC_0540 Prolipoproteinchromosome CDS615070 540 - 0.275926
lpp MSC_0775 Prolipoproteinchromosome CDS872132 2184 - 0.249084
lpp MSC_0419 prolipoproteinchromosome CDS474159 1224 + 0.205882
lppQ MSC_1046 Prolipoprotein Qchromosome CDS1189659 1338 + 0.238416
lppQ MSC_1021 Prolipoprotein Qchromosome CDS1165902 1338 + 0.238416
mod MSC_0200 adenine-specific DNA-methyltransferasechromosome CDS236587 669 - 0.186846
nfo MSC_0105 endodeoxyribonuclease IVchromosome CDS123038 870 - 0.236782
parC MSC_0511 TOPOISOMERASE IV SUBUNIT Achromosome CDS580809 2697 + 0.237671
parE MSC_0510 DNA TOPOISOMERASE IV SUBUNIT Bchromosome CDS578876 1932 + 0.254658
pcrA MSC_0769 ATP-dependent DNA helicasechromosome CDS865713 2169 - 0.219917
pkn MSC_0307 serine/threonine protein kinasechromosome CDS349801 1116 - 0.212366
polA MSC_0091 DNA POLYMERASE I, 5'-3' exonucleasechromosome CDS110260 915 + 0.217486
polA MSC_0683 DNA POLYMERASE Ichromosome CDS781626 2736 - 0.215278
polC MSC_0355 DNA polymerase III alpha chainchromosome CDS402847 4449 - 0.242976
recA MSC_0421 recombination protein recAchromosome CDS476358 1038 + 0.253372
recD MSC_0649 EXODEOXYRIBONUCLEASE V ALPHA CHAINchromosome CDS743547 957 - 0.208986
recD MSC_0512 Exodeoxyribonuclease V alpha subunitchromosome CDS583601 2196 + 0.203552
recO MSC_0463 DNA repair protein recOchromosome CDS524569 750 + 0.174667
recR MSC_0047 DNA REPAIR PROTEIN RecRchromosome CDS56990 369 - 0.200542
rnhB MSC_0430 ribonuclease H IIchromosome CDS483996 624 + 0.232372
ruvA MSC_0542 holliday junction DNA helicase RuvAchromosome CDS616160 561 + 0.194296
ruvB MSC_0543 Holliday junction DNA helicase RuvBchromosome CDS616737 924 + 0.203463
ssb MSC_0026 Single-strand binding proteinchromosome CDS30425 441 - 0.281179
tnp IS1138-like MSC_0699 transposase (IS1138-like)chromosome CDS802312 645 + 0.262015
tnp IS1634aa MSC_0551 Transposase IS1634AAchromosome CDS626291 1674 - 0.261051
tnp IS1634ab MSC_0538 Transposase IS1634ABchromosome CDS611283 1674 - 0.258662
tnp IS1634ac MSC_0245 Transposase IS1634ACchromosome CDS278430 1521 + 0.262985
tnp IS1634ad MSC_0520 Transposase IS1634ADchromosome CDS592950 1674 - 0.262843
tnp IS1634ae MSC_0363 Transposase IS1634AEchromosome CDS414742 1674 - 0.261051
tnp IS1634ag MSC_0249 Transposase IS1634AGchromosome CDS284174 1674 + 0.261649
tnp IS1634al MSC_0859 Transposase IS1634ALchromosome CDS976699 1674 + 0.262246
tnp IS1634am MSC_0785 Transposase IS1634AMchromosome CDS886378 1674 + 0.260454
tnp IS1634ap MSC_0098 Transposase IS1634APchromosome CDS117662 1674 - 0.259857
tnp IS1634as MSC_0672 Transposase IS1634ASchromosome CDS768960 1674 - 0.259857
tnp IS1634au MSC_0797 TRANSPOSASE IS1634AUchromosome CDS898542 1674 - 0.261051
tnp IS1634av MSC_0981 Transposase IS1634AVchromosome CDS1119052 1674 + 0.261051
