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2024-05-03 15:00:22

Gene list

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COG category: Replication, recombination and repair
Organism: Corynebacterium diphtheriae NCTC 13129, NCTC 13129

Number of genes found: 154

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Corynebacterium diphtheriae NCTC 13129, NCTC 13129
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA DIP1526 Putative transposasechromosome CDS1547640 813 + 0.521525
NA DIP2033 Putative transposasechromosome CDS2085350 132 - 0.530303
NA DIP0333 Putative DNA polymerase III, delta' subunitchromosome CDS304045 1266 + 0.629542
NA DIP0037 Conserved hypothetical proteinchromosome CDS37736 915 + 0.485246
NA DIP1023 SNF2/RAD54 family proteinchromosome CDS999109 3090 + 0.518447
NA DIP0049 Putative transposase (partial)chromosome CDS42736 234 + 0.491453
NA DIP1185 Conserved hypothetical proteinchromosome CDS1183899 639 + 0.466354
NA DIP1138 Putative DNA methylasechromosome CDS1124164 579 + 0.500864
NA DIP0026 Putative transposase (partial)chromosome CDS25519 234 - 0.521368
NA DIP1239 Putative helicasechromosome CDS1240851 2793 - 0.499105
NA DIP1026 Conserved hypothetical ATP-binding proteinchromosome CDS1004173 2565 + 0.4846
NA DIP1324 Putative primosomal proteinchromosome CDS1335564 2028 - 0.4857
NA DIP1251 Conserved hypothetical proteinchromosome CDS1254942 867 + 0.476355
NA DIP2074 Putative tranposasechromosome CDS2127573 309 + 0.543689
NA DIP1025 Putative exonuclease, SbcD-familychromosome CDS1003052 1122 + 0.513369
NA DIP0722 Putative ATP-dependent DNA helicasechromosome CDS692220 3183 + 0.526233
NA DIP0077 Hypothetical proteinchromosome CDS66921 801 + 0.55181
NA DIP1055 Conserved hypothetical proteinchromosome CDS1036006 690 + 0.498551
NA DIP1713 Putative DNA-repair related proteinchromosome CDS1750120 729 - 0.540466
NA DIP1351 Conserved hypothetical protein (putative ATP/GTP binding protein)chromosome CDS1365030 1371 - 0.474836
NA DIP0242 Putative IS element transposasechromosome CDS206740 312 - 0.423077
NA DIP2047 Putative exonucleasechromosome CDS2093716 708 + 0.59322
NA DIP1543 Putative formamidopyrimidine-DNA glycosylasechromosome CDS1569776 891 - 0.485971
NA DIP0047 Putative transposase (pseudogene)chromosome CDS41066 1549 - 0.557134
NA DIP1804 Putative single-strand binding proteinchromosome CDS1852795 489 - 0.580777
NA DIP1212 Putative RNA helicasechromosome CDS1213407 1359 - 0.509198
NA DIP0843 Putative transposasechromosome CDS820987 1377 - 0.48947
NA DIP1837 Putative phage integrasechromosome CDS1880040 816 - 0.584559
NA DIP0757A IS element transposase (partial)chromosome CDS736323 231 - 0.528139
NA DIP0723 Putative helicasechromosome CDS695396 3231 + 0.518415
NA DIP2083 Putative transposase for insertion elementchromosome CDS2135858 1209 + 0.535153
NA DIP1980 Putative DNA repair proteinchromosome CDS2027764 888 + 0.591216
NA DIP0337 Putative phage integrasechromosome CDS306912 459 - 0.53159
NA DIP1859 DeaD/DeaH family helicasechromosome CDS1901706 1950 + 0.539487
