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# Xylella fastidiosa 9a5c

>XF2437 integration host factor, beta subunit
MDRSRWFYLDRFRCQVIFCLLPMTKSELIEILTKRQAHLKSDDVDLAVKS
LLEMMGGALSEGDRIEIRGFGSFSLHYRPPRCGRNPKTGESVALPGKYVP
HFKPGKELRERVASVVPLAECGDITE
>XF0660 exodeoxyribonuclease small subunit
MPKHSPPDTSPVARFEQSLQELEQLVQNMETGALSLEQSLGAYERGIALY
RECHQALEQAQLRVRLLSDPMHPDDGEPFDPSLVSTSQ
>XF0482 single-stranded DNA binding protein
MARGINKVILVGNLGNEPEIKYTQSGMTITSISLATSSGRKDREGNPQER
TEWHRVKFFGKLGEIAGDYLHKGSQCYIEGTIRYDKFTGNDGQERYVTEI
IADQMHMLGSRNEGSSGITPQRRPAKARNNDKAYAYAGDDFHDDDPPF
>XF1299 DNA repair system specific for alkylated DNA
MLGGFVMDLFPFLPGARISLQSGWLPSGAADALLAGLLEGVPWEVHRIHI
FGREVNSPRLSCWVGDPQASYRYSGRCFQPRPWWPALAALRMCLEGETGV
VFNSVLLNRYRHGGDAIGWHSDDEAELGIDPLIASLSLGASRRFVFRHRR
ERHLRAECVLSHGDLLLMGGRTQRDYQHALPRTLRVVGERVNLTFRRILM
>XF0967 excinuclease ABC subunit B
MTGLFQLVSSYSPSGDQPTAVQKLVTNFHAGIAKQVLLGVTGSGKTYTIA
NVVEQIQKPTLVMAPNKTLAAQLYGEFKAFFPHNAVEYFVSYYDYYQPEA
YVPASDTFIEKDSSINEYIEQMRLAATKALLSRSDVLVVATVSAIYGLGA
PEDYLSLRLILSLGEHIEQRQLIRHLTELQYTRNELDLVRGSFRVRGEVV
DVFPAESEMEALRIELFDGEIESLSLFDPLTGQTVRKLQRYSVYPKTHYA
TTRERTLSAVDTIKDELKEYLELLYGRNKLVEAQRLAQRTQFDLEMMAEV
GYCNGIENYSRHLTGKAPGEPPPTLFDYLPPDALLVIDESHVTIPQIGAM
FKGDRSRKETLVEFGFRLPSALDNRPLRFEEWEVRSPRSIYVSATPGSYE
FRESAGEVIELLVRPTGLIDPEIEIRPVATQVDDLISQINVCIKLGDRVL
VTTLTKRMAENLTEYLSEQGIRIRYLHSEIDTVERVEIIRDLRLGKFDVL
VGINLLREGLDMPEVSLVAILDADKEGFLRSTSSLIQTIGRAARSVRGRA
ILYADKVTRSMRAAIDETERRRQKQKEYNAENGIVPKSVVRPISDILEGA
RDGVEVKSKGKGRRVDEVPADYCALNQAEIAAQMKVLEQQMYQHARDLEF
EDAARIRDQIQRLREAGLG
>XF0001 chromosomal replication initiator
MESWSRCLERLETEFPPEDVHTWLRPLQADQRGDSVVLYAPNPFIIELVE
ERYLGRLRELLSYFSGIREVVLAIGSRPKTTELPVPVDTTGRLSSTVPFN
GNLDTHYNFDNFVEGRSNQLARAAAWQAAQKPGDRTHNPLLLYGGTGLGK
THLMFAAGNVMRQVNPTYKVMYLRSEQFFSAMIRALQDKSMDQFKRQFHQ
IDALLIDDIQFFAGKDRTQEEFFHTFNALFDGKQQIILTCDRYPREVNGL
EPRLKSRLAWGLSVAIDPPDFETRAAIVLAKARERGATIPDEVAFLIAKK
MHSNVRDLEGALNTLVARANFTGRAVTIEFSQETLRDLLRAQQQTIGIPN
IQKIVADYYGLQIKDLLSKRRTRSLARPRQLAMALAKELTEHSLPEIGDA
FAGRDHTTVLHACRQIKLLMETETKLREDWDKLMRKFSE
>XF2651 conserved hypothetical protein
MVASVAVFPIVAGVRCWFPVWVDDVRFFVSCAKGLEYLLVDEVLALGAVG
ATATVAGVNVEGGLCDAQRLVLWSRLASRVLWPLAAFACADEDALYAGVA
ALPWVEHVLPGQTLAVDAHVSGEAITHARYAAQRVKDAVVDTLRDAGVVR
PSVDVEHPDVRLNLSLRKGRATLSVDLGGRALHHRGWRQAPHAASLKEHL
AAAVLLRAGWAKVYAEGGGLLDPMCGSGTLLIEGALMVADVAPGLSRYAD
PDAISHVSVAERPVLLPSRWRGFDVVAWEALVVDAQQRARRGLAELRPVL
HGSDIDPRALGAAFANARAAGVQDAIEFVVAGIDVLPAVFEPHGVVVCNA
PYDVRLAANPGLYRHLGDALRRVVPRWRAALVCGSSPLAFATGLRAGKKY
QFFNGALECVLIVCDPVVPLAREAGGAQALSEGAQMVANRLRKNVQRLKK
WRMRAGVECYRVYDADLPEYAAAIDVYQEVDGARRLFLHVQEYAAPASIP
EGDVRRRRHELLAAVRAVFDVSVAQVALKTRQRGKGGSQYGCFAQRGEFF
HVCEHGALLRVNLFDYLDTGLFLDHRPLRARMAREAVGKRFLNVFCYTGV
ASVEAAVAGAAATTSVDLSSTYLHWCTDNFALNGQGGVRHRLVQADALAW
LEAERGQYDVIFCDPPTFSNSARADDFDVQRDHVRLLRAAVARLTPGGVL
YFSNNFRRFRLDVDAVAAFAQCEEISPVTIDLDFSRNTRIHRTWLLWR
>XF1905 holliday junction resolvase, endodeoxyribonuclease
MLIAMDTLHLCLNCSSIIDHCVLMSSRIAYQMTRILGIDPGSQRTGVGVI
DVDEYGCSRHVYHAPLVLLGQSSFAGRLKQLLLGLSAVIEEYSPKEVAIE
KVFMSKNADSALKLGQARGVAISAVVLRDLPVHEYAARQIKLAVVGRGGA
DKQQIQHMVGVMLNLQGRLQSDAADALAVAITHAHVSATAQRLGVSTKQA
WSRK
>XF0882 ATP-dependent helicase
MPGPPLHCSTLLRPLSSRHDAPHACFSRALTVAMSLLSRASIEALSDGGL
LARRLDNFVPRPGQQRLTAAIGEIFEQRNILLAEAGTGTGKTFAYLVPTL
LSGLKTIISTGTRALQEQLYHRDLPRVRAALGVDLRSALLKGRTNYVCKY
RLEQTCAAPHLGTAEQTTQLQRILTWSGHTQFGDMAELDTLPDDSPLLPL
VTSTLDNCLGKDCPFWNECFVVQARQRAQAADVVVVNHHLLLADLALKQE
GFGEILPGAQAFIIDEAHQLPALAANFFGESFGMRPLQELGRDCMIEARS
VAGAQAALQHSVWQLEQALRTLRAAMEGLPSRGTQSRLLAKPEVCEGFET
LITALTSLHSLLVPLRSAAAGLDACAARAQEALSRLLRWLGETAETSGFE
GDPPPNNDVLWYELTQRSFRCQRTPMDVSAQLQAHRETSMAAWVFTSATL
AVDGTFEHIARRLGLNHPMTLLQPSPFDWVRQALCYLPPGLPNPATHGFG
VALIEALIPVLEASSGRAFLLFASHRALREAATALRGGPWPLFVQGDAPR
ATLLDRFRVSGNGLLLGSASFREGVDVAGGALSVVVIDKLPFTAPDDPVF
EARLEAIRQEGGNPFFDEQLPQAVIALKQGVGRLIRSESDRGVLVLCDPR
LLSKSYGRIFLDSLPSFPQTRNIAEVRAFFNGSNTAPTESRHDSPTSHRE
ASGVHRIG
>XF0170 formamidopyrimidine DNA glycosylase
MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWDIPSHIESRLPGHRI
TTVCRRAKYLLIDTNAGGSLIIHLGMSGTLRLLAPETPLRPHDHVDIMLN
NRRVLRFNDPRRFGCLLWQEDGQIHPLLQRLGCEPLSDSFNGDYLYQCSR
ARNVSVKTFLMDQRIVVGVGNIYAAESLFRAGISPLCEADKISLQRYRRL
AEVVKDILLYAINRGGTTLRDFLSPDGRPGYFKQELFVYGRQQQPCKQCG
SLLRQTTIRQRTTVWCGHCQG
>XF2303 transposase
MQAPPGRTTPDDPIFLSASLRVLLLKSFCRLHYPANIIAQCVSWYLAYAL
ILRNVEEMMAERGIAVDHYTLHRWVIRLVPLLDMAFRRHKRPVGSHWRMD
ETYIKIKGQWKYLYRAVDTAEQTIDFLLTARRDAVAALHFFHKAIRHHGE
PEVVTMDKSGTNASALTALNADKPDQEAIQLISGKAST
>XF2158 ribonuclease H
MESMKSINAYTDGSCLGNPGPGGWAVLLRYKNNEKELVGGELDTTNNRME
LMAAIMALERLSEPCQIKLHTDSQYVRQGITEWMSGWVRRGWKTAAGDPV
KNRDLWERLCAATQRHMVEWCWVKAHNGDSDNERVDVLARGQAMAQRSTV
ASR
>XF1904 holliday junction binding protein, DNA helicase
MIGRLRGVLTSKTPPWLVVDVCGVGYELEVPMSTFYELPNVGYEVNLFTH
YTQKDDSAALYGFLSESERRLFRHLQRVSGIGTKIALAVLSSVSVDTFAG
LIQAGDVNALTVIPGIGKKTAERMLVELRDRAADFNNGISTSGKLNLDTV
SEAALALQQLGYKPAEAARMARDAGTESDDVASVIKKALQAALR
>XF1804 site-specific DNA-methyltransferase
MAKKLPLPIPYQGSKRMLAPMIYPLLPSDVVSFYEPFAGSAAMTLFVAHH
GVTKRYVLGDTLEPIVDLWASIIEQTSKTAKRYSQVWHGQTTTSTDYFNR
VRERYNNEKDPVDLLYLVCRCVKSAVRFNGGGWFTQSHDKRRLGMAPDKM
SLAIEGASALLRGKTKSRKGGWLEITSDATARDFVYMDPPYMGTSMGRDK
RYHQQLMLDDLVAGLEAMNARDIRFALSYDGMTGKKEYGPELPATLGMAR
LLLHAGRSSHATLQGKVEKTIESLYLTIKCFDRQKDLSQVLGL
>XF2692 uracil-DNA glycosylase
MNSMNEQGEAINNSAESRIQLESSWKAHVGNWLLRPEMRDLSAFLRARKV
AGVSVYPPGSQIFAAFEATPFQRVKAVILGQDPYHGQGQAHGLCFSVRPG
MPLPPSLLNIYKELEEDLGLLRPDHGCLLPWAKRGVLLLNAVLTVEDGRA
GAHQGKGWEGFTDHVVDTLNREREGLVFMLWGSYAQAKGKVIDTRRHLVL
KAAHPSPLSAHRGFLGCRHFSLCNQYLSQHGLGMVDWSLPPCIALDGAIL
NGRIAV
>XF0680 phage-related protein
MNLRPYQHTMVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDIAPI
LVIAPLRVAATTWPDEVAKFPHLRHLRVSVVVGSAAARRHALEQDADIYC
INYDNLKWLAEFYGDRWPFRMVVADECSKLKGFRLRQGTRRARALAKHVH
TKVERYIGLTGTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRVVQ
IGSDPHAVRLVPTPNASKEMQDKIRDLCLSLDPQAYFDLRQPIVNTIRVA
LPAHAQRLYKAMEQEMFIALECGAEVEAFNAASKTIKCLQLANGALYTDD
TRQAWEVVHDAKLEALHEIIEEAAGMPVLVAYHFKSDVTRLQRAFPKGRV
LDQHPDTIRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIVERIGPTRQAQAGHDRPVFIHHIVAANTVDELVMARRESKREVQDL
LLEAVKRSETCKPLTSQGVITL
>XF0969 hypothetical protein
MYNTASQTLRDAMVPRLPTGERPGDVLAMDERHMVDGALEVYQAKTGAKV
AMTEDYLRKHKGGRVTST
>XF1353 topoisomerase IV subunit
MTDLTRPSFHGFEQMPLREYAERAYLDYSMYVVLDRALPFIGDGLKPVQR
RIIYAMHELRLNPKAKPKKSVRAVGDVIGKYHPHGDLACYEALVLMAQPF
SYRYPLIEGQGNFGSSDDPKSFAAMRYTESKLTPISEILLSELSEGTVNW
ITNFDGTLEEPAWLPSRLPHLLLNGTTGIAVGMATDVPPHNLNEIASALI
HLLDNPNATIAALCQYIRGPDYPTAAEIITPPSDLQNLYETGNGSVRTRA
TYHKEDGNVVITSLPYQVSPSKVIEQIAQQIRSKKLPWLDGEGVRDESDH
KNPVRIVLFPRSQRIDVEQLMGHLFATTDLEKSHRVNLNVIGLDGRPQVK
PLKQLLSEWLSFRSDTVTHRLKYRLQKVESRLHLLEGLLIAFLNLDKVIH
IIRNEDEPKPVLIARFGLSDAQTEYILDTKLRQLARLEEMAIRNEQDALT
KERDEINVILDSDIQLKKLIKDELLADAKTFGDARRAPLVARQAAQAIDE
SELVASEPMTVVLSEKGWIRAAKGHEVDPSGMSYREGDRLLAAVRTRSTH
QVSFLDSEGRAYSTLVHTLPSARGNGEPLTGRFSPAPGASFQAMASADND
KLFVLASSHGYGFITRFENLTGRNKAGKTMIHLTPGAQVMGLAPLTDVRH
DRIVAVTSAGNLLAIAASELPELDKGKGNKLIDIPKTKLATERLVAVIAV
ASSHTLLLYSGERTMRLSFKDLEAYLDTRGSRGHLLPRGWQKIDTLDIQ
>XF0554 conserved hypothetical protein