tnp IS1634aw MSC_0332 Transposase IS1634AWchromosome CDS380077 1674 - 0.261649
tnp IS1634ax MSC_0862 Transposase IS1634AXchromosome CDS982422 1674 - 0.261051
tnp IS1634ay MSC_0802 Transposase IS1634AYchromosome CDS905712 1674 - 0.258662
tnp IS1634az MSC_0876 Transposase IS1634AZchromosome CDS998605 1674 - 0.262246
tnp IS1634bg MSC_1003 Transposase IS1634BGchromosome CDS1139675 1674 + 0.258065
tnp IS1634bh MSC_0605 Transposase IS1634BHchromosome CDS686876 1674 - 0.261051
tnp IS1634bk MSC_0060 Transposase IS1634BKchromosome CDS69594 1674 + 0.261649
tnp IS1634bl MSC_0685 Transposase IS1634BLchromosome CDS787643 1674 - 0.259259
tnp IS1634bm MSC_0697 Transposase IS1634BMchromosome CDS799711 1524 + 0.264436
tnp IS1634bn MSC_0976 Transposase IS1634BNchromosome CDS1113135 1674 - 0.261649
tnp IS1634bo MSC_0097 Transposase IS1634BOchromosome CDS115276 1674 + 0.259857
tnp IS1634bp MSC_0172 Transposase IS1634BPchromosome CDS200977 1674 + 0.259259
tnp IS1634bq MSC_0969 Transposase IS1634BQchromosome CDS1105433 1674 - 0.260454
tnp IS1634br MSC_0342 Transposase IS1634BRchromosome CDS391128 1674 + 0.259857
tnp IS1634bt MSC_0038 Transposase IS1634BTchromosome CDS47780 1674 + 0.262246
tnp IS1634bv MSC_0074 Transposase IS1634BVchromosome CDS88758 1674 + 0.261051
tnp IS1634bx MSC_1011 Transposase IS1634BXchromosome CDS1155085 1674 + 0.259857
tnp IS1634by MSC_0934 Transposase IS1634BYchromosome CDS1059446 1674 - 0.261649
tnp IS1634bz MSC_0168 Transposase IS1634BZchromosome CDS196693 1674 + 0.260454
tnp IS1634ca MSC_0602 Transposase IS1634CAchromosome CDS683271 1674 + 0.259259
tnp IS1634cb MSC_0989 Transposase IS1634CBchromosome CDS1128034 1674 - 0.259857
tnp IS1634cd MSC_0921 Transposase IS1634CDchromosome CDS1045726 1590 - 0.258491
tnp IS1634ce MSC_0871 Transposase IS1634CEchromosome CDS991858 1674 - 0.261051
tnp IS1634chbz MSC_0814 Transposase IS1634CHBZchromosome CDS922863 1674 + 0.261051
tnp IS1634ci MSC_0822 TRANSPOSASE IS1634CIchromosome CDS934367 1674 + 0.262246
tnp IS1634cm MSC_1036 Transposase IS1634CMchromosome CDS1178842 1674 + 0.259857
tnp ISMmy1a MSC_1031 Transposase ISMmy1Achromosome CDS1173518 1413 + 0.249115
tnp ISMmy1b MSC_0230 Transposase ISMmy1Bchromosome CDS263779 1413 + 0.251238
tnp ISMmy1c MSC_0808 TRANSPOSASE ISMmy1Cchromosome CDS912641 1413 - 0.249823
tnp ISMmy1d MSC_0781 Transposase ISMmy1Dchromosome CDS881302 1086 - 0.253223
tnp ISMmy1e MSC_0123 transposase ISMmy1Echromosome CDS145487 1413 - 0.250531
tnp ISMmy1f MSC_0571 Transposase ISMmy1Fchromosome CDS643446 1413 - 0.251946
tnp ISMmy1g MSC_0796 TRANSPOSASE ISMmy1Gchromosome CDS896702 1446 - 0.251037
tnp ISMmy1i MSC_1056 Transposase ISMmy1Ichromosome CDS1197275 1413 + 0.249115
tnp is1634ba MSC_0070 Transposase IS1634BAchromosome CDS80179 1524 - 0.265092