NA DIP0829 Putative endonucleasechromosome CDS804836 807 + 0.536555
NA DIP1895 Putative DNA methylasechromosome CDS1947027 1842 - 0.565147
NA DIP0068 Hypothetical proteinchromosome CDS60895 309 - 0.598706
NA DIP1771 Putative membrane proteinchromosome CDS1815992 630 - 0.579365
NA DIP0873 Conserved hypothetical proteinchromosome CDS847895 855 + 0.528655
NA DIP1513 Conserved hypothetical proteinchromosome CDS1537574 528 - 0.471591
NA DIP0435 Putative insertion element DNA-binding proteinchromosome CDS398891 483 - 0.540373
NA DIP1016 Putative helicasechromosome CDS989756 3132 - 0.445722
NA DIP0828 Putative DNA repair proteinchromosome CDS804154 552 - 0.570652
NA DIP1511 Conserved hypothetical proteinchromosome CDS1534889 1152 - 0.499132
NA DIP2085 Putative insertion elementchromosome CDS2138047 483 + 0.496894
NA DIP1956 Hypothetical proteinchromosome CDS2007058 438 - 0.547945
NA DIP0343 Hypothetical proteinchromosome CDS308897 525 + 0.430476
NA DIP2265 Conserved hypothetical proteinchromosome CDS2357845 711 + 0.490858
NA DIP1423 Putative ATP-dependent helicasechromosome CDS1441388 3954 + 0.472939
NA DIP0434 Putative transposasechromosome CDS398031 813 - 0.527675
NA DIP2053 Putative protein kinasechromosome CDS2100295 2163 + 0.606103
NA DIP0758 Putative transposase (partial)chromosome CDS736810 339 + 0.634218
NA DIP1110 Conserved hypothetical proteinchromosome CDS1094680 180 + 0.505556
NA DIP1896 Putative transposase (partial)chromosome CDS1949307 171 + 0.549708
NA DIP1349 Conserved hypothetical proteinchromosome CDS1361421 552 - 0.461957
NA DIP0725 Putative hydrolasechromosome CDS699791 684 + 0.535088
NA DIP1650 Hypothetical proteinchromosome CDS1683094 324 - 0.512346
NA DIP1808 Putative insertion element DNA-binding proteinchromosome CDS1858313 483 + 0.540373
NA DIP1664 Conserved hypothetical proteinchromosome CDS1700446 537 - 0.540037
NA DIP1525 Putative insertion element DNA-binding proteinchromosome CDS1547110 483 + 0.540373
NA DIP2371 Putative conserved integral membrane proteinchromosome CDS2476084 3330 + 0.567868
NA DIP0772 Putative ATP-dependent DNA helicasechromosome CDS750488 1665 - 0.590991
NA DIP1963 possible transposasechromosome CDS2010331 1452 + 0.489669
NA DIP0306 Conserved hypothetical proteinchromosome CDS273265 738 + 0.577236
NA DIP1947 integrasechromosome CDS1998829 666 - 0.599099
NA DIP1017 Putative NUDIX-family hydrolasechromosome CDS992898 396 - 0.477273
NA DIP0131 Putative ATP-dependent helicasechromosome CDS110238 2346 - 0.617647
NA DIP1408 Conserved hypothetical proteinchromosome CDS1425515 1710 - 0.491228
NA DIP1068 Putative NUDIX/MutT-family hydrolasechromosome CDS1049093 810 + 0.537037
NA DIP0264 Putative helicasechromosome CDS226618 1122 - 0.581996
NA DIP1573 Putative DNA polymerase III epsilon subunitchromosome CDS1600226 1347 + 0.519673
NA DIP0817 Putative phage integrasechromosome CDS790953 1065 + 0.644131
NA DIP1769 Conserved hypothetical proteinchromosome CDS1813394 975 - 0.585641
NA DIP1897 Putative transposase (partial)chromosome CDS1949524 330 + 0.478788
NA DIP0151 Conserved hypothetical proteinchromosome CDS122552 306 + 0.624183
NA DIP0757 IS element transposase (partial)chromosome CDS736001 267 - 0.546816
NA DIP2369 Conserved hypothetical proteinchromosome CDS2472392 873 + 0.586483
NA DIP0752 IS element transposasechromosome CDS727618 1380 + 0.489855
NA DIP2295 Conserved hypothetical proteinchromosome CDS2392713 363 - 0.5427
NA DIP1019 Putative exported proteinchromosome CDS995636 411 + 0.53528
NA DIP1517 Putative transposasechromosome CDS1540598 813 - 0.521525
NA DIP1445 Conserved hypothetical proteinchromosome CDS1464212 1329 + 0.51392
NA DIP1894 Hypothetical proteinchromosome CDS1944430 2598 - 0.523865
NA DIP0604 Conserved hypothetical proteinchromosome CDS570425 1527 + 0.538965
NA DIP0113 Putative riboflavin biosynthesis proteinchromosome CDS93040 1341 + 0.619687
NA DIP1510 Putative integrase/recombinasechromosome CDS1533714 909 - 0.484048
NA DIP2304 Putative DNA repair glycosylasechromosome CDS2399933 855 + 0.584795
NA DIP1355 Conserved hypothetical proteinchromosome CDS1370802 2655 - 0.460264
NA DIP1177 Conserved hypothetical proteinchromosome CDS1175639 1077 + 0.506964
NA DIP2214 Conserved hypothetical proteinchromosome CDS2304729 960 + 0.453125
NA DIP0598 Putative membrane proteinchromosome CDS565332 1134 - 0.537919
NA DIP0133 Putative DNA repair proteinchromosome CDS113144 741 + 0.596491
NA DIP2124 Putative insertion element DNA-binding proteinchromosome CDS2176673 483 - 0.544513
NA DIP2123 Putative transposasechromosome CDS2175813 813 - 0.519065
NA DIP0805 Putative DNA methylasechromosome CDS783728 2004 - 0.585828
NA DIP1076 Putative DNA polymerasechromosome CDS1057910 705 - 0.479433
NA DIP0182 Putative phage integrasechromosome CDS155600 1227 - 0.546047
NA DIP0349 Putative alkylated DNA repair proteinchromosome CDS311422 699 + 0.608011
NA DIP1809 Putative transposasechromosome CDS1858843 813 + 0.517835
NA DIP1487 Putative DNA repair related proteinchromosome CDS1508539 510 - 0.496078
NA DIP1366 Putative transposasechromosome CDS1382700 1380 + 0.489855
NA DIP0134 Putative DNA-repair proteinchromosome CDS113937 588 + 0.581633
NA DIP0612 Putative DNA polymerasechromosome CDS579083 3120 + 0.538782
NA DIP0633 Putative exodeoxyribonucleasechromosome CDS604219 906 + 0.53532
NA DIP0717 Putative ATP-dependent RNA helicasechromosome CDS688659 1311 - 0.559878
NA DIP0336 Conserved hypothetical proteinchromosome CDS306606 210 - 0.542857
NA DIP1418 Putative helicasechromosome CDS1435342 2535 + 0.469428
NA DIP1518 Putative insertion element DNA-binding proteinchromosome CDS1541458 483 - 0.540373
NA DIP1988 Hypothetical proteinchromosome CDS2037819 981 + 0.595311
NA DIP0764 Putative transposasechromosome CDS740277 1314 - 0.592846
NA DIP1955 Putative transposasechromosome CDS2006198 810 - 0.51358
NA DIP1615 Putative serine/threonine protein kinasechromosome CDS1647084 2193 + 0.543548
NA DIP1266 Putative transposasechromosome CDS1273380 1380 + 0.489855
NA DIP0346 Putative IS element tranposase (partial)chromosome CDS309772 162 + 0.5