MLNRRECGAAVEVAARRHLERAGLRWLASNVCFRGGELDLVMYDVMSVVF
VEVRYRQQENHGSAAQSVDRRKRRKLVMAAQLFLQRHPFLAQVPCRFDVV
EGAGRPLQLHWIRDAFRLDDC
>XF0631 phage-related integrase
MPKLTKNYIDKITAPADKEAFHWDDSLKGFGLRVTPTGKITYIVQGRVNG
SSPRISIGPHGVFTVDQARDVAREHLRSMRMGIDPRAVAKKEAAQRVTLR
DVADGYKRDRPLKDSSKAEIERHVTTTFEAWLKKPLRDITREMVTKRFNE
IKNHGLRGNGPAPAQANQAFAVLRALFNYAIREYREPDGSPVIRDNPVDV
LYKKWVPLKPRTSRVPDNKVGEVWSFLVEARKNAYNRDTWASIDVIMFMM
LTGLRIGEASALTWDRVNLEEEWFHLPDPKNSNPVWIPLSSQALELLKTR
PRVKGNPHVFPSWGKSGHIKDPRDFWKKVSEIAGVHLSNHAMRRTFTQIG
TAQCVIEKFRIDLLTNHKTKDVTVKHYLDTQHLEWLKPETQCISDWIEQQ
AAALNNRLEDSTV
>XF2297 DNA methylase
MAWSSQWLSECRRVTRPGGVLLVFTDWRMLPTLTDAVQSAGWAWQGIVVW
DKTPACRPQLGRFRSQAEFIVWASCGLMNPKAHPVTPVGVFPTGTAPREK
RHQVGKPLALMEHLIKIVPPASTILDPFAGSGTTGVAALRAGHRFIGMEM
SRFKYV
>XF0003 DNA replication and repair RecF protein
MHITQLVLRHFRCFDAVDFFPLPGLNFFIGENGSGKTSLLEAVHLMGYGR
SFRGRVRDGLIRHGSENLEIFVDWQETDLINARRRRAGLSHYGQEWIGRL
DGQKIMHLATLCAALAVITFESSSYQLINSNAELRRRFLDWGLFHVEPDF
LDLWRCYTHVLKQRNSLLKQKEELAMLEAWDQKLSEVGEQLTFRRFQYLE
RLKQRVIPLISRITPNLKIHGLNFNHGWRRHELPLIDALFISRERDYQYG
YTSLGPHRSDWTPQFASIPGVHVLSRGQGKLITLMCLLAQAQDFFDQRGE
WPILALDDLASELDQKHQWRVLEMLAEIPAQVLITGTEIPQGLKPYFSVG
AMFHVEHGAITRMF
>XF1190 histone-like protein
MNKTELIDGVAAAANLSKVEAGRAIDAVVNEITEALKKGDSVTLVGFGTF
QVRPRAERPGRNPKSGELIMIAASNNPSFKPGKALKDAVKCSAG
>XF2426 excinuclease ABC subunit A
MTALIRIRGARTHNLKNLDLDLPRNTLIVITGLSGSGKSSLAFDTIYAEG
QRRYVESLSAYARQFLSVMEKPDLDQIEGLSPAISIEQKSTSHNPRSTVG
TITEIYDYLRLLYARVGQPRCPDHHYPLEAQTVSQMVDHVLTLDPEQRYM
LLAPVVRERKGEHTQVFEQLRAQGFVRVRVDGELYEIDVVPTLTLRQKHT
IEAVIDRFRPREDIKQRLAESFETALKLGNGMASVQTLDTTTTTPHLFSS
KYSCPVCDYSLPELEPRLFSFNAPMGACPACNGLGVTEFFDPAKVVIHPD
LSLSAGAVRGWDRRNAYYFQLIASLAKHYTFDIDASWESLPEEIRHTILF
GSGDEQINFIYLTEAGGRTKRKHRFEGIVPNLERRYRETESAAVREELAK
YVSTRTCPECGGTRLNRAARNVFVADRTLPELTVLPINDALEFFKTLRLP
GWRGEIAIKIVKEIGERLGFLVDVGLDYLTLERKADTLSGGEAQRIRLAS
QIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLTRLRDLGNTVIVVEHDED
AIRQADHILDIGPGAGVHGGEICAQGSLEQIMAAPRSLTGQYLSGRRRIE
IPKQRHPPNATKMLHLRGACGNNLKGVNLDIPEGLFTCITGVSGSGKSTL
INDTLFTLAANEINGASHPIAPYASVDGLELFDKVVDIDQSPIGRTPRSN
PATYTGMFTPLRELFAQVPEARARGYSPGRFSFNVRGGRCEACEGDGLIK
VEMHFLPDVYVPCDVCHGKRYNRETLEIRYKGYNINDVLEMTVEDALKLF
EAVPAIARKLETLVDVGLSYLKLGQSATTLSGGEAQRVKLSKELSRRDTG
RTLYILDEPTTGLHFYDIEALLAVLHKLRDAGNTVIVIEHNLDVIKTADW
VIDLGPEGGGRGGEILVAGTPEAVAAHPHSHTGHFLAKLLPPKDVSNCGH
RDPGEEVDIAQTVHR
>XF1933 exodeoxyribonuclease III
MKMRIASWNVNSLNVRLSQLQQWLVEAAPDVLGLQETKLEDHQFPEAALA
ALGYVSVYAGQKTYNGVALLARVALEDVQVGIPGFEDVQRRVIAATVDGI
RVVNLYVVNGQEVGTEKYAYKLSWLDAVYHWLAEELQRYPRLVVLGDFNI
APDARDVYDPQVWNEDHILTSTTERVALGKLLGLGLHDGFRLHHQDTGIF
SWWDYRQASFRRNRGLRIDLTLVSEALRAQVVASGIDCVPRGWERPSDHA
PAWIELALAVSSSP
>XF0935 methyltransferase
MTKVQLAKRGRGVSPIYLDEDDQSKQSNIIYMRGRRRRRIVFGWYGGKFS
HLDWLLPLLPKCHHYCEPFAGSGAVLINRDAAQVETYNDIDGDVVNFFRV
LRDRNEELIRVIALTPFSREEYHRAIYGTKNGISDVERARRFYIKARQTR
TGLAQTASLGRWANCKDTSRAGMSGVVSRWLGGVDALDDIAQRLIRVQIE
NRPAVDVIRLYDSVNTLFYCDPPYLHVTRGDAKAYSFEMDEGQHREFAEV
VNECKAMVAVSGYEHPLMEELFKPERWFKTQGQEKTIHSTKGKRAEVLWT
NYDPQKQSQKG
>XF0678 phage-related integrase
MQERPGQIGKYWLSQRTGSKNWCRTWFDAATRQTNRASLGTTDIQEAKVR
LWEWYAKYGDISKQTPQDVVLDLVLTRYWQQHACNITSAESAKVALGYWS
DFFAGATVSEITPSRQREFVRWLQTGSDTPRSDGYIKRILTVGKAALNRA
YKEGEITSVPYIIPGKDAPPRDQVLSLQESAALWEAATLPHERMYLALAY
GTLARPEAILGLRREFADIQRRLLTQNPPGRKQTKKFRPVVPICDFLLPW
ILSVDRGPLVHWHGKPIASFKTAWRALRTHAGLPKDTVPKVIRHTMATEL
RSAGVAAQDIQGMLGHRAYGGTTDVYAKYRPDYMADAVRAIDAYMERLRV
SCVSVNKPQIAQPIDFIGGRCRVRTCDPCRVKAMLYR
>XF0760 DNA mismatch repair protein MutL
MPIRQLPEILINQIAAGEVVQRPASVVKELVENAIDAGATRVDIELEAAG
GRLIRIRDNGHGMAAQELPLAVLRHATSKIASLDDLEAVATLGFRGEALP
SIVSVSRFTLMSRRAMDEHGAVLQIEGGTLGEVIPHAHAPGTTVEVRDLF
YNVPARRKFLRAERTELGHIEEWARSLALAHPDLELRLSHNGKLSRRYKP
GDWYSDARLIEILGEDFAHQALRVDHSGAGLRLHGCIVQPHYSRSNTDQQ
YLYVNGRAVRDRSVAHAVKQAYSDVLYQGRHPAYVLFLELDPARVDVNVH
PAKQEVRFRDARLIHDFVYRTVQGTLAQTRAGTPPLAVGAGDVGGEGARP
PVRHAVSFSGRRGGASHVLGSYSASTAPLMQSAPSVSVADAPAAYAALYA
APPTQVIDAVPQMQTGLPLAAGAGDVPPLGYAIAQLHGIYILAECADGLI
VVDMHAAHERIGYERLKRAHDGIGLRTQPLLVPMTLMVAEREADVAECEA
ETLASLGFEVTRSGPGSLQVRSIPALLAQAEPEILLRDVLSDLSEHGHTR
RVAEARDTLLATMACHGAVRAQRRLSISEMNALLRDMEATERSGQCNHGR
PTWARFSLAEIDRWFLRGR
>XF0422 exodeoxyribonuclease V gamma chain
MSQMMVTTDFRLYHSNALDVLAGLLAETLRSPVPGQSLLVPDIILIPQAA
MRRWLQATLATTHGVVANLEFLTPGEFVARALDANLGAVPNALDTAVLHW
RLYAALCDPALLTQPALAELHAYLADGDLFKPWTLAEALSAAFEKYQAWR
CDWLLRWEAGADPDDPQAILWRHSVNGATHRARRIHDYLNRYGSGTEHPP
QGLPARLFIFATLNISPDVLRVLATQAQVGTLHFYLPTPTKEYWGDAQPF
TQRLHQPTDCVTQTGENRLLHAWGAAGRDFMTVLGSYEVVHPSGEITAYD
DPEQRLGTTLDEGGLRDSLLQRMHADLFHNRSAPVPAPLPAPRLEDPSLQ
FHACHTRLRELQVLHDRLRALLEPNSPEGQRFNPPLQPREIAVLAPDIDL
YIPYLEAVFGGHAHSDPLPYTLADASPLIDEPLAEVFLRLLDLPLSRFGL
HEILDLLAILPMATLAGFDTQTLESLRSWLTAAGARWGLDAAHRAEHQAP
ADDAYTWSFALDRLLLGHASGADADIAGVAAWPDLEGSMLTALDTLIRLL
RVLANTRQRLSEALLPTQWRERLLSLLDALLPDIPTAPSGIQRPLERLRR
LIDTFATDATRAGVALPVPAEVVRMHFAALLGDTDTRAPLLTGGISIGRM
VPMRLLPFRVICLLGMNDGDFPRRDPAAGLNRLTAELGTAQRRPGDRSRR
DDDCLLFLQLFSAAQDVFYVSYLGADPHDGSLREPSPLLTELLSTAVTYH
ADPSTAAKTLLLRHSLQPFSPTAFGADGDPRRFSYHPLWHAAAASIEGQR
HPLDPWCPRRLPALPDPEPALPLHSLRRFFSAPAEQFLQQRLGLRLPEPP
QTTDECDPLWLPSHGLERHRLDTLIFASLLHEADDTLYPQLRARALLPSG
PLGRQQLHERIEHLRPYAQAFAHWRGTAPPQSQYLEVMIDGIRLHAHIQD
LYPHGIARLRLGPPNGPAVLRHGLDWLLASAAGHPWPLVRFEDAGVAGLG
PHLQPSLPSSQAQTALSLLLRLRTAGLRQPLPFAPYSAWEYYTQRDTPER
ALQTARARWRGNDHQWGESNHAAIQLALRNHDPFATPQTAAHFAQLATLI
FDLLTTGQADPEPLTWLQLHP
>XF0676 DNA polymerase III, delta subunit
MNGVDCLGNSWMMSALTPWQQRAYDQMVAALDAGHLGHGLLLCGPEGLGQ
RAVALALADTVLGKGLTEVARQRCRKLITAGTHPDLQLVSFIPMKTADKL
RTEIVIEQIRDLSEKLVLTPQYGQAQVVIIDPADAINPAACNALLKTLEE
PASGCYLWLISPQPARLPVTIRSRCQRLEFKLPPLHEALAWLVAQGITEE
VAVEALDAARGHPGLAMQWLCDEGMVLRRTVAVELEQLASGQMSAVKLAQ
QWTADGKAEQRLYHAADLAFMQATAVLTDPSRLHKLATWFDAANRTRDLL
RTTVRADLAVIELLLAWCTRWGCRAECKEY
>XF0593 conserved hypothetical protein
MKSFAMRLKSLLLLFVLAFTVHAANKVDVNTASAEEMDRVLVNIGPSKAS
AIVKYREENGPFKSVEELALVKGIGMKTVERNRDLIEIGTRMAPAKHAKG
TELKSVGKR
>XF2081 DNA-damage-inducible protein
MAANQLVQARIDGAIKAEATVVLAAMGLTISDAVRLLLTKVAQDKALPFE
PLIPNATTIKAMREARAGKGETVTLGELRATIRAGN
>XF1326 DNA-3-methyladenine glycosidase
MAAYDHLYHCDPGLSGWMQRLGPLPALRGWRQPFNVVDALARAILFQQLS
GKAASTIVARIEAVIGSACLYAETLACIDDACLRTCGVSSNKILALRDLT
RREVAGELPSVRQMGSMHHNTIVEKLIPIRGIGRWTVEMMLMFRLGRPDV
LPVDDLGVRKGIQRVDSLAFVPTPKALCTRGECWAPYRTYAGLYLWRIAD
FHEGEGAVISDRSQDE
>XF1556 hypothetical protein
MMECKPTKTGAIPRFRVRPQKSGVVHYYYDHGGKPRKETPLGREPSSGGL
S
>XF1968 methyltransferase
MPSQYDYLDRDALIRLLQRRDAERQLGLVWERDEIEADAAVNDDYVALSL
DTELSHGAAPWPNLIIEGDNFDALRALRMTHRGAIRCIYIDPPYNTGNRD
FVYNDCFIDKTHRYRHSLWLEFMYRRLQLAKELLADDGVIFVSIDDNELF
RLGMLMDRVFGEQNFVANFIWNHRKSSQNDTDVSLAHNYTLCYARTRDRF
SLNPLPVDADKFNNTDGDQRGPWVADPFDAPNIRKNLTYPIKNPKTGKEF
LPPQGRHWRFTEDRYLEALKEGRIVFGKHGTGKPQYKRFLFEAAGKGKNI
FTIWNDVGTATEATKELMAIFDGEKMFNTPKPVSLIERILSVATDKEAWV
LDFFAGSGTTAHAVAKLNAEDGGHRRFILISNTEATQAQPDKNLCRDVCA
ERLRRVLGGYTNTKGQAVAGLGGGFAYLRAHRIPRHRLTMKLDHAEVWHA
LQLLHGKPLTPWPACGFTVDGESGDVLAYLADFRVSSITRLDAWLAGATV
GAMLYSWAPERLTERIGGLSCLPIPQYLRARFGR
>XF1912 hypothetical protein
MVTVLSVSPFLPSPSSASMRFLSLDACGRVLDWISWQDAACLYVRDAVSW
TLGDPCLSIHGGISRLTGQRSVIALHPIIASRGHAGTCVPVPTPALTNQA