tnpA IS1296ab_b MSC_0662 Transposase IS1296AB_B (ORFA)chromosome CDS756756 543 + 0.239411
tnpA IS1296ac_r MSC_0898 Transposase IS1296AC_R (ORFA)chromosome CDS1021035 543 + 0.241252
tnpA IS1296ds MSC_0905 Transposase IS1296DS (ORFA)chromosome CDS1027722 543 - 0.237569
tnpA IS1296eh MSC_0141 Transposase IS1296EH (ORFA)chromosome CDS165395 543 + 0.239411
tnpA IS1296fj MSC_0238 Transposase IS1296FJ (ORFA)chromosome CDS272114 486 + 0.230453
tnpA IS1296gz MSC_0851 Transposase IS1296GZ (ORFA)chromosome CDS967678 543 + 0.241252
tnpA IS1296ie MSC_0056 Transposase IS1296IE (ORFA)chromosome CDS67790 555 - 0.246847
tnpA IS1296ll MSC_0630 Transposase IS1296LL (ORFA)chromosome CDS722738 543 - 0.239411
tnpA IS1296mp MSC_0138 Transposase IS1296MP (ORFA)chromosome CDS161748 543 - 0.233886
tnpA IS1296px MSC_0232 Transposase IS1296PX (ORFA)chromosome CDS265991 543 - 0.239411
tnpA IS1296qt MSC_0674 Transposase IS1296QT (ORFA)chromosome CDS771518 543 - 0.241252
tnpA IS1296sq MSC_0016 Transposase IS1296SQ (ORFA)chromosome CDS23010 543 - 0.239411
tnpA IS1296uk MSC_0173 Transposase IS1296UK (ORFA; extended into IS1634BPchromosome CDS202677 585 + 0.246154
tnpB IS1296ab_b MSC_0663 Transposase IS1296AB_B (ORFB)chromosome CDS757307 849 + 0.242638
tnpB IS1296ac_r MSC_0899 Transposase IS1296AC_R (ORFB)chromosome CDS1021586 861 + 0.247387
tnpB IS1296ds MSC_0904 Transposase IS1296DS (ORFB)chromosome CDS1026853 861 - 0.246225
tnpB IS1296fj MSC_0239 Transposase IS1296FJ (ORFB)chromosome CDS272665 861 + 0.246225
tnpB IS1296hv MSC_0844 Transposase IS1296HV (ORFB)chromosome CDS958259 861 + 0.24971
tnpB IS1296ie MSC_0055 transposase IS1296IE (ORFB)chromosome CDS66921 861 - 0.247387
tnpB IS1296ji MSC_0211 Transposase IS1296JI (ORFB)chromosome CDS244133 861 - 0.248548
tnpB IS1296ll MSC_0629 Transposase IS1296LL (ORFB; extended)chromosome CDS721854 876 - 0.25
tnpB IS1296mp MSC_0137 Transposase IS1296MP (ORFB)chromosome CDS160879 861 - 0.248548
tnpB IS1296od MSC_0246 Transposase IS1296OD (ORFB)chromosome CDS280596 861 + 0.247387
tnpB IS1296sq MSC_0015 transposase IS1296SQ (ORFB)chromosome CDS22141 861 - 0.247387
tnpB IS1296uk MSC_0174 Transposase IS1296UK (ORFB)chromosome CDS203270 861 + 0.246225
topA MSC_0931 DNA topoisomerase Ichromosome CDS1055842 1932 - 0.253106
ung MSC_0496 uracil-DNA glycosylasechromosome CDS562248 654 + 0.203364
uvrA MSC_0943 excinuclease ABC subunit Achromosome CDS1069344 2841 - 0.259416
uvrB MSC_0944 Excinuclease ABC subunit Bchromosome CDS1072193 2016 - 0.260913
uvrC MSC_0297 excinuclease ABC subunit Cchromosome CDS336756 1755 - 0.205698
xseA MSC_0101 exodeoxyribonuclease VII large subunitchromosome CDS120082 1410 - 0.239007
xseB MSC_0100 Exodeoxyribonuclease VII small subunitchromosome CDS119877 216 - 0.240741