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# Vibrio cholerae O1 biovar eltor str. N16961, N16961

>gid:28677  VC0012  chromosomal DNA replication initiator DnaA
MSEGIVSSSLWLQCLQRLQEELPAAEFSMWVRPLQAELNDNTLTLFAPNR
FVLDWVRDKYLNNINRLLMEFSGNDVPNLRFEVGSRPVVAPKPAPVRTAA
DVAAESSAPAQLAQRKPIHKTWDDDSAAADITHRSNVNPKHKFNNFVEGK
SNQLGLAAARQVSDNPGAAYNPLFLYGGTGLGKTHLLHAVGNAIVDNNPN
AKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDDIQFFANKER
SQEEFFHTFNALLEGNQQIILTSDRYPKEISGVEDRLKSRFGWGLTVAIE
PPELETRVAILMKKAEDHQIHLPDEVAFFIAKRLRSNVRELEGALNRVIA
NANFTGRPITIDFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKVADLL
SKRRSRSVARPRQLAMALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIE
QLREESHDIKEDYSNLIRTLSS
>gid:28678  VC0013  DNA polymerase III, beta chain
MKFTIERSHLIKPLQQVSGTLGGRASLPILGNLLLKVEENQLSMTATDLE
VELISRVTLEGEFEAGSITVPARKFLDICRGLPDSAVITVLLEGDRIQVR
SGRSRFSLATLPASDFPNIEDWQSEVQVSLTQAELRGLIEKTQFSMANQD
VRYYLNGMLFEIDGTTLRSVATDGHRMAVAQAQLGADFAQKQIIVPRKGV
LELVKLLDAPEQPVVLQIGHSNLRAEVNHFVFTSKLVDGRFPDYRRVLPQ
HTSKTLQTGCEELRQAFSRAAILSNEKFRGVRVNLADNGMRITANNPEQE
EAEELLDVSFEGEPIEIGFNVSYILDVLNTLRCDNVRVSMSDANASALVE
NVDDDSAMYVVMPIRL
>gid:28679  VC0014  recF protein
MPLSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGR
SFKSSLTGRIIQNECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEV
KIGGQTGQKLAQLAQILPLQLIHPEGFELLTDGPKQRRAFIDWGVFHTEP
AFFDAWGRFKRLSKQRNALLKSAQSYRELSYWDQELARLAEQIDQWRESY
VNQLKNVAEQLCRTFLPEFDIDLKYYRGWEKDQPYQSILEKNFERDQQLG
YTFSGPNKADLRIKVNATPVEDVLSRGQLKLMVCALRVAQGQHLTELTGK
QCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESS
KTFHVAHGVIEQG
>gid:28680  VC0015  DNA gyrase, subunit B
MSNNYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDE
ALAGYCKDIVVTIHEDNSVSVSDDGRGIPTEMHPEEKVSAAEVIMTVLHA
GGKFDDNSYKVSGGLHGVGVSVVNALSEKVLLTIYRGGKIHSQTYHHGVP
QAPLAVVGETERTGTTVRFWPSAQTFTNIEFHYDILAKRLRELSFLNSGV
SIKLTDEREEDKKDHFMYEGGIQAFVTHLNRNKTPIHEKVFHFNQEREDG
ISVEVAMQWNDGFQENIYCFTNNIPQRDGGTHLAGFRGALTRTLNNYMDK
EGFSKKAQAATSGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAV
ESAMNEKLADFLAENPSEAKNVCSKIIDAARAREAARKAREMTRRKGALD
LAGLPGKLADCQEKDPALSELYIVEGDSAGGSAKQGRNRKNQAILPLKGK
ILNVEKARFDKMLSSQEVATLITALGCGIGRDEYNPDKLRYHNIIIMTDA
DVDGSHIRTLLLTFFYRQMPELIERGYIYIAQPPLYKVKKGKQEQYIKDE
EAMNQYQVALAMDGAELHVNADAPALAGEPLEKLVQQYNAAIKLVERMSR
RYPYAMLHELIYVPRINAELCADKAAVEAWTQRLVEQLNAKEVGASQYSV
LVEHNAELNVYLPKIQVRTHGVTHEYLLSADLINSKEYAKLADLSEALDG
LIEAGAFIKRGERVQPISSFAAALDWLIKESRRGLSIQRYKGLGEMNPDQ
LWETTMDPETRRMMQVTIEDAVGADELFTTLMGDQVEPRRAFIETNALKV
ANLDV
>gid:28713  VC0048  smf protein
MKDQDLAAWLALCFTPKLGSKTISHLLATRLPAQLQSFTPKQWLACGLKP
EQLVFLTTQAAKQAEQCLQWRSAANNRYIVTPHCPLYPRLLKEINSSPPV
LFIEGIWEAVHDPAVAIVGSRNASVDGRQIARQFATELAQSGLVVTSGLA
LGIDGYAHDGALQAQGQTVAVLGSGLAQVYPKQHQGLAERIIAQGALVSE
FAPHTPPKADHFPRRNRIISGLSLGVVVVEAAEKSGSLITARYAAEQGRE
VFVVPGSIFNAASQGSNQLIRQGACLVQSVQQIHQELKNALTWSLSEQVP
YQATLFSAVQSDEELPFPELLANVGIEATPIDILASRTQIPVQDIMMQLL
ELELLGHVVAVPGGYIRKGRG
>gid:28715  VC0050  DNA topoisomerase I-related protein
MSMSRKIDPQLFAAHEHALQSSPCPQCGAALQLRHGKHGPFLGCTAYPEC
DYIKPLHQNDGHIIKELGVPCPECGHELVLRQGRYGMFIGCSHYPQCHHI
ESMDSPSQEETSPDILCPECGKGHLIERKSRFGKLFYACDAYPKCKFALN
SKPIAQACAQCGFTVMVEKKSAAGMRYQCANRQCGHIQEC
>gid:28774  VC0103  conserved hypothetical protein
MIDTHAHVYASEFDHDRDEVIARARQVGIEKILMPNIDLNSIAPMLATEK
AYPDLCHSMMGLHPCYVDANVKQTLATIYEWFSRHTFIAVGEIGIDLYWD
KTFKAEQEMAFLTQLNWAKELDLPVVIHTRDSLNETLALLKQAQDGRLRG
VFHCFGGSVDEAKAINDLGFHLGIGGVSTFKNSGMDQVIPQLDLNYVILE
TDCPYLAPVPHRGKRNEPMLTHLISEKVAQLRSLPLGEVIKITNNNSKAL
FGLDK
>gid:28779  VC0108  DNA polymerase I
MAHIPDNPLILIDGSSYLYRAFHAYPGTMSNGEIPTNAIYGVVNMIRSMM
RQFASDRMAVIFDAKGKTFRDEMYDQYKAHRPPMPDELRCQVEPLHQVIR
AMGLPLLAIEGVEADDVIGTLARQASQAGMPVLISTGDKDMAQLVDDNIT
LINTMTNVVLDREGVIEKFGIPPELIIDYLALMGDKVDNIPGVPGVGEKT
ATALLQGIGGLEALYANLDKIAALGFRGSKTMAQKLEENRGNAKLSYQLA
TIKCDVELEESPQTLLKQTPDRDALMSLYGKLAFKSWLTELLDGGTGIVT
ADEQTKTSSVTVSTAATHAAAIPESPAAHIDRSQYQTILNEQDFQLWLEK
LKQAELFAFDTETDNLDYMVANLVGMSFAVAEGEAAYLPVAHDYLDAPQQ
LERDWVIAQLKPLLEDESKAKVGQNLKYDASVMARYGVELRGIRHDTMLQ
SYVYNSVGGKHDMDSLALRFLQHSCISFEQVAGKGKNQLTFNQIALEEAA
QYAAEDADVTLRLHQRIHPLIEQDAKLEQVYREIEMPLVPVLSRIERTGV
MIDDMLLSAQSQEIALRLDQLEQNAYELAGQPFNLSSPKQLQTILFEQMK
LPVLQKTPSGTPSTNEEVLQELALDYPLPKVLIEYRGLAKLKSTYTDKLP
KMINPSTGRVHTSYHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFVA
PHGWKIMAVDYSQIELRIMAHLSGDQALLDAFRDGKDIHAATAAEIIGVP
IDQVSSEQRRRAKAVNFGLIYGMSAFGLAKQLGIPRGEAQEYMDKYFERY
PGVMQYMEDTRSRAAQLGYVETIFGRRLHLPEITSRNAMRRKAAERAAIN
APMQGTAADIIKKAMLLVDEWIEREGDGRVKLLMQVHDELVFEVKESSLS
EIESKVQQLMESAAELAVPLVAEAGHGDNWEQAH
>gid:28786  VC0115  conserved hypothetical protein
MMNGMLLASVGGAIIVALASYAAYLLWQVKKQQALQRQQQQLAIEKRNAN
IFDSVNILCMAGIQGQCDLSEISIRVYCIMDYVQGEQRINFEQEYPAISE
LYHVVKNMPRGEARQQLPKQERMKQNLERTKAESRLQDAIIVELTALKQR
IQPLNNQIAIQMV
>gid:28798  VC0128  integrase/recombinase XerC
MKNDERTPLPDALAQPLERFYAYLHTEKGLSLYTQRNYKQQLETMTQYLV
QVGLTHWTQLDSAWVRQLVMQGKRQGMKASSIATRLSSLRSFLDFLILRG
ELQANPAKGVSAPRKQRTLPKNLDVDEMAQLLEVTDDDPLSIRDRAIMEL
MYGAGLRLAELVSIDIKDVNLSEGEIRVIGKGNKERKVWFAGQAQEWVGK
WLKLRSQLADSAETALFVSKLGTRISHRSVQKRMAEWGQKQAVASHISPH
KLRHSFATHMLESSNNLRAVQELLGHENIATTQIYTHLDFQHLAQVYDQA
HPRARKKNKDD
>gid:28816  VC0146  conserved hypothetical protein
MQRRRQPNPSQKKAPTGQVRIISGLWRGRKLPVHDAEGLRPTTDRVKETL
FNWLAQEVPNARCLDLFAGSGGLGFECASRQANQVTMLELNPLAFQQLKT
NVQSLKAENIELIHTDALAFLRQSGKPYDVVFIDPPFRQGLLQETTQLLE
QNGWLAPQAMIYIECEKELPLTELPPHWHLHREKSAGQVCYRLFIREEQ
>gid:28841  VC0167  ATP-dependent DNA helicase Rep
MKLNPRQDEAVKYVSGPCLVLAGAGSGKTRVITNKIAYLVQQCGYKARNI
AAVTFTNKAAREMKERVAQTLGKGESRGLMVSTFHTLGLNIIRREFKALG
LKAGFSLFDDQDQLALLKELTEKQLDGDKDLLRLLLSTISNWKNDMLTPP
QAKAMAKGEQQLLFAHCFELYQKQMQSYNALDFDDLILLPVLLLRSNEEV
RQRWQNRIRYLLVDEYQDTNTSQYELVKLLVGERGRLTVVGDDDQSIYSW
RGAKPQNLVLLGEDFPSLKLIKLEQNYRSTSRILRAANILIANNPHVYQK
ALFSELAEGEKLKVILANNEDHEAERVIAEIIAHKFLNRTEYRDYAILYR
GNHQSRLIEKSLTQNRVPYKLSGGTSFFARAEIKDIMAYLRVLVNPDDDN
AFLRIVNTPKREIGPATLEKLGSYANMRGKSLFTASFELGLEQHLSGRGL
ENLRRFTEWLVAIADNAERGNTVEAVRALVRDIRYEDWLYETSASPKAAE
MRMKNVSDLYSWIVADLEGDNPDQQEKTLKEVVQRLTLRDMMERGEENDD
SDAVQLMTLHASKGLEFPYVYLIGAEEGILPHQTSIDEENVEEERRLMYV
GITRAQRELTFIVCKERRQFGELIKPSQSRFLDELPQDDIEWEVKKKPVT
QEERMAKGQAHIANLRAMFKK
>gid:28856  VC0177  hypothetical protein
MRRSMKISAEMYKLLIERTLDGFSVIELRDEFIVIKDSLIDPDEAYKKVY
RQILRFIKKGWLNGEGSGRQKRYFQTDTFKALHAEPKSENVDIEIVLNQD
YSVLVSERNQYKGELEIVLGEIDEYQSLNIRFPELEPKLITLLDEAKERS
ACLLGKVNGLTNVLKVLSGQKIVHQKFKTKALLFERT
>gid:28864  VC0185  transposase, putative
METGMVTVVNSNNFDVPRIYPPSSKSTSIHLTGFPTFYSKDHEYLLPVNL
WFNYLVNIRKAVDITASVRALKRYWQFLETNNYSWDNFPANDYLKPTYRF
RNDDLLKAARSGEIAFSTASMYILHVIKFYEWAAHERFITFTEENKPFNY
QIVHIANSGMMSHNNPRFTVRSTDLRIRKPARNEQQKLNPLSQQELLFFA
DCLKECSDEFIIHQLLQIQSGLRVEEACTFPFSIVEMPNPHIHRYEVEIG
IHNGVHTKFNKTRKVEIPNQLMRKMYDYSVSERRLKREKKTDGVNKTLLL
NNLGNPLCSNNIQQHFRRLRHHIQNKHNIVFSHRTHDLRATYGTYRLDSL
LDHLPVGDALALIMGWMGHKDDKTTWKYLRYLRKEKANQNAIVMLDQILE
EAML
>gid:28869  VC0190  DNA helicase II
MIDPSLLLDGLNDKQREAVAAPLENLLILAGAGSGKTRVLVHRIAWLMSV
EEASPFSVMAVTFTNKAAAEMRGRIEELMHGTASGMWCGTFHGICHRILR
AHYLDAKLLEDFQIIDSDDQQRLLKRLIKAHNLDDKQWPARQVAWWINNQ
KDEGLRPTHINAFDPVTQTYLKLYTAYQEACDRAGLVDFAEILLRALELL
RGNQHIREHYQARFKHILVDEFQDTNAIQYAWLRMMAGAQSNVMIVGDDD
QSIYGWRGARVENIEKFTREFPSVNTIRLEQNYRSTKTILEASNTLIANN
SERMGKQLWTDGLVGEPISVYSAYNELDEARFVVSKIKGWQEQGGTLTDC
AILYRNNAQSRVLEEALLQASLAYRIYGGMRFFERQEIKDALSYLRLINN
RNDDTAFERVINTPPRGLGDKTLETIRFAARDRGCTLWDASVGLLNDQVL
TGRAASALSRFVELINALEEEGIDMPLHVLTDHAVKTSGLLEMYQQEKGE
KSKARIENLEELVTATRQFEKPEEAQEMTMLTAFLTHAALEAGEGQADEH
DDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLCY
VGMTRAMQKLYITYAEMRRLYGQDKYHKPSRFIRELPEGCLDEVRMKAQV
SRPTSTGRFSQTVVKESFNETGFNLGSRVRHPKFGEGTIINFEGSGPQSR
VQVAFNGEGIKWLVTAYARLEKV
>gid:28875  VC0196  ATP-dependent DNA helicase RecQ
MTLTLHSIDMTATLMAESSALFATPERVLHEVFGYQQFRVGQQEVIEAAL
AGRDSLVIMPTGGGKSLCYQIPALVLEGVTLVISPLISLMKDQVDQLKAN
GVAAECVNSTLAREELIAIYNRMHAGQLKLLYVSPERVLTAEFIERLSHL
PLAMIAVDEAHCISQWGHDFRPEYASLGQLKQRFPNVPVMALTATADDAT
RHDIMQRLQLNEPHQYLGSFDRPNIRYMLVEKHKPVSQVIRYLETQRGQC
GIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDADERAWVQEAFQRDDLQ
IVVATVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMM
LYDPADMNWLRRMLDEKPDGAQKQVESHKLTAMGAFAEAQTCRRQVLLNY
FGEYRDKPCGNCDICLDPPKRFDATEEARKALSCVYRVNQNFGIGYVVEV
LRGMQNIRIREHGHDKITTYGIGRDHSHDYWVSIFRQLIHKGMLYQNITR
NSTLQLTEEARPLLRGEMNIELAVPRLDTAARAAKSDKLSGKNYDKKLFA
KLRKLRKSIADDEGLPPYVVFSDATLIDMAEIMPTSYGEMLAVNGVGQRK
LEKYADPFLDLIQEHLTYHG
>gid:28896  VC0217  DNA repair protein RadC
MSLKQLPTESMPREKLLQRGPQSLSDAELLAIFLRTGTQGMNVLALADLL
LRDFGSLRALFCASKEQFCRHKGLGEAKFVQLQAVLEMTQRYLAETLKRG
DALTSPQQTKLYLSSVLRDRQREAFYILFLDNQHRVIRDEILFEGTIDAA
SVYPREVVKRALHHNAAAVILAHNHPSGVAEPSQADRRITDRLRDALGLV
EIRVLDHFVVGDGEVVSFAERGWI
>gid:28900  VC0221  formamidopyrimidine-DNA glycosylase
MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQLEGQTIL
AIHRRAKYLIIETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSG
KRLRYNDPRRFGAWLWCAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNK
RIAVKAFIMDNAAVVGVGNIYANESLFTSRLHPLRPAHSLSLEEWQTLVA
NIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVYGKAKQPCPHCGEP
LCEQKIAQRNTFFCPQCQH
>gid:28906  VC0227  conserved hypothetical protein
MQSKTAKLPDNDRNRPLIQTFNDAQQKVWFDDALLHEDPSQCCNPEFWQQ
NGKVLGSATGRGTTWFVQLQQTQGALRHYRRGGLFGKLVADSYWFTGWEK
TRSYQEFMLLNHLRDAGVNVPRPIAARVQKHGLLYKADLLSEKVPNARDL
VSILQESPISDELYRKIGREIRKMHDAQVNHTDLNIHNILIDDQEKVWII
DFDKCYVQIGDSWKQGNLKRLKRSFEKEVCKRGINWSLEAFAIISSYKHE
E
>gid:28932  VC0253  IS1004 transposase-related protein
MGDYRSSSHVYWRCKYHIVWTPRETA
>gid:28934  VC0256  transposase OrfAB, subunit A
MISSPHKLTGDIMTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVG
KSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILK
KATALLMSDSLNNS
>gid:28935  VC0257  transposase OrfAB, subunit B
MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEA
HAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRK
ASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFAR
KVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQ
LLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEI
TRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
>gid:28944  VC0266  conserved hypothetical protein
MLESLLTEIRQCTVCEPHLPLGANPVIRAHPAAKILIIGQAPGTKVHQTS
IPWNDASGERLRQWLGLDREAFYCEENIAIMPMGLCYPGKGRSGDLPPRK
ECAPLWHAKVLEQLPNRQLTLLIGQYAQHYYLSDKPSTLTETVQQWQRWA
PSVLPLPHPSPRNTLWLKNHPWFEQDIVPYLRQRVKQVLT
>gid:28951  VC0273  DNA-binding protein HU
MNKTQLIDFIAEKADLTKVQAKAALEATLGAVEGALKDGDQVQLIGFGTF
KVNHRSARTGRNPKTGEEIKIAAANVPAFVAGKALKDAIK
>gid:28967  VC0290  factor-for-inversion stimulation protein
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVTEL
YELVLAEVEQPLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
>gid:28976  VC0299  DNA polymerase III, epsilon subunit, putative
MARLSLSNSRLRWLMNWLLRRYWHAKLKGSPYQRLFETARHHEYVSLDCE
TTSLDPKRAELVTIAATKIVDNRIITSQPFEVRLCAPQSLDSGSVRIHRI
RHQDLHDGLSEKEALLQLIEFIGNRPLVGYHIRYDKTILDIACRKHLGFP
LPNRLIEVSQIYHDKLEKHLPNAYFDLSLEAICRHLDLPLQDKHDALQDA
IAAALVFVRLTKGDLPQFIAPGV
>gid:28982  VC0305  ATP-dependent RNA helicase RhlB
MKKTHITEHKFADFGLQPQVIDGLEKKGFVYCTPIQALALPVLLSGQDIA
GQAQTGTGKTLAFLTATFNHLLTTPAAEGRAETQPRAIIMAPTRELAIQI
FNDAEPLLASTGLKAALAYGGESYDKQLAKLQSGVDILIGTTGRIIDFYK
QRVFNLNHIQAVVLDEADRMFDLGFIKDIRFLFRRMPEPKDRLNMLFSAT
LSYRVQELAFEHMNNPEHVVVEPEQKTGHRIQEELFYPSNEHKMALLQTL
IEEEWPDRAIIFANTKHRCEQIWAHLAADNHRVGLLTGDVPQKKRERILE
QFTQGDVDILVATDVAARGLHIPQVTHVFNYDLPDDCEDYVHRIGRTGRA
GASGHSISFACEEYAINLPAIESYIEHAIPTSDYDPSALLTDLPAPLSLR
SSPQQRRTNTAGSRNSNNGGNRKPQQRRPRAPRPKKEA
>gid:29017  VC0331  MutT/nudix family protein
MIRLQAIRRSRVEKSDGKNAYWCVVSGSDLWLVDGQIPYGSAEQWDLPQE
KAILVDRYQNSPVYWLNAADIEQDRPLTSLRELLGVDEALFLAASKAVQY
GHMSQTIRFCPQCGGRNYLNHQQLAMQCHDCRTLHYPRIFPCIIVAVRKQ
QQILLAQHPRHRNGMYTVIAGFVEVGETLEQCVAREVLEETGIVVTNIRY
FGSQPWAFPSSMMMAFLADYDTGELKPDYSELSDANWFGIENLPPVAPRG
TIARALIEQTLADIAQDQA
>gid:29020  VC0334  hypothetical protein
MDYDVFNGDADGILSLVQWRLVHPKSTQLVTGVKRDIALLERLTVTAGDE
LVVLDISMAKNQLGLQRALQAGAHVFYADHHQPGDIPAHSALQAHIDTDA
NLCTALIIDRLLKGRFRDWAITAAFGDNLHRVAHTLAEEAGFDAAQTDAL
CELGTLINYNGYGRTVSELHFAPDTLYQTLLAYQTPWAVLADLNSPFYQL
RSAYQQDFAFALAQPAYYRSSSVTVVILPDCAAAQRVSGAFANHLANQDM
QRAHLIVTYADEQHYTLSLRAPLSDKRGAGALCAQFPSGGGRESAGGINQ
LPYALLDNVIAVVEAFYAS
>gid:29039  VC0345  DNA mismatch repair protein MutL
MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGG
AKLIRIRDNGSGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALA
SISSVSRLTLTSRTVAQEEAWSAYSEGRDMAVKLQPAAHPVGTTVEVLDL
FFNTPARRKFLRTEKTEFTHIDELLKRIALSRFDVSFTLRHNGKIVRQYR
AATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWITTPEGARQQS
DLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV
NVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHC
AEEVNPPVVPMIDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVRE
RAVSNPWVASPKTASTGKERYGSASVSKKEAAVYQTLMQTPDLSDEEPST
ASTIVSSIEAVKANIAIEKLGKAIQVVAGQYLLMSSPQGCVLISLYQAQQ
LKLRGLLNAQHGALKAQPLLVPLALKLNESEWQVAQRHSSALLQLGIELK
SRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALSHQALADWL
TQRIVVEKRDYTLAEAIGLIAELEQLWQGNLPLQDPHFITLVDFSASITA
LHS
>gid:29061  VC0367  primosomal replication protein N
MTNRIELSGVVAKALVRSQSPSGVKHCHFWLEHRSTMVEADLPRQVFCRL
PVVVSGARSEALTQNLVQGSSILVSGFLAYQTSRNGVGKLVLHADKISQI
>gid:29065  VC0371  replicative DNA helicase
MADPRTDNRNRKIPDAQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVSE
HVMTQDFYSRPHRLIFDGVKSILEAGKPLDLITLSEYLEQREQLEDVGGF
AYLADLAKNTPSAANINAYAEIVAERALVRNLIGVANEIADAGYDPQGRN
AEDLLDLAESKVFAIAEARTSENEGPKNVDSILERTLERIELLYKTPQDG
VTGVNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENAAMEQD
KPVLIFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGI
LMEKKNMYIDDSSGLTPTEVRSRARRIAREHGGLSLIMVDYLQLMRVPAL
TDNRTLEIAEISRSLKALAKELNVPVVALSQLNRSLEQRADKRPVNSDLR
ESGSIEQDADLIMFIYRDEVYHPDSPLKGTAEIIIGKQRNGPIGSVRLTF
QGHYSRFDNYAGPAFDDE
>gid:29094  VC0394  excinuclease ABC, subunit A
MDKIEVRGARTHNLKNINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQ
RRYVESLSAYARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGT
ITEVYDYLRLLYARVGEPRCPEHQVPLKAQTISQMVDKVLELPEGSKMML
LATIVKERKGEHVKTLENLAAQGFIRARIDGETCDLTDPPKLELHKKHTI
EVIVDRFKVRSDLQQRLAESFETALELSGGIVVVAPMEGDGEEQIFSANF
ACPHCGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQDANLS
LAQGAIRGWDQKNFYYFQMLTALAEHYDFDVHTPFNKLSKKIQEIILHGS
GRTEIEFKYINDRGDIRLKKHPFEGILHNLERRYRDTESNSVREELAKYI
SNKPCSSCDGTRLKIEARNVFINDTALPTIVELSIADALTFFQELKLEGQ
RAQIAEKVMKEINDRLQFLVNVGLNYLNLSRSAETLSGGEAQRIRLASQI
GAGLVGVMYVLDEPSIGLHQRDNERLLQTLTHLRNLGNTVLVVEHDEDAI
RMADHVIDIGPGAGVHGGMVVAEGNVEEIIANPNSLTGQYLSGVKKIAVP
EQRTPKDAKKTVELKGAVGNNLKNVDLSIPVGLFTCVTGVSGSGKSTLIN
DTFFKIAHTALNGATTATPAPYRSIQGLEHFDKVIDIDQSPIGRTPRSNP
ATYTGIFTPIRELFAGTQESRSRGYQPGRFSFNVRGGRCEACQGDGVIKV
EMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLDMTVEDAREFFD
PVPVIARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKLARELSKRDTGK
TLYILDEPTTGLHFHDIQQLLSVLHRLRDHGNTVVVIEHNLDVIKTADWI
IDLGPEGGQGGGLIIAEGTPEDVAQIEASHTARFLKPLLN
>gid:29097  VC0397  single-strand binding protein
MASRGVNKVILIGNLGQDPEVRYMPSGGAVANITIATSETWRDKATGEQK
EKTEWHRVTLYGKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYST
EVVVQGYNGIMQMLGGRAQQGGMPAQGGMNVPAQQGSWGQPQQPAKQHQP
MQQSAPQQYSQPQYNEPPMDFDDDIPF
>gid:29161  VC0452  A/G-specific adenine glycosylase
MTPFAQAILTWYDAYGRKNLPWQQNKNAYRVWLSEIMLQQTQVATVIPYF
ERFLERFPTVHALAAAPQDEVLHFWTGLGYYARARNLHKAAQMVVSEYGG
EFPTDLEQMNALPGVGRSTAAAVLSSVYKKPHAILDGNVKRTLARCFAVE
GWPGQKSVENQLWHYAEMHTPKVDVDKYNQAMMDMGAMICTRSKPKCSLC
PVESFCLAKQQGNPQEYPGKKPKTDKPVKATWFVMLYHDNAVWLEQRPQS
GIWGGLYCFPQSEIANIQTTIDQRAIGDSTITSQKTLIAFRHTFSHYHLD
ITPILLQLSRKPDIVMEGSKGLWYNLSHPDEIGLAAPVKQLLHTLPFDID
SHI
>gid:29175  VC0466  conserved hypothetical protein
MSRTVMAFDYGTKSIGSAIGQEITGTASPLKAFKANDGIPNWDEIEKQIK
EWQPNLLIVGLPTDLHGKDLDTITPRAKKFAQRLHGRFGLPVELHDERLS
TTEARAELFAMGGYKALSKGNVDCQSAVIILESWFESQWG
>gid:29179  VC0470  extracellular deoxyribonuclease
MMIFRFVTTLAASLPLLTFAAPISFSHAKNEAVKIYRDHPVSFYCGCEIR
WQGKKGIPDLESCGYQVRKNENRASRIEWEHVVPAWQFGHQLQCWQQGGR
KNCTRTSPEFNQMEADLHNLTPAIGEVNGDRSNFSFSQWNGVDGVTYGQC
EMQVNFKERTAMPPERARGAIARTYLYMSEQYGLRLSKAQSQLMQAWNNQ
YPVSEWECVRDQRIEKVQGNSNRFVREQCPN
>gid:29207  VC0498  ribonuclease HI, putative
MSYSIYVDGAAPNNQYGCTRGGIGLVVMDEDNEIVHEESITINRKTDNAE
LELLALIEALEYAEDGDVIYSDSDYCVKGFNIWMDDWKDRGWRRADKKPV
KNRQLWQQVDELSSRKYVEVFKVKAHSGIEGNERADLLAVEAAEAD
>gid:29216  VC0510  DNA repair protein RadC-related protein
MNPKTSEYQKQQRYQENEILEHAAEILANRYVRGDALTNPDATKEYVRCK
LGSYEREVFALLLLDNQNRLIEFKELFQGTVDAASVYPREVVKAVLEVNA
AAVIFAHNHPSGDSTPSQADRRITERLKDTLALVDVRVLDHIVTGDTCTS
FAERGWL
>gid:29222  VC0516  phage integrase
MAKRVVPLTNTQVKQAKESDKEYTLSDGDGLQLRVKTNGTKLWILKYTHP
ITKKRNNISFGCFPDVSLAEARKRRSEAKTLLALNIDPKQHKDEQLLKER
AELENTFGKYSDRWLTLKRESVKPETADKAYRALEKHILPKLGNVPIQDI
KPRTVLSILEPVKAQGTLETVKRLCRIINEVMRLAVASGDIEVNYLADIT
KLFPAPKRQHMVTIEPERLPELMQAIANANITLATRCLLEWQLHTMTRPI
ESATARWQDIDFKNKVWVIPAERMKMKRPHTIPLTEQTLALLEIMKPISS
HREYIFPSNKNPKSHVNSQSANMALKRMGYKGQLVSHGLRALASTTLNEQ
GFNPDIIEAALAHVDKNEVRKAYNRAEYLEQRRKLMSWWSSHITSASNCN
TSLAERKVLKLAG
>gid:29240  VC0535  DNA mismatch repair protein MutS
MMKSNASPSESLSHHTPMMQQYLRLKAENPDILLFYRMGDFYELFYDDAK
RASELLDISLTKRGASAGEPIPMAGVPFHAVEGYLAKLVQMGESVAICEQ
IGDPATSKGPVERKVVRIVTPGTVTDEALLSERVDNLIAAIYHHNGRFGY
ATMDITSGRFQLSEPQTEEEMAAELQRTSPRELLFPEDFSPVHLMASRQG
NRRRPIWEFELDTAKQQLNQQFGTRDLVGFGVEQAKLGLCAAGCLIQYVK
DTQRTALPHIRSLTWDRQDQSVILDAATRRNLELTHNLAGGTDNTLAEVL
DHCATPMGSRMLKRWIHQPMRDNATLNQRLDAITELKETALYGELHPVLK
QIGDIERILARLALRSARPRDLARLRHAMQQLPELHSVMSELKQPHLTEL
RTHAEPMDELCDLLERAIKENPPVVIRDGGVIADGYSAELDEWRDLANGA
TEFLERLEAEERDRHGIDTLKVGYNNVHGFYIQVSRGQSHLVPPHYVRRQ
TLKNAERYIIEELKQHEDKVLNSKSRALALEKQLWEELFDLLMPHLEQLQ
QLAASVAQLDVLQNLAERAENLEYCRPTLVQEAGIHIQGGRHPVVERVMN
EPFIANPIELNPQRRMLIITGPNMGGKSTYMRQTALIALMAHIGSYVPAE
SASIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATRNSLVLMD
EIGRGTSTYDGLSLAWASAEWLAKEIGAMTLFATHYFELTELPNVLPHLA
NVHLDAVEHGDGIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIKNARAKL
QQLELLSSQPAETRKPSRVDIANQLSLIPEPSAVEQALAGVDPDQLTPRQ
ALDMLYQLKKLL
>gid:29248  VC0543  recA protein
MSISQQIRFKTLTEPNFFLYRGGHCTNQQYNKPQHDKSASTRFRHNYLSP
ESDYPERVMDENKQKALAAALGQIEKQFGKGSIMRLGDNRAMDVETISTG
SLSLDIALGAGGLPMGRIVEIFGPESSGKTTLTLELIAAAQREGKTCAFI
DAEHALDPVYAKKLGVNIDELLVSQPDTGEQALEICDALARSGAVDVIVV
DSVAALTPKAEIEGEMGDSHMGLQARMLSQAMRKLTGNLKQSNCMCIFIN
QIRMKIGVMFGNPETTTGGNALKFYASVRLDIRRTGAIKEGEEVVGNETR
IKVVKNKIAAPFKEANTQIMYGQGFNREGELIDLGVKHKMVEKSGAWYSY
NGDKIGQGKANAYKYLKENPEIAKTLDKKLREMLLNPENMQLIAETSSAA
DDVEFGAVPEEF
>gid:29293  VC0580  conserved hypothetical protein
MVFVNSRHQGNHYEQMAADYLRRQGLTLVTQNVNYRFGELDLIMRDGNTL
VFVEVRYRNNTQHGHAAETVTRTKRARLIKAANCWMLANKMNSHSADFRF
DVIAIHQQGQHIDWLKNAITEG
>gid:29313  VC0601  ATP-dependent helicase HrpB
MSPLPIIEVMPKLLSGITNSPQLILKAAPGAGKSTYFPLQLLQAGGFHGK
IIMLEPRRLAARNIARYLAQQLGEEVGQRVGYRVRGENRVSRATQLEIVT
EGIMTRMLQNDPELDGVDVLIFDEFHERSIHADTALALALEVQSALREDL
KIVVMSATLDQQALQNLLPQASYVESQGRGFPIEIRYQPLRSDEPLVTAM
QRQIRHLLQHETGSLLAFLPGAASINQLTEQLSDLASEVEICPLYGQMEF
AAQQRAIAPTAAGRRKVVLATNIAETSLTIEGIRIVLDSGLERSARFDLK
TGITRLEQVRIAQSSAEQRAGRAGRLEPGICVRLYSEAQLKQQPWVPEPE
MLHTDLAPLALELAQWGAQPSDLAWLNLPPSSAFAQAQQLLQRLGLLDAR
TQITAAGKEAHLLGVEPRIAAMLLSADRLGESALQSALALTVLLEEPERQ
VIDVQHSLHRWQQGRHPKQKLLIQRAQSLAHKLDTAFSLSSVDSAWLPLV
ACLAFPDRIAQQRGQQTGQFLLANGHGAWLAVEDRLSAADYLVALDLMRG
QTQASQIFSALELDIHALERVLPALISRVEQVDWDEKAGRLSAEAQWRID
QLVLRREKLPEPDKQKMTQALLSYVRRKGLTVLQWSEDASEWLARARCAA
EWLPEEAWPALDDETLLARLELWLEPYLAGVTSVKGLQSVSVLQALKHYL
GWELSQQLDEWLPTHHLLPTGNHKKIRYQLGMEPTLSVRMQEVFGEQSSP
RVAKGTRAVVMELLSPAQRPLQVTRDLASFWAGAYKEVQKEMKGRYPKHV
WPDDPANHVATSKTKRQLNA
>gid:29369  VC0656  DNA polymerase III, psi subunit
MLSSSHYLSAMDIQQWELIHPERLAGFQPRTQTLDHDCRLLLVANQPPQG
AEILLLERILKSFQLELSMVRYIAPIQLSQLAYTGLEWIWFAGCDPLSHQ
AQKQLHSPRLSDIDGNTQYRRALWQQICAHQGIAS
>gid:29373  VC0660  ATP-dependent RNA helicase SrmB
MIKTFADLELDPILLEAIEEMGFSRPTQVQAEAIPQALDGRDVLASAPTG
TGKTAAFVIPALQYLLDFPRRKAGPARILILTPTRELAMQVAEQAQALAK
NTRLNIFTITGGVQYQEHADILATTQDIVVATPGRLLEYIDAERFDCRAI
EWLILDEADRMLDMGFGPTVDRLSTECRWRKQTLLFSATLEGRGVEGFTA
DLLKDPAHVDAEPPRRERKKISQWYHRADDMPHKVELLKKILTEQAERSI
VFLKTRERLADLRAELEKAQIPCAWIQGEMPQDRRNNAISRFREGDVNIL
LATDVAARGIDVPDISHVINFDLPRSADVYLHRIGRTGRAGKKGIAISLV
EAHDQPMMARVERYIKEEVKERFIDGLRPKHKKPVFKKKKKDIKKTADKG
AVKKKTTSKPKAKATKKKAATKA
>gid:29380  VC0668  DNA mismatch repair protein MutH
MKPAPTTQQELLTRAQQIAGLSFAELADEAGMTVPPDLRKDKGWVGQLLE
WHLGATAGSRPQQDFEHLGIELKSIPISYTGKPLETTFVCVAPLTGVHGL
TWEQSHVRNKLSKVLWIPVQGEREIPLAERCVGSPLLWSPSPEEEAQLKA
DWEELMEWIVLGKVAQITAKHGEVLQLRPKAANGRALTEAYGANGRPIKA
LPRGFYLRTQFTAQILQRYYA
>gid:29383  VC0671  MutT/nudix family protein
MLRLGICGKINAIKEFTRGLPVIDGDGYRLNVGIVICNNHGQVFWAKRYG
QHSWQFPQGGIDDGESPEQAMFRELYEEVGLTKKDVKVIATSRHWLRYKL
PKRLVRWDSQPVCIGQKQKWFLLRLECDESKINMQRGSSPEFDGWRWVSY
WYPVRQVVSFKRDVYRRAMKEFASLAMPFKERKVKGKRNTHRG
>gid:29435  VC0718  conserved hypothetical protein
MWFKNCMVYRVNREVNFNADQLEKQLAEFRFTPCGSQDKQKFGWVSALGK
HGDMMTHVSENRILVCAKREEKMLPASVIKDSLNAKVEEMEAEEGRPLKK
KEKDALKEDIVIDLLPRAFSKSQLTFVLIMPTEGLILVDAGSYKKAEDVL
SLLRKTMGSLPVVPAIPEIAVETTLTQWVKDGNLPQGFSLMEEAELKSLL
DDGATIRCKKQELSSDEILSHIQANKVVTKLAINWQDRIRFVLAEDCSIK
RLAYSDELKEQNDDIPHEDRAARLDADFSLLCGEMSVFLPDLFNALGGLP
HPEA
>gid:29483  VC0766  exodeoxyribonuclease VII, large subunit
MSSSLANRNIYTVSRLNSEVRLLLENEMGIVWLVGEISNFSAPVSGHWYL
TLKDSQAQVKCAMFKGNNRLVNFKPQNGQQVLVKARLSLYEPRGDYQIIL
ESMQPEGDGRLQQQFEQLKMQLAAEGLFAQTRKKPLPENPRCVGIITSRT
GAALHDILHVLKRRDPNLPVVIYPTLVQGEEAAIQIAQAIGRANTRAECD
VLIVGRGGGSLEDLWCFNHEIVARTIAASEIPIISAVGHEIDVTIADFVA
DVRAPTPSAAAELVSRDHRHKQQALHQWQAKLASTMRHYLAQQETQFARL
QHKLDKQHPQARLERQQQQLDELSLRLEQKMQQRLATQQQRWDRLSHKIE
LHSPIHLIRQQRFNLIQQEQRINQSIQRYLIQSRHQLALLSEKLDAVSPL
ATLARGYSVTRTTQGELVRQSAQVKPGDTLVTQLMDGEILSTVNSR
>gid:29528  VC0812  helicase-related protein
MMSDRQSFLYSGHKLSSGGANDPLLPRLVQAINHATEIEISVSFIQPSGL
DLLFDPLFDAVQSGAQVKLLTSDYLSITHPVALRRLMLLTERGAQCRVFE
CGQHSFHMKSYIFVRCEQGEILEGCAWIGSNNISKTALLDSHEWALRHDF
EPPETSAAALEFLHIRQQFASIFNHTNSKDLTHTWIDHYLERYQQAKKQH
GMPILADSQDEQSEPPAPNAVQVEALTALNATRAQGFSRGLVVLATGMGK
TWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVTQ
NTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSYRNLLTY
FKPKFLLGLTATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPFDYH
GIYDQAVNYQEIPWRNGKFDPDSLDNALATQRRAEHVYQHWHQKKQTRTL
AFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDSGKIDILF
SVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVV
IDFIGNHDSFLNRPTTLYNVSHLKDALAKHQQQALPDGCHVTFDITLLNF
WQQLTRKMRFSVQDEYQQLAHQLAHRPTASEFFYHGIEISKVRKQAQSWF
HLVASQENDPELAEIVTRYGDFLLHGIESTGMSKSFKAILLEALLELDGL
RTPPTLATLAECSYTVIARRPDLMAEDLTENAKQFKAADKDWLNYWRNNP
IKAFTNKATKQATWFSIDSQQRFVANFDIREQDLERLHDCIQELVDLRLA
EYAQRPKQHKENLIKAKSKAAVISLIPEQKTIGTPIPFYPELKIACGHFK
RGSEREVQTYFVPDGYGLLDPTRHFVSPASGNSMNGGKNPIQDGDLLLLE
WVTPSSAGSISNLTMAIETQDETGDNQYLLRVVRKIAPNQYELQAQNPSY
PNMPATDAMKTFARLKAVIKNNSQQSQTR
>gid:29533  VC0817  transposase, putative
MSMDREIQQRLQWVKMYEECGDAGLVCRRCGISRPTLRKWAKRYKQCGIA
GLESQSRRPHSSPDTKLTDELRALILTMRDKRNLGARRLQTELIRLHKIH
LSTATLHKVLSEASVKPIVTYRRKKDFQRYERPIPGDRVQMDTCKIAPGI
YQYTAIDDCSRYRVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGR
EFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVS
VGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLSEEVSQ
NYQIKKERFQEQNYKLDLQLRKLKPSL
>gid:29561  VC0847  integrase, phage family
MAKNTVKLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRP
TNGKRANLSFGMYPDISLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHK
EIHEHTFENVTKDWFAIKQNDVTPDYALDIWRSLELHIFPHISDKPVKAI
TAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFATNCGLIQANPLTGIK
AAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLEWQLHTMTRPA
EASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISG
HRDFIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQ
GFDPDLVESALAHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGS
LSVTGTKQLKNKLPPPPTWKQM
>gid:29566  VC0852  DNA repair protein RecN
MLAHLSINNFAIVKSLQLELSKGMTTITGETGAGKSIAIDALGLCLGGRA
EASMVRQGEDKTEVSAAFHLDNNLLASRWLEDNELLEGKECILRRIITKD
GRSKAFINGSPVPLSQLKTLGQLLINVHGQHAHQQLMKPEYQLSMLDQYA
GHADLLKATRHAYQNWRQASNQLKQLRENSQQNQAQLQLLEYQIKELNEL
ALGEDEFVELEQEQKRLANSGDLALNCQRAIELLNEGEEVNALGLLQSVS
HTLIDLAEMDSKLTALPSMVAEALIQLEETYHELRNYLDSIDVDPERMAY
VEERYSKVMSLARKHHVLPEELYQHHQALLQQIAQLDCSDEKMSALASEV
DVLYQTFVAAADKLHKSRVRYAKELDKLISQSMHELSMEKAQFKIEVQQD
SAHSSPLGFDAVTFLVSTNPGQPLQPIAKVASGGELSRMSLAIQVITAQK
VDTPSLIFDEVDVGISGPTAAVVGKLLRKLGESTQVLCVTHLPQVAGCGH
HQLFVAKQTKAGKTETQMLKLDQEQRIAELARLLGGSQITESTLANAKEL
LIAA
>gid:29584  VC0870  IS1004 transposase
MGDYRSSSHVYWRCKYHIVWTPKFRFKILKGNVAKELNRSIYILCNMKDC
EVLELNVQPDHVHLVAIIPPKVSISTLMGVLKGRSAIRLFNKFPHIRKKL
WGNHFWARGYFVDTVGVNEEIIRRYVRHQDKKELEQEQQLELLRD
>gid:29605  VC0891  exodeoxyribonuclease, small subunit
MASKKPENMSFESTIEELEQLVEQLESGDLALDEALRKFERGISLARAGQ
LKLDDAEQRVRILLSNSDDAPLSDFSDVAE
>gid:29612  VC0898  exodeoxyribonuclease IX
MGSNLDGFDYNKGLTSPYFLWFLVMSLHLVIIDALNLIRRVHSAQPDPND
ITRTAETTTRTLQRIINEAQPSHMIAVFDHHLSDRGWRAELLPTYKANRK
PMPDVLQQGIDAIQDAWWQLGIDSLLSEGDEADDLVATLACKVAAHQEKV
TIISTDKGYCQLLSPTLQIRDYFQQRWLDEPFIAQEFGVTPAQLTDYWGL
TGVSSSQIPGVAGIGPKAAKEILNQFSSIEEAYASPELPAKYRKKLDPHI
EMARICKQVSALKTDIELGFNLQDIRFNSSSAD
>gid:29671  VC0953  DNA polymerase III, delta subunit
MRIYAEKLAESLHKTLYPIYLVFGNEPLLLQEAKTAIEKTAQAQGFLEKH
RFSADAGLDWNAVYDCCQALSLFSSRQLIEIEIPESGVNAQTAKELSALV
GQLHQDILLLVIGPKLTKAQENAAWFKTLAQQACWVNCLTPELSRLPQFV
QQRCFALGLKPDAEAVQMLAQWHEGNLFALAQSLEKLALLYPDGLLTLVR
LEESLSRHNHFTPYHWMDALLEGKANRAQRILRQLMLEESEPIILIRTAQ
KELTQLLKWQQERQQLGNLGSLFDRYRVWQNRRPLYSAALQRLPSRALLR
LVGILTQAELLAKTQYEQPVWPILQQLSLECCNPQANLPLPH
>gid:29689  VC0971  DNA ligase
MSDVAQRLTELRKTLHEHGVRYYVEDAPSIPDAEYDRLMRELLELEAAHP
ELMSSDSPSLRVGGRPLDAFESVVHEIPMLSLDNAFDDGELESFYRRMTD
RIPAVQHSAFCCEPKLDGLAVSLLYENGVLTRAATRGDGTTGENITENVR
TIKSIPLRLQGADFPTRLEVRGEVFMPKAGFEALNARALKKGEKQFVNPR
NAAAGSLRQLDSKITAQRPLAFYAYSVGVIEGGELATSHYQRFLQLKGWG
LPICPETKLVTSLAEVKAFYQDILQRRQSLAYEIDGVVIKVDDIQLQERL
GFVARAPRWAIAYKFPAQEELTLLNDVEFQVGRTGAITPVAKLEPVFVGG
VTVSNATLHNADEIERLGVMVGDTVVIRRAGDVIPQIVSVVLERRPENAK
SIVFPTRCPVCQSDVERVEGEAVARCSGGLICQAQRKEALKHFVSRKAMD
VEGLGDKVIEQLVDREMVSTPADLFRLRAGELTILERMGPKSAQNVIDAL
NKAKQTTLPKFLYALGIREVGEATALNLAQHFLSLEAIQQASLEQFIEVP
DVGVVVASHLQAFFAQDRNQQVINELLEQGITWPALTAAPVAVDSALAGK
IVVLTGSFTQLSRNDAKAALQALGAKVTGSVSKNTDMVFAGEAAGSKLAK
ATELGIQVFDEQALIEFLK
>gid:29723  VC1006  ribonuclease T
MLYRRICNNASLITQFRTRMTDKNDALTLKKRFRGYFPVVIDVETAGFNA
QTDALLEICAVTLSMDENGDLHPASTIHFHVEPFEGANLEKAALEFTGIY
DPFSPLRGAVSEDHALKEIYKLVRKEQKAADCSRAIIVAHNAHFDHSFVM
AASERCKLKRVPFHPFATFDTATLSGLAFGQTVLAKACKTAGMEFDNREA
HSALYDTQKTAELFCTIVNQWKALGGWPLVNDDEDNNNDADLD
>gid:29728  VC1011  endonuclease III
MNNAKRIEILERLRAHNPKPETELNWNSPFELLIAVLLSAQATDVSVNKA
TDKLYAVANTPQTMLDLGVDGVKEYIKTIGLFNSKAENVIKTCRILLEKH
QGEVPEDREALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVSNRTKF
AVGKNVDEVEHKLLKVVPNEFKLDVHHWLILHGRYTCVARKPRCGSCIIE
DLCEFKDKVYPES
>gid:29770  VC1054  DNA polymerase III, subunits gamma and tau
MSYLALARKWRPTRFSEVVGQSHVLTALENALAQNRLHHAYLFSGTRGVG
KTTIGRLFAKGLNCETGITATPCGQCATCQEIDQGRFVDLLEIDAASRTK
VEDTRELLDNVQYKPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEYV
KFLLATTDPQKLPVTILSRCLQFHLKPISVENIQQQLDKVLHAEQISSDS
KALNLLAHAADGSMRDALSLTDQAIALGNGVVKSDIVAHMLGTLDTDHSL
HLLQAISLQTPQAVMDCIETLAQNGVEWDGLLQQLSTQLHRIAMYQALPA
TLDKSLPEASRIESLAKTLAPQDVQLYYQIALKGRQDLPLSPTARIGIEM
LMLRMMAFRPSHVSLASVIVPPNTAVTAPTIAAPTSQMAAAAPQPQPVAQ
SNVSQSASQAMPHPVAPPMMAAQPVVESAVPVTQREASHSINAPEASVVT
NTDTQSQASMPALAGLRHQLRSKRQEVQNKGADGKKSDATSATPASALER
IAQRAQQVQVSPERNDEDELEPEEEIYQWRPMQPIEVAVKSEVTPTQLKK
ALEHEKTPEMGAKLIEEAVAQDAWSALVQRLETAKMVEQLALNSAFVRQG
DQISLTLRPSHAHLHNEKAQQELEQALNHVLGEACSLNITVGQEGETPLE
LRERLYQQKLTSALHSLQTDPNVQFIERRFNAQLDSDSVRPI
>gid:29772  VC1056  recombination protein RecR
MRTSHMLEHLMEALRCLPGVGPKSAQRMAFHLLQRDRKGGLQLAEALSQA
MVEIGHCQECRTFTEQDVCHICSNPKRKENGQLCVVESPADIAALEATGQ
FSGRYFVLMGHLSPLDGIGPSDIGLDTLDYRLQRGDISEVILATNPTVEG
EATAQYIAELCREHQVTASRIAHGVPVGGELELVDGTTLSHSLLGRHKLF
>gid:29781  VC1065  methylated-DNA--protein-cysteine methyltransferase-related protein
MDQFLQQIFVVIHQIPVGRVSTYGAIAKMAGYPGYARHVGKALGHLPEGS
QLPWFRVINSQGKISLQGEDFVRQRQLLLAEGIEVSDTGKISLRKYQWQL
>gid:29824  VC1108  conserved hypothetical protein
MSNYSLDFSGDEDFRPLAARMRPQTVEQYIGQQHILGPGKPLRRALEAGH
IHSMILWGPPGTGKTTLAEVAANYANAEVERVSAVTSGVKEIRAAIEKAR
ENKLSGRRTILFVDEVHRFNKSQQDAFLPHIEDGTVTFIGATTENPSFEL
NNALLSRARVYKLTSLNQQEILQALHQAIADTERGLGKVAAVFADNVLDR
LAELVNGDARMSLNYLELLYDMAREDDQGRKQIDLPLLAEVAGEKVSRFD
NKGDIWYDLISAVHKSIRGSDPDAALYWAARMISAGCDPLYIARRLLAIA
SEDVGNADPRGMQVALAAWDCFTRVGPAEGERAIAQAIVYLACAPKSNAV
YTAWKQALSDAHNLPEFEVPPHLRNAPTRLMKDLGYGEEYRYAHDEPGAY
AAGECYFPPEMSGTRYYQPTPRGLETKIAEKLAYLADLNAKSPQKRYEK
>gid:29928  VC1212  DNA polymerase II
MKIEQGFVLTRHARDVAGQTQIELWLATPSGPTQLTIRGERPVFFIEQSA
SQEVMRIAAELSITPSLAPLSLRSFAGQPLAACYCNTIRDSQILAEKLAQ
ADMLILEADIRLADRFLMERFIQGSIEFTGQITDFGHYRQVQQAKCRQGD
YLPTLNMVSLDIECSEKGLLYSIGLDSPMDSRVIMIGQPEPAETPIQWVE
DEYQLLKALIAWFEQFDPDVIIGWSVVDFDFRLLHKRAEFHKLKLTIGRA
QQPSFFRTASQTQQGFISIPGRVVLDGIDTLKTATYHFRSWSLESVSQEL
LGEGKAIHNVHDRMDEINQMFRHDKPSLARYNLQDCVLVNKIFAATHLLD
FAIQRSRLTGVELDRIGGSVAAFTNLYLPQLHRAGYVAPNLQPENWVASP
GGYVMDSIPGLYDSVLVLDFKSLYPSIIRSFLIDPLGLIEGLKLPIGKQA
DHAVPGFRGGQFHRTKHFLPEMIEKLWAARDEAKRNQEKAFSQAIKIIMN
SFYGVLGSSGCRFFDARLASSITMRGHEIMIQTKRLIEARGYQVIYGDTD
STFVALGGQYSQQEADNIGHALVREINQWWTEHLKQEYALTSILELEYET
HYRRFLMPTIRGSETGSKKRYAGLKGDGDNEQLIFKGLESARTDWTPLAQ
RFQHQLYQLIFHGQDPESYIRTIVEQTLAGQLDDQLVYQKRLRRRLHEYQ
KNVPPQVRAARMADDINAKLGRPLQYQYRGTIEYVITVNGPEPKEYSKSP
IDYQHYIDKQLKPVADAILPFIGKQFDELIAPQLGLF
>gid:29930  VC1214  excinuclease ABC, subunit C
MSTQFDSAPFLKTVTNQPGVYRMYNAEAEVIYVGKAKDLKKRLTSYFRKN
LDSEKTKALVSNIAKIDVTVTHTETEALILEHNYIKQYLPKYNVLLRDDK
SYPYIFLSAHKHPRLSSHRGAKKRRGEYFGPYPDSGAVRETLHLIQKIFP
VRQCEDTVYSNRTRPCLMYQIGRCAGPCVKGLISDQGYQEIVHYLRLFLQ
GKDNQVLSILVEKMEQASRELRFEDAAKARDQIQAIRRVQEQQFVSDDSL
EDLDVLGFAQENGIACIHILMIRQGKVLGSRSHFPKIPSDTSQVEVFESF
LSQYYLSHSEARSIPARIILNRGLTEETEALQIAISELAGRKVTFHVNPT
GTRGRYLKLANTNALTAITTKMNHKMTISQRFKALQEELGMDAITRMECF
DISHTMGESTMASCVVFNQEGPLKQEYRRYNITGITGGDDYAAMAQVLER
RYSKQLDSSKIPDIIFIDGGKGQLNRAYEIISSCWQDWPKYPKIIGIAKG
VTRKPGLETLITIDGDEFHLPSDAPALHLIQHIRDESHNHAIAGHRAQRG
KTRRTSTLEGIEGVGPKRRQALLKYLGGMQELKRASVEEIAKVPGISHAL
AENIYQALKQ
>gid:29942  VC1222  integration host factor, alpha subunit
MALTKAELAEALFEQLGMSKRDAKDTVEVFFEEIRKALESGEQVKLSGFG
NFDLRDKNERPGRNPKTGEDIPITARRVVTFRPGQKLKARVENIKVEK
>gid:29954  VC1234  exodeoxyribonuclease I
MQQEHQPTFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQ
LPNDYLPAPEAALITGITPQKANSQGLAEPEFIARIHAELSTPNTINLGY
NSIRFDDEVTRYTCYRNFIDPYAWSWQHGNSRWDLLDVLRACHALRPEGI
EWPENDDGFTSFKLEHLSVANGIEHSNAHDAMADVIATIELAKKVKAAQP
KLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHYTSWIVPIAWH
PTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELPVPVKLV
HLNKCPILAPAKTLTAENAQKIGIDREQCLAHLNVIRQHPEIREKLVTVF
SQEREFNQESDVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIRVADK
RIEPLLFRYRARHYPHTLTDTEQRRWAAHCRDYFERNLEGYMLNLENLVH
EHQADPKKMAILKSVYHYVEKLAC
>gid:29967  VC1247  hypothetical protein
MKVLPLRHYLLRENKMSKLTADIEANLALFIQETQESQLVWGLRNEEGWL
SCESTEFEESEVMPFWSSKEDAQIHNVEEWADFEVVEIPLDVFVEDWLIT
LDEDGVLVGTNWNANLEGKELEPSQLAKLYL
>gid:29978  VC1258  DNA gyrase, subunit A
MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLF
AMNVLGNDWNKAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRY
MLVDGQGNFGSIDGDSAAAMRYTEVRMSKIAHELLADLDKETVDYVPNYD
GTEQIPAVLPTKIPNLLINGASGIAVGMATNIPPHNLGEVIDGCLAYIDN
EAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKVYMRSKAEIET
DKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEML
KCFVDHRREVVTRRTIFELRKARERAHILEGLALALANIDEIIELIRRAA
TPAEAKEGLIARGWDLGNVAAMLERAGTDAARPEWLEPQYGIRDGKYFLT
EQQAQAILDLRLHKLTGLEHEKILDEYKQLLEEIAALMHILASTERLMEV
IREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVVTLSHEGYVKY
QLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYR
MKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATG
DGTVKKTSLDQFANVRANGLIALNLRDEDSLIGVDITDGESEIMLFSKFG
KVVRFKESEETAVVDENGQPVLDENGQPEIKFKGVRPMGRTAAGVRGMKL
ADGDQVVSLIVPKTEGDVLTVTENGYGKRTSLSEYPTKGRGTQGVVSIKV
SERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVGRNTQGVTLIR
TSEGESVVGLQRIDEIEESELPEGEEALVENDAPVAQDDDGEQE
>gid:30010  VC1290  DNA polymerase III, epsilon subunit, putative
MSAMFDSAIYWPARFAHLAQQARQTHLQRFYAQPLVEGSTPIHQCSLVAL
DFETTGLNAEQDAIVSIGLVPFTTQRIFLSQARYWLVKPSQPLEDESIVF
HGITHSELQHAQAPEQVLKELLEALHGKIVVVHFRHIERDFLRQISLNIW
GEAIEFPVLDTLEIERQLLDKQRSLWQRIARRPLPSIRLGQSRMRYHLPP
YSPHHALTDAIATAELFQAQCAHHLPPHTAIQSLWL
>gid:30022  VC1302  MutT/nudix family protein
MQNISRHEFIQQFQLHLPAAYPQESLRRVAHLAPEKLRKASVLIGVVERP
QGLQVIMTKRAAHLRHHPGQISFPGGKYEESDHSLQQTAKREAREEIGIP
EEKIRIVGQLPELVTVSQFAVTPFLAFVESDYPIQLDHNEVDEVFEVPIS
FLLDRKKIYSGTFQLKKHRHKLFALSYKQHFIWGMTAQIIQSLQKQFINY
NELV
>gid:30061  VC1342  MutT/nudix family protein
MGLSFSALSSQEEEAAYRGALCLIRGDHKLVMTQEVLTGKLSLPGGTIEA
GETPQMAAQRETWQETGMVVSVGRLIGQTSTAVVYECVSESQVIAYSYQN
GFGGYELPIWFAPDYGVETVSAMLVNPSFIKAEQYRYPEQWSFIADLFKL
SQEQAVDYVAELHKAAPQFQQVELEWLGQLQHGVAQLKKSMPWLQNLILS
GMIFNLPVVALVLFPLLYWQLGKPYCYKILFAMSVTSLLCLVAQQGFALP
RPHVYQPALELFPSYGFAFPNLPIALWSCLGVLVWHVQQEFTQRWVMRVW
VGLFAWLSFASFYSGSAFLSDLATGALVGALVAWHIIRLDLKPGVNVESL
LCSKSVWWGLTVACVILAIIWPQPIFTQWLALLVTISGLVTLLTPSSSTL
SLRGVLLMIALLLLADQGISLLIEPFNHSSFYMLVGETLRYPVLILLFVL
LARRGLKAPIVSSTY
>gid:30096  VC1377  conserved hypothetical protein
MNYNRVVCFDLEMCCWNENGVGTTGEIIEIGLAEIDLAAGEIVKRAQYFV
KPEKDEISLFCAELTGITPRKIEKQGRPLAEVIQSMVKNFGGSNKIYASW
GRDDLILLNECREKGLSVPFQEFLNLATLYRIQHRLKDKRIGHRAAQESQ
GIEWEGRQHSGYVDAYNLAKLALTML
>gid:30101  VC1382  ATP-dependent helicase HrpA
MTSSQPTPDSAAQPKANSAASLKKALGECLIKDRFRFSKRIDGASKIKNE
SARNAVFDEIALDIAQSMMVVEQRKQQMPKIEYPALLPVSQKRDDIAQAI
AHHQVVIVAGETGSGKTTQLPKICAELGRGKYGLIGHTQPRRLAARSVAN
RIAEEMETELGGFVGYKVRFTDQISDQTQIKLMTDGILLAEIQNDRFLNQ
YDTIIIDEAHERSLNIDFILGYLKQLLPRRPDLKVIITSATIDPERFSKH
FSNAPIIEVSGRTYPVEVRYRPLAGDDDSESDRDQLEGIFQAVDELCDEG
LGDILIFMNGEREIRDTADALSKRNLRDTEIVPLYARLSAGEQNKIFQPH
AGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPIS
QASANQRKGRCGRTEEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQ
MTALGLGDIEAFPFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTES
GKQLARLPIDPRLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQ
SADDKHRRFNHEDSDFLTLVNLWHYIGQQQKALTSNQFRRQCKLDYLNYL
RVREWQDVYTQLHQSTREMGFKLNDEPGSYHAVHSAILVGLLSHIGMKDQ
EKNEYHGARNARFNIFPASGLFKKQPKWVMSAELVETSKLWARVVAKIEP
DWIEPLAKHLSKRSYSEPHWSKKNAAVMAYEKVMLYGIPIVPKRLVNYGT
IDPVLSREIFIRSALVEGDWETKHAFFKQNRALLAEVEELEHKSRRRDIL
VDDEELFQFYDQRVGTEVVSGRHFDAWWKTASRKTPDLLSFEKEMLFKGD
ASHITDLDYPNFWHQGNLKLKLSYQFEPGENSDGVTVHIPLPILNQVEPH
GFDWQIPGLRHELVVSLIKSLPKTLRKNFVPAPNYADAFLARVTPFEMPL
LDAMEKELRRMTGVTVLREDWKLDQLPAHLKITYRAVDHRNRKLNESCDL
HELKESLKEKVQETLSQVADDDIEQRDLHTWSFGELPKVYQQKRGGFEVR
AYPALVDKKDSVEIKLFETEQEQLSAMRAGQRRLILLNVPSPIKYLHANL
PNKSKLGLYFNPYGKVLDLIDDCIACGVDKLIEERGGMVWEPQAFEALKE
HVRAELGDTVVEIAKQVETILTTAYNINKRLKGKVDFTMAFALSDVKAQI
EGLIFSGFATECGWKRLPDILRYMRAIERRMEKLPVDPNKDRLHMLKIES
VANKYKELLNKIPKGMAIPDNVREIRWMLEELRVSYFAQQLGTPYPVSDK
RIINAIEAC
>gid:30103  VC1384  hypothetical protein
MKKTLLALALLGASSTAMADSWIYGGASVGQSDYEGKHGTAYSVHAGTGI
LPFIGLEAGYVNHGDFEINATQELSASSLYFAVKPSMDFGPLHVYAKGGL
HSWDKDINGGKIDDGIDVMYGIGAEYFIIGPFSVGASYMNYTMDSTDVGT
LSFNATFHFL
>gid:30111  VC1392  deoxyribodipyrimidine photolyase, putative
MEKINLVWLKRDLRLTDHAPLQAALTSGRPTLLLYLFEPMLLGDAHYSER
HWRFVWQSLQAINRDLAQSKGEVLIVTSDWQTCFARIAERYAIEAIYSHQ
EVGLACTFQRDLALAQWCQQHDIVWHEFPYAAVIRGAQTRKNWDEHWQQV
MRSPCCDPDLTRANWLKLDAATLGLRSDIPATWQSKQAGMQTGGSDMAWA
TLEDFFARRGREYYRSISSPSLARHACSRMSPYLAWGNISLREMYQTLLK
HWSVAGFRRSLIALSSRLHWHCHFIQKFESECEMEFRCVNRAYDSLLQQS
SDAPAAQLAAWQTGHTGIPLVDACMRCLIQTGYLNFRMRAMLVSVLTHHM
NVDWRAGVTYLAQLFLDFEPGIHYPQFQMQAGVTGTNTIRIYNPTKQAQE
HDSEGQFIHKWVPELAQVPVPLLFEPWLMTPLEAQMYQVPLESPYLKPVM
DLEASAKQARDRLWQWQKLPAVQAEAMRILARHVRQAKPRTSPRQPNKRQ
PEMD
>gid:30125  VC1407  ATP-dependent RNA helicase RhlE
MSFSQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTG
KTASFVLPILEKLRQGQTQRKKRVRALILVPTRELAMQVAEKVEQYGKDT
GLKSLAVFGGVDEQAQKQRLIDGVDVLVATPGRLMDLYGQRAVYFEEIEM
VVLDEADRMLDMGFIESINKIIDCLPSEVQFLLFSATLSRKVRELAKTAV
RDPHEISIAANQASKSNISQWLITVDKDTKSALLSHLINEQQWDQALIFI
ETKHGAAKLVSQLEKRGIHAEAFHSGRSQAIRAQLLEDFKSGKIKYLVAT
GVAARGIDIDQLSRVVNYDLPFPADEYVHRIGRTGRAEAVGEAISFVSKD
NFKNLCMIESRLGHLIERRVVEGFEPKKPVPISILNYVPKHKRAVQD
>gid:30172  VC1454  RstA1 protein
MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLSSLIWAP
LPKPDYRMARTPEQKEKLIELYKQKWNVAMMERLEVFCLHVLGLRMSPWR
DKGLYGYENSCHLMSKYSNKHVGFVALGGNRNTCYFQIEGVGCRTVLEHT
SLFRLHWWLDLLGCSRLSRIDLAVDDFHGLFGREYAKKAYSDDAFRTARA
GRAPNGGERLVSEPNGKIINESFEVGSRESRIYWRIYNKAAQLGLDMHWF
RNEVELKDMPIDVLLNIEGYFAGLCAYSASIINSLPVKVVTKKRQVALDI
HSRIKWARRQVGKTLFDISKHFGGDLERVFGALISKEIHDDSLNLPDSYM
KLIDEIMGD
>gid:30181  VC1463  RstA2 protein
MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLSSLIWAP
LPKPDYRMARTPEQKEKLIELYKQKWNVAMMERLEVFCLHVLGLRMSPWR
DKGLYGYENSCHLMSKYSNKHVGFVALGGNRNTCYFQIEGVGCRTVLEHT
SLFRLHWWLDLLGCSRLSRIDLAVDDFHGLFGREYAKKAYSDDAFRTARA
GRAPNGGERLVSEPNGKIINESFEVGSRESRIYWRIYNKAAQLGLDMHWF
RNEVELKDMPIDVLLNIEGYFAGLCAYSASIINSLPVKVVTKKRQVALDI
HSRIKWARRQVGKTLFDISKHFGGDLERVFGALISKEIHDDSLNLPDSYM
KLIDEIMGD
>gid:30193  VC1477  transposase OrfAB, subunit A
MISSPHKLTGDIMTKRTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAM
NVGKSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNE
ILKKATALLMSDSLNNS
>gid:30194  VC1478  transposase OrfAB, subunit B
MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEA
HAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRK
ASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFAR
KVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQ
LLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEI
TRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
>gid:30253  VC1538  hypothetical protein
MPSVKMAIHVLVLNKIQTNWRTAAVKRRKNVVVETDGYLALIEHLSFNMD
VFTQEGDTGTESVEDVITDMVASNIMSIFEQNPELHSSVRFQLLKEADSV
VEDLGEVLAGVWYRPATNEQIAFLDEYIALVKNLFDSAVAKYD
>gid:30257  VC1542  DNA ligase
MLIRLTLTAAAIMLAQQTLANDGPLAFIPITYANNYQHGIDIFDYWKSEK
LDGIRAIWTGKQLVTRNGNPIAAPAWFTESLPSYSLEGELWAGRGNFSLV
QQTVLDSQPADSAWRKISLMLFDMPDAAGDYSKRYYNLIHLVNSLDLKHI
RYVEHTPIKSEAELLSYLDNISEKSGEGVMLRKISARYQAGRSNDLLKLK
RHQDAEATVIGYRLGMGKYKGKMGSMLVRTAEGLEFYIGSGFSDVERAEP
PKIGSVITYRYNGLTTEGKPRFARFVRVRENY
>gid:30317  VC1600  hypothetical protein
MVEIFIVVILLVLFFFVIQKYVIRHDDTKDYAYKKKGPLLDMKESAFFNA
LVSAVGDHGVVLAKVNMTNVITPSKVANKKHWFIAYNKISKSYFDFVVCD
ARTLEPRVVLELDDGKELQKGKVEREKLLLHVCKSANIPLIGTNIRMSYQ
VGKLRRLLAAHIDLIQTEQEVRFCKRCGSPMVIKVATQGEYRGRRFFTCS
RQPHCSYTENYNVVYEFEEEDNASNPSVN
>gid:30350  VC1636  helicase-related protein
MASLRVVPSASHRNLSKRMLTSSAGSRLLYRPHTIITQRNCLRPTSNDAK
AVNCPDNLGNSQRMYTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKS
LVIAELARLARGRVLVLAHVKELVEQNHAKYEGYGLTGAIFSAGLGRKET
DQQVVFASVQSVVRNLSEFQNQFSLLVIDECHRVPDDKNSSYQKVITHLL
ELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDCIFELPIH
YLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRAT
PQIVAQIIELAKARQGVMIFAATVRHAEEIYRLLPTEHAALVIGDTPTPE
RDRIIQAFKQQQIKFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIV
GRGLRLAAGKSDCLVLDYAGNQYDLYQPEVGDPKPDSDSEIITIPCPACG
FNNNFWGKLDANGFLIEHYGRRCQGYFTDDETGEREHCGYRFRAKYCNEC
GADNDIAARICHECDTTLVDPDKKLKEALNLKDALVFECTDMSLKVHKDA
KGKSQLQVTYHGQDAVQVHQFWPLNTPRQKQQFHDQFVRPHLADKHRPFE
AATPAKVVDHQHRFRPPLFVIARKSGRFWTIRDKVFADEFASPTDAHLSN
RAYTIPT
>gid:30356  VC1642  hypothetical protein
MPTTDQAIAITLPSLIHRIGSDTVKRLKLQAQTFDCELKRIRRSRNWQLL
GEAASMQKFVIQIKQTEYQVAEYLIRRVEAGLRLPSDKIEPIEVQLQRLV
QQNPSITLAELMAATHCSLMQARAARFAEESFE
>gid:30385  VC1672  DNA-3-methyladenine glycosidase I
MMNAEQGVCAWAMNHPLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLS
WLTVLKKREGYRQAFLGYDLQRLAQCDESHVEQIIAEYDVVKHRGKIASV
FSNARAALALQQEFGSLDAALWQFVGGQPKINRWVSMSDVPASTEESKAM
SKFLKKRGFKFVGETICYAFMQACGLVNDHLVGCPNHSNADKL
>gid:30443  VC1730  DNA topoisomerase I
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQTATPTGKA
AAASTKKASTTDKEQQKREKERAALIKKMGVDPYHGWQANYQILPGKEKV
VAELQKLAKDADSVYLATDLDREGEAIAWHLREIIGGDEKRYKRVVFNEI
TKNAIQQAFKQPGELNMDGVNAQQARRFMDRVVGFMVSPLLWKKVARGLS
AGRVQSVAVKLLVEREREIKAFVPEEFWDINADTLTADKQDFRLLVAQKD
GLAFKPVNETEALAAVAALNKAQYEVCKREDKPTTSKPSAPFITSTLQQA
ASTRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVENLRGYITKH
YGEAYLPSQPNVYGSKQNAQEAHEAIRPSDVTVTADDLEGMEADAHKLYA
LIWNQFVACQMTPAQYDSTTVSVKAAEYTLKAKGRILKFDGWTRVQRPLG
KNEDQILPPVKVGDSLKLVSLDPKQHFTKPPARYTEAALVKELEKRGIGR
PSTYASIISTIQDRGYVKVDQRRFFAEKMGEIVTDRLDENFDDLMNYDFT
ARMEEKLDQIAEGEVNWTAVLDEFFADFSRDLETAEQDESLGGMKPNHIV
MTNILCPTCSRPMGIRTASTGVFLGCSGYGLPPKERCKTTINLGDEEGVI
NVLEEDVETAALRAKKRCPICETAMDAYLIDDKRKLHVCGNNPNCEGFIV
EEGEFKVKGYEGPTVECDKCGSDMVLKNGRFGKYMGCTNDACKNTRKILK
NGEVAPPKEEPVHFPELPCENSDAYFVLRDGASGLFFAASNFPKSRETRA
PLVEELKRFAERLPEKYQYLTSAPAHDPDGLPAVVRFSRKEKEHYVRTET
EGKPSGWMAVYQEGKWLVTDKRKNAK
>gid:30472  VC1758  integrase, phage family
MANNLTARQIQTAKPKDKLYRLSDGGNLYFCVRPSNSRSWQFRYKRPGQD
KITYLSFGTYPDMSLAEAREKALEARKQLADGIDPQLAKEEQKAKTITEQ
NATFKFVAEQWKATKEGQIKEKTLEGNWRKLELYAFPKLGSIPVSKLTAP
MAIAALRPIESQGLLETVKRTAQLMNEIMNYAVNSGVIHANPLAGIRDVF
KKHKVVHMKALQPHEMHDLIRTVATANIQHVTRFLIEWQLHTMVRPNEAS
GARWEEIDMVNKLWIIPKERMKMNREHVVPLTAQTLAILEAIKPISGHRE
FIFPSSRNPKVPTDSETANKALGRMGFKDRTTAHGLRALASTTLNEQGFE
PDVIEAALAHTDKNQIRKAYNRTDYLDSRRKLMSWWSEHIEKSSYGSYSV
AGTGYLHLLKA
>gid:30499  VC1786  DNA repair protein RadC, putative
MTHFPRHRYLLSQRAYEHRVLEEAAEILEQRYVRGETFARTENTTEYLRC
KLAGYEHEIFAVLFLDNQHRLIEFKELFRGTVDAASVYPREVLKEALNVN
AAAVIFAHNHPSGDPEPSQADRRITQRLKDALSLVDIRVLDHVVVGKSSV
SFAERGWL
>gid:30502  VC1789  transposase OrfAB, subunit B
MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEA
HAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRK
ASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFAR
KVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQ
LLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEI
TRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
>gid:30503  VC1790  transposase OrfAB, subunit A
MISSPHKLTGDIMTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVG
KSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILK
KATALLMSDSLNNS
>gid:30512  VC1799  hypothetical protein
MNALELERAQYLKRLMSDLDRSGRGQKGVIVQAAMDHLCISKSKLYQELT
DLGWTSGRKTRADNGDLALTKEETELLSNMIRQSKRESGKALMTVRDAVD
IALANGELTRHVSESTVLRAFKRFRVHPDQLDMMETTMSQRSLFPNHAWQ
FDVSICVLYYLRGGKGLQVMSKDEFYKNKPKNLDRIVNERVLRYLATDHY
SGAFFLRYYLAPGENTETITQFLLEAFCERDTGELMYGVPQILIWDAGSA
NIAHQTRHMLDMLEVKHIAHTPGRPWAKGQVESTHNLVERRFEGRLAFMT
VQSIEELNRHAVQWSIGFQSLKEHSRHKNSRFGLWQTIRAEQLRLIKDVN
LVKSMMQQTKPEVRKVRPNELSISFAPKGYASMDYSLAHIPHLIAGDEVK
VFANPYKAPAIRVISVDDSGQEHTHEATPIERDAAGFNLLAPIIGAEHKS
VRETDADHNRKRLDIQAWGTDNPRDIKKLRKGKVAAFDGRINPMADIEQQ
VVPSFMPRRGTVMSMEGQPLTEQKMSFIGALNRLQRRLNPTKEELAVMRK
VLKQQYPDGMTDNELQVFTEQWEQKGNEHAQSATR
>gid:30526  VC1814  deoxyribodipyrimidine photolyase
MSKKIGLYWFTNDLRVNDNPLLEQASQQVDRLICLYCYPSITPFLARYAQ
QTQWGEAKKRFLNQTLADLDHSLSTLGQKLWVTPLLPYQALRHLLTQVEI
TDIYVDAVAGSDERQAIARIHQDFSSVHIHQQALHSLLSEPQLPFALEAL
PSTFTQFRKQVETISLSAPMGYPHVLPPIEQGWQLPLMDIVTEPNHSAFV
GGEQAGLTHCQNYFSSLLPSRYKETRNGLDGMDYSTKFSPWLALGAVSPK
TIYAMLQRYEAVHGANDSTYWIFFELLWREYFYWYARRYGAKLFRFSGIG
EKKPLTSFYAQRFLQWKHGETPFPIVNACMRQLNQTGYMSNRGRQLVASC
LVHELGLDWRYGAAYFETQLVDYDVGSNWGNWQYLAGVGADPRGSRQFNL
EKQAHTYDPKGEFVAKWCGTACDKLNALENLALDSVDMVDWPIAASAYLL
IHHPQNKESSS
>gid:30557  VC1845  Holliday junction DNA helicase RuvB
MIEADRLIAPISNHFKDEEVIDRAIRPKKLADYQGQDHVRDQMEIFIQAA
QMRQEALDHLLIFGPPGLGKTTLANIVANEMGVNIRTTSGPVLEKAGDLA
ALLTNLEENDVLFIDEIHRLSPMVEEVLYPAMEDYQLDIMIGEGPAARSI
KIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEYYKVADLQHIVQRSAQ
CLGLSMDSEGALEVARRARGTPRIANRLLRRVRDYAEVKGDGHICAQTAD
RALNMLDVDHQGFDYMDRKLLLAIMEKFSGGPVGIDNLAAAIGEEKDTIE
DVLEPFLIQQGYLQRTPRGRIATDRAYLHFGIEK
>gid:30558  VC1846  Holliday junction DNA helicase RuvA
MIGRLRGTLIEKLPPQILIEVGGIGYEVQMPMSCIYELPNIGEEAIIYTH
FVVREDAQLLYGFNTVSERALFREVIKANGVGPKMGLAILSGMTANQFVT
CVEKEDISTLIKLPGVGKKTAERLVVEMKDRLKGWGAGDLFTPATDAAPV
DSTPVIAQNAQEEAMSALLALGYKPPQASKAVSQVAKAGMSSEELIREAL
KSMV
>gid:30559  VC1847  crossover junction endodeoxyribonuclease RuvC
MSVILGIDPGSRVTGYGVIRQQGRHLIYLGSGCIRTSDLELPLRLKQIYA
GVSEIITQFQPDAFAIEQVFMAKNADSALKLGQARGSAIVAAVNAELPVY
EYAARLIKQAVVGTGAADKSQVQHMVQQMLKLPGKPQADAADALGVAICH
ANTNKTLIALAGQATSARRGRYR
>gid:30567  VC1855  ATP-dependent helicase, DinG family
MLPSRHRTLDTSMLTKNIQDSIRNSYQNLQNQLENFIPRRAQNFLVAEMA
KTLCGAYHKSTQMLVAEAGTGIGKSLSYLMAVIPVAVVNKRKVVISTATV
ALQEQLLNKDLPLYRRISDQNFSFILAKGRQRYCCSERLAAACGIDDGQI
ALFESKPKPHETELLAELHTALSQGKWDGDRDGWPSPISDELWSVIVSDK
HSCNGSFSVHRHCPFQKARSELDKADVIIANHSLVMADADLGGGVILPAP
EETIYVFDEAHHLPTVAREHASAAATLKGAASWLEKLNQSLSKFTALGDE
KRAERFAEEARTAIQYLIPTLNQLPKQFMAEQFVEGIYRFEHGELPQWLA
DESQALSKSSQKAMQSVSKVADLIAEKVKEGELATRIAEPALGELGFYVQ
RLENLTQVWQLMAKPNKDKGAPLARWLEVSPEREGDYLVSVSPLEIGWQL
DQQLWSRCVGAILVSATLRALNSFGFFCRQAGISDKAEDGVQFLALASPF
DYPTQGELLIPKMEMEPQAEGYTAYLAKKVLCYLQADKANLVLFASYWQM
REVAESLKVEFTKRGWALQVQGEKSRSEILNKHKKLIEKQKTSVLFGTGS
FSEGLDLPGELLENLIITKIPFAVPTSPVEQAHAEYIQELGGNPFMQITV
PEASKKLIQSVGRLLRKERDSGRVVILDRRVVSKRYGKALLDALPPFKRT
IEY
>gid:30569  VC1857  primosomal replication protein N``
MVGGMMESYSKFHTILNELKHSAAQFDRQRGEHHRPLFDEVLFHCHGKLL
TPCVEEAHSTLQALIREKESGRLTALRAEYLSERLLAQIAALTRELSTQN
VRRNEPKPHAYFKKPINELYQELAQHQDWERRLMDLVRDKALLLEQASAT
EKAAAQQALLQSEQRLNRCREAKIKIEKRITTQERKA
>gid:30572  VC1860  exodeoxyribonuclease III
MKVISFNINGLRARLHQLQALIDKHQPDVIGLQEIKVHDEAFPRQEVEAM
GYQVYFHGQKAHYGVAILCKQTPVEVIKGFPTDNEEHQKRMIMATFADQN
GQKTTILNGYFPQGDNVEHETKFPYKRQFYRDLMTYLREHRSNSERLVVM
GDINISPLDLDIGIGEANRKRWLQTGKCSFQPEEREWLQTLLDWGLVDTF
RQLHPDVSDQFSWFDYRSRGFEDNRGLRIDVILATPTLAETCQEAGIDYE
LRAIDKPSDHAPIWTTFK
>gid:30598  VC1886  transcription-repair coupling factor
MTTHSLLSLFSAQGAGDKKAIGNLHGASLALAIAELANAHTSHTLLAVPD
PQTALKLLHEVEQFSHSEVALFPDWETLPYDNFSPHQDIISDRISRLYQL
PSLTRGITIVPVSTLLQRQSPRDFLLQHTLIVKRGDHFSLDKLRLQLENS
SYRHVDQVFGPGEYASRGSILDLFPMGSSDPFRIDFFDDEIDTIRTFDPD
NQRSIAEMDEIRLLPAHEFPTTAAAIEEFRNRWRQRFEARREPESVYSQV
SKGTWPAGIEYWQPLFFEHSETLFDYLPANSQLLVVGELEKAIDQFLTDV
DYRYDQRNIDPLRPLLPPNELWLRKDELFAHFKTLPQVQLTSSPIELRAG
RMNAQVQPLPVLAVEHQNKEPLAALRQFSEQFTGKIIFSVESEGRREALL
ELLQRIKLRPQSQNDFSLACQQTEKYSLVLGSAERGFIYGDNQVALICES
DLLGDRVIQRRRKKDRKNVTNSDAVIRNLAELKPGQPVVHIDHGIGRYLG
LQTLEAGGMVSEYVMLEYQNEAKLYVPVSSLNLISRYSGGAEEAAQLHKL
GGEAWVKARRKAAEKVRDVAAELLDVYAKREIKPGFKFHLDREQYATFKA
TFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFGKTEVAMRAAFVA
TDNGKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQI
LQDVADGKVDILVGTHKLLSSEIRFADLGLLIVDEEHRFGVRQKEKVKAM
RADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVRQSED
SVIREAVLREIMRGGQVYFLHNQVETIDKVAADLEKLVPEARITVAHGQM
RERELEKVMNDFYHQRFNLLVCTTIIETGIDVPTANTIIMDRADSLGLAQ
LHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTL
ATHDLEIRGAGELLGEEQSGQIQSVGFTLYMEMLEQAVEALKSGKEPALD
DLLREQTEVEMRLPALLPEEYIPDINTRLSMYKQIASVASKDELAELKVE
LIDRFGKLPDAALNLLAIAELKLNAMRLKVRKIEAHERGGYVEFYPNADI
NPVFLVKLLQSQPKLLAMDGPTKLKFTLPLVERSARIQFVADMLKNFQQN
VLPAR
>gid:30621  VC1909  hypothetical protein
MKTEDTDFMNIGLIIALVAILLILVLGYNIMLQYRVKVESAKKQESSRYV
AIIDATEDLIGNAHHLPFSKELLVCLNNRILDALQSMYDLDPKNKQLAQR
IENMKGQINHLQNNHPGGESTSFKVPSSDKQAIIMLKLVKRLRDTIRSEH
NKGRFETQAYVAENARLETIQIRINIENVIKRANDSILRGQPGTAIQLLR
KGIDVLSSKNDSYSNQAREKLQTMYDELEQKRQNKSASDLQQIEENERKS
DMDVLFGEKKKW
>gid:30626  VC1914  integration host factor, beta subunit
MTKSELIERLCAEQTHLSAKEIEDAVKNILEHMASTLEAGERIEIRGFGS
FSLHYREPRVGRNPKTGDKVELEGKYVPHFKPGKELRERVNL
>gid:30629  VC1917  conserved hypothetical protein
MQIKTKIVTLFLSLCLPTLPLLANAEETAPAAQVEEGIVITVNINTASAE
ELATLLKGIGLKKAQAIVDYREANGPFTHIDDLTNVKGIGEATVRNNAAR
ILL
>gid:30631  VC1919  DNA-binding protein HU-beta
MNKTQLVEQIAANADISKASAGRALDAFIEAVSGTLQSGDQVALVGFGTF
SVRTRAARTGRNPKTGEEIKIAEAKVPSFKAGKALKDACN
>gid:30703  VC1990  ATP-dependent helicase, DinG family
MIEKTFSQQGALGQAIPGFQPRQAQVDMAKAVASAIANQSQLVVEAGTGT
GKTFAYLVPALLSGKKVIISTGSKNLQEQLFHRDLPLMVSALGFFGQVAL
LKGRANYLCLDRLSRQMVESHTPESDPTLLTQLVKVRSWASSTQSGDLGE
CDDLAEDSPIIPTITSTNDNCLGKECASYQDCFVSKARRRAMDADVVVVN
HHLFLADLAIKETGFGELIPEAEVFIFDEAHQLPDIASQYFGQSVSSRQV
QDLAKDIELGYRTEAKDMRQLQKVSDKLVQAAMDLRIVLGEPGYRGNWRE
VLKVPTVAREVERLNEALQFALDVLKLALGRSQLLDTAFERATLILGRIR
RVCDVSVTGYSYWYDTTPRHFSLHITPLSVADKFREQIALKEGAWIFTSA
TLAVNEDFSHFTERLGLTPSAQFSLVSPFDYQQQAVLCVPRYLPEPNSSG
LAEKLVRMLAPVIEHNQGRCFFLCTSHSMMRDLGERFRERLTLPVLMQGE
TSKQKTLAEFMELGNALLVATGAFWEGIDVRGDTLSCVIIDKLPFTAPDD
PLLKARIEDCRLRGGDPFAQVQLPEAVITLKQGVGRLIRDKNDKGALIIC
DNRLVTRDYGGVFLASLPPIPRTRDLDVVTTFLQQLAITEINQRDS
>gid:30727  VC2014  conserved hypothetical protein
MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKML
AMIEPFSQVYASCGVHPLDVQSDFSLDLFHQYAQHPRVVAIGETGLDYHY
QPETADLQKLRFRQQIETAVALNKPLIIHTRNAQQDTLQLLREGKAQQCG
GVIHCFTEDLAFAQAAMELGFYISISGIVTFRQATDLKEVVKALPLDRLL
IETDSPYLAPVPHRGKENQPAYVVEVAAYIAALKGVSLTEVAQKTTQNFQ
NLFLR
>gid:30728  VC2015  DNA polymerase III, delta prime subunit
MSNLNSLYPWLVPVWQPWQAGLAAGKISSATLIQASEGVGVESLVELMAR
TLMCTSSQSEPCGFCHSCGLMQSGNHPDFHVVKPEKIGKSITVEQIRQMN
RIAQESSQLSGYRLIVIEPADAMNESSANALLKTLEEPAPNCLFILVTSR
IKHLLPTIVSRCQRLVLPAPTTALVVEWLKGQGITTPAYALHLCADSPLK
TRAFMLEGGAEKYHELESQLMNALSGDVNAQLKCIALIDADLTTHLYWVW
CVLTDAQKIHFGVQQDYYPPASAALAGRFTYSKLHVQTASLERLMEQLNQ
FSGLNTELLLLQWLYQFSDEETCL
>gid:30758  VC2043  DNA topoisomerase III
MTRLFIAEKPSLARAIADALPKPHKKEQGCIRCANGDIVTWCIGHLLEQV
EPDAYDERYKKWNMADLPIIPEQWQLRPRKSSSQQLTVVRKLLKEATQII
HAGDPDREGQLLVDEVIDYCKVPKSKKETVQRLLISDLNLSAVKRALQGL
RSNREFIPLSVSALARSRADWLYGMNMSRAYTLLGKKAGYQGVLSVGRVQ
TPVLGLVVRRDEEIEHFIPHDYFTLDALIPYQNGTEYFDIRARWKPSEAC
LPWQDEEGRVTNRKLVDNVASRIANQPATVTESEQDQTKQAAPLPYSLSA
LQIDAAKRYNFSAQQVLDLCQSLYEKHKLITYPRSDCRYLPKEHLAQAPD
VVAAIANNAQEMVTAVNDADLSLRSKAWNDSKVDAHHAIIPTPKKASVNA
LSGHEMKVYQLIARQYLMQFYPAAIYAEAKLVFNIAGGIFIAKGRQLLSA
GWKVLTGQQDEQEECVDKVPPLPVGIVLQCREGEIKQRQTEPPRHFTEAT
LLQAMTGIARFVADKELKKILRETDGLGTEATRAGILDTLFKRGLLQRDN
KLIKSTPAGRGLIHALPSEATYPDMTAHWEHQLQAIAEKGQAYQPFMQTL
QGRLEQLIEQVQVAPVPVSLQALPAVSKPAFKRTRRAPKSKARTYKA
>gid:30809  VC2096  seqA protein
MKTIEVDEDLYRYIASQTLHIGESASDILRRLLNVDGELATAAPAAEPKG
IVVSKDAAFDTKIDGVKAMRSLLISDEFAGLKNAIDRFMLILSTLHRIDS
ASFSEATMFKGRKRVYFADNEQTLLASGQTTKPKAIPNTPFWVITNNNTS
RKQQMVEQVMVRMGFPSDIIEKVTHSI