LFARDDHLCLYCGQQFSRFQLTRDHVIPISKGGLDTWENVVTACFHCNSL
KANRTPQQAGMPLLAVPYRPSWIEHLILSNRNILADQMAFLKAQLPKRSK
LSRN
>XF1850 hypothetical protein
MPFHVQQDGRSRGEKKLGYAGLCKRLTAWRTDAPVHPLQQSLKDWGRAYA
NLFTKRADFPRFKKIRYRNSRNVLGTVKNVTVNQSCGKWYVSIQTADEIT
EPVHPSKLNVEIDADVTQLATQSDGTIYLPVNSFKSRQKSQISVRKDYLH
KVTTTISKNPTP
>XF1718 phage-related integrase
MALSDLTVRQARTTGKRYTLSDNDCLGLMVSAAGGKSWIFRYYWLGKQKR
MSLGGYPALSLREARAERDKAQALLARGIDPQIERDQRRHAAKLAGEYTF
KNVFDAWVEHRRKELKEGRQSTLSQILRIFNKDVLPTLGKMSIYDIRRPQ
LVGVVAAIEKRKAFTTAEKVRTWFNQMFRYALVIAEGLEVNPAADLDVVA
EPKPPVAHNPYLHLPELPEFLQKLRLYNPRGWQTQLGIRLLFLTGVRTGE
LRLAEPEQFDLDRGLWIIPPQVVKQLQDEMRKAGKRPQDVPPYIVPLSLQ
AIEIVRYLLGVMRPAQKYLLSHRSELKKRISENTINKALQLMGYEGRLTG
HGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMM
QDWADRLDLLEQGQVEAASAHLTIRIDGVPAMAEVEEAVGAVDAVDAAPT
VAEPAVPGVPPVVATPIVVTPNSGGITFQRLSQVPPPPVHAPEPEVSAIQ
REREEMLAIYESPNNLPVPLFGKLAGKSKDQINRELKAGKLLSISLGNRG
QRVPDWQLVPLKHRLVQVLMNQCPHADSWDLYRMLTQPHPDLGDRAAIDA
VTPANVPAIIRVIMGDYQQREDVPEVVAPRSIPDDVRLSVRRLVDSAVVL
EGA
>XF2311 excinuclease ABC subunit C
MQHHWNMTDNAPITFDGKRFAAHLSMAPGVYCMYAADDTLLYVGKAGALR
KRVASYFNGTPKNTRLTAMLAQVVRMDVTITRNEAEALLLENQLIKSLAP
RYNVLLRDDKSYPYVLLTREAWPRIALHRGPQIVPGRYFGPYPGVTAVRD
MLNLIHKLFKLRSCEDSVFRNRSRPCLQYQIGRCSAPCVNVVTHDNYTEA
VRRVTLFLEGKSDLLAEELIQAMQVASEHLEFEQAARLRDLLTSLRSMQN
RQYVDGRAADLDVLACAALSGHACVLLLSFRDGRNLGTRMFFPKTNGEER
TAEILSAFVSQYYAEYPPPPEILLDQEIPDHTLLEAAFSRSSAHKISLRW
NVRGERAGYVELAVRNAQVALSTELTSQRAQRVRSEAVRQLLGLEEPIKR
VECFDISHTMGEATVASCVVFDAVGPVRSQYRRYNITGITPGDDYAAMRQ
AIERRFRRAVEEDKQGERPDVLFIDGGAGQLAQAKMALNAVGVESVLLVG
VSKGEERRAGHETLIMLDGQELHPGAASPALQFIQQVRDEAHRFAITGHR
ARRQKTRMTSKLEDIPGIGSRRRANLLKHFGGLAGVKAAGQTEIARVEGI
STALAAKIYASLHGLSKSDAVNASRVS
>XF1555 phage-related protein
MTFRHVAERYRAEVIPTKAHNTQRMHHIYLNYLLQFFDDPPAPFESIKPV
NIRQYLDWRPFKVSANREVALFSHLWNWARSKGVTDLPNPCGGIRRNKER
GRDVYIDDTTYRAVYHAADQTLRDAMDLAYLTGQRVSDVVSMDERHIVNG
ALEICQAKTGVKLAIAITGELAVLIKRIFDHKRGLKLRSTRLIVDAKGLE
LSRTGLRYRFDKARVAAGIAKEVFQFRDDRQGRFGEGHPPSPSAIRACVG
DDDGALCTQAQRGEGHAYAVNCGALPILRSGHIF
>XF0252 ATP-dependent RNA helicase
MLSGVLMSNPSSTPLLFADLGLSDAVMQAVTKIGYETPSPIQAATIPALL
AGRDVLGQAQTGTGKTAAFALPLLTRTVLNQVKPQVLVLAPTRELAIQVA
EAFQRYAASISGFRVLPVYGGQSYGQQLAALKRGVHVIVGTPGRVIDHLE
RGTLDLSELKTLVLDEADEMLRMGFIEDVEEVLRKLPASRQVALFSATMP
PQIRRIAQTYLQDPIEVTIATKTTTAANIRQRYWWVSGLHKLDALTRILE
VETFDAMIIFVRTKAATEELAEKLQARGLTAAAINGDMQQAQRERTIHQL
KDGKLDILVATDVAARGLDVERISHVLNYDIPYDVESYVHRIGRTGRAGR
SGEAILFVTPREKGMLRQIERATHQPIEAMQLPSVDAVNDTRVAKFFGRI
SNALVVGAEIDFYRKLLQRFESEHNVPAIEIAAALARLLQGDSPFLLSVP
TRAQRERSEPPSEHVKRSSSFKQTERPNHTEHPKRPQRNAPARNTPEFGM
ESYRIEVGRIHGVKPANIVGAIANEAGLESRYIGRIDIRDDHSVLDLPAE
MPHEILQHLKKVWVSGQQLQMRRIDTTETTATAREFKSKPGGAGKFPPKP
HHNKSTKPKPPYSG
>XF1809 recombination protein
MRCFIANDACPFCILYPPVVINRVSEFTRLIVGFLGTSWAWDRRHVMSTH
LLEQLIDAFRILPGVGQKTAQRMAYHVLEREREGGQRLADVLSRAIEKIG
HCTECRDFSETKICAICANYSRDRHQLCVVESPPDRLAIEQATGYRGLYF
ILQGRLSPLDGIGPHELGLDHLGQRLAAGEVTELIIATNATVEGETTAHY
LALLARQHGIRPSRLAQGLPLGGELEYLDRGTLSHAFGTRTEVV
>XF1110 single-stranded DNA exonuclease
MLRRVYTARGCADPVTAQPCLAQLLSPATLSNIQAATVLLTQVIKANGRI
LVVGDFDCDGATACAVAVRGLRLLGARNVMHAVPNRMVHGYGLSSALVEE
LAPLQPALLVTVDHGIACHAGVAAAKARGWQVLVTDHHLPGEILPPADVI
VNPNLPGDLFPSKTLAGVGVIFYVLLALRARLYPVAHAEYEGQETLIHRS
ISQKNRPDLTSLLDLVAVGTVADLVPLDTNNRALVAAGLRRLRRGQGCLG
LRALIEVSGRDESQLTATDIGFALSPRLNAAGRLEDMALGIELLLTEDWT
RARAIAAMLEEMNAARRVVQQGMSDDAEQAVAQAMAQSGGVLPMAVCLFD
PDWHPGVIGLVASKMKDKMHRPVVALAPAEPGGTVLRGSARSIPGLHIRD
VLAALDSGYPGMIQKFGGHAMAAGLTLDAEVLPVFERVFRAQVEMMVDKN
VLQAELYSDGELAADELDALHARALRLGGPWGQGFPEPLFDGEFEVLQWR
VLKERHLKMEVRHSGRHDALNAIYFNGWQGDPPARRLRLAYRLVCDDYRG
GDAIQLIVEYAEVIECDVSGFQAISSGVLDP
>XF1774 DNA methyltransferase
MNPQPRTPRGAPQAAPLLYGSVCSGIEAVSLAWQPLGLEAAWFAEIEPFP
SAVLAHRYPRVPNLGDMTAIARQVRAGTVPAPDILVGGTPCQSFSVAGSR
RGLDDPRGALSLAYELANAIDQIRHQDRRSPATLVWENVPGVLNDRSNAF
GHFLGALAGESRALQPPGDRWAHAGCVSGPRRRIAWRVLDAQYFGVAQRR
KRVFLVASGGDDLDPAEVLFERAGLLGDSCAGRAPWQEAAHDAGPGAEAA
GACAGLAGFAGLKQPYGKVTTTFGFSGGIGPVDVAACLMAAGPKHDIRTE
TFMVQSVAGSIAHTLDTANNGKGSSEDGTGKGVPIIAFTAQGSGADATLD
LTPTLRAGGHRNSHANAGVVPAIAFAQNNRGEVRFESGHGQVACTVLSNG
KPGYGVPMVACVSLRGREQGLAAELGGTVAGALRISGGGADKPYVLAPDF
EAHFRYDWNDPGPGDWSHWRVRRLMPVECERLQGMPDDYTLIPYRGKPAA
DAPRYKAIGNSMAVPCMAWLGQRLVQYLHKTGSTASD
>XF0361 replicative DNA helicase
MSARPGFHSNYQREPGDREALRVDPLRVPPHSVEAEQAVLGGLMLAPDAL
DKINDRLTENDFYRRDHRMIYRAICDLSRKMRPFDVVTLGEWFESQGMLE
VVDHGAYLIELASTTPSAANIVAYAEIVRDKAVLRQLIEVGTKIVNDGFQ
PEGRESIDLLAEAEKSVFGIAETGARGRIDFVAMPGALKDAFEQLRDRFE
NGSNVTGLPTGYNDFDAMSAGLQPTDLIVLAARPAMGKTTFALNIAEYVA
IKSKKTVAVFSMEMSAAQLAMRLISSNGRINAQRLRTGQLEDEDWARVTG
AIKMLKETKIFIDDTPGVSPEVLRSKCRRLKREHDLGLVVVDYLQLMSVP
GNSENRATEISEISRSLKGLAKELNVPVIALSQLNRSLETRTDKHPVMAD
LRESGAIEQDADMIVFIYRDEYYNKDSPDKGLAEIIIGKHRSGPTGSCKL
KFFGEYTRFDNLAHDSIGTFE
>XF1943 histone-like protein
MAKIAKNAKAAPKKAVKKQTAKPGTIKPIKETLSKSALVAHLAESSALAA
KDVRTLLGALENTIHASLHKKGVGSFTLPGLLKISTVNVPAKPKRKGINP
FTKEEQWFAAKPASVKIKTRPLKKLKDATL
>XF0045 transcription-repair coupling factor
MSPSSFPAPLLPRAGQLRAFWRAPVSPTALAWHIACAAEAHRGPLLLVTH
DNHSAHQVEVDLQTLLVHCPELPVIGFPDWETLPYDQFSPDPNIVSQRLA
TLHRLPSLARGIVVVPVQTLMQQLAPLSYIVGGSFDFKVGQRLVLDAEKQ
RLERAGYRNVPQVMDPGDFTVRGGLLDVYPMGTDVPLRIELLDEEIDSIR
TFDPESQRSLNQVDVVHMLPGREVPLDPAVLERVLVRLRERFDLDTRRSA
LYQDLKAGLAPSGIEYYLPLFFESGRGGKHATATLFDYLSSDVLVLTALG
VSNAADAFWAQTMQRYEQRCHDIERPLLPPQELYQSPDALRERLNRLPRI
EVWSVEHAHIDKAEALDEQPLPVATKDASVGQALRAFLADYAGRVLIAAT
SPGRREVLLELLATADLQPEVLPDFRSFFLSVLEVRDLREANRDSGNGVS
GANDAAAFHVIASQGGSLPTFAITVAPLEDGFSLSVPPIAVLTERQLFPE
RVNPVRRSRRVGREPEAIIRDLGELSEGAPIVHEDHGVGRYRKLITMNVS
GMPGEFVEIEYAKGDRLYVPVAQLHLISRYSGASPETAPLHSLGGEQWSK
AKRKAAEKVRDVAAELLEIQARRQARAGLALRIDRTMYEPFAAGFPFEET
PDQLAAIETTLRDLQSSQPMDRVVCGDVGFGKTEVAVRAAFAAASAGKQV
AVLVPTTLLAEQHYRNFRDRFADYPIRVEVLSRFKSTKEIKAELQKVSEG
TMDVIVGTHRLLQPDVKFKDLGLVIVDEEQRFGVRQKEALKSLRANVHLL
TLTATPIPRTLNMAMAGLRDLSIIATPPLNRLAVQTFITPWDNALLHEAF
QRELARGGQLYFLHNDVESIGRMQRDLAQLVPEARIGIAHGQMPERELER
VMLDFQKQHFNVLLSTTIIESGIDIPNANTIIINRADRFGLAQLHQLRGR
VGRSHHRAYAYLVVPDRRSMTADAEKRLEAIASMDELGAGFTLATHDLEI
RGAGELLGEDQSGQMAEVGFSLYTELLERAVRSIKQGKLPDLDAGQEERG
TEVDLHIPTLIPEDYLPDVHTRLTFYKRISTARDSNALRELNVEMIDRFG
VLPDAAKHLFAIAELKLQATALGISKLELGENGGRIMFGAKPIIDPMAVI
QLVQKQSKLYSMEGPSKLKLKLPLPEPADRFNAARGLLAALTP
>XF0568 conserved hypothetical protein
MFFRNLTLFRFPTSLDFSQIDSILPNARLRPVGPLEMTSRGFISPFGREE
QEVLNQRQGDFLWLTVGSEDKILPASVVNDLLTRKCSEIEEKKGHPPGGR
ERKRIKDDLIHELLPRAFVKKSRIDAMLDLRYGYVAVDTASRKAAETVIS
EIRDLLGSFPALPLNAEISIRSMLTSWIAGEPLPEHLNLGDECEMKDATE
GGAIIKCQHQALRCEEIDKHLEVGKQVSKLALILDDHVSFVLGDDLVIRK
LKFLDGMLDQLEHSDTDGIRAELDARFALMSAEIRRLFLLLEVPLKLSKA
NN
>XF1716 mismatch repair protein
MQIESSHDYLIQTQSTSETFVTVHTPEGRFLQNIDMREKPEGGKGMAEHT
PLMKQYFAAKAEYPDLLLFFRMGDFYELFHQDARKAARLLDITLTQRGSS
GGAPIPMAGVPVHAYEGYLARLIALGESVAICEQIGDPGLAKGLVERKVV
RIVTPGTITDEVLLEERRDTLLMALSRSKNCYGLAWADLAGGRFLVNEVN
SEEALEAELARLEPAELLLPDEDAWPEYLQQRNGVRRRPPWLFDADSGRR
KLLAFFKLHDLSGFGIENNPQATAAAGALLGYIEETQKQRLPHLTSITME
TVGEAITMNAATRRHLELDTRVDGESRHTLLGVLDSTVTPMGGRLLRRWL
HRPLRLREVVRQRHAAVGSMIDRDLDNKLMETFRRLGDMERILTRVALRS
ARPRDISTLRDSLSLLPRLRELLNASDSPRLRVLYAELGEHDSTASLLVK
AVAEQPPLKLTDGGVIASEYDVELDELRKLSNNADQFLIDLETRERESSG
ISTLKVGYNRVHGYYIEISKGQADKAPVHYTRRQTLTNAERYITEELKAF
EDKVLSARDRALVREKLLYEQLLDTVGAQLEPLKRCAAALSELDVLVCFA
ERAQTLDWVRPELEHTSCLHIEGGRHPVVEAVREQRFEPNDLDLHPERRM
LVITGPNMGGKSTYMRQNALIVLLAYIGSYVPASRALIGPIDRIMTRIGA
GDDLARGQSTFMLEMTETSYILHHATAQSLVLMDEIGRGTSTYDGLALAD
AVARHLAHINRCYTLFATHYFELTALADETYEGGLSGIANVHFDAVEHSE
RLVFMHTVKDGPANRSFGLQVAALAGLPAAAVAHARRRLAELEQRGRESH
VSEITPLALDAPQQCSLFASAPSAAQEALVALHPDELTPKQALEALYRLK
ALL
>XF2501 phage-related protein
MRGILILTCCLYRPMVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCP
VVKRGGRGREWAFDTAVVARWLRDKAAEEAAGEAVADIEEWKRRKIAAEA
QREELHLADAKKQVAPLEQVEKTLARVFAEVRANLRTIPGRTVALLLGET
DERRYKRVLLQEIDQTLENLASLDLTQEDTDADEDEDEETGDV
>XF2122 hypothetical protein
MTRVDTQALRARIDLVELVGRSVTLRRTGAEYTGLCPFHDEHTPSFTVIP
HKGFVHCFGCGAHHDAIGFVMRYLNVDFREAVRQLDRGALPQAEQQAPRQ
RPKYVPDRVWVPLLPVPEDAPEVMRDAHWTVPLWNPKRGRPARLKVQRLD
AYRDAQGRLLGYVARAQIKDRDTGALKKWTPTLTWCVSPTGARQWCLQHF
PAPRPLFGLDTLAVKPGAPVLIVEGEKCCAAGARAWPQYAVVAWPGGTNG
IRQVDWTPLAGRDVVLWPDADEVGRKAMLGNRTDAGDVTPGVAHYLSRVG
VRRIGLIDTHGCSKGWDLADAFEKDGWTPPQAAAWAAARRVDVNVVRGGG
>XF2132 phage-related protein
MNIRQYLDWRTSKVIANREVSVFSHLWNWARSKGITDLPNPCGGIRRNKA
TGRDVYVDDTTYRAVYQAADRTLKDAMDLAYLTGQRVSDVVSMDERQIID
GALEICQAKTGVKLAIAITGELAVLIKRIFDRKRGLKLRSTRLIVDAKGL
ELSRTGLRYRFDKARVAAGIAKEVFQFRDLRAKAATDKADLAGDIRQAQA
QLGHASVTMTEHYVRKRRGAKVTPTR
>XF1235 hypothetical protein
MLPLAGSGTTGVAALRAGHRFIGMELSLGYSDVAKQRLPDRVCGFIRDVY
L
>XF0536 transposase OrfB
MPTVLRWTRTMCKRPTCRVRQAWLVLPITGRWPSGGVSMKHACMLDSALP
KPSQHSLRRQLNAIKREQFPWMSEVTKNAPQMAIIQLGRAFQNFFAGRAK
YPKFRKKGMHDRFTLTNDQFDLEASRIRIPRLGWVRMRETLRFAGKIMLA
TVSRVAGRWFVSITVDVPDPSHLPQAENQGTVGVDLGVLVLATLSTGETV
CGPRPHRALLGRVCRLSRSVLRKVKGSANRHKAKATLANLHARIAAIRLD
ALHTLTSDLTRRFHTIGIENLNVKGMLRNRHLARSIADIGFFEFRRQLEY
KAMMRGGQVVVANRFFASSKRCLTCGHTLNELPLSVRQWACPACGARHDR
DVNAAVNLKNMAVSSTVSACGEEGAGPRRKTAVGEAGSQL
>XF0050 DNA helicase II
MNVSHVLDHLNQNQREAVAAAPGHYLILAGAGSGKTRVLTHRIVWLNEVH
GVPTHSMMAVTFTNKAAGEIQQRIDLQLRHGKRGMWIGTFHSLAHRLLRL
HWNDATLPENFQVIDSDDQLRLVKRVIQSLGLNDTLFPPKQAMWWINTQK
DEGRRPEHIQPESHDDWIETQRRIYAEYQERCNRAGLVDFAELLLRAHEL
LRDTPALLTHYRSRFREILIDEFQDTNAIQYAFVRILANETGHVIAVGDD
DQAIYGWRGAKVEHVQHFLKDFPNVQTIRLEQNYRSSANILDAANAIIAH
NPDRIGKRLWTESGVGESIDLYAAYNEIDEARYIVERACQWVRDGGSYGE
IAVLYRSNAQSRAFEEVLQSEHIPYRVYGGMRFFERAEIKDALAYLRLLA
NRSDDAAFERVVNTPVRGIGERTLDEVRHLARTQGLALWDAAMACTQSTT
LTARARNALASFLNLLQQLAVETSQMGLAERIDHMLLRSELREHWKKEAR
GSLDAESRQENLDELVSVASRFVLPQNDEDTPIMTELDAFLSYTCLESGD
GQVQAGEEGVQLMTLHSAKGLEFPLVFLVGLENGLFPSARSLDEHGRLEE
ERRLAYVGITRARHKLILSYAEARRIHGKDNYNIPSRFLREIPRDLLHEV
RPTIQVSRQTPLGAVQRPAHDERDAAPIKLGVNVMHPTFGCGVVVDYEGS
GAHTRVQIKFDDVGTKWLVMAYAKLSVV
>XF0354 ATP-dependent DNA helicase
MPRARSHAPDLNVAGNAPLSVLPRVGPVLAGKFAARGIFTLQDLWLLLPL
RYEDRTRLTPIAELQDGVAVQIEARVEAVERSFRYRPLLRVVLTDDAHHI
LTMRFFHFRAAQIARFTVGTRVRAYGVPKLGQYGWEIVHPSYRILAPGED
VRLNDCLDPVYPVIEGVGPAIVRQLIREALEHLPTDAVLELLPDVWLSDL
GLPMLRTALLIMHRPPLNTDIARLMVGTHPAQQRLSLEELLAHQLSLRRQ
RIALQRHSAPALPDGAALVASLLHALPFHLTAAQQQVFAQIAADVAKPVP
MLRLVQGDVGSGKTVVAALAALLAVEQNKQVALAAPTALLAEQHFINLRD
WLEPLGVRVHWLAAKVTGKARLQALNDVASGDAQVVVGTHALMQESVVFH
DLALTIVDEQHRFGVHQRLLLRDKGATAGIVPHQLVMTATPIPRTLAMAA
YADLDVSVIDEMPPGRTPVQTNVLSAERRPELVERIRLACAQGRQVYWVC
TLIDESQTEAEQAPPSSNDIEHRSEVQAAQATYEALSAQLPGVRVGLVHG
RMKAAEKQRTMRAFKCNEIDVLVATTVIEVGVDVPNASLMIIENAERFGL
AQLHQLRGRVGRGSVVSSCVLLYQPPLSMLARQRLEIMRQTNDGFAIAEK
DLELRGPGELLGTRQTGLAAFRVADLARDAHLLPRVYSLANMLLDESPQL
ADQVIARWIGSAVRYASA
>XF0430 DNA primase
MARIPDAFIDELLARTDIVEVVGSRLPLKRQGKEYASRCPFHDERSASFY
VSPTKQFYHCFGCGAHGTAISFLMNYDRLEFLDAVDELAKRAGMEIPRET
QQKHAHQEDSRPLYAALEAASHFFQKHLENNPKVQAYLNERGVDINTRTR
FQIGYAPDGYSVLKDTLGTDERRITLLDRAGMLSKNDRDHVYDKFRDRVM
FPIFDRRGRVIAFGGRVLDKDKSPKYLNSPETTLFHKGRELYGLWQVRQA
HQNIERLIVVEGYMDVISLFQFGITQAVATLGTATTVEHAELLFRNTPDV
YFCFDGDNAGRKAGWRALESILPRMKEGRQAFFLFLPDGEDPDTIVRKEG
KNAFNERLKQAIPLSQFFFDALSSDIALHTLDGKARLAERARPLLMKIPE
GAFNDLMRQRLAHLTGVNIAHPGPAPAATSRPATRLPAQKRNLIHTTIAI
ILQQPSLAMTLNTPYPLAINDLKQPGIALLLELLDLIHQRPEITTGALLE
HFTEREEYVLLQTLATQTMPGNTATWTQELQGAMTQMQKQLLQQRLDALH
TKQLTQPLDDIDKYELRELLKTRATLR
>XF2525 phage-related DNA polymerase
MATAQPPAPILWGDLETYSPVPIAHGVHAYAEHAELLLFAYALGEGPVQV
WDCTATATLPDDLSAALHDPGVLLYFHNSHFDRTVLRHCGIDIPLERWRD
SMAQALAHSLPGALGTLCELLRVPVEHAKDKDGKRLVALFCKPRPAHCTL
RRATRDTHPTDWAQFVEYAQRDVAAMRDVVKRLPSHNYAGAELALWFLDQ
TINDRGVLIDTDLVQAAIRAVERAKQTLAQRTEALTGGAVQAATQRDALL
QHLNTAHGVALPDMQQHTVARCVDDPALPETVRELLSIRRQASSTSTAKY
QALLHCTSPDGRLRGTLQFNGASRTGRWAGRLFQPHNLPRPTLSQEVIAV
GIDAMKADCVDLVFDDVMALTSSALRSCLIAPTHKKLVVADLSNIEGRVL
AWLAGETPKLHAFREFDTCQGVDGCWHTGAAITHGALRAAPLALQRNADH
APIRRGDDIYKRAYAHSFGIAPQAVSKEQRQIGKVQELALGYGGGVGAFA
AFAALYHIDLEAMAAQAVFPPLLLQEATELLEWTKANHRPTFDLSDRAWL
ACDVFKRAWRNAHPAIAAFWQALQFAVTDAIHHPETTHTCCGITVQYRRA
WLRLRLPSGRVLYYAAPRVDEHGALSYMGTHPITRKWTRLTTYGGKLVEN
ITQAVSRDVLAACMPAIEAAGYSIVLTVHDEIITEADDHPCFNAAHLAAL
MATPPPWAEGLPLAAEGFDTYRYRKQ
>XF1286 topoisomerase IV subunit B
MNSRYNAADIEVLTGLDPVKRRPGMYTDTTRPNHLAQEVIDNSVDEALAG
YANRIEVTLYKDGSCEVADNGRGMPVDIHPEEKIPGVELILTRLHAGGKF
SNRNYTFSGGLHGVGVSVVNALSSKVDLFIKREGSEHHMEFREGFAVSKL
KVLGTVSKKNTGTRLRFWPDSKYFDTPKFNVRVLRHLLRAKAVLCPGLTV
ELLEEATGEINTWHFKDGLRDYLKGEMTESELLPAELFIGCLKKDTEVVD
WAVAWVPEGELTQESYVNLIPTPQHGTHVNGLRSGLTDALREFCDFRNLL
PRGIKLAPEDVWDRVTFVLSLKMSDPQFSGQTKERLSSRQAAGFIEGTVH
DAFSLWLNQNVDIGEQIAQIAIERASARLKTEKQVTRKKITHGPALPGKL
ADCISLDLSRTELFLVEGDSAGGSAKQARDKDFQAILPLRGKILNTWEVA
SGNVLASDEVHNLAIAIGCDPGKDNLSGLRYGKVVILADADSDGLHIATL
LTALFLKHFPALVAAGHVFVAMPPLFRVDVGKQVFYALDDEEKTMLLEKI
KREKIKGQVSVTRFKGLGEMNPQQLRESTIHPDTRRLVQLTMDDNTQTCS
LMDMLLAKKRASDRKQWLETKGNLASLDI
>XF2556 DNA ligase
MTDPALMIPLDPAQRAAELRCRLQEANYHYHVLDQPRIPDADYDRMLREL
DALEAAYPDLATPDSPTQRVGHTIATAFSEVRHTVPMLSLNNAFSDPEVL
EFVRRITACLGETAPGFSAEPKLDGLAISLRYQNGIFIQGATRGDGVTGE
DVTANLRTLPTIPQRLQSDTWPTVLEVRGEVYMPRPDFEAYNTQARLRGW
KVLANPRNGAAGSLRQLDPHITAQRPLSFYAYGIGEVTDDVSFHRHSEIL
ASLRAWGFPVSPLVELVYGSEELLNYYRRMETIRDTLPFDIDGIVYKLDD
LSGQREMGFVARAPRWAIAHKFPAQEQTTTVEAIEIQIGRTGAATPVARL
TPVQVAGVTVTSATLHNADQIARLDVRIGDTVIVRRAGDVIPEVVTVITD
SRPLGATAWSMPMACPVCGSEIVRETGAAVWRCSGELACPAQRKEAIRHF
VSRRAMDVEGLGVKCIELLVDAAVVHGVADLYHLSLDQLLRLRLVTNAQT
PTMLLREARDHVTGMRYQQLEEILRTVGVDLSGEGDVPKHWQIDVLRAQW
PDFDWNHKKIATKWAQNLIAAIDRSRQTTLERFLFALGMTHVGETTAKAL
AHSFGDLAIIRQLPWPLFKCVPDIGGEVARAIGHFMDQPANQQAIDDLVE
RGVRITDTHPPTSTLRDQLTLASLLEHLDIPKITPLRAVQLAALAPTLPL
LAEAALDTLLQAGVSQPAAQSLTEWFQSPDNISLARRLQHCCDVLLAQLP
SADRAHTAPLNGQSVVLTGKLASLTREAAATRLEMLGAKIVGSVSKKTSF
LVAGEDPGSKLDKAHALHVDIWDEARLLAFLGQYSAQ
>XF0979 conserved hypothetical protein
MRVCGEGHVRIIGGRWRNTRLRVPELPGLRPTASRVRETLFNWLMPVLPG
AHVLDLFAGSGALGLEAVSRGAARAVLVERHAELVVRLREQVARLGAQDQ
VEIVQADALQWLQRPAAVRFDIIFLDPPFAAGVWETVVVRLAGHVAVAAW
LYMESPVDMEPVMLPGWELHRDDRTREVCYALYRYPAVTLPVGSKSVSSV
>XF1647 hypothetical protein
MKIIELTQGTPQWHTHRAQHLNASDAPAMMGCSPYKSRAELIRERATGIT
PDYDQATLQRFAEGHRAEELARPLAERIIGDDLYPCVGVDGMYSASFDGL
TLLEDTVWEHKQLNDTIRAAMTDGSTGQDLPFHYQLQMEHQSMVSGAQRV
LFMASAWNGEQLIEERHCWYTPTPELRNRIINGWHQLQADIAAYQPEPPP
PPAALGRSPEQLPALHIAVTGTVTTSNLPHFKACALAVLHSIKRDLHTDE
DFANAEQTVKWCKGVETRLDATKQQVLGQTADIDAVFRTLDEIAEETRRV
RLELDRLVNTEKAHRRTEIVHSGLNTLRDYYASSNATLGEYALPIPADLP
AKIGDTIKGKKSMISMQEAVSTAVAHEKSNITAHVERVRTNITVLEECGT
AYLSLFPDRVSLCISKTPDDLRNLILARIAHHQQQEQARIQAERERQNTV
EATPLPTSPTVNCSTESSVTTAPTPASIHTTLKLGEINALIAPLSINADG
LAALGFVPVNTERATKWYAAAEFPVICHTLKQVLSDAASRTAIQQAA
>XF2530 phage-related integrase
MGRKPSKTGAIPRFRVRPQKSGVVYYYYDHGGTPRKETPLGRDYGVAIKR
WAELEHAQITPAIAVTFRHVAERYRAEVIPTKAYNTQRVEHRCLAALLKF
FDDPPAPFEAIKPVNVRQYLDWRTSKVSANREVALFSHLWNWARSKGITD
LPNPCAGIRRNKERGRDVYIDDTTYRAVYHAADQTLRDAMDLAYLTGQRV
GDVASMDERQIIDGVLLIRQAKTGAKVAISITGELAVLIKRIFDHKRGLK
LRSTRLIVDEKGFGLGCMALRYRFKKARAAAGIAKQVFQFRDLRAKAATD
KADLAGDIRQAQAQLGHTSVVMTEHYVRKRRGAKVTPTR
>XF2153 conserved hypothetical protein
MLHRIVTLERMVAFDANEILTPFCEGHREGAILFDCQRLRQVEYGLFVPA
WWGGRAHAVSEGGRGSAWFVEASFGNAVLRQYRRGGMIAMLNRDRYFWCG
GHRTRSVLEFRLMRELISRGLPVPTPLAACYVRYGVQYRAAILMERLEGV
SSLAMCVRGNSKETHWEQIGRMISRFHREGLDHADLNAHNILLDQAGQCW
LIDFDRGALRIPATKWRERNLARLLRSLLKIRGERSVDAVYRDFERLRRA
YDLAWSRGC
>XF1846 hypothetical protein
MARALGFAALRSNTEYQGFANAARARSRADWLIGINFSRAYTLRTQRGGS
RALLRR
>XF2157 DNA polymerase III, epsilon chain
MRNKKRQIVLDTETTGLEWSKGNRIVEIGAVELLDRRLSGDKFHRYLKPD
VSFESGAQEVTGLTMEFLADKPEFSMIADEFLAYINGAELIIHNAAFDLG
FLDYELSRLGSQYGKITDRASVLDTLVMARERYPGQRNSLDALCKRLGVD
NAHRQLHGALLDAQILADVYIALTSGQEEIGFALPESSRGGVDAASVAFM
PDVLLTRPCVVVSQSELEAHEARLAKLRKIAGHVLWDAI
>XF0505 hypothetical protein
MTRVDTQALRARIDLVELVGRSVTLRRTGAEYTGLCPFHDEHTPSFTVIP
HKGFVHCFGCGAHHDAIGFVMRYLNVDFREAVRQLDRGALPQAEQQAPRQ
RPKYVPDRVWVPLLPVPEDAPEVMRDAHWTVPLWNPKRGRPARLKVQRLD
AYRDAQGRLLGYVARAQIKDRDTGALKKWTPTLTWCVSPTGARQWCLQHF
PAPRPLFGLDTLAVKPGAPVLIVEGEKCCAAGARAWPQYAVVAWPGGTNG
IRQVDWTPLAGRDVVLWPDADEVGRKAMLGNRTDAGDVTPGVAHYLSRVG
VRRIGLIDTHGCSKGWDLADAFEKDGWTPPQAAAWAAARRVDVNVVRGGG
>XF2739 type I restriction-modification system endonuclease
MLLCSESKHSRRTAMAFLSEATLEQALLEQLRALGYSIEREENIGPDGYR
PERASHDEVVLKQRFVDAVARLNPGLPPEARQDAIRKVTQSELPSLLEEN
RRIHRLITEGVDVEYYAQDGTLTAGNVALIDFDHPQQNDWLAVNQFVVIA
DHYNRRPDVVLFVNGLPLAVIELKAPGSINATLIAAFNQLQTYKEQIPAL
FNTNALLVTSDGMTARFGALSADLERFMPWRTTDGTDIAPKGVPELATLI
EGICEPHRLLDLLRHFTVFRKTDAGLAKIIAGYHQFHAVRQAINSTVAAS
SPQGNQRIGVIWHTQGSGKSLLMAFYAGQLVKHPAMANPTLVVLTDRNDL
DDQLFTTFSQCSDLIRQTPVQAQSRDQVRKLLNRASGGVIFTTLQKFGDI
TEPLTTRRNVVVIADEAHRSQYGFKAKVDTKTGKISYGFAKYMRDALPNA
SCIGFTGTPIEADDVNTPAVFGNYIDIYDISRAVEDGATVPIYYESRLAR
IALDEAEKPQIDAEVNALTEADSEAEQERFKKKWATVETLVGSDKRLALI
AKDIITHCEDRLAALDGKAMVVCMSRRICVALYDHIVALRPDWHSTDHKA
GSLKIVMTGTASDPPQWRQHIGNKARRDLLAERARDPKDPLKLVIVRDMW
LTGFDAPCMHTMYLDKPMQGHGLMQAIARVNRVFRDKPAGLIVDYIGIAQ
NLRTALQQYSKNDQQHTGVDEAQAIALMMEKYQIVRDMYHGYDYHTAMSG
TPQERLAMMGGAIEWILNLQQQLAAIAQTKEGKKEAHRRYQDAVLALSKA
FALASASDEARHIREDVGFFQAIRAALVKSADHSGGSEPQRDLAIQQIVS
RAVVSTEIVDILAASGINSPDISILSDAFLAEIQQMQRKHLALEALRKLL
NDRIRSRSTVNLVQTKAFSERLEGAVARYHANAITTAQVLQELIQLAKDI
RAARQRGEASGLSDEEVAFYDALAENESAVQMMGDHTLRLIAHELLMRLR
ENVSVDWAHRDSARARMRVLVKRILRKYGYPPDLQNTAVQTVLQQAEAFS
SQWSASGP
>XF0647 endonuclease III
MRRGSTMTRAEIREAFVRLQEINPHPTTELKYTTPFELLIAVILSAQATD
IGVNKATRRLYSLANTPQAILDLGEDALKRHISTIGLFNAKAKNVIATCR
ILVEQYGGAVPRDRAMLEALPGVGRKTANVVLNTAFGEPTIAVDTHIFRV
ANRTGLAIGSNVRVVEDALLKRIPQEFLKDAHHWLILHGRYVCKARKPNC
SQCVIADLCRYKDKTPAA
>XF2131 hypothetical protein
MMGGKPIKTGAIPRFRVRPQKSGVVHYYYDHGGKPRKETPLGRDYGLAIK
RWAELEHAQITPAIAVTFRHVAERYRAEVIPTKAYNTQRVEHRCLAALLK
FFDDPPRRLRPLNR
>XF0204 DNA polymerase III, alpha chain
MFPPLLKATLPDALLRRSGMSTSSFVHLHIHTEFSLADSTIRVPEKPEQA
HPKKAKQANLLSRAVELGLPALAVTDLNNLFALIKFYKAAETVGIKPISG
ADLLIAEPEHTPWGMTLLCRDHAGYLNLSQLISRGWLEGHRPEGGVAVHP
DWVRDHHKNLFALIGRHSLAGQLFAKGRADLAEQQLADWQHVFGNGLHLE
LTRTGRDGEEPFNQFALQVAGIRGIPVIASNDVRFLVPSDFLAHEARVCI
ASGRMLDDPKRPRTYSEQQYLRSSEEMAALFTDIPDALDNTRTLAQRCNI
EMRLGTYFLPNYPVPNDETLDSWIRKQSHEGLEARLLKHPLAPGQTREDY
VTRLEFELDTIIKMGFSGYFLIVADFIQWGKQQGIPIGPGRGSGAGSLVA
WTLLITDLDPLPYNLLFERFLNPERVSMPDFDIDFCMERRDEVISYVARK
YGRERVSQIITYGTMAAKAVVRDVGRVLGFPYGLVDSIAKLIPNTLGITL
KDAMGEGETNDNASAELIQRYQAEEDVQELLNLARQLEDLTRNAGKHAGG
VVIAPNPLTEFCPLFAEHDENGRGKNPVTQFDKNDVEEVGLVKFDFLGLR
TLTIIDWAVKAINKRHARACIDPVDITALPLDDIPTYKDIFASGNTSAVF
QFESSGMRRLLKDARPDRFEDLIALVSLYRPGPMDLIPEFTARKHGVQET
IYPDPRTKNILKDTYGIMVYQEQVMQMAQIVGGYSLGSADLLRRAMGKKV
PAEMAKHREIFREGAAKGGMDAVKADEIFDLMEKFAGYGFNKSHAAAYAL
VSYQTAWLKRHYPAEFMAATLSSDMDNTDKVVGFLDEARNLNLKVLRPNI
NHSVYMFEATHADTIQYGLGAIKGVGQSVCEAIVKERLHYGPYTSLLNFC
TRVASAKLNRRALEAMIHAGALDELGKNRASVMLQLPEVIKATEQMSRER
ESGQNPLFGNADPSTPAIQLDLPECEEWPLTRMLNGERETLGLYFSGHPF
DPYRKQVKELVGCDLNTSALERILGSQQRGNGEKRTWHPEVNTILAGLVV
SVRRKGDSQVFVQLEDGRGRIECSAFSDALAEFGHLLTRDRILIVKGGLR
EDEFNDGYSLRIRQCWDYTQLCTDYAQRLLLRVDLRTSDAWERIDAILAR
YRPGNTPLRLDLLLNSTHGPVAGTLDLSGAQSVRIEQSLLDKLQKDPAVS
TLKVKYTPPWVQ
>XF2689 primosomal protein N'
MPPTILRVALPIPLPQCFDYLPPSGIPLPDSTLGCRVRVPFGKRELIGVV
VELPSAEMSVPLREAFAWIDRIPILDGELAQSLQWLSHYTHTPLGEILAT
ALPGLLRHGKPLPETWTCWAWRLTETGRTAAPKLRRNSRSAQLAELLTTS
DQTEDALNTRMNHWRTVARNLTKRGYVERIKKPTTVSLIIQTTSNTVPVL
NTEQQKAVETLNANVGFKTYLLDGVTGSGKTEVYLQAIATCLAASKQALV
LVPEIGLTPQLLTNFHARLGIPVHALHSKLADNERARVWAAARCGEARLV
LGTRSAVFTPLPHAGLIIVDEEHDTSYKQQDGIRYNARDFALVRGKALNV
PVILGSATPSLESLYNAHNGRYKHLRLTYRAGQAYAPQVRVLDVRKRPLK
DGLSPEVLTGINATLARDEQVLVFKNRRGYSPVLLCHDCGWTATCQQCST
SVHRTPMTVYTGGTYLQCHHCDARQPMPLSCPDCGSTALQPQGIGTERLE
ARLIEAFPKHPVVRIDRNTTQHRDALKTQFTELGNAAGILVGTQILAKGH
HLPRLTMVVVVGIDEGLFSADFRATEKLSQQLIQVAGRAGRAKHAGEVWL
QTHHPDHPLLQTLINGGYHTFANTELQQRQAAGLPPFAHLALLRAEAKDT
TSTQQFLATVRKHIPIDNAVECYGPMSAPMPRRAGYERYQLLLSSSQRNT
LHRTLNVLIPAIHALPEARRVRWSLDVDPVDLY
>XF0710 phage-related protein
MRGILILTCCLYRPMVLQKQQGKQVNRAGLSEIFGVALPTVDQWARNGCP
VVKRGGRGREWAFDTAVVARWLRDKAAEEAAGEAVADIEEWKRRKIAAEA
QREELHLADAKKQVAPLEQVEKTLARVFAEVRANLRTIPGRTVALLLGET
DERRYKRVLLQEIDQTLENLASLDLTQEDTDADEDEDEETGDV
>XF2313 site-specific DNA-methyltransferase
MIVASSAAYRLHEGDALRLLCDIDSASVDAVITDPPYCSGAMRMSDRFQP
TKKKYINNGTKHVAPDFDCDFRDHRGFLAWSSQWLSECRRVTRPGGVLLV
FTDWRMLPTLTDAVQSAGWAWQGIVVWDKTPACRPQLGRFRSQAEFIVWA
SCGLMNPKAHPVTPVGVFPTGTAPREKRHQVGKPLALMEHLIKIVPPAST
ILDPFAGSGTTGVAALRAGHRFIGMEIAPYYCDVAKQRLADRA
>XF1425 integrase/recombinase
MTPRTTNQRRQLARQQPPLLPEDATTIAHFLDALWIKHGLSQHTLNSYRR
DLEGLARWNNGRAGPLATLTPPALLDYLTWRTQQHYSPLSNARLLSVLRT
FFSYAVECGWRNDNPSTLLAHPVLPHPLPKALTESQIEALLAAPSIETPE
GLRNRAMLELMYAAGLRVSELVTLPVAMLNRRQGVLRIIGKGGKERLVPL
GEESQHWLQRYLEQARPSLAADKPIPADSDGDVPLFINTTLKRLSRQQFW
RWIKHYAALAGIAPNKVSPHVLRHSFATHLLNHGADLRALQMLLGHRSIS
TTQIYTFIARQHLQQLHAQHHPRA
>XF1483 site-specific recombinase
MSRLVDDFFAFLHVERGMSAHTLDAYRRDIGALIAWGVQQAVGEVVALDR
AQLQAFVAAEHRRGLSAKSLQRRLSACRGFYAWLVKRGHIAINPAAGLRA
PKALRKLPRILDADEAVSFVQIPTDTPLGLRDRALLELFYSSGLRLSELC
GLRWGGVDLDAGLVSVLGKGSRQRVVPVGSYALSALREWCASSGGGAQQP
VFPGRYGGPISARAVQVRIKQLAQRQGMAKHVHPHMLRHSFASHLLESSG
DLRGVQELLGHADITTTQIYTHLDFQYLSKVYDAAHPRARRKAR
>XF2680 ATP-dependent DNA helicase
MSQANGLPYTDRYNTYPENVSLMHGLNSPQRAAVLYREGPLLVLAGAGSG
KTHVIVEKIAYLITSDCYPAKRIAAITFTNKSAKEMRERVAKQIKSSRAD
GLTICTFHALGLKFLQIEHDAVGLKPGFSVFDADDADAQINDLLHGAKQD
VIDDTKRRISRAKNAGLSPEQALAAARTTREMEVATLYARYQARLIAFNA
VDFDDLIRLPVQILETSDQVAMAWRERIGYLLVDECQDTNDAQYRLLKVL
ASPRGNFTCVGDDDQSIYAWRGANAENLLQLERDYPQLKVIKLEQNYRCP
NRVLRAANALIAHNPHAHLKTLWSDQKDGERIRIWECRDSEHEAEKIAGE
ISYLGDAKQVPWSDFCILFRGNFQSRPLEKALQLLRIPYHLTGGTAFLER
QEVKNLLSWLRLLVNPDDDAAFLRAVQSPKREVGSTSLAKLAELAAAKQM
PMSRAAESLGALQQLPARAANGLNKFTDILRELRQQVSRVSAAELVRRLA
EVSGLLTELREQSNDEASYQRRKRNVEELAEWFEGGPFGASVGDLVSQLA
LLSRNDKDDGGNQVRMMTLHASKGLEFRYVFIAGCEDGVLPHEVSLEEGN
VQEERRLLYVGITRAKEQLWMSYSKCARRFGERVRFKPSRFFDELPAEEL
QRDGADPVVDAERKQERAKAGLAAIQALLD
>XF0005 DNA gyrase subunit B
MTEKQNTSLLSNGGIYDSSKITVLRGLDAVRKRPGMYIGDVHDGTGLHHM
VFEVVDNSVDEALAGHADSILVKIHVDGSVSVSDNGRGIPVDIHKEEGVS
AAEVILTVLHAGGKFDDNSYKVSGGLHGVGVSVVNALSERLWLDIWRDGY
HYQQEYVLGEPQYPLKQLGVSAKRGTTLRFKPAKEIFSDVEFHYENLAKR
LRELSFLNSGLQVSLIDERGEGRRDDFHYEGGIRSFVEHLAQLKTPLHSN
VISVTGEHNGIVVDVALQWTDAYQETMYCFTNNIPQKDGGTHLAGFRAAL
TRTLGNYIEQNGIARQAKITFSGDDMREGMIAVLSVKVPEPSFSSQTKEK
LVSSDVKPAVEATFGLRLEEFLQENPNEARAIAGKIVDAARAREAARKAR
DLTRRKGVLDIAGLPGKLADCQEKDPAMSELFIVEGDSAGGSAKQGRNRK
NQAVLPLRGKILNVERARFDRMLSSAEVGTLITALGTGIGKDEYNPDKLR
YHRIIIMTDADVDGSHIRTLLLTFFYRQMPELIERGHIYIGLPPLYKLKQ
GKSELYLKDDIALNVYLANSAVEGAQLLPAEGEPPIEGLALEKLLITYIA
AKDTIARHSHRYDSRLLEALLEFTPLDSTCFQSYSDSEHLQSLMALLNQS
SLGAPRYILKMQFPDEQHPAALLATRYHMGEELTQVLQLSALETGELRPL
YEAAKLLHGLIRNGAKIVRGTKSQSIECFGDAQAWLLEDAKKGRQIQRFK
GLGEMNPEQLWDTTVNPDTRRLLQVCIEDGIAADQIFSTLMGDVVEPRRG
FIENNALKVTRLDI
>XF1103 DNA polymerase I
MSKLVLIDGSSYLYRAFHALPPLSNAAGEPTGALFGVVNMLRTTLKERPD
YAAFVIDAPGKTFRDALDSEYKMHRPPMPDDLRVQVEPMCGIVQALGIDI
LCIDGVEADDVIGTLALAAVADGIAVTISTGDKDFAQLVRPGVELVNTMT
GSRMDSAMAVINKFGVAPDQIIDFLALMGDAVDNVPGVDKCGPKTAAKWL
AEYGSLDAVIANADKIKGKIGDNLRVVLPRLLLNRALITIKTDVVLEKCP
QDLALRERDTEALRGFYQRYGFTQALKELDGGSVAVTVAEQEPGRGRNAG
FHVAPDASVAMEINPALSAPGEYETIFTVEQLQDWIVRLRVAGQFALDTE
TDSLDPMQAVLIGLSFAAEVGCAAYLPFGHDYPGAPVQLDRGQALALLQP
LLEDAAVRKVGQHGKYDMHVLRRYGIVLAGYADDTLLESFVLTSGHARHD
MDTLARRHLGYETMKYVDLVGKGAKQIPFSHVGVQEATRYAAEDADITLR
LHCVLAPKLLAEPSLERVYREIEMPLVAVLERIEANGVQIDAEELYKQSA
DLSRRMVIAQQKAMDLAGRHFNLDSPKQLQVLLFDELKLPVVVKTPKGQP
STNEEALEAIVDQHALPRVILEYRSLAKLRNTYTEKLPEMIHPHTGRVHT
NYHQAGAATGRLSSSDPNLQNIPIRTDDGRRIRRAFVAPSGRKLIACDYS
QIELRIMAHLSGDAGLVDAFESGVDVHCAIAAEVFGRGIDEVTLNERRAA
KAINFGLIYGMSAFGLARQLGISRGEAQDYIALYFDRFAGVRDFMENTRQ
QARDRGYVETVFGRRLYLNSIASGNQTQRAGAERAAINAPMQGTAADIIK
RAMVAVDGWLGVGGHRERALMILQVHDELVFEADEGFVPTLVHEVSARMA
AAAQLRVPLVVDVGVGHHWDEAH
>XF1845 hypothetical protein
MRDREIEAFKSIPYHTIRAAFKHEGGVFVAVWRAKEDQVGLDPEGRLVDT
VIANTLVESITGHIGKVIEYKQEPKKKAQPRAYSLSDMTLLASNKFGYSA
ADVLEVCQSLYETHKLIVGTCRNHNYLITATIATVDSISNLMGMTITWTS
WHGNSTTAIRF
>XF2028 DNA invertase
MLIGYARVSTQDQNLDLQIDALTKAGCQKLFNDKISGSNKERPGLTKTLE
MLREGDTLVVWKLDRLGRSVKNLVDLVGDLHKQGVQFKSLTDAIDTGTPS
GRFFFHVMASLAEMERELMVERTRAGLEVARKLGRKGGRKLKMTESKVES
AKKLLASGMAPRDVARNLGVSIPTLYRWIPAAGNP
>XF1392 single-stranded DNA binding protein
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQER
TEWHRVKFFGKLGEIAGEYLRKGSQCYIEGSIRYDKFTGQDGQERYVTEI
VADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQARQPSQSPQSS
PPPMDDFADDDIPF
>XF0278 hypothetical protein
MSRPFSVSETLKADCFGRILLVNGKGEKFIRRDLGAVSWWLRGLAGWLAR
REVAALRQLNTLPAVPRLLNWDGVCLDRSFLSGQMMYQCPPRGDLAYFRA
ACRLLQQMHRCGVVHNDLAKEANWLVLEDGSPGVIDFQLAVRGDPRAPWM
RLLAREDLRHLLKHKRMYCPEALTPVERRLLKRPSWIRRLWFATGKPVYR
FVTRRVLHWEDNEGRGAKP
>XF1229 ATP-dependent helicase
MNHHALPIDPLLPAITTSLSNHPRLILEAPPGAGKTTQVPLALLDAPWLN
GRSIILLEPRRVAARNAALFMARQCGEEVGGLVGYHIRFESKVSARTRIQ
VVTEGILTRIIQDDPLLDGIGALLFDEFHERHLASDLGLALALDVQTQLR
EDLRIVVMSATLQGERLAQFLDAPRLTSEGRAYPVAITHFPARRDESLET
HARRAIQHALDTHQGDVLTFLPGQREIARLQAILEKTLSPELHVMPLHGE
LPLKEQARVLEPDQHGRQRIVLATNVAESSITLPGISVVIDSGLAREPAY
DPNTGFTRLDVVSITQASADQRAGRAGRLAPGWAYRLWPQSQRLEAQRRP
EMIQTELSGLALELTAWGSSTLRFIDPPPAGALSAARELLQRLGAISNTS
TLTPLGQRMLALGIHPRLAAMLLAPHDPQEQALACDLAALLDARDPLRGS
GDALISRWRALAELRSSCLPHDTRRSTLRAIDAATHQWRRRIRCDTTPPD
AIEAHTLGNLLTHAFPERIAARHSSDPLYYVLANGRRMRLFDNSALHGEP
WIIASELHHGIKDIQLLCGAPLDERRLHADFPERFIQHDVIRWETDKRAL
VAQRESCFDRIVLDVRPAGRIDPVQAANVLTGAVRTLGLDTLSWTEHLRQ
WQARAVALRHWMPELELPDLSNTTLLATLDTWLTPAFAGKTRLDALDEAA
FEQAVKSLLSWTQHALIDRHAPARIIVPSGMERHIDYGLADDGTPQPPVL
AVKLQELFGLPDTPRIAKNRIPLTLHLLSPGGRPLQVTQDLKSFWTNTYP
EVKKEMKGRYPKHPWPDDPWTATATHRTKSPGK
>XF2598 6-O-methylguanine-DNA methyltransferase
MMSPLCYDIFDSPIGILTVVADTDALCRVMLPSNDHTTQEHKCWHYAPST
TLLKQARTQLLDYLHAELHTFSLPLRPQGTPFQCAVWHALAHISFGQTWS
YAQLAAHIGRPSASRAVGAANARNPLPIVLPCHRVIGSNGALTGFNGGLH
IKRSLLYLEGIKPTHTCKAIMTS
>XF2725 type I restriction-modification system endonuclease
MSEPIPPFRYAPIVCSEQSTIVAEFVPEASGVREAGYQSEAELEAAFITQ
LQGQAYEYLSITSEAALLANLRRQLEKLNKVTLSDAEWEGFFSTCIAGAH
DGIVQKTARIQEDHVQVLKRDDGTIKNMCLLDKGNIHNNILQVMNQYAVE
GARGNRYDVTVLVNGLPMVHVELKRRGVDIREAFNQINRYQRDSFWAGSG
LFDYVQLFVISNGTLTKYYSNTVRAGHVEEQSNKRSKSKTSNSFSFAIWW
ADAKNQPITELTSFTKTFFAKHSLLNVLTKYCVFNANRKLLVMRPYQIVA
AERILQRIVTATHQQQLGTVAAGGYIWHTTGSGKTLTSFKVAQLACGLGV
IDKVLFVVDRKDLDYQTMREYESFEKGAANSNTSTAVLQRQLEDSDVRII
ITTIQKLSRFVAKHKQHPVYGAHVAVIFDECHRSQFGDMHTEITRAFQRY
HLFGFTGTPIFAENAGSTQNPMRRTTQQTFGDTLHTYTIVDAINDKTVLP
FRIDYINTIKSQPNINDKQVAAIDTERALLAPERIRQIVSYIREHFDQKT
KRASIYRHEGQRLQGFNALLATASIDAAKRYYAELMAQQKDLPEAQRLKV
GLIYSVAANEGDGDELLAEEEFETERLDQDARNFLEAAIQDYNALFGTSF
DTSADKFQNYYKDVSERLKKRKLDILIVVNMFLTGFDATTLNTLWVDKRL
KAHGLIQAYSRTNRILNSVKSYGNIVSFRNLEQETNEALALFGNKDAKGI
VLLRPYAEYYKEYEERVGELVAAFPLGKVIVGEAAQKAFITLFGSILRLK
NILTAFDDFAGQEVLTEREFQDYQSLYLNLYAEFRSASAAEKESINDDVV
FEIELIKQVEINVDFILLLVEQYVKKKGTGEDKDIRATIERAIHSSPSLR
NKKELIEQFVDAVSMKATVDAQWQAFVAVKQSQELEGIIAEENLNAEATR
EFIANAFRDGSIPATGTAITKILPPVSRFSKNNGHAAKKQTVLDKLATFF
ERYFGLV
>XF0633 hypothetical protein
MHSTHSVGHAASGGSENLQAAPPPLQHGQHAGQGGSTGAVPIAAPAAPQP
DWFDRVLQQAAQPHSDKSALVTITQSFINAIEQQAQQVQAEAFKLSGPIS
QHEWDHARSTQPAVIDKWFYEDVGVFVALGGTGKTTLLLFQVIHLVLGLE
LFGYEVINPGTVIILTAEDSRETLVARLRYMCAQLQLSPADVRKVQEGVI
ITDVSGKGIKLAAIESDVVVPSKFLDRFIVDASEVHPSLIIIDPMVSFGV
GESRINDSEQAMIDAARRIRNMLRCAVLYVHHTGKANARDKTLDQYSGRG
GSALADGARMVHVLQRLDPEAWTEQTGDTLEGEESGFVLARPKMTWCPPQ
PNIYLKRQHYLFERFYPVESTEGAGLVIDRDADKVFQFVKDEYLKGKKHS
QNTLIQSKLLSQARIRAAVERLKADNRLIVERITTGGQGGARSFLRPMEL
PQ
>XF2178 DNA polymerase III, delta subunit
MELRPEQLANLPANQPLEPAYLIAGPETLRLVEAADAIRTHARADGITER
EIFDVESRDFDWQQLASSFNAPSLFSSRRLIEIRLPGGKPGKEGSEVITR
FCATPSSDVILLITCNEWSKAHHGKWTDAIARIGKIAIAWTIKPHELPDW
ITRRLHSKGLRANTDVIHQLSTRLEGNLLAAAQEIDKLALLNQGPLLDLE
TMESFVADTARYDVFRLTEAMLSGQPTATIRMLGKLRAEGEAVAALLPIL
TKELIRTTTLSWVKHDNGNLAAEMKAQGIWETRQAPFKRALQRHTSPYKW
EHFVAEVGRIDRITKGRNDGNAWLSLERLMVAVAEADATRLLA
>XF1441 phosphohydrolase
MPLAQEHWQPNVTVATVVAHNQHLLLVEETIDGILMLNQPAGHLEPGESL
LQAALRETLEETGWKVRLTSLIGSYLWTSATGYTYLRFAFSAEPLTYYPQ
YPLDVGIVRALWLTPSELQTATPPLRSPLVWQVITDYLSGQQAPLDLVRY
VP
>XF2295 phage-related protein
MNLRPYQHTMVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDVAPM
LVIAPLRVAATTWPDEVAKFPHLRHLRVAVVVGSAAARRRALEQDADIYC
INYDNLKWLAEFYQDRWPFRTVVADECSKLKGFRLRQGTRRARALAKYVH
TKVERYIGLTGTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAVQ
IGSDPHAVRLVPAPNASKEIQDTIRDLCLSLDPHAYFDLRQPIVNTIRVV
LPAHAQRLYKAMEQEMFIALECGAEVEAFNAASKTIKCLQLANGALYTDD
TRQAWEVVHDAKLEALHEIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRV
LDQHPDTLRDWNAGNIPVLFAHPASAGHGLNLQDGGNILAFFGHWWAQVR
NGVLMRTCTVCGGSGTVPISERKRAAALGRDVSTYCKKWRGVYEWLLDTL
RAAEQRAAAELKAALREDAA
>XF2552 DNA gyrase subunit A
MAETAKEIIKVNLEDEMRKSYLDYAMSVIVGRALPDARDGMKPVHRRVLY
AMHELGAHSDKSYFKSARIIGEVLGKYHPHGDQSVYDTLVRMAQPFSLRY
LLVEGQGNFGSVDGDPAAAMRYTESRMSRISHDLMADIDKETVDFQPNYD
EKETEPTVMPTRFPNLLVNGSSGIAVGMATNIPPHNLVESINACIALIDN
PELDVDGLMEYIPGPDFPTAGIINGTAGIVAGYRTGRGRVRMRAKADIEV
ADNGREAIVVTEIPYQVNKARLIEKIAELVKEKRIDGISELRDESDKDGM
RIYIEIKRGESAEVVLNNLYQQTQMESVFGINMVALVDGRPQLLNLKQIL
QAFIRHRREVVTRRTIFELRKARARAHVLEGLTVALANIDEMIHLIKTSP
SPQEAKERLLAKTWAPGLVGTLLSASGGEASRPEDLPQGVGLIGDSYQLT
EVQVRQILEMRLHRLTGLEQDKLAEEYQQLLEIIVGLIRILENPDVLLQV
IRDELLKIREEYGDVRRTEIRHSEEDLDILDLIAPEDVVVTLSHAGYAKR
QPVSAYRAQKRGGRGRAAVTTKEEDFIDHLWLVNTHDTLLTFTSTGKVFW
LSVYQLPEAGSNARGRPIINWIPLEPGEKVQAVLPVREYAENHYVFFATR
QGTVKKTPLSEFAFRLARGKIAINLDQGDALIGVALTDGERDVLLFASNG
KTVRFSENTVRSMGRTATGVRGIKLTEGEEVVSLIIAEPATGVDMLEEAE
ETADDDIQTANTADSVHIDPTQDDILCILTATENGYGKCTPLAHYPRKGR
GTQGVIGIQTTERNGRLVAAVLLGATDEVLLISDGGTLVRTRGSEISRVG
RNTQGVTLIRLSNGEKLQAVERLDASLSIPDETEDDPGTVHPA
>XF0123 recombination protein RecA
MDENKKRALSVALSQIEKQFGKGSVMRMGDRVIEAVEAIPTGSLMLDLAL
GIGGLPKGRVVEIYGPESSGKTTLTLQAIAQCQKKGGTAAFIDAEHALDP
IYAGKLGVNVDDLLLSQPDTGEQALEIADMLVRSGSIDIMVIDSVAALTP
RAEIEGEMGDQLPGLQARLMSQALRKLTGNIKRSNTLVIFINQLRMKIGV
MMPGQSPETTTGGNALKFYASVRLDIRRIGAIKKGDEIIGNQTKIKVVKN
KLAPPFKQVVTEILYGEGISREGELIEMGVEAKLVEKAGAWYSYGGERIG
QGKDNARGYLRENPHLAAKLEADLREKFEPTELSREEGDEDTLEDTM
>XF0188 conserved hypothetical protein
MSGMNRPLPMIHRIEEIGDSQFRRQQLDLEFSNGERRLYQRHVARGYGAV
VVVPLLDPQTVLLVREYAAGIHRYELGLVKGRIDANETPEQAADRELKEE
AGYGARDLRVLRAITLVPGYMNHQSWLVMASDLYPERLVGDEPEEIEVIP
WKLSKLHDLMLREDFSEGRSLAALFIVREWLEHQQ
>XF0177 conserved hypothetical protein
MNVVLIDSHCHLDADAFDGDRAEIIARAQAAGIIAQVIPAVTAAKWPKLR
TICTQTSGLYPAYGLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDF
YLEGLNREMQHTYFIRQLMLAREYALPVIVHARHAVEEVIASIKTVGTLR
GVVHSFSGSLEQARQLWKLGFMISLGGAMTYPRAHRLHQLAMETPLDCLL
LETDAPYQPDSEIRGKRNEPGRLLTILDYIATLRKQDRTEISKVTRANTE
QLFGLKVTPT
>XF1041 ribonuclease HII
MVSQFDTQHLPSSNTALVAGVDEAGRGPLAGPVVVAAVVFDPSQPRINGL
NDSKQLSPACRERLYAHIVERALAYKVVMIDSTQIDTLNIYQATMLGMRL
AVEGVAHVAKSARIDGNRLPKNLPCPAEALVGGDARDRTIMAASILAKVT
RDRHMVELHLQYPHYGFDKHKGYGTPAHLAALAEHGPCLEHRRSFAPVRK
MLTLEAIHARQSTHQHNENSPTKAAFNMLLERDD
>XF1902 holliday junction binding protein, DNA helicase
MDRIIDTAATSEDEAIEVSIRPKRLADYLGQQPVREQMDIYIQATKARAE
ALDHVLIFGPPGLGKTTLSHVIAYELGVKLRVTSGPVIEKAGDLAALLTN
LQPYDVLFIDEIHRLSPVVEEVLYPAMEDFQIDIMIGEGPAARSIKIDLP
PFTLIGATTRTGLLTAPLRDRFGIVQRLEFYSPEDLARIVRRSAGILNID
CTTEGAAEIAQRARGTPRIANRLLRRVRDYAEVKAGGQITIEVAQAAMQM
LKVDQGGFDELDRRLLHTIVEYFDGGPVGIESLAASLSEERGTLEDVVEP
YLIQQGFLVRTARGRMATDKAYQHLALQPRERVSAFTDPEDLF
>XF0924 DNA processing chain A
MAHATAMASPSHSDSQDTDALLRLVLAGGRSAPRRQLLDYHGTPHAALAA
GPNAWRASGCNTMQCTRLVAPDPNAMARIQHWLATPYHHLLGWHDPDYPP
LLRHVPSPPLALFIAGNPILLWHASIAIVGSRQPSAGGLDHSYGFAQALA
ARGLGIISGMAAGIDATAHEAALSIPSGHTVAVLGTGPDVPYPARHKKLY
ARITTDGAVISEYPPGTQPRAGHFPQRNRIIAGLALGTLVIEAGARSGAL
ITARLAAEAGRAVFAVPGSLHNPMTRGCHQLIRQGATLVQDIDQILEDVA
TLAAPLAHTLRERLDAPSWPVAPSLSTPNSNDPKYHTLWQALAHDPMSMD
SLIERTGLTAATLSSMLLTLELEGKVVVEHGRYTRTA
>XF2146 ribonuclease T
MMNQSITPPTHPPMSQRFRGYLPVVVDVETGGFNWNHHALLEIACIPIEM
DDTGRLYPGEVTSTHVIPAPGTDIDPKSLEVTGIILDHPFRFAKEEKLAL
EHIFTPVRATMKKYKCQRAILVGHNAHFDLNFLNAAVTRTAYKRNPFHQF
SVFDTVTLAGMAYGQTVLARAVQAAGLDWNAADAHSAVYDAEKTAHLFCT
ITNTWPLVVAG
>XF0164 exodeoxyribonuclease
MRISSFNANGLRSALSKGFFDWFSTQDIDVLCVQETKAQRQQLVGPDFFP
AGYHVCFRDATTKKGYSGVAIYSRCEPDELRTTLGWAEFDEEGRYVEARF
GNLSVVSFYIPSGSSGEQRQHYKFEVMRWLRPILCEWLLSGRDYVLCGDW
NIVRSALDIRNWKSNQKNSGCLPLERDWLNGLCADSLHEVNAAQGRGWVD
TYRVLYPQGEDYTWWSNRGAARVNNVGWRIDYQFVSPGLRERVSRCAIYR
EQRFSDHAPYTVEYVL
>XF2528 phage-related protein
MNLRPYQHTMVDFILTHPRCNLFVPMGLGKTVATLTALDVLLVVEDVAPM
LVIAPLRVAATTWPDEVAKFPHLRHLRVAVVVGSAAARRRALEQDADIYC
INYDNLKWLAEFYQDRWPFRTVVADECSKLKGFRLRQGTRRARALAKYVH
TKVERYIGLTGTPAPNGLQDLWALMWMVDRGARLGTHFKAFIDRWFRAVQ
IGSDPHAVRLVPAPNASKEMQDKIRDLCLSLDPQAYFDLRQPIVNTIRVV
LPERARRLYKTMEQEMLIALECGAEVEAFNAASKTIKCLQLANGALYTDD
TRQAWEVVHDAKLEALHEIIEEAAGMPVLVAYHFKSDVARLQRAFPKGRV
LDQHPDTLRDWNAGNIPVLFVHPASAGHGLNLQDGGNILAFFGHWWDLEQ
YQQIIERIGPTRQAQAGHDRPVFIHHIVAAGTVDELVMARRESKREVQDL
LLEAVKRRDTCKPLTSQGAITL
>XF1966 hypothetical protein
MPATLKEFQETLCAGIVARFNQVRRVYEQLAAAPPEQWTQARCNDAVTVL
CAPTGAGKTLIAVETMRRVSATGERVLWFWFAPFSGLVEQSRQVIAAQAP
ELDVFDLQSDRCWETVRSGGVFVVTWAAVAVRNTEGRRARTNGDSGMSLD
VLLALAREEGVRIGCVVDEAHHTALSGHQARLFFQSVLAPDYALLMTATP
RDADVMAFERATGYMVGQAAEWAMVSRFDAVQAGLLKYGVRMVRFIAQDG
DAAQLIDFEHLALRQCAETHRMIKRLLADAGVALTPLMLVQVPDGRAAQD
EARRFLTEQLHFDHEAVRIHTADEPDPALLSLANDPTVEVLIFKMAVALG
FDAPRAFTLAALRGARDPAFGIQVIGRIVRKHALLQGRVTLPESLDYGYV
FLSNAQSQEGLLDAGQQINALTTQSPELGTQTVVTVIGEHSHVQVVRSGE
PLSLLVSPQGVALDAVERTSQMARDAVGDPLIEEGWEPWTRAAQGILEWV
GAQSGHPRKDAAASTASTVNALLCMGQGVLKHYRRREDAPAMLRSERLPD
PPADFEAQLMDFIDFNDTVLASRLRVRERVMRVESALFSGVQHSEEECQT
DLWATLAPVAVAEKAEQIRLRLSEANDRELQLRLLEKFRQAIVLAGSEPP
EDEEALLQQLELVLVRHPELLRVAYRRFRHAQVADVAVSLPAELHSDVPL
EKAQRGLYGVFPPGLNQDETVVAQQLDASPLVHWWHRNPVRRPESVALYR
WDDGEGFYPDFVVAMTQRNAHGQIALLEVKGAQLWGGPREVEKAAAVHPE
YGRVFIVGRQRGGRVFHHLRVLEHRLETDGVFTLDRLRHV
>XF1778 single-stranded DNA binding protein
MSTHFSGEGNIGSPPEYREFPNGNDEPRRLLRLNVYFDNPVPTKGGDFED
RGGFWAPVEIWHRDAAHWKDLYQKGMRVLVVGRMEREPWTDNEDQPRETW
QINARSVGILPFRIESVTLSPRQQETTQDTQPNPQAAQEPAAPKEPKRRK
>XF0535 transposase OrfA
MMLRRWEASGRLMAEHTVGGHRRYDMAKLPPEMFRAQLVFALCEAKNVEV
VILNQGQDTNFEEDLAKDVLEIMTVFSARLYGSRSRKNQRLLEAVKTAVE
ASPC
>XF0590 conserved hypothetical protein
MSVSQLPLALRYSSDQRFETYLHAPSGLIAQLRAVVDQCSRDWIYLVGAS
GSGKTHLALALCAAAEQVGQSVAYLPLQVAVGRLRDALEALEGCLLVVLD
GLQAIVGMREDEIALFDFHNRARAAGITLLYTARAIPDGLGLTLPDLRSR
VAQCIRIALPTLDDVGRASVLRERAQRRGLMLDEAAIEWLLSRGDRDLGS
LVMLLERLDRESLATKRRVTIPFLRHVLAEGGG
>XF2478 hypothetical protein
MNHWHAVMLKQHCGLNPNRDHVAIRKILMPTRLKETVPKVIRHTMATELR
SAGVAAQDIQGMLGHRAYGGTTDVYAKYRPDYMADAVRAIDAYMERLRVS
CVSVNKPQIAQPIDFIGGRCRVRTCDPCRVKVDED
>XF0423 exodeoxyribonuclease V beta chain
MATLVTRLVVERGWRIGHILAVTFTEAATQELRTRIRERLILAARLVPQA
AELPVPLPSAQPQIPHPTPHPQDAPRITPGVANSTSPEPPDVALTLQILR
THLAATDETPHALHSRLQQAADEIDLAAIFTIHGFCTRVLREHALHTGQS
FIPPTLLASDRDLLHELAADIWRQEIADPEAIQDLIHLWPAGAPMLAQDL
TDLLYQPHLSPAPSLEAPVALPDAALAVAETTLRHLWQTEGAALRSALHT
ALEEGVLNKKSYKADALNDLWDWMERWSLAPNAYPELHPKLQTLTVAALQ
AGTNKQGAGRTPNSPVSEAVQHYLDALTTIETARAQHRLRRLHRLRAAAR
LRLTALKRQRRVQTYDDLIQHVAQALDGPHRLALVRSLRQQYRMALVDEF
QDTDVAQWRIFHHVFGDTEHAHTADLTPALFLIGDPKQAIYGFRGGDVHT
YLAAAARAERAPPLERNFRSRPLLLRAVEALYTQAGDAAFLTPGIAFHPV
QPGTHCRDTDLSNAGVPAPALQVWQAPPPLDSTAKGKPKPWNADAARALC
TDACVHAIHQWLADAQTGRALLDGRPVGAGDIAVLVRSHREATLMQQALA
RAGIPAVAAGKRSLLTTDEANEALALLLALLHSADEGRLRTALSTVLVGL
TAETIATFDHDSVASRHWQRQALHWRERLHSGGPLGLLTDLCALHAARLL
SLFDGERRLSNYLQLGELLQQVHLRALGLHGLIDWLARRIAEAKNDDETQ
LLRLESDARRVQIVTLHKSKGLEYPLVFLPYVAIGHSHAGPGRYCVVHDA
QQGRCLHWCLDKQAPEWQRAETAWKQEQRAEEARLLYVGLTRAKHALWLA
TGTFYQTERTALWPLLGDPQAVTAQPGIVFDTAVPPAILPRLTPEQPHSV
PPARTAQRALLSDWWVYSFTQLAHAKAEPAPDAGRRIAEPLTGGQDEPAW
PQDAIQQSLPGSEVPADPRFIGIRFGVALHEVFERTDFLAWSTWRANAPV
PATERAVLLHALRGSGYVAEDVEAGVALLTPLVGHTLTSVLPEGVRLCDV
PTTERRPEIEFQFVVQATAVDALLALLHDHGLLQQRQSFGMRRRLEGLMT
GMIDLIYRHAGRWYVLDYKSNRLPDYTPAHLSVAMTNSEYDLQALIYTVA
LHRWLRFRLRDAYDYARDMGGIRYLFCRGMDATRPDAAGVYTQSFAPALI
AAVDAMFSGACP
>XF1644 single-stranded DNA binding protein
MARGINKVILVGNLGNEPDIKYTQSGMTITSISLATSSKRKDREGDTQER
TEWHRVKFFGKLGEIAAEYLHKGSQCYIEGAIRYDKFTGNDGQERYVTEI
IADQMHMLGSRNEGSSGITPQRRPAKVRNNDKASKAYAYAGDDFHDDAPP
F
>XF1909 A/G-specific adenine glycosylase
MPTRKPAYMIALYAQRLLTWFDQYGRHHLPWQHPRTPYRVWISEIMLQQT
QVAVVIPYFLRFLERFPTLPELAAADIDAVMAHWAGLGYYARARHLHAAA
KRCVELHGGDLPRDQNALQALPGIGRSTTAAILSQAWNDRAPILDGNIKR
VLSRLHGIVGWSGQSMIEKELWELAEAYVLQPPTGRLADYTQAQMDFGAT
VCTRLRPACLICPLQDGCVAWREGLTETLPTPKPSKVLPEREAVVLLLQN
DDDAILLQRRPLNGIWAALWTLPQADSEAELRIWCAQHTNADYDLAKVLD
PIVHTFSHYRVYLKPRYMRKVALHPGLENTDGLRWVTRTNLPMFGLPAPI
RKLLNEL
>XF1262 7,8-dihydro-8-oxoguanine-triphosphatase
MLLNVHMAYTPIIATLGYVLSPDQCRVLMIHRNARSGDVHLGKYNGLGGK
VEPGEDVLAGLRRELYEEAGIDCLSIRLRGTISWPGFGKQGDDWFGFVFV
IDAFQGETKTHNAEGVLEWVERQRLFELPMWEGDAKFLPLVFDDDPRPFH
GVMPYCEGRMQSWTFSRL
>XF2011 hypothetical protein
MDQPDALTELHSLAAQLERLIEYCQRLAEENHNLRCQQHQMMLERRELLA
KNEQARSRVEAMVTRLKTLEQHT
>XF1558 single-stranded DNA binding protein
MRQCDPGYIEGTIRYDKFTGNDGQERYVTEIIADQMQMLGGRDEGSSGIT
PQRRPAKARNNDKAYAYAGDDFHDDDPPF
>XF0002 DNA polymerase III, beta chain
MRFRLQRETFLKPLAHVVNVVERRQTRSILANLLIKVNEDQLSLTGTDLE
VEMISKTIIEDAESGEITIPARKIYEIVRALPDSSQLSVYQSDDKITLQA
GRSRFTLATLPANDFPSIDKIEVTERIIIPEVLLKELIERTAFAMAQQDV
RYYLNGLLFDLRDTKLRCVATDGHRLALCETELEQAKDLKRQIILPRKGV
MELQRLLEGSDRQIELEIARNHIRMKSFDVTFTSKLIDGSFPDYEGVIPI
GADREVKVAREVLRDALQRAAILSNEKYRGVRIEVSPGQLKINAHNPEQE
EAQEEIEAQTIVDGLAIGFNVNYLLDALSSLRGDFVNIQLRDSNSSALIR
ESNSEKSLQVVMPLRL
>XF0325 transposase OrfA
MMLRRWEASGRLMAEHTVGGHRRYDMAKLPPEMFRAQLVFALCEAKNVEV
VILNQGQDTNFEEDLAKDVLEIMTVFSARLYGSRSRKNQRLLEAVKTAVE
ASPC
>XF2290 phage-related protein
MDWAQFVEYARRDVAAMRDVVKRLPSHNYAGAELALWFLDQTINDRGVLI
DTDLVQAAIGAVERAKQTLAQRTEALTGGAVQAATQRDALLQHLNTAHGV
ALPDMQQHTVARCVDDPALPETVRELLSIRRQASSTSTAKYQALLHCTSP
DGRLRGTLQFNGASRTGRWAGRLFQPHNLPRPTLSQEVIAVGIDAMKAGC
VDLVFDDVMALTSSALRSCLIAPTHKKLVVADLSIIEGRVLAWLAGETPK
LHAFREFDTCQGVDGTWHSGEAITHAARRWPCNGMPSTNLSAKGRTFTSG
RMPIRSGSRPRR
>XF1892 endonuclease V (deoxyinosine 3'endonuclease)
MPVYALISDTGMMVFMKISSIDSIFAGWDGSITEARRLQSDMAERIVLKD
DLNLLSEPTLLAGFDVGFEDEGRTTRAAAVLMNACDLKLLETHVVRVPTS
MPYVPGLLSFRELPALLQALTQLSRIPALVFVDGHGIAHPRRLGIAAHFG
LVTNLPCIGVAKKRLVGDFVEPGTAFGEHTPILLHGTQVGWALRSKIRCK
PLMISPGHKISLHSALTWTQRCLNGYRLPEPTRQADRLASRRGQKIVSDL
PSLL
>XF1120 bifunctional DGTP-pyrophosphohydrolase/thiamine phosphate synthase
MTDSLRSIHVVAAVIADVRGRLLLSRRTENRDMPGLWEFPGGKREFGETS
EQALARELYEELGISADVGEWLMEVPQLYPGKRLRLEVRRVRAWKGGLRG
REGQALTWVEPDKLLRYSMPPADQPVVGMLRQPARYLVTPEPGKQDAEWL
DAVERAYRLGIERIQLRMRQHDPARWSGLVREAVQRRGRAHVEVLLNRDI
ALAEAVGIGVHLGAEQLAVLDARPLPVGLPVGASCHCLADLRHAQRIGCD
FAVLGPVLPTESHPGAVTLGWEGFEQLREQVALPIYAIGGMGADQVKEAR
RHGAQGIAAMRGLWPGGAKQ
>XF1381 DNA helicase
MPHSMQTTIRSLGSVQHNRTLCCIELPGTRAVPQKCYLPQPARSLMSTSS
ATQTVLQRVFGYDTFRGPQQAIIEHVAAGHDALVLMPTGGGKSLCYQVPA
LLRKGIGVVISPLIALMQDQVETLRQLGVRAAYLNSTLDATQAQRIEHAL
VTADLDLLYIAPERLLTAHFLSLLERSQIALFAIDEAHCVSQWGHDFRPE
YRQLTVLHERWPHVPRIALTATADPPTQREIAERLDLSDAHHFISSFDRP
NIRYTVVQKNNMRRQLQEFLGRHRNTAGIVYAMSRRKTEEIAAYLCTQGY
NALPYHAGLPVETRAKHQRCFLREEGIVMCATIAFGMGINKPDVRFVAHI
DLPKSLEGYYQETGRAGRDGEAAEAWMCYSLGDVVLLKQMIEQSEASEAR
KCVERAKLDHLLGYCESMQCRRQLLLSSFGETYPNPCGNCDNCLTPATAW
DATVLSQKALSCVYRTGQRFGVGHLIDILRGSKSQRILQLGHDQLSTYGI
GSDVDERSWRSVFRQLVATHLLEVDNEGYGGLRLTPSSRPVLKGERQVMM
RRDQFIRERDRTGQRHGLSVLPEDLALFNALHRLRAQLAKEQNVPAFVIF
HDSTLRHIAEQRPTNLNALTKISGIGNNKLTRYGHQLIELVLAQG
>XF0192 ATP-dependent RNA helicase
MNFETLGLLPSLLRALSEQGYEIPTPIQQQAIPLALAGHDLLAAAQTGTG
KTAAFGLPVLQRLMAASSNVGAGKPRALVLTPTRELATQVYDSLRGYAKY
QRVSSAVIYGGVGMGNQLDVLRRGVDLLIACPGRLIDHIERRSVDLSGVG
ILVLDEADRMLDMGFLPSIKRILGKLPRQNRQTLLFSATFAEPIKQLALE
FMCRPREVMVASHNTVAETITHRVHPVDVSRKRELLLHLLAQDSREQTLV
FVRTKHGSDKLATFLEKYGIKTAAIHGNKTQGQRLRALNSFKAGRVTVLV
ATDIAARGIDIDQLPKVINYDLPMVAEDYVHRIGRTGRNGVQGEAISLVT
QEDAKLLRQIVRLLDRDMDIRDVPDFEPQVPIRWGNSAPGKSKQPAGQHP
PRKSQHRRAFGKASVQTAHALTKQSGVQHSNGSRNRDGMFPVHQRG
>XF2059 conjugal transfer protein
MRLFIAEKPSVAKAIAGELGVTGKGEGYIECGHDTITWCFGHMLEQAEPD
AYISEDVPLNPKTGKKIWRVEELPIIPETWIMQPREDAKAQLEVIKRLLK
KATEIVNAGDPDREGQLLVDEVLEYFDCHKSVQRFWVSAQDSVSVQRGLA
ALRSNTAYQGFANAARARSRADWLIGINFSRAYTLRAQRGGSRALLTIGR
VQTPTLALVVMRDREIEAFKSIPYHTIRAAFKHEGGVFVAVWRAKEDQVG
LDPEGRLVDTVIANTLVESITGHIGKVIEYKQEPKKKAQPRAYSLSDMTL
LASNKFGYSAADVLEVCQSLYETHKLTSYPRTDCGYLPESQHADAPHVLE
AIKHVYPEVAVLVDGANQNIKSKTWDDSKITAHHGIIPTMHKGSMANLSE
KERNIYDLIVRVYLAQFYLQHEYLATTVTLEVAGERFDVGGKVVTRNGWR
DVYIEAEEEAEGESESGSNNQALPNMQNGDVVSCVKATRIDAKTKAPSRF
TEGTLTRAMENIHKYVTDAEHKKLLRDGDGIGTSATRASIISELKRRQFL
EVKGKQIVSTTLGRSMIDALPEVVKSPVLTALYERMLLSIGEGRLEVDSF
ITKQEAFIREQIAKANDGALKLNGAKESPKVSETHKCMVCGKGLVRRIGK
KTGTNFWSCSGYPTCSQTYPDAKGRPNYTIQHKET
>XF0136 DNA polymerase III holoenzyme chi subunit
MARADFYLIAKPRFLQQPLELVCALVRKAYDTNQPTLILARDQAQAEALD
DLLWAFDPDAYIPHQIAGSDEDDDITPVLIATPDSDTPSRPLVINLRDAP
WDGPCERVLEVVPADPAAREPLRERWKHYKARGLHMNKHDM
>XF2248 DNA repair protein RecO
MLIEHEVAFVLHVRPWRETSLLVEVLTQAYGRLGLIARGVQGLKKQTLRA
ALQPLQWIRFSAIQRGELGQLRQAEALDTAPRLKGEAMLASFYINELLLR
LVPRHAPVNELYLAYSQTRERLRTSDSLAWSLRLFEREILETLGVGFNLE
CDANGTPLDPATRYVLDPLEGPRRLLSEHNNAKRRDTATGHVLLALARNQ
IPNTNDLAGLRRSMRAVLLHHLGGRGLKSWEMIAAFRHQDTSP
>XF2008 conserved hypothetical protein
MRSMILWPSDFTATLTSNRSDPVLLFPTHQDFTAMNSSNNTPRVVFEGKY
QRMIVDGTWEYSERVHPGGLAAIILAVTPEERIIFVEQFRIPIQQRTIEM
PAGLVGDIDAGESIEQAAIRELEEETGWTADHAGILLIGPVSSGASSERI
AFVRATGLRKVSSGGGDVDEDIVVHEIPRTQAAAWLVQKMHAGFAMDPKL
WAALWLIDHALDGTPIK
>XF0755 exodeoxyribonuclease VII large subunit
MQHRDEILTPSQLNTLARDLLESAFPLVWIEGELGNVSRPSSGHLYVTLK
DAQAQVRCAMFKPKSQWLTFQPREGLRVLARGRLTLYEARGDYQIVLDHL
EEAGEGALRRAFEQLRIRLEAEGLFDPARKQPLPVHPRRIAVITSPSGAV
IRDIFSVLMRRFPLVEIELLPSLVQGDTAAAQITHLLRCADSSGRYDAIL
IARGGGSLEDLWAFNNEQLARTIAAAHTPVISAIGHETDFTLADFAADIR
APTPSVAAELLVPDQRALRQHLGQLQQRLLHLQQHRLDQAIQRADQLGLR
LQARNPEMHLRLLAQRQAEAGRRLEQCLHHVLDRAQGQLRNHHTRLYALN
PRQQIAGLQQHLKHLNPQQPLQRRLQQEQLRLHGLVRALEAVNPLATVAR
GYALVHRADNNTLVRDSAQVCVGDVLDTKLAHGQLRVRVEVSST
>XF0641 DNA methyltransferase
MSDGSIEVVSGTTRRKQTVSDSSQSSPQIVSADFGHAFAAYQRETSLRPL
LLNGDALAVLKSLPDECIDFAMTSPPYWGKREYENGGIGLEADYRDFVKD
LAAIFLELKRVLKPTGSFWLNIGDTYNGKGLVGIPWRVAFELTDVQGWTM
RNSVVWNKLKGGMDNSKDRLANVHENLFHFVKQPKGYYYNADAIRSKPRE
AKVVNGAVVSATGVSGVRYKRQLELSTALDENEKKAAFAALDRMLADVGA
GNVSDFRMIIRGHQRATHSDSEKVSGRAKELRDKGFYFLKYHPNGSKPGD
VWDIIPEDTQRRGAHFAPYPLDLCRRPLLATCPPGGIVLDPFCGTGTTLL
AAGNLGLKSVGIDISRHYLELSQEKCDGLL
>XF2696 ATP-dependent RNA helicase
MMSDKPLTNLNFSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDI
AGQAQTGTGKTLAFLVVVVNRLLSRPGLVNRNPEDPRALILAPTRELAIQ
IYNDAVKFGGNLGLRFALIYGGVDYDKQREMLRKGADVVIATPGRLIDYL
KQHEVVSLRVCEICVLDEADRMFDLGFIKDIRFILRRLPERCSRQTLLFS
ATLSHRVLELAYEYMNEPEKLVAETETVTTTRVRQRIYFPAEEEKIPLLL
GLLSRSEGMRTMVFVNTKVFVEGVARALDEAGYRVGVLSGDVPQRKRETL
LNRFQKGQLEILVATDVAARGLHIDGVNYVYNYDLPFDAEDYVHRIGRTA
RLGADGDAISFACERYAMSLPDIEAYIEQKIPVAAVTAELLAPLSRPERA
SNGNGDTVGDISPHSLDVLVAQEWRRGKPRGSPGERDGRPRVGKGPRSDG
GGGRRRTKFRLETERDSSVDGAVTPVFGVSTGIVSAPGKEVGRNLGRRRR
SRSMDSGESGHVVATTAQVAVKSGSQPSLLGRIGHRIRSLLNMF
>XF1980 hypothetical protein
MSRGLQHCIRACIQKLKALLSGRSQAHLAGRSFTTHSHSLPVITCSEKSC
KKNSYHYQSILRSLSKYLKDHREKQHNMPYQMSDWIFSPKPIASFQHNYG
KQCAEVRIIKPFATRCLATKIMSP
>XF1998 DNA-binding protein
MNVVPSRPEVSRGSPKSPLREHVAQVVRRYLRDLDGCDVNDLYNMVLHEM
EIPLLVEVLNHCEGNQSRAAALLGIHRATLRKKLKEYGLV
>XF0071 formamidopyrimidine DNA glycosylase
MPELPEVETTLRGLLPYLTNQLIYSLTLRRRTLRWDIPSHIESRLPGHRI
TTVCRRAKYLLIDTNAGGSLIIHLGMSGTLRLLAPETPLRPHDHVDIMLN
NRRVLRFNDPRRFGCLLWQEDGQIHPLLQRLGCEPLSDSFNGDYLYQCSR
ARNVSVKTFLMDQRIVVGVGNIYAAESLFRAGISPLCEADKISLQRYRRL
AEVVKDILLYAINRGGTTLRDFLSPDGRPGYFKQELFVYