TitleGenColors Logo
spacer
Home spacerGenomes
spacerMethods
spacerDocumentation spacerContactspacer spacerLeibniz FLI
spacer
QuickSearch
2024-05-19 03:13:20

Gene list

Applied filters:

COG category: Replication, recombination and repair
Organism: Vibrio vulnificus YJ016, YJ016

Number of genes found: 245

Free access
Sort by:

 

Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Vibrio vulnificus YJ016, YJ016
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
VV0011 chromosomal DNA replication initiator DnaAchromosome I CDS7450 1407 + 0.496802
VV0012 DNA polymerase III, beta chainchromosome I CDS8917 1101 + 0.506812
VV0013 Recombinational DNA repair ATPasechromosome I CDS10027 1080 + 0.464815
VV0014 DNA gyrase, subunit Bchromosome I CDS11125 2418 + 0.492142
VV0040 ATP-dependent DNA helicase Repchromosome I CDS46389 2019 + 0.490342
VV0054 conserved hypothetical proteinchromosome I CDS64970 1335 - 0.510861
VV0089 site-specific recombinase XerCchromosome I CDS99962 969 + 0.529412
VV0111 N6-adenine-specific methylasechromosome I CDS119437 594 - 0.498316
VV0130 MutL proteinchromosome I CDS136670 1407 + 0.390192
VV0132 conserved hypothetical proteinchromosome I CDS140561 2178 + 0.378788
VV0144 conserved hypothetical proteinchromosome I CDS154392 1383 + 0.396963
VV0152 transposase and inactivated derivativechromosome I CDS159838 390 + 0.405128
VV0172 transposase and inactivated derivativechromosome I CDS183740 456 + 0.414474
VV0173 transposase and inactivated derivativechromosome I CDS184257 534 + 0.460674
VV0184 Mg-dependent DNasechromosome I CDS193292 771 - 0.464332
VV0186 DNA polymerase Ichromosome I CDS195994 2874 + 0.477383
VV0192 conserved hypothetical proteinchromosome I CDS203029 489 + 0.466258
VV0226 MutT/nudix family proteinchromosome I CDS236504 555 - 0.482883
VV0239 RecG-like helicasechromosome I CDS247209 2082 - 0.534582
VV0263 conserved hypothetical proteinchromosome I CDS272561 1749 + 0.535735
VV0277 site-specific recombinase, phage integrase familychromosome I CDS287569 1305 - 0.498084
VV0285 DNA repair proteinchromosome I CDS296776 675 + 0.477037
VV0289 formamidopyrimidine-DNA glycosylasechromosome I CDS298883 885 + 0.487006
VV0297 putative KDO kinase WavCchromosome I CDS305882 711 + 0.459916
VV0331 hypothetical proteinchromosome I CDS340797 438 - 0.479452
VV0351 putative GDP-mannose mannosylhydrolasechromosome I CDS359606 483 + 0.364389
VV0369 transposasechromosome I CDS378217 1533 + 0.493803
VV0370 putative transposase subunitchromosome I CDS379667 834 + 0.485611
VV0371 predicted endonucleasechromosome I CDS381021 300 + 0.396667
VV0516 ribonuclease HIchromosome I CDS503675 438 + 0.456621
VV0525 DNA repair proteinchromosome I CDS508471 474 - 0.495781
VV0545 putative transposasechromosome I CDS532848 231 - 0.454545
VV0546 putative transposasechromosome I CDS533252 888 - 0.441441
VV0549 conserved hypothetical proteinchromosome I CDS534852 378 + 0.415344
VV0558 putative transposase Achromosome I CDS540196 276 + 0.402174
VV0559 putative transposase Bchromosome I CDS540468 426 + 0.424883