deaD DIP1018 DEAD-box helicasechromosome CDS993506 2043 + 0.573177
dinB DIP1588 DNA polymerase IVchromosome CDS1615746 1356 - 0.532448
dnaA DIP0001 chromosomal replication initiator proteinchromosome CDS19 1659 + 0.535865
dnaB DIP2288 Replicative DNA helicasechromosome CDS2384785 1521 - 0.552268
dnaE DIP1580 DNA polymerase III alpha subunitchromosome CDS1606336 3561 - 0.506038
dnaG DIP1699 DNA primasechromosome CDS1736085 1899 - 0.532912
dnaN DIP0002 DNA polymerase III, beta chainchromosome CDS2286 1218 + 0.570608
dnaX DIP0259 DNA polymerase III subunit gamma/tauchromosome CDS221399 2124 + 0.621469
gyrA DIP0009 DNA gyrase subunit Achromosome CDS8792 2571 + 0.610657
gyrB DIP0005 DNA gyrase subunit Bchromosome CDS5379 2058 + 0.568513
ligA DIP1077 DNA ligasechromosome CDS1058711 2034 + 0.514749
mfd DIP0911 transcription-repair coupling factorchromosome CDS883472 3795 + 0.552833
nth DIP0304 endonuclease IIIchromosome CDS271954 756 + 0.562169
pcrA DIP0835 ATP-dependent DNA helicasechromosome CDS811671 2418 + 0.504963
pknA DIP0054 probable serine/threonine-protein kinasechromosome CDS45712 1506 - 0.609562
polA DIP1146 DNA polymerase Ichromosome CDS1129828 2700 + 0.491481
recA DIP1450 Recombinase Achromosome CDS1469776 1119 - 0.467382
recF DIP0003 DNA replication and repair proteinchromosome CDS3542 1194 + 0.542714
recG DIP1136 ATP-dependent DNA helicasechromosome CDS1121804 2115 + 0.570213
recN DIP1182 DNA repair proteinchromosome CDS1179859 1740 + 0.496552
recR DIP0261 recombination proteinchromosome CDS223919 657 + 0.590563
rnhB DIP1515 ribonuclease HIIchromosome CDS1538491 690 - 0.498551
ruvA DIP1376 holliday junction DNA-helicasechromosome CDS1394044 612 - 0.49183
ruvB DIP1375 holliday junction DNA-helicasechromosome CDS1392938 1089 - 0.500459
ruvC DIP1377 crossover junction endodeoxyribonucleasechromosome CDS1394694 492 - 0.526423
ssb1 DIP2290 single-strand DNA binding proteinchromosome CDS2387462 582 - 0.609966
ssb2 DIP2216 single-strand DNA binding proteinchromosome CDS2307893 516 + 0.54845
tnpA1 DIP0766 transposase Achromosome CDS742372 303 - 0.485149
tnpA2 DIP1944 transposasechromosome CDS1998063 795 + 0.611321
tnpA3 DIP1951 transposasechromosome CDS2001551 795 + 0.611321
topA DIP0327 DNA topoisomerase Ichromosome CDS293451 2895 + 0.6
ung DIP1134 uracil-DNA glycosylasechromosome CDS1119460 669 + 0.572496
uvrA DIP1159 excinuclease ABC subunit Achromosome CDS1149234 2862 + 0.480084
uvrA2 DIP2031 Putative excinuclease ABC subunit A2chromosome CDS2081863 2592 + 0.51196
uvrB DIP1154 excinuclease ABC subunit Bchromosome CDS1142204 2046 + 0.477028
uvrC DIP1314 Putative excinuclease ABC subunit Cchromosome CDS1325463 2064 - 0.46657
uvrD DIP0726 Putative DNA helicase IIchromosome CDS700467 2052 + 0.54191
xerD DIP1186 integrase/recombinasechromosome CDS1184540 936 + 0.45406
xseA DIP0942 Exodeoxyribonuclease VII large subunitchromosome CDS912814 1242 - 0.559581
xseB DIP0941 Exodeoxyribonuclease VII small subunitchromosome CDS912528 258 - 0.515504