>gid:30961  VC2233  DNA polymerase III, epsilon subunit
MNTSNNAEYQRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTG
RHFHVYLKPDRDIQLEAIEVHGITDEFLKDKPEYKDVHEEFVDFIKGAEL
VAHNAPFDVGFMDYEFAKLGGAIGKTSDFCKVTDTLAMAKRIFPGKRNNL
DILCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQTSLQFSSVTQNSG
ELSAESLKRARSERKALKVLAASADELQAHQDRLDIVAKSGTCLWRS
>gid:30962  VC2234  ribonuclease HI
MNKQVEIFTDGSCLGNPGPGGYGIVMRYKQVEKTLARGYRLTTNNRMEML
AAVMALQALKEPCRVILTTDSQYVRQGITQWIHNWKLRGWKTADKKPVKN
ADLWQALDKETARHQVEWRWVKGHAGHRENEMCDELARQAAENPTEDDIG
YQPEPQ
>gid:30973  VC2245  DNA polymerase III, alpha subunit
MDTPCMSDPKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFT
NLCGLVKFYSTAHNCGVKPIIGADFTLQSEEFGDELTKLTLLAKNNVGYK
NLTLLISKAYLRGHVQHQPVIDKAWLVEHAEGLIVLSGGKSGEVGRALLK
GNQQQVERCIEFYQTHFADHFYLELIRTGRADEESYLHFALDVAEQYDLP
VVATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPKQYLRSEAE
MCELFADIPEALANSVEIAKRCNVTVRLGEYFLPNFPTGGMAIEDFLVMK
SREGLEERLEFLFPDPEVRAKRRPEYDERLQVELDVINQMGFPGYFLIVM
EFIQWSKDNDIPVGPGRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPE
RVSMPDFDVDFCMDKRDQVIDHVAEMYGRDAVSQIITFGTMAAKAVIRDV
GRVLGHPFGFVDRISKLVPPDPGMTLEKAFIAEPALQELYDADEEVKELI
DKCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDAEGNFPVTQFDKND
VETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIPLDDAR
SFRNLQDAKTTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQS
GMVDNFIDRKHGREAISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQ
VLSGYTLGGADMLRRAMGKKKPEEMAKQRAVFQEGAEKNGVDGELAMKIF
DLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPAEFMAAVMTADMDNTE
KVVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGAIVYGIGAIKGVGEGP
IEAILEARNKGGYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLGPHR
AAMMASVDDAVRAASQHHQAEAFGQADMFGVLTDAPEEVEQKYTQVPEWP
EKVRLEGERETLGLYLTGHPVDEYLKELTKYTSCRLNEAAPTRRDQSLTV
AGLVIAARVMTTKRGTRIGLMTLDDRSGRMEVMLYSEALDRYAEWLEKDK
ILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKFARGLSISILQSQIDQQ
FFERFSHILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSDTLLDEL
KQLLGHDQVELEFN
>gid:30974  VC2246  ribonuclease HII
MAKKPSIELPPFEIPAGYALIAGVDEVGRGPLVGDVVTAAVILDPNRPIM
GLNDSKKLSEKKRLALFPEIQVKALAWAVGRCSPQEIDELNIFQATMVAM
QRAVAGLRIQPDLVLIDGNKIPKLPMEAQAVVKGDLRVAQISAASIIAKV
IRDQEMEALDKQYPQFGFAKHKGYPTAAHFAAIEQHGVIEQHRKSFGPVK
RALGIE
>gid:31015  VC2287  DNA-damage-inducible protein P
MQDRIRKIIHVDMDCFFAAVEMRDNPAYREIALAVGGHEKQRGVISTCNY
QARKFGVRSAMPTAQALKLCPQLHVVPGRMSVYKSVSQQIQTIFQRYTSL
IEPLSLDEAYLDVSESTAYQGSATLIAQAIRRDIWQELNLTASAGVAPIK
FLAKVASDLNKPDGLYVVTPDKVQEMVDSLPLEKIPGVGKVALEKLHQAG
LYVGADVRRADYRKLLHQFGRLGASLWKKSHGIDEREVVTERERKSVGVE
YTFSQNISTFQECWQVIEQKLYPELDARLSRAHPQRGIIKQGIKVKFADF
QQTTIEHVHPALELDYFHELLEQVLTRQQGREIRLLGLSVMLKPELQMKQ
LSMFPSDGWQ
>gid:31047  VC2319  exodeoxyribonuclease V, 67 kDa subunit
MMFWDSEVAKRLLAQGALRPLDVQFARFIGKQAVLAGHNAAESELLSVLS
AALSAELGRGHICLPLCDAQGNRCDLAALIGLYGEASLQHSERWLAVDWQ
ALLQASPLVGQQGEAVPLMFDGSRLYLHRYWHYEKQLAARLTELAAPQRL
SPAELANLRERLNTLFARDYLGLWQALQQKPLSSVERIQLLNDRLDVVES
DALDWPAIEAVVEKAQRAADLQALEQLIPLTHCLNWQKVAAAVALTRRFA
VISGGPGTGKTTTVTKLLAALISQSMAQGKVPEIKLIAPTGKAAARLTES
MGKAVSQLAIEPEIAAAIPSSSSTIHRLLGAIPGSAEFRHHTRNPLHLDL
LVVDEASMVDLPLMVKLVEALPKHARLILLGDKDQLASVEAGAVLGDICT
FLNQGYGHEQGAQLAELTGFATLRQTASKTVNPVADCLCMLQKSYRFDAR
SGIGQLAKAINSGSPARVEAVWQQSFSDIEHFALSGEHYQQLLQTLVQAY
RPYLSLLNQPTEQFESTQQSMLTLAKSALDAFSRCRLLCALREGDFGVMG
LNTRIERALNAHKLIKTQEEIWYHGRPIMVTRNDHGLGLYNGDIGLCMRD
RDDDQGRLKVYFELPDGSIKAVLPSRVPQHETAYAMTIHKSQGSEFDLTL
LILPPDYSPILTRELVYTGITRAKKQLKLYCDNKVLQRAIKVKTQRASGL
VARLEQ
>gid:31048  VC2320  exodeoxyribonuclease V, 135 kDa subunit
MSADSNKLAVTLDTLRFPLHGARLIEASAGTGKTYTIAGLYLRLVLGHGC
AETRHAHPLSVDQILVVTFTEAATAELRDRIRRRLHDARLAFARGASDDP
LLRSLLAEFTDHNLAVSLLLSAERQMDEAAIFTIHGFCQRMLTQNAFESG
SRFENEFVTDESRLKAQVVADYWRRQFYPLPISLASEVRRLWPAPSALLA
EIAGYLSGPPVKLTTPLMEGDLAALQQAQIARICEIKQHWLVEREEIEPA
VTGSDLHKNSQNALLRRLPILDAWAQSETHDLHVPSELEEFTQSGLLAKS
KKGNPPQLALFERIEAFLAEPVSLKTPLLVHAIHHCRHWLAKAKSTHHWL
SFDDLLTQLSAALDNDEQGLLGERIRTLYPVAMIDEFQDTDPLQYSIFSR
LYLDYPQCGLLMIGDPKQAIYAFRGADIFTYIKARNQVNAHYTLGTNWRS
SAAMVAAVNQVFSSATHPFIYSDDIPFQPVAASPGADKRHWSLEGQVQPA
LTYWWPEDLDKPQSKTDYYAQMAEACAAQIQHILTASASGAATFHRGEAI
EAGDLAVLVRTGNEARMVRDALSQQGIASVYLSNRDSVFASDVAQDIERL
LLAVWQPEDERLLRAAVASNLFALTASELDALNNDENEWEQLIAEFRQYR
RLWSERGVLPMLRAVLTQRHIAERWLAESEGERWLTDYLHISELLQQATR
EIDSDQGLLRFLTQAMADAAQGLGGSDEQIQRLESERRLVQIVTIHKSKG
LEYPLVFLPFVMSYRESSEGKYYDAESATTWVDLTGNEEALAKADQERLA
EDLRLLYVALTRAVYGCFIGIAPLRNGNSSQEPTSAHRSAMGFLLQDGQE
GGIADLQQALLKQCENLPDVVQCPPPKRFEQAYQPPQLDERELTARELSQ
AIDRRWRVTSYSGLVMQSSHARHDPLQELPLLEVGGFDLDSAQERDGAAL
ESVERSIFNFPRGARPGTFLHSLFEEVDFQQSAHSEPNTKIILELMESEQ
IESEWLPVLQQLVDTVLSTPLDGKALRLQQIMAAQRLTELEFLLPIEVLD
APTLNRITQRHDPLSAHAGDLGFHAVQGMLKGFIDLVFQYQGRYYVLDWK
SNHLGDDPAAYHPQRLGSAMAEHRYDLQYQIYALALHRFLRSRLAHYNYE
QHFGGVFYLFLRGMDGRGDQGVFHTKPSLALLDELDGLIAGRELAQRASK
AGQMELDL
>gid:31050  VC2322  exodeoxyribonuclease V, 125 kDa subunit
MFTVYHSNQVETLKILLVHLIKNEPLDDPFIPESILVQSPGMSQWLKMAL
ASELGVAANLEFPLPATFIWQMFTQVLPDVPQRSAFNKEAMSWRLMELLP
KLLDRTEFQPLQRYLQDDEDDSKRFQLAEKIADIFDGYLVYRPDWILSWE
AGEDVVEIADQHPWQPILWRELYAYTHKQGHSIYHRANLYQRFIEQLASG
DFDRSTWPKRLFIFGISALPPRYIDALRAMGEHIDVHLMLTNPCQHYWGD
IRDRKYLARVAAQKRKILQINGEQVTIGSEVSPLKGDVENYLQESMHLSH
AVGNSLLASMGKMGRDNLYLLAQNDQSELELFIEIQRDSLLHHIQADILH
LQEHQDDAKFASSGHKPSIAAQDDSLQIALCHSPIREVEVLHDRLLAEFE
RDPSLKPRDVIVMVPDINAYAPYIQAVFGNAPGERFIPFSISDRSADQES
PILTAFLQLLALPQSRCLASELLELLETPAIMARFAIDEEEFATAKRWVE
EAGIRWGLNSDTGAEFELPASEQNTWQFGIERMLLGYAMPAEAGLYELGG
QWLAPYNQVQGMSAELAGKLAHFVQTLSELRSQLAQTQSMEQWRYWLNEL
LERCFSVDLQGELALKTIRDSLVNLKQQLADAGYQQAVSPAIIRQVLTNK
LSGTRISQRFLAGQVNFCTLMPMRSIPFRRVCLLGMNDGVYPPNEMVEGF
DLRNVQRRVGDRSRREESRYLFLEALLSAKEQLYISYVGRSIQDNSERVP
SVLVSELLEYCEQNYCLAGDENLESDDSGRRLVEHLTTQYPMVPFSPQAF
IAGSFAREWLPAARRQGQSSADFLTPLSDYLLEVSWPMELDLVELQRFWR
LPVEYFFKRRLKVSFEPPLAVLEDDEPFALDGLSAYQLRDELVENLLACR
DGAERDQVVAQFAKQQRAQGKLPVAAFGDLELAQSAQQALALAEKIGFLC
HQPLEDEEIDLRLQPFDDGREVLLRGWLVKRYQSGLVRARSGAIRSEDLL
AAWIDHLCLAASGKAVTTHLIGYERKEGVQHQMLPPLNDAQQAKTLLSEL
VALFCQGMNQPLAYFPKTALACVEAGFSRGKWQEDEEKSYKKMADTFNDS
FYIKGEGGNRYIARIWPQWSDELAKTLRQLAIKVLQTPRLQVQDAEQV
>gid:31080  VC2353  conserved hypothetical protein
MFLIEKIRPMNETIPPPLEWSLFDTHCHFDFPPFTATPELELQKAAQHGV
RRLVVPSIGPQDWQAVTELAQRFPSTIYYALGFHPLYLDASSPTHLPALE
KALMQAEQACVAVGECGLDGMIDVDVALQEQMLIAQLSMASQAKLPVILH
SRRTHNRLLQLLKQQRFQQGGVLHAFSGSVQEAQQFVDLGFKIGVGGVIT
YPRANKTRQAIAALPVEHIVLETDAPDMPLNGFQGQANHPAQLAKVLETL
AELKGVSAQYLAPILWQNSQMLFGLCEQNRNKM
>gid:31086  VC2359  uracil-DNA glycosylase
MSESLTWHDVIGNEKQQAYFQQTLQFVESQRQAGKVIYPPAKDVFNAFRF
TEFGDVKVVILGQDPYHGPNQAHGLCFSVLPGVKTPPSLVNIYKELAQDI
PGFQIPPHGYLQSWAQQGVLLLNTVLTVEQGMAHSHANTGWETFTDRVID
ALNQHRNGLIFLLWGSHAQKKGQMIDRQRHHVLMAPHPSPLSAHRGFLGC
RHFSKTNQLLQAQGIAPINWQPELES
>gid:31087  VC2360  endonuclease IV
MYEKLIGAHVSASGGVELAPVRAHEIGANAFALFTKNQRQWAAKPLEASS
IRAFKANCKKWGFGSEAILPHDSYLINLGAPEPEKLDKSRAAFVDEMLRC
DQLGLTLLNFHPGSHLQQVSEEACLATIAESINLAHRQVPNVIAVIENTA
GQGSNLGWRFEHLAAIIDQVEDKERVGVCLDTCHTFAAGYDLRTKAACDE
TFAEFERVVGMHYLRAMHINDSKGKLASRVDRHHSLGMGEIGWECFEYIA
QDARFNGIPLILETIDPDIWATEIATLRKFSTQKEN
>gid:31112  VC2385  RNA-directed DNA polymerase
MFTLKRTKLNILTTLREQLLTNNVIMPQEFERLEVRGSHAYKVYSIPKRK
AGRRTIAHPSSKLKICQRHLNAILNPLLKVHDSSYAYVKGRSIKDNALVH
SHSAYVLKMDFQNFFNSITPTILRQCLIQNDILLSVNELEKLEQLIFWNP
SKKRNGKLILSVGSPISPLISNAIMYPFDKIINDICTKHGINYTRYADDI
TFSTNIKNTLNKLPEIVEQLIIQTYAGRIIINKRKTVFSSKKHNRHVTGI
TLTNDSKISIGRSRKRYISSLVFKYINKNLDIDEINHMKGMLAFAYNIEP
IYIHRLSHKYKVNIVEKILRGSN
>gid:31119  VC2392  mutator MutT protein
MKRIHIVAGIIFNSDQSEIFITKRPDHLHKGGFWEFPGGKVEAGESREQA
MVRELEEEIGITVTEQQAFQHFDFDYTDKSLSFDFMLVTAFDGQPHGREG
QQGGWVKIADLANYRFPEANDPVVKQVIAQFG
>gid:31144  VC2417  single-stranded-DNA-specific exonuclease RecJ
MACHSMIEIQRRPEPDLSLLPDHIDPLLRRLYLSRGVSNVAQLEKAAKAL
HSFKQLHGIDRAVELLFAAIAEQKRIIVVGDFDADGATSSALSVLALRML
GSRNVDYLVPNRFEDGYGLSPEVVDQAIERGAEMIMTVDNGVSSLEGVRY
AKQKGLQVVVTDHHLPGQELPEVDAMVNPNLQQCAFPSKALAGVGVAFYL
MMALCVHMRQQGWFAAQGMVEPKLMELIDLVALGTVADVVPLDDNNRILV
HQGLQRIRAGLARPGIQALIEVAKRDARRLVAADFGFALGPRINAAGRLD
DMSFGVELLLCNNIHAARRMASELDGLNQTRKEIEEGMKQEAVAFCERLQ
LSDDRELPYGLVLFQRDWHQGVIGILASRIKEKYHRPVIAFAEGGDGKLK
GSCRSVPGLHMRDALDKIDTQNPGIILKFGGHAMAAGLTIEEQNFERFCR
LFDQLVREELDEAALKGIILSDGELKPEEFSLHTAELLRAGGPWGQAFPE
PLFDGEFKVLHQKLVGEKHLKLMLEPLYKGFPTNVMIDGIAFNVDLRRWP
DASVKTVRLAYKLDINEFRGNQSLQLMIDHLEAK
>gid:31146  VC2419  integrase/recombinase XerD
MSEALSPDQGLVEQFLDTMWFERGLAENTVASYRNDLSKLLEWMAQNQYR
LDFISFAGLQEYQSWLSEQNYKPTSKARMLSAIRRLFQYLHREKVRADDP
SALLVSPKLPTRLPKDLSEAQVEALLSAPDPQSPLELRDKAMLELLYATG
LRVTELVSLTMENMSLRQGVVRVMGKGGKERLVPMGENAIEWIETFLQQG
RSLLLGEQTSDIVFPSSRGQQMTRQTFWHRIKHYAVIAGIDVEKLSPHVL
RHAFATHLLNYGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHNEHHP
RA
>gid:31157  VC2430  topoisomerase IV, subunit A
MSTEISFDGVEQLPLRKFTEDAYLNYSMYVIMDRALPYIGDGLKPVQRRI
IYAMSELGLSASAKYKKSARTVGDVLGKYHPHGDSACYEAMVLMAQPFSY
RYPLVDGQGNWGAPDDPKSFAAMRYTEAKLSKFAEILLSELGQGTVDWQP
NFDGTMQEPKMLPARLPHILLNGVTGIAVGMATDIPPHNVREVADATIHL
IDNPNAPLTDLMQYVKGPDFPTEAEIITPTVELEKIYRSGRGSIKMRAVW
CKEGSDIVITALPHQVSGAKLLEQIAAQMRAKKLPMVEDLRDESDHENPT
RIVIVPRSNRVDCDLLMNHLFASTDLEKSFRVNLNMIGLDNRPQVKGLVQ
ILSEWISFRRETVRSRLQYRLDKVLARLHILQGLLIAYLNLDEVIEIIRN
EDDPKAVLMARFDLTDIQADAILDTKLRHLAKLEEMKIRGEQDELEKERK
KLEELLGSERRLNNLLKKEIKADADKFGDDRRSPLVEREEAKALTERDLM
PSEAITVVLSEKGWIRHAKGHDVDCQSLNYKAGDNYLTHACGKSNQQAVF
LGSDGRSYSLESHTLPSARGQGEPITGRLNVAEGTTIRQVVMGEEDQLWL
VGSDAGYGFVCKGDDLLSKNRSGKALINLPENSEVMTPQVIADLDNDEIL
AITNQGRMLLFPIKDLPQLSKGKGNKIINIPAAKAKTREEVLSNLMVLPQ
GASITLYAGKRKLGLKVSDLDNFRGERGRRGALLPRGLQRVTAIEIETSA
EPESTPHSEDE
>gid:31158  VC2431  topoisomerase IV, subunit B
MTEQYNAGAIEVLNGLEPVRRRPGMYTDTTRPNHLGQEVIDNSVDEALAG
YASKIQVILHADQSLEVIDDGRGMPVDIHPEEKVSGVELILCKLHAGGKF
SNKNYQFSGGLHGVGISVVNALSKRVEVAVRRDGQVYEIAFEHGDKVTEL
TVTGTCGRRNTGTSVHFWPDTKYFDSPNFSVSRLINNLRAKAVLCPGLEI
IFTDKVNNNEHRWLYEDGLKDYLAEGVKGYTLLPEEPFTGEFTAQTEAAT
WAVIWLPEGGELITESYVNLIPTAQGGTHVNGLRQGLLDAMREFCEFRNL
LPRGVKLTGEDVFDRCAYVLSIKMQDPQFAGQTKERLSSRQSAAFVSGVV
KDAFSLWLNEKPQLAEQLAEVCIANAHSRMRASKKVVRKKIASGPALPGK
LTDCTVQDLNRTELFLVEGDSAGGSAKQARDREFQAVMPLRGKILNTWEV
SADQVLASQEVHDISVALGIDPDSDNLEALRYGKVCILADADSDGLHIAT
LLCALFTRHFRALVKAGHVYVAMPPLYRIDCGKEVFYALDDQEKEGVLER
LSQKKAKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIDDAEATDEM
MDMLLGKKRADDRRAWLQRNGDMAEV
>gid:31162  VC2435  MutT/nudix family protein
MQDANQQPVSFNKKDVEILNKETLFKGFFRMVKYRFKHKRFAGGWSEPVE
REMFERGHAAAMLPYDPIRDQVVIIEQIRVGALEHAQPWQLEIVAGVIDT
DESAEQVVRREAVEEAGLTVGRIEKITSYYPSSGGCSEKLDVFIGEVDCS
QAGGIHGLDCEGEDIKVHVMSRTEAYQLVKDGRIENGASIIALQWLALNY
QPLQQQWQ
>gid:31185  VC2459  DNA repair protein RecO
MSDGLQRCFVLHRRPYSESSLILDVFSEEYGRVTLMAKGARGKRSNLKGA
LQPFTPLLLKWSGNGSMKTLRQAEPISLGLPLSGVYLYSAMYINELVDRV
LMPEVASPGLFHDYLFALTELAQSTNPEPALRRFELALLAAMGYGVDFLH
CAGTGEPVSPDMTYRYREQKGFIASVRRDNLTFLGNELIAISERRFTSKE
QLQAAKRFTRLALKPYLGGKPLKSRELFRQTTLPRARSTEE
>gid:31235  VC2502  DNA polymerase III, chi subunit
MPTATFYLISRDSAQATPEGLAQYVLYLTRHFAAQGARIYLQCQDKPHAE
QLAERFWQIEPEQFLAHNLVGEGPKSGTAIEIGYVGVSPSWNRQLAINLA
DNQTTFARTFTEVVDFVPCAENAKQLARERYKLYRQAGYQLQTVEIQYP
>gid:31239  VC2506  RNA polymerase-associated protein HepA
MSFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYARSDAPV
TRVIFNVGDVVDSQQGWSLQVEQVVEDQGVYTYLGTRVDTEESGVALREI
FLSNQIRFNKPQDKLFAGQIDRMDNFVLRYRALTNQYQQHKSPMRGLCGM
RAGLIPHQLYIAHEVGRRHAPRVLLADEVGLGKTIEAGMIIHQQVLTGRA
ERILIVVPETLQHQWLVEMMRRFNLHFSIFDEERCVEAFSEADNPFETQQ
YVLCSLDFLRKSRQRFEQALEAEWDLLVVDEAHHLEWHPEKPSREYQVIE
ALAEQTPGVLLLTATPEQLGRESHFARLRLLDADRFYDYEAFVKEEEQYA
PVADAVTALFSGEKLSDEAKNKITELLSEQDVEPLFKALESHASEDEIAL
ARQELIDNLMDRHGTGRVLFRNTRAAIKGFPVRNVHLLPLEIPSQYTTSM
RVAGMLGGKLTPEARAMKMLYPEEIFQEFEGEESSWWQFDSRVNWLLEKV
KAKRSEKILVIASRASTALQLEQALREREGIRATVFHEGMSIIERDKAAA
YFAQEEGGAQVLICSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLD
RIGQKRDIDVYVPYLTETSQAILARWFQEGLNAFAETCPTGRAVYDAFAE
RLIPILAAGGGEELEVIIEESAKLNKTLKSQLEVGRDRLLEMHSNGGEKA
QQIAEQIAKTDGDTNLVTFALSLFDAIGLHQEDRGENALVVTPAEHMMVP
SYPGLPYEGATITFDRDTALSREDMHFISWEHPMVQGGIDLLMSEGVGTC
AVSLLKNKALPVGTILLELVYVVDAQAPKRSGISRFLPVSPIRILMDARG
NDLSSQVEFESFNRQLSPVNRHLASKLVSSVQHDVHRLITASETAVEPRV
SAIREQAQRDMQQSLNSELERLLALKAVNPNIRDEEIEVLDQQIKELTGY
IAQAQYQLDSLRLIVVAHN
>gid:31296  VC2564  ATP-dependent RNA helicase DbpA
MNANSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKT
GSGKTAAFGLGVLSNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIH
NIKVLTLCGGMPMGPQIGSLEHGAHILVGTPGRILDHLSKDRIDLSELNT
LVLDEADRMLEMGFQEALEAIIAAAPAERQTLLFSATYPASIEQIAQSVT
RNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLHHQPTSSVVFC
NTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVAT
DVAARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDN
ESYRVAQIDEYMDIAIEPSTLPQPAAGARPYAANMVTIQIDGGKKDKVRP
GDILGALTSDGELTAEHIGKINLFPMRAYVAVHKKIATKALNKIANGKMK
GRQFRARLLK
>gid:31358  VC2626  DNA adenine methylase
MKKQRAFLKWAGGKYSLVEDIQRHLPEARELVEPFVGAGSVFLNTDFERY
LLADINPDLINFYNLLKTEPQAYIHEAKRWFVPENNRKEVYLDIRKQFNQ
SDDAMFRSLAFLYMNRFGFNGLCRYNKKGGFNVPFGSYKKPYFPEQELEF
FAEKAQRATFICASYGETFARAQSDSVIYCDPPYAPLSTTANFTSYAGNG
FTLDDQAALADIAEKTAKERGISVLISNHDTTHTRRLYRGAQLNVVKANR
TISRNGAGRNKVDELLALFTPHLSSQA
>gid:31410  VC2678  primosomal protein N`
MRPSIARVCLPVPLDKSFDYLIPAHLFPVLGGRVQVPFGRQTLVGIVQSL
THQSDFPIEQLKSVQAVLDDAPVWPDKLQSLLHWCSQFYHYPLGETYANA
LPGALRKGKAAELTSHKEWRLTALGQEQLMQGVKRGAVKQAQVLHLLQHG
ALSHQTLLDEEVSSTTLKALVEKGWIECEERKPVARPWPQELEAKVDKPR
LNQEQAIAIAAVNSQQGFGCFLLEGVTGSGKTEVYLNLITPVLARGEQAL
VLVPEIGLTPQTINRFRQRFNVPVEVMHSALNDTERLNAWLAARDKVAGI
VIGTRSALLTPFAKLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHLEN
IPIVLGSATPALETLHNALSGKYHHLQLTQRAGNALPTRNHALDVKGLYL
ESGLSAPLIAEMRRHLSAGNQVMLFLNRRGFSPALMCHECGWIAECQRCD
AYYTYHQHSNEMRCHHCGSQRPVLHQCKGCGSTQLVTVGVGTEQLEAQLH
TLFPEYRSVRIDRDSTRRKGSLESALTAIRKGEYQILIGTQMLAKGHHFP
DVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTH
HPEHSLLQALLHKDYHHFALTALEERKLAQLPPYSFLSLFRAEANHTAQV
EDFLRQVRETLRCNPWFDSECMVLGPTPAPLAKRAGKFRWQLLLQTPNRT
LMQKILQSARPALQQLPLASKVRWSIDIDPQDLS
>gid:31442  VC2711  ATP-dependent DNA helicase RecG
MSQLLSAVPLCELSGVGAKVAEKLEKVGLHTVQDLLFHLPLRYEDRTRVY
PIVQLHHGLWAAVQGKVMAVDTLFGKRKMLTVKISDGNGTLTLRFFNFTA
AMKNNFAEGKFVHAYGEIKRGNQGLEIIHPDYKFFTPAQTPDVEPNLTPV
YPTTEGLRQLTLRNLTDQALVLLEKSAVQELLPSGLYDQQMTLAQALKII
HRPSADIDLRLFEQGRHPAQIRLIMEELLAQNLSMLAIRSQGQQDVALPL
APVHQLKQQLLAQLPFSPTKAQQRVVAEIEADLAKPHPMMRLVQGDVGSG
KTLVAALAAVRAIEHGYQVALMAPTELLAEQHALNFAQWLEPMGIQVGWL
AGKLKGKARETELARIASGEVKMVVGTHALFQEQVSFDHLALVIIDEQHR
FGVHQRLELREKGAKQGAYPHQLIMTATPIPRTLAMTAYADLETSVIDEL
PPGRTPIQTVAIPDTKRDEIVERIRHACLNEGKQAYWVCTLIDESEVLEA
QAAAETAEELQRKLPEVKIGLVHGRMKPAEKQAVMQAFKNNELHLLVATT
VIEVGVDVPNASLMIIENPERLGLAQLHQLRGRVGRGTVASHCVLLFHAP
LSKTAQKRLGVLRESNDGFVIAQRDLEIRGPGELLGTKQTGLADFKIADL
VRDQQLVPQVQRIARHIHERYPQNAQAIIDRWLGERDIYAKA
>gid:31452  VC2721  MutT/nudix family protein
MSVSNCDYFSYIKKTFLLRSLRMSSKSLPEILDRETVAKSRLFTIEALDL
RFSNGEQRTYERMKPSGRHAVMMVPITAQGDLLLVREYAAGTERYELGFP
KGLVDHGETAEQAANRELKEEIGFGARQLTPLKEVVLAPSYFSSKMVLFV
AQDLYSEQLEGDEPEPLEIIRWPLAQAEDLLTHLDFCEARSITALLLALR
FLQA
>gid:31529  VCA0010  conserved hypothetical protein
MSGGRCLSISKESVLYSAPFQFDRATIMNLKTDIQQLNNRIDTCRRKLDA
AKSRADSEMVSKFTDELEALTKRLNSVKSKQDYDLNKMRKTIADMPFSRE
LTKLEQADLGKLKKSVKGLVIVHPTTKIGKALRVEVMTGFAPKPF
>gid:31576  VCA0057  deoxyribodipyrimidine photolyase
MRLVWFRRDLRSFDNTALTAALNSGDPVAAMYIATPEQWHQHHLAPIQAD
LIWRRLAELQQELAALNVPLFYQQVADFQAAAVAVSQLAKTLNATQVLAN
RDYELDEQQRDQLAQQLLSEQGIIWSAFDDKCVLPPGSVRTKQGEFFKVF
TPFKRAWLTLFQPPVIGKNRPVALWNVPSALAELVWHPEQAFDYPRIDST
PWAADFETVRAQLRDFCRERVQDYHQARDFPAREGTSSLSPYLAIGVLSA
RQCVARLYHESSMGELSEGAQVWLSELIWREFYQHLVAIEPNLSKSRDFV
EWGARLEWWNDNEKFQLWCEGKTGYPIVDAAMRQLNQTGWMHNRLRMIVA
SFLTKDLHIDWRWGERYFMSRLIDGDYAANNGGWQWCASTGCDGQPYFRI
FNPVSQGEKFDPNGDFIRRWVPELRSVSSAYIHQPWTYPAVNSVLYPARL
VDHKQEREVTLRLYKTAKG
>gid:31580  VCA0061  ATP-dependent RNA helicase, DEAD box family
MESTLQFKDLGLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSK
TGSGKTLAFVLPMLHKSLKTKAFSAKDPRGLILVPTRELAKQVYGELRSM
LGGLSYTATLITGGENFNDQVKALARGPRFIVATPGRLADHLDHRSLFLE
GLETLVLDEADRMLDLGFAKELRRIHNAAKHRRRQTLMFSATLDHADVND
MAMELLNEPKRIAIGVGSEEHKDITQHFYLCDHLDHKEALLDRILADAEY
RQVIIFTATRADTDRLTEKLNQNNLKAVALSGNLNQTQRNTIMGQFERAV
FKILVTTDVASRGLDIPAVTHVINFDMPKHTEEYVHRVGRTGRAGNKGDA
MSLVGPKDWESFKRVEAFLQQEIQFEVLAGLEGKFKGLKPRQAKPKAAPT
QRVNKAKAPSKSKKAAPRDKSFYQNVAVGDSVFIPKKKVAPKPEVDLEDD
ID
>gid:31716  VCA0198  site-specific DNA-methyltransferase, putative
MITLTVWAFNLFSPSKPIIFSFFAGSGFLDLGFETSGFDVRFVNEFHKPF
LDAYKYSREHMGLPKPKYGHYLGSIDDFVTGEKKQLLYDLVQEAKSEALT
GFIGGPPCPDFSVAGKNKGSDGENGILTRVYIDAIVQNQPDFFLFENVKG
LWKTGKHRAFYDAMKAHLEDAGYVLTDRLTNSIEFGVPQDRDRILMFGIH
RKHVGDKLTSIELARDFDWEREVKFDKTKVLDKSIWPELATYKENSIRKL
PKHLDNYRELTVEHWFQKNDVNQHLNAKHHFRPYSDKFKTIQEGDDKKKS
FKRLHRYRFSPTAAYGNNEVHLHPYKPRRLSAAEALAIQSLPKEFHLPPT
MTLSDMFKTIGNGVPFLASKCIAQTIHNYLESL
>gid:31720  VCA0202  IS1004 transposase
MGDYRSSSHVYWRCKYHIVWTPKFRFKILKGNVAKELNRSIYILCNMKDC
EVLELNVQPDHVHLVAIIPPKVSISTLMGVLKGRSAIRLFNKFPHIRKKL
WGNHFWARGYFVDTVGVNEEIIRRYVRHQDKKELEQEQQLELLRD
>gid:31721  VCA0204  ATP-dependent RNA helicase RhlE
MGFTSLGLSAPILKAIEEKGYNTPSPIQLQAIPAVLAGKDVMAAAQTGTG
KTAGFTLPILELLAKGPKVRANQVRALILTPTRELAAQIQDNVMLYGRHL
PLKSAVVFGGVKINPQMQRMCKGADILVATPGRLMDLYNQNAVKFDQLEI
LVLDEADRMLDMGFIRDIHKILKLLPEKRQNLLFSATFSTEIRELAKGLV
NNPVEISVSPANSTARTVEQCIYPADVKKKPDMLVKLVKEGNWQQVLVFM
RTKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVAT
DIAARGIDIPQLPQVVNFELPKIAEDYVHRIGRTGRAGEVGKAISLVSAI
EAPELFAIERLTQALLPRVNLAGFEPTNQLPESKLDTRPLKPKKPKKPKK
VEGAGENKGSVAENKPKAGHRGQPTGQARTAKKGGTHSEPKKPTKRPVRN
G
>gid:31791  VCA0275  IS1004 transposase
MGDYRSSSHVYWRCKYHIVWTPKFRFKILKGNVAKELNRSIYILCNMKDC
EVLELNVQPDHVHLVAIIPPKVSISTLMGVLKGRSAIRLFNKFPHIRKKL
WGNHFWARGYFVDTVGVNEEIIRRYVRHQDKKELEQEQQLELLRD
>gid:31795  VCA0281  integrase, putative
MSMAITDAWLRATNGKPYSGKTEISHRFGLGVRVSPKGKITWVYRANING
KMQRIKLGEYPAMKLRDAIQARESRAELVELGFDPRKSTRSANDDSIITL
NDLIDYWAENHARDNIKQCDALLKMFHTDITPTLGNYPAKQLELIDFMPV
FLKAKRRVSAKHSANLMTRFKQVLSYAVRHGLLKYNVLTELKKADVGVPT
TPKRSRQDEQGVKALWKAIDDISIHESNKNFLRLMLIFANRSNELRLAKK
ADFDLEKRVWTVPEENNKVRKKQGGAIRRAIPPLAEKIIMEQFAIWPNHT
MMFPPVNTEQDRPMSANVPVDFGSKLADRIEELGFPRTTNHDMRRTARNI
WESMGVPYHVAETMLGHKVHTGVQSHYLGKMRLSL
>gid:31796  VCA0282  IS5 transposase
MSHQLTFADGEFSNKRRQTRKELFLARMEKLLPWSQLLAVIEPFYPKAGN
GRRPYPLETMFRIHCMQQWYSLSDEAMEDALYEIASMRLFAHLSLDRAIP
DRTTIMNFRHLLEQHQLGRSVFEPINQWLSERGVLMKQGTLVDATIIEAP
SSTKNKTNQRDPEMHQTKKGNEWHFGMKAHIGVDAKSGLTHTLVTTAANE
HDLNQLSNLLHGDEEFVSGDAGYQGAHKRDELKGADVDWLIAERPGKVRA
LKKHPRKNKVAIHIEYLKASIRAKVEHPFRIIKCQFGFIKARYKGLMKND
NQLAMLFTLANLVKVDQLIRRQARSA
>gid:31804  VCA0291  site-specific recombinase IntI4
MKSQFLLSVREFMQTRYYAKKTIEAYLHWITRYIHFHNKKHPSLMGDKEV
EEFLTYLAVQGKVATKTQSLALNSLSFLYKEILKTPLSLEIRFQRSQLER
KLPVVLTRDEIRRLLEIVDPKHQLPIKLLYGSGLRLMECMRLRVQDIDFD
YGAIRIWQGKGGKNRTVTLAKELYPHLKEQIALAKRYYDRDLHQKNYGGV
WLPTALKEKYPNAPYEFRWHYLFPSFQLSLDPESDVMRRHHMNETVLQKA
VRRSAQEAGIEKTVTCHTLRHSFATHLLEVGADIRTVQEQLGHTDVKTTQ
IYTHVLDRGASGVLSPLSRL
>gid:31826  VCA0313  MutT/nudix family protein
MNHLAMAVVIKNNLVLVQKRFRKNTGMIFEFPGGSIDAGESGEQAAIREL
WEETGLRNLKLIGTHKSINENGGDIYHVVFSASMDAEPKEIEPYRQQTFY
WFEASQIPLNDFYSADVNFIKEHLGSYT
>gid:31837  VCA0324  DNA-damage-inducible protein J
MRTEMLSTRIDHDTKIAFTNVCDEMGLSTSQAIKLFAKAVINHGGIPFEL
RVPQPNEVTASAIQELVEGKGHKAESVEAMLNELTEGKVKHV
>gid:31883  VCA0371  transposase OrfAB, subunit B
MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEA
HAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRK
ASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFAR
KVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQ
LLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEI
TRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
>gid:31884  VCA0372  transposase OrfAB, subunit A
MISSPHKLTGDIMTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVG
KSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILK
KATALLMSDSLNNS
>gid:31932  VCA0421  hypothetical protein
MKKLLMVLTVMIALVGCDDATKAIDGAQAAANKAVDNLQQKADSLNLQDL
NLDVIGDATQKAQEFTQSIDLLINTDFTDHQAVVAATEKISNSYSCLVDV
SSEATAENLLDKIVSSVKNDQVLAIIEKGVAQAKTAKECVM
>gid:31958  VCA0447  haemagglutinin associated protein
MLGYAFPSILGNLMSKIYQMDAVDWLKTLENCSVDLFITDPPYESLEKYR
QIGTTTRLKESKSSSNQWFSVFPNTRFEELFREVYRVLKKGSHFYLFCDQ
ETMFLAKPIAESVGFKFWKPIVWDKCAIGMGYHYRARYEFILFFEKGKRK
LNDLSVPDVLEYKRVWKGYPTEKPVELLEVLIRQSSSENEIVADSFFGSG
STLIAANNLSRKYIGCDISSSAHEYFKNRA
>gid:31981  VCA0472  IS5 transposase
MSHQLTFADGEFSNKRRQTRKELFLARMEKLLPWSQLLAVIEPFYPKAGN
GRRPYPLETMFRIHCMQQWYSLSDEAMEDALYEIASMRLFAHLSLDRAIP
DRTTIMNFRHLLEQHQLGRSVFEPINQWLSERGVLMKQGTLVDATIIEAP
SSTKNKTNQRDPEMHQTKKGNEWHFGMKAHIGVDAKSGLTHTLVTTAANE
HDLNQLSNLLHGDEEFVSGDAGYQGAHKRDELKGADVDWLIAERPGKVRA
LKKHPRKNKVAIHIEYLKASIRAKVEHPFRIIKCQFGFIKARYKGLMKND
NQLAMLFTLANLVKVDQLIRRQARSA
>gid:32001  VCA0493  IS1004 transposase
MGDYRSSSHVYWRCKYHIVWTPKFRFKILKGNVAKELNRSIYILCNMKDC
EVLELNVQPGHVHLVAIIPPKVSISTLMGVLKGRSAIRLFNKFPHIRKKL
WGNHFWARGYFVDTVGVNEEIIRRYVRHQDKKELEQEQQLELLRD
>gid:32015  VCA0507  transposase OrfAB, subunit A
MISSPHKLTGDIMTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVG
KSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILK
KATALLMSDSLNNS
>gid:32016  VCA0508  transposase OrfAB, subunit B
MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEA
HAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRK
ASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFAR
KVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQ
LLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEI
TRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
>gid:32028  VCA0520  exonuclease SbcD, putative
MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIY
DRSIPPTAAIDLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKN
SGLHIFADFEQMMQPLVLHSPQAGEVAFWGMPYHDPELVRHYYHNDITTH
DAAHQFLCESILAQRNPSQRHVLISHCFVDGAMESESERPLSIGGSDRVD
HRHFLPFDYVALGHLHQPQMKGAEHIRYSGSLMKYSFGEQHQNKGATLVE
LGQQGFISATHIPLIAPHQMRIIEGELEAILAAGATDPQADDYLLVRLLD
KHAILDPMEKLRQVYPNVLHLEKPGMLIGVDQEMGKARLARGELDMFRDF
FLEAKREPLSEQQEKVVIEVIARLKAEGI
>gid:32029  VCA0521  exonuclease SbcC, putative
MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICY
ALYGETTGSERTGDQMRCDYAAPESLTEVIFEFELAGARYQITRQPDQEI
PKKRGEGMTKKSHSATLVALKSDGNELIANKPNPVAKAVVELMGLDVKQF
RQVMVLPQGKFRELLTANSKEREQIFGQLFQTQLYSQIERALFERAAGIR
KEKEEFDQQIKGTLSVVGLESEEQLQTELTELAPVLTHAQSQLKAEQQQW
DETKAHYQAALELEQQFIRKQQLVVEIATHQEQATHIEMLRQQRQQAQKA
ARLTAVHQQWHQAQKNLQQAKLKVEQQQTLLQQAKAQQQQAQQASQQASL
ACEEVPKLNEQRITWQRAEQKLLAQENVQQAVAKAERELQLATQNALNLQ
QASEKLEQELQNQRLEWEQQQRQLTRLEVQKARMNQLVQQVQAREREQSL
LNELQTAQQALLRFEQQHHHIQTQAEQAKLTADKLEFAWHTQRAAELALA
LTQNEPCPVCGSLEHPNKAQYSGDVVTKVQVEQARQQQQDWVQRQQEAFH
AWQQQGFKTEQIAQNLTTLSSELTLQQVALLNELIEQQQILHSDIAALQQ
LNPDLLKRQIEEGEQRLAHTKMTLEKQNQNQQQAWQTLAQLQAELASLRQ
EIPPELSDLDTLRSAIGRVQNQIEILQKAEHTAREQWVQAQKQFASVQAA
YQAAIEAHRESQRQQEETTSAWQQGLLHSGFSDESAYLAARLTDEAIVNI
ERQIAQYEERSAMLSGEQQALSRKLAEKNRPELEPLLVKVTQAEEKMALA
LQAFTQHQSRMDGLQRVAKQLADLYQKNRALEAEYQVVGTLSDIANGKTG
AKVSLHRFVLGVLLDDVLLQASQRLMKMSRGRYLLKRKEERAKGNVGSGL
DLMVEDSYSGKWRDVATLSGGESFMAALSLALGLSDVVQAYSGGIRLDTL
FIDEGFGSLDPESLDLAIQTLIDLQQGGRTIGIISHVTELKEQIGLRLDV
LATRMGSTLRLIT
>gid:32051  VCA0544  conserved hypothetical protein
MGPGEESKEQPMHLERIEIAGFRGIRRLSLTFDEITTLIGENTWGKSSLL
DALSVVLPADGTLYPFTLQDFHVDYSIADAQTQNLQIILVFAANDLHEPK
AGRYRKLKPLWQTDEQGAQKIIYRISASRVKYDISTQYAFLDLEGNSLTL
HHSEKLAQELMSLHPVIRLKDSRRFEKSLANGNGKNARVEKRISNTWRRL
MATPGHVNKGEIRSSLSAMNSLVEHYFSFKSQSRKNPRRERDSLLYAASP
SEKSLSQIIHETKNKQTKLLLLGLLNAYLQGKGPKELRRCARPILIIEDP
EGRLHPTHLARAWSFLDLLPMQKILTTNSSDLLGAVPLHSIRRLVRKSDR
TIATSVSQRSLSRDELRRIGFHIRFHRSGALFARCWLLVEGETEVWLFNE
LAHQCGYNLAAEGVHIIEFAQSGLKSLIKVARAFGIDWHVVTDGDPAGKK
YSATVRGLLGHDQERHRLTELPDRDIEHFLYSHGFEYFFKELVKIPHDHP
IPAKKVVSKVLKKHAKPDLALAIVSHCESNGTECIPVLLRWTLKRVITMA
NGNT
>gid:32100  VCA0592  MutT/nudix family protein
MLASLKTVGKGEPMKPLYVAIHPDIKPLNQQRIMQRKAARAIAMRGERIL
LLYTERYHDYSLPGGGLESNEDVLMGMIRELQEETGAQNVRNIQPFGLYQ
EFRPWHKQQEADVIHMVSYCYCCEVDEKLGQTQLENYEQRNGMKPMWVNI
HEAIAHNEQTLLNDSRKGMSIERETYLLRLIAKTLH
>gid:32139  VCA0632  MutT/nudix family protein
MSVEKTEPVEKTPTRLPVAECVSFLLVKEGSCLLERRSATKASDPNIIAI
PGGHIEAGENQAQALQREVQEELGVDATRSVYLCSLYHPTEFELQLLHYY
VVDQWQGEIACHEADEVFWTPIAPSAVETIADKIAIQEFQRLYPRYLAL
>gid:32222  VCA0717  helicase IV
MIADNFVSGLLPMQLNANKTAQFFIANEYYQVQLEKEWLVLTSLSSEERI
PFHVWNGEVQIRRGVFWGTLQFFAHPEEGVQRSWLVQGLPWPECRHFAHQ
LVAHYQAWHNRQCEQLSLYFPRWQQELSRLKRLPSFLSHSSVEAWVAQVY
ADLKLMDMTLHEAQKHLPTVFDTLLPWLLDTSATLYERNKAWLEIERANW
TVLFSQCESSPLNVSQQYAVLLNDDHNLVLAGAGSGKTSVLTARVSYLLQ
SHLAKPEQILLVAFARDAAQEMAERLKNKIGLEAERLHINTFHQLGLRII
NRVEGKTVIMSPLANDSKLKQAWCIDWLKRHWMTPTNFKRWQKHLAKWPI
AYLAGDDELGSHVENPKLIAWLEKQLDQLAQMGLSKKELQERLVDHDDYP
RLNSELSLCWPCYQAWQQMLKDQNQIDFNIMITRATEYVEKGKFRSPWKF
IMVDEYQDISPQRLRLLQALCEQNQGQCNLFAVGDDWQSIYQFAGSDVDL
TTGFASRFAHSTVHHLDTTYRFNDQIGAVANRFIQQNPHQLPKTLNSFKT
QKQKAVMLAPNHSVEKILDEINRSTNKLKTVLLLGRNHYHKPELLKDWQN
RYLSLKLDFMTCHASKGKEADYVIILAVDEGQFPARVKALHLDDALNQSE
DDFPYAEERRLFYVALTRAKEKVWVTYNGNGSSFVQELLNDDYPVVKQK
>gid:32244  VCA0739  conserved hypothetical protein
MENLAELPSPWFVYLVRCANNALYCGITTDVSRRFAQHQKGRGAKALRGK
GPLELVWSLPVADGKSAALKLEYRIKALSKSQKEALVAGMARIDQLEIIF
Q
>gid:32271  VCA0764  MutT/nudix family protein
MTPSSPLYFDKTHSMSKIIHQWKSIALVEEDVLLPNGHSVTHTTISHPGA
AVILPLTDQGEIVVIRQFRPSLKKWLLELPAGTIEEGEPPLSCAQRELEE
ETGFSAQQFIELGQVTPLAGFCDEIQHLFVAKNLSKTARYSCDEDEVIEV
LFLTPQELERKIVFGDITDSKTIACLSKAKLCGYL
>gid:32275  VCA0768  ATP-dependent RNA helicase, DEAD box family
MSELSITFSQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGA
QTGTGKTAAFGLPLIQRFIEQPWQREANSKEIRALVLVPTRELAQQVLDS
LQAYAKGTELKIVAVYGGTSMKVQLNHLRGGVDILIATPGRLLDHAHVKS
LFLGKVEVLVLDEADRMLDMGFMPDLQRVLRRLSPLRQTLFFSATFDSKI
KAVAYRIMRDPIEVQVTPSNSTAETVQQMVYPVDKKRKRELLSYLIGSKN
WQQVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAG
KVRALIATDVAARGLDIAQLEQVVNYDMPFKAEDYVHRIGRTGRAGLAGL
AVSLLSHDEQPQLEAIERLLNTRLPQEWLKGFEPSPVVHEENSPRRSAGR
SSEKRKLKAQLKIHAQRGKKAR
>gid:32297  VCA0790  hypothetical protein
MTHQENLSNPQEVNKKVTKRSHYDSLSLSVFSSNPINPDCRNGINPHIRD
TQKIYFTTLKKHNTFYLRVSQRAKQAQRAKQAHREHLKNESVTVSLRTES
RREAKMRSDYLKDRLLEQAGSFIDFNHMRETLKEIAKAELLRRPKVDWFY
RGNIIVAQEALQEAQTVEQVRFIQSYSDIMKKGLQSDTEGLLSIIDSVDS
EQSKHSEPQDHKEHKEHKESLTIDELIDNYIADKISSGEWMESTKEKKGA
KLQHLKTIFEACSLKDKPIDKLTRNDLLEVRTALINRGLKTLTVNGYMQD
IRAIFNNAEALGLIGKSPAVKLNIKDRDIKEPKALTESEVIALIDYFKHG
YFTEARRSKKTLEGMKYLKWVPQIAAVTGARLNEILQLRKGDIRQSANGL
CWYIDINDRGDNVVKNKSSNRIVPLVDGAYGFDLELFLSEIVNTCNEDSD
NIFRLVVVN
>gid:32298  VCA0791  transposase OrfAB, subunit B
MIIKKLKQSHSVKILCEVFNVHRSSYHYWLKRPALINAETIKLRSLISEA
HAASNGSAGARTIADIVTNQGVKLSRYRATKLMRTLGLVSCQEPKHRYRK
ASQEHIDVPNHLSRQFAVTAPNEVWAGDVTYIWTGNRWMYLAVVIDLFAR
KVIGWSMSLSPDSRLTGKALSMAYESRGKPKGVMFHSDQGSHYTSRKYRQ
LLWRFQIKQSLSRRGNCWDNAPIERFFRSLKTEWVPTVGYRSFAEAQQEI
TRYIIGYYCQLRPHQYNGGLTPNESERLYWENSKTVANFS
>gid:32299  VCA0792  transposase OrfAB, subunit A
MISSPHKLTGDIMTKRTRRLFSAEFKLEAAQLVLDQNYSVTEAAQAMNVG
KSTMDKWVRQLREERQGKTPKASPMTPEQIEIRELKKKLARLEEHNEILK
KATALLMSDSLNNS
>gid:32302  VCA0795  resolvase, putative
MFINTIDNKEHIIHYEHILKSTHTVNEVNTVSEVDAMKYSLIKLSAMNSY
SDCQQAIEDIEADPENYTTETRAAARIGGHCELLKGAKEKIKALEKKADS
FIPSDDSEEVNTVSETSQRTYGYGRVSTDEQTTSQQLTAIREAGHKVSDN
RFIVDEGVSGGVCAMERPAFRNLVENKLEKGDTLVIAKLDRLGRDNIDVQ
QVVQMLTDKGIKLFILDLPVADLSSPEGKLMLQMFATFAEFEKNRISERI
RDKLKQLKQEGKALGRPTKNVYDDVQELKAQGISQRTIADKLNVSLSTVR
RNWVDTKRSLEVVTESGQ
>gid:32311  VCA0804  ATP-dependent RNA helicase DeaD
MVGNGKARGTLVISSFSGIPMQDTAIQFSDLALNSAILSALTEMGFVSPT
PIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLLNKLNLSQYKPQAIVM
APTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASILDQMRALKSGAHIVV
GTPGRVKDLITRDRLHLDECHTFILDEADEMLKMGFVDDVTWIMEQAPES
AQRVLFSATMPPMVKEIVERFLRNPECVDVAGSNQTVAKVEQQYWVVKGV
EKDEAMARLLETEETDASIVFVRTRQDTERLADWLCARGFKAAALHGDIP
QSLRERTVDHIKQGVIDILVATDVVARGLDVPRITHVYNYDIPFDVESYI
HRIGRTGRAGRKGKAILLVRTNQIRMLRTIERVTRSSMEEIQLPHRDKVA
ESRLTKLGQELAADKEFSSLERFADLVEKLQASLEIDATTLAAILLKRQQ
GKRPLFYVGADPMIEAMEREKSRRRERRDDRRDGDRPARREFGGRDQENH
DWDTYQLQVGRDQGVQVKDIVGALANELGLTKGSIGAIKLAQGHTFVQLP
KAMSNDVSSKLRKLRIRQKEVGAVVCDFDDFRESRGGARREGGPRREGGR
RPEGNREGGFRGGREGGREGGRGRGGEGRPFREGERRFERNRSGESSGSY
RGERGHSRRREEA
>gid:32385  VCA0878  integrase-related protein
MITHANVNVSYLAQQMGHADITMVARVYGKWLVESNKKESERVWQELEKV
RNQ
>gid:32387  VCA0880  hypothetical protein
MKKIEILIVVDCAGALATTSLISNVYLIDSNQWLGSWDEGTCQLHTVSED
GQFICWRSCAISPDDEVNITGFYGDMIDQKACLPSPVNDAWEGRVQTRGD
TGRYLYTISLSINGITMNFSPYLEVQ
>gid:32466  VCA0961  hypothetical protein
MMKKLFLDTHSASGEIKLTDGLLYWFPQFLTPIQADQAFQQMLTHLDWQQ
KSIRLFGKSVLQPRLIAWYGEKGYRYSGLSLSAQPFPPPLLTLKTQCEQA
AQAPFNSVLANLYRDGQDSMGWHQDNEPELGSNPVIASLSLGESRRFLLR
HHKDHALQVECELNHGDLLIMAGNTQHFWQHAIPKTRQTKQTRINLTFRN
IL
>gid:32495  VCA0990  ATP-dependent RNA helicase, DEAD box family
MIKSTPAIIRPTLFFEYSGIQPMSFSSLALSADLIQALPKAITEPSAIQT
LVIPAMLTGKDVFALANTGSGKTLAYGLPLLERLKTSPEQQALVLVPTRE
LAMQVSEVLTHVGTALGLNTLCLCGGVDKTEQQNALAENPNILVATTGRL
FDLTQSGLRLNRVTTLVLDEADRLLDMGFWPQVQALASQTAGVRQTVMCS
ATFSDDLKLKAQQLMRAPTQVSANPENSINQAVQETLYLVNKGSKTQALV
ALLKQHQWPQVLVFIGAKENADSLTKKLNKAGIVATVLHGDKSQSEREAA
LAEFKNGTTQVLIATDLLARGIHIELLPVVINFELPMHAETYVHRVGRTA
RAGQHGIALSLVCHGEMDALNATRTLTQRELPVQNLEGFPVTDQPSTGES
KRAPRDKQANRRTQNKKSVKQFQGKSRT
>gid:32522  VCA1017  methylated-DNA--protein-cysteineS-methyltransferase
MSHFTDYSSPLGPMTLQASSQGLLGVWFATQTTQPEHLGDYVKECPILNK
TIRQLDEYFSGQRTQFELPLAASGTAFQQSVWHALCKIPYGEIWSYQQLA
EAIGNPKAVRAVGLANGKNPISIIVPCHRVVGKNGQLTGYAGGLERKAFL
LELEKRR
>gid:32587  VCA1085  conserved hypothetical protein
MWKEILELTPDRQKVIAKLGAQGAAKELNRSELPMVLAQIGAGKLFILDE
EVTRFINCVKESKRAAFEGIVIAEVRNATVSVVLGEKEMLASMVVTGAYG
GRGLRGNELVHALAQASVLKGINKLALKKVLLVSGQLKPGEVFTQPVARG
KEPIQGRDTQFVPLVEDVSKRVLRPQQKAGENKLDMRNLGETITVGENDP
VMRRLPATKGEMGYTVQGKPIPPKPGKESALVAGKGTHISPNDPNLLLAS
QAGMPLIKKNTIEVDSALCLNHVSVATGHIRFKGNVVIAGDIEPGMIVRA
TGSITVGGFIESANVQAQGDIDVGKGIIGHMVTDDEERSCVVKSGGSIRA
NYAQYVELQAADSIHLGVHSIGNIIRCGNDLTVLDSKMTQGTLSAGNAKV
GGKVLCFNLGVEGDTATHVEAFARYQSYKERINKHKELYKQAQDTTMALI
RREIEFKKRPKAERSDEEAQEIETAKADASTQMEKIKLALDMLNEEFEQQ
LLENTVEAKNKVFTHVTIQFGDEKVLTKREHGASIFKFNQYEIKLSSLLE
AEDIGI