VV0560 phage integrasechromosome I CDS540909 1230 - 0.418699
VV0562 DNA primasechromosome I CDS544499 1797 - 0.479132
VV0584 MutT/nudix family proteinchromosome I CDS568170 648 + 0.46142
VV0588 topoisomerase IV, subunit Bchromosome I CDS570938 1881 + 0.50505
VV0589 topoisomerase IV, subunit Achromosome I CDS572822 2286 + 0.496063
VV0603 predicted endonucleasechromosome I CDS586107 369 - 0.428184
VV0622 NTP pyrophosphohydrolasechromosome I CDS610155 402 + 0.445274
VV0626 hypothetical proteinchromosome I CDS616450 420 - 0.414286
VV0654 endonuclease IVchromosome I CDS650641 882 + 0.456916
VV0655 uracil DNA glycosylasechromosome I CDS651800 705 + 0.465248
VV0660 DNA and RNA helicasechromosome I CDS656526 1326 - 0.499246
VV0665 site-specific recombinase XerDchromosome I CDS660986 924 + 0.485931
VV0667 single-stranded DNA-specific exonucleasechromosome I CDS662773 1740 + 0.508046
VV0674 DNA mismatch repair proteinchromosome I CDS671196 750 - 0.473333
VV0675 MutT/nudix family proteinchromosome I CDS672498 519 + 0.441233
VV0711 transposase and inactivated derivativechromosome I CDS710041 1338 - 0.458894
VV0722 DNA recombination-dependent growth factor Cchromosome I CDS725690 915 - 0.459016
VV0773 conserved hypothetical proteinchromosome I CDS778708 231 + 0.445887
VV0774 exonuclease VII, large subunitchromosome I CDS778971 1386 - 0.480519
VV0799 hypothetical proteinchromosome I CDS804352 678 - 0.376106
VV0806 ribonuclease HIchromosome I CDS810680 537 + 0.446927
VV0809 DNA repair proteinchromosome I CDS812421 498 - 0.504016
VV0817 phage integrasechromosome I CDS821652 1251 - 0.452438
VV0822 DNA repair protein RecNchromosome I CDS825521 1140 - 0.457895
VV0823 DNA repair protein RecNchromosome I CDS826666 519 - 0.477842
VV0870 exonuclease VII small subunitchromosome I CDS874701 243 - 0.44856
VV0883 5'-3' exonucleasechromosome I CDS883698 780 - 0.483333
VV0909 DNA polymerase III, delta subunitchromosome I CDS911298 1026 - 0.44347
VV0982 NAD-dependent DNA ligasechromosome I CDS980812 2010 + 0.485572
VV1019 SeqA proteinchromosome I CDS1017007 534 + 0.426966
VV1048 Rad3-related DNA helicasechromosome I CDS1050972 1920 + 0.492188
VV1107 bacterial nucleoid DNA-binding proteinchromosome I CDS1115115 294 + 0.459184
VV1109 DNA uptake proteinchromosome I CDS1117577 303 + 0.382838
VV1138 predicted methylated DNA-protein cysteine methyltransferasechromosome I CDS1147521 309 - 0.440129
VV1155 topoisomerase IAchromosome I CDS1168119 1971 + 0.509386
VV1182 ribonuclease Tchromosome I CDS1198821 654 - 0.48318
VV1186 EndoIII-related endonucleasechromosome I CDS1201556 642 - 0.475078
VV1193 excinuclease ABC subunit Bchromosome I CDS1209387 2043 + 0.474792
VV1232 DNA polymerase elongation subunitchromosome I CDS1243722 2370 - 0.47384
VV1234 nuclease subunit of the excinuclease complexchromosome I CDS1247094 1833 + 0.463721
VV1247 DNA gyrase, subunit Achromosome I CDS1264566 2703 + 0.487976
VV1281 DNA polymerase III, delta prime subunitchromosome I CDS1300879 957 + 0.456635
VV1282 Mg-dependent DNasechromosome I CDS1301826 768 + 0.440104
VV1294 DNA polymerase III, alpha subunitchromosome I CDS1313481 3075 - 0.473171
VV1295 uncharacterized protein conserved in bacteriachromosome I CDS1316571 1404 - 0.460114
VV1296 conserved hypothetical proteinchromosome I CDS1317971 684 - 0.476608
VV1301 bacterial nucleoid DNA-binding proteinchromosome I CDS1323624 282 + 0.457447
VV1315 transposase and inactivated derivativechromosome I CDS1340362 1338 - 0.458146
VV1317 conserved hypothetical proteinchromosome I CDS1342675 765 - 0.419608
VV1324 putative ATPase proteinchromosome I CDS1351662 1350 + 0.49037
VV1369 hypothetical proteinchromosome I CDS1392383 1386 + 0.453824
VV1398 3-methyladenine DNA glycosylasechromosome I CDS1423051 570 + 0.468421
VV1425 DNA or RNA helicasechromosome I CDS1450705 1743 - 0.485944
VV1465 HrpA-like helicasechromosome I CDS1501416 2346 + 0.514919
VV1469 conserved hypothetical proteinchromosome I CDS1506753 393 - 0.452926
VV1472 exonuclease Ichromosome I CDS1508555 1422 - 0.484529
VV1501 Zn-finger domain associated with topoisomerase type Ichromosome I CDS1534044 666 + 0.430931
VV1575 transposase and inactivated derivativechromosome I CDS1618577 1338 - 0.459641
VV1634 ATP-dependent DNA ligasechromosome I CDS1680173 843 + 0.487544
VV1724 conserved hypothetical proteinchromosome I CDS1780349 345 - 0.423188
VV1738 iSSod13, transposasechromosome I CDS1791851 1041 + 0.445725
VV1747 transposase and inactivated derivativechromosome I CDS1798028 852 - 0.478873
VV1748 transposase and inactivated derivativechromosome I CDS1798876 309 - 0.508091
VV1754 NTP pyrophosphohydrolasechromosome I CDS1803496 408 - 0.42402
VV1770 hypothetical proteinchromosome I CDS1815327 2274 + 0.332014
VV1771 retron-type reverse transcriptasechromosome I CDS1817712 1146 + 0.322862
VV1777 integrasechromosome I CDS1822239 1209 - 0.476427
VV1786 NTP pyrophosphohydrolasechromosome I CDS1828918 408 - 0.416667
VV1788 transposase and inactivated derivativechromosome I CDS1830490 852 - 0.478873
VV1789 transposase and inactivated derivativechromosome I CDS1831338 309 - 0.508091
VV1824 conserved hypothetical proteinchromosome I CDS1850999 498 - 0.437751
VV1832 transposase and inactivated derivativechromosome I CDS1855453 852 - 0.478873
VV1833 transposase and inactivated derivativechromosome I CDS1856301 309 - 0.508091
VV1839 transposase and inactivated derivativechromosome I CDS1859037 309 + 0.508091
VV1840 transposase and inactivated derivativechromosome I CDS1859342 852 + 0.478873
VV1842 iSSod13, transposasechromosome I CDS1860447 1041 - 0.445725
VV1868 transposase and inactivated derivativechromosome I CDS1879234 852 - 0.478873
VV1869 transposase and inactivated derivativechromosome I CDS1880082 309 - 0.508091
VV1920 transposase and inactivated derivativechromosome I CDS1912991 1017 + 0.453294
VV1921 putative microtubule binding proteinchromosome I CDS1914040 1395 - 0.405018
VV1941 super-integron integrase IntIAchromosome I CDS1929942 963 + 0.413292
VV1957 conserved hypothetical proteinchromosome I CDS1949380 696 + 0.41954
VV1966 integration host factor, alpha subunitchromosome I CDS1957533 288 - 0.440972
VV1995 ATP-dependent helicase HrpAchromosome I CDS1991898 3837 - 0.488663
VV2021 conserved hypothetical proteinchromosome I CDS2017408 531 - 0.450094
VV2028 conserved hypothetical proteinchromosome I CDS2025653 705 + 0.483688
VV2047 conserved hypothetical proteinchromosome I CDS2049905 555 + 0.4
VV2082 guanylate cyclase-related proteinchromosome I CDS2088519 558 - 0.46595
VV2083 MutT/nudix family proteinchromosome I CDS2089144 627 + 0.45614
VV2101 DNA polymerase III, epsilon subunitchromosome I CDS2108016 717 + 0.502092
VV2110 transposase and inactivated derivativechromosome I CDS2118969 1338 - 0.457399
VV2155 conserved hypothetical proteinchromosome I CDS2168876 1758 + 0.476109
VV2163 hypothetical proteinchromosome I CDS2174448 333 + 0.438438
VV2191 iSSod13, transposasechromosome I CDS2198851 1041 + 0.445725
VV2210 hypothetical proteinchromosome I CDS2220890 3243 - 0.434474
VV2216 phage family integrasechromosome I CDS2233868 225 - 0.417778
VV2229 transposase and inactivated derivativechromosome I CDS2249576 849 - 0.451119
VV2230 probable transposasechromosome I CDS2250414 282 - 0.443262
VV2235 transposase and inactivated derivativechromosome I CDS2256801 1338 + 0.461136
VV2239 hypothetical proteinchromosome I CDS2261696 1047 - 0.389685
VV2251 DNA repair proteinchromosome I CDS2272819 555 + 0.49009
VV2254 ribonuclease HIchromosome I CDS2274547 537 - 0.467412
VV2262 phage integrasechromosome I CDS2280454 1233 - 0.444444
VV2284 holliday junction resolvasome, helicase subunitchromosome I CDS2299827 1005 - 0.487562
VV2285 holliday junction resolvasome, DNA-binding subunitchromosome I CDS2300853 621 - 0.47504
VV2287 crossover junction endodeoxyribonuclease RuvCchromosome I CDS2303113 522 - 0.5
VV2314 DNA topoisomerase Ichromosome I CDS2334069 2625 - 0.470095
VV2317 transposase and inactivated derivativechromosome I CDS2337553 1338 - 0.458894
VV2329 ATP-dependent helicase, DinG familychromosome I CDS2351617 2112 + 0.458807
VV2331 primosomal replication protein N''chromosome I CDS2354553 546 + 0.459707
VV2334 exodeoxyribonuclease IIIchromosome I CDS2357661 807 + 0.467162
VV2365 transcription-repair coupling factorchromosome I CDS2393284 3462 + 0.500289
VV2409 Recombinational DNA repair proteinchromosome I CDS2439865 603 - 0.512438
VV2411 DNA polymerase III, subunits gamma and tauchromosome I CDS2440890 2193 - 0.509348
VV2456 conserved hypothetical proteinchromosome I CDS2490247 501 - 0.469062
VV2529 DNA polymerase III, epsilon subunitchromosome I CDS2559272 732 - 0.502732
VV2530 ribonuclease HIchromosome I CDS2560072 468 + 0.485043
VV2541 DNA polymerase III, alpha subunitchromosome I CDS2568588 3480 - 0.491667
VV2543 ribonuclease HIIchromosome I CDS2572181 624 - 0.491987
VV2580 DNA helicasechromosome I CDS2607619 2115 + 0.478487
VV2581 DNA-damage-inducible protein Pchromosome I CDS2609765 1077 - 0.472609
VV2613 ATP-dependent exoDNAse alpha subunitchromosome I CDS2636012 2115 - 0.52104
VV2614 ATP-dependent exoDNAse beta subunitchromosome I CDS2638123 3666 - 0.516367
VV2615 exonuclease V gamma subunitchromosome I CDS2642053 3489 - 0.501576
VV2681 Mg-dependent DNasechromosome I CDS2719985 840 - 0.463095
VV2687 DNA polymerase III, psi subunitchromosome I CDS2726628 417 - 0.460432
VV2757 ATP-dependent helicase HrpBchromosome I CDS2809622 2463 - 0.516037
VV2805 RecA recombinasechromosome I CDS2863509 1110 - 0.467568
VV2806 mismatch repair ATPasechromosome I CDS2865186 2655 + 0.495292
VV2829 Recombinational DNA repair proteinchromosome I CDS2889445 732 - 0.498634
VV2866 endonuclease Ichromosome I CDS2922278 696 + 0.475575
VV2870 uncharacterized protein conserved in bacteriachromosome I CDS2925424 423 + 0.482269
VV2881 putative DNA glycosylasechromosome I CDS2932846 627 - 0.526316
VV2884 A/G-specific adenine glycosylasechromosome I CDS2935458 1053 + 0.48623
VV2908 DNA polymerase III, chi subunitchromosome I CDS2968406 450 + 0.464444
VV2925 RNA polymerase-associated protein HepAchromosome I CDS2983798 2910 - 0.515464
VV2953 single-stranded DNA-binding proteinchromosome I CDS3019042 540 - 0.522222
VV2956 excinuclease ATPase subunitchromosome I CDS3021692 2859 + 0.487233
VV2979 replicative DNA helicasechromosome I CDS3056522 1488 - 0.489919
VV2983 primosomal replication protein Nchromosome I CDS3059663 303 - 0.455446
VV2986 site-specific DNA methylasechromosome I CDS3061400 828 - 0.454106
VV3012 primosomal protein N'chromosome I CDS3092601 2220 + 0.486486
VV3073 DNA mismatch repair enzymechromosome I CDS3154187 1995 - 0.494236
VV3091 transposase and inactivated derivativechromosome I CDS3173627 1326 + 0.458522
VV3132 DNA polymerase III, epsilon subunitchromosome I CDS3215134 642 + 0.515576
VV3139 factor-for-inversion stimulation proteinchromosome I CDS3222672 297 + 0.410774
VV3145 bacterial nucleoid DNA-binding proteinchromosome I CDS3229355 306 - 0.434641
VV3149 uracil-DNA glycosylasechromosome I CDS3232621 594 + 0.491582
VV3155 MutT/nudix family proteinchromosome I CDS3236048 735 - 0.480272
VV3173 predicted transposasechromosome I CDS3256807 282 + 0.429078
VV3174 transposase and inactivated derivativechromosome I CDS3257114 534 + 0.462547
VV3176 iSSod13, transposasechromosome I CDS3263697 1041 - 0.445725
VV3183 ATP-dependent RNA helicase RhlBchromosome I CDS3270781 1308 + 0.492355
VV3187 ATP-dependent DNA helicase RecQchromosome I CDS3274926 1878 - 0.509585
VV3191 DNA helicase IIchromosome I CDS3280176 2175 - 0.516782
VV3211 transposase and inactivated derivativechromosome I CDS3298657 492 + 0.410569
VV3212 conserved hypothetical proteinchromosome I CDS3299174 288 + 0.493056
VV3220 transposase and inactivated derivativechromosome I CDS3310605 1338 - 0.458894
VV3221 DNA topoisomerase I-related proteinchromosome I CDS3312055 696 - 0.472701
VV3223 Smf proteinchromosome I CDS3313130 1104 - 0.506341
VVA0035 adenosine deaminasechromosome II CDS32684 1446 + 0.493084
VVA0037 methylated DNA-protein cysteine methyltransferasechromosome II CDS34131 486 + 0.5
VVA0152 conserved hypothetical proteinchromosome II CDS174260 1443 + 0.390159
VVA0153 hypothetical proteinchromosome II CDS175927 918 + 0.470588
VVA0242 endonuclease Ichromosome II CDS279202 1632 - 0.498774
VVA0256 transposase and inactivated derivativechromosome II CDS294548 1338 - 0.458894
VVA0313 RelB proteinchromosome II CDS350458 444 + 0.418919
VVA0353 conserved hypothetical proteinchromosome II CDS411964 1524 - 0.468504
VVA0357 deoxyribodipyrimidine photolyasechromosome II CDS416362 1416 + 0.509887
VVA0360 DNA and RNA helicasechromosome II CDS419351 1344 + 0.469494
VVA0455 alkylated DNA repair proteinchromosome II CDS519584 612 - 0.498366
VVA0499 MutT/nudix family proteinchromosome II CDS566926 519 + 0.468208
VVA0513 hypothetical proteinchromosome II CDS581742 936 + 0.446581
VVA0562 MutT/nudix family proteinchromosome II CDS633714 516 - 0.46124
VVA0586 DNA repair exonucleasechromosome II CDS659163 1134 + 0.474427
VVA0587 putative exonuclease SbcCchromosome II CDS660305 3066 + 0.4788
VVA0615 MutT/nudix family proteinchromosome II CDS689196 456 - 0.449561
VVA0626 conserved hypothetical proteinchromosome II CDS696556 309 - 0.443366
VVA0629 DNA and RNA helicasechromosome II CDS699689 2073 + 0.472745
VVA0646 DNA and RNA helicasechromosome II CDS720329 1380 - 0.476812
VVA0657 DNA and RNA helicasechromosome II CDS740601 1926 + 0.490654
VVA0688 hypothetical proteinchromosome II CDS777369 555 + 0.403604
VVA0731 DNA and RNA helicasechromosome II CDS832042 1257 + 0.472554
VVA0741 predicted ATP-dependent endonucleasechromosome II CDS840188 1632 - 0.470588
VVA0792 vpf402 homologuechromosome II CDS890981 1296 + 0.445988
VVA0800 vpf402 homologuechromosome II CDS895342 1296 + 0.445988
VVA0846 conserved hypothetical proteinchromosome II CDS949501 1080 - 0.508333
VVA0857 phage integrasechromosome II CDS957874 1179 - 0.497031
VVA0886 phage integrasechromosome II CDS974238 1269 - 0.42238
VVA0939 DNA and RNA helicasechromosome II CDS1033259 1338 - 0.480568
VVA0996 conserved hypothetical proteinchromosome II CDS1110336 2169 + 0.437068
VVA1159 DNA and RNA helicasechromosome II CDS1284553 1530 + 0.511111
VVA1224 predicted endonucleasechromosome II CDS1346166 297 - 0.457912
VVA1405 DNA polymerase III, epsilon subunitchromosome II CDS1556404 720 + 0.484722
VVA1413 iSSod13, transposasechromosome II CDS1567284 1041 - 0.445725
VVA1421 MutT/nudix family proteinchromosome II CDS1576434 537 + 0.472998
VVA1445 conserved hypothetical proteinchromosome II CDS1596700 531 + 0.444444
VVA1457 DNA and RNA helicasechromosome II CDS1604317 1209 + 0.46402
VVA1495 DNA polymerase III, alpha subunitchromosome II CDS1645096 615 + 0.502439
VVA1536 hypothetical proteinchromosome II CDS1681789 2220 - 0.424775
VVA1540 hypothetical proteinchromosome II CDS1687476 603 - 0.495854
VVA1544 hypothetical proteinchromosome II CDS1691704 2073 + 0.47371
VVA1545 hypothetical proteinchromosome II CDS1693746 315 + 0.511111
VVA1546 conserved hypothetical proteinchromosome II CDS1694069 279 + 0.455197
VVA1570 putative integrasechromosome II CDS1716251 891 + 0.461279
VVA1587 DNA and RNA helicasechromosome II CDS1729873 1311 - 0.50267
VVA1680 predicted polymerasechromosome II CDS1837308 1674 - 0.51135
VVP25 putative conjugative transfer protein TraIpYJ016 CDS21699 5775 + 0.466494
VVP57 putative site-specific recombinasepYJ016 CDS39988 672 - 0.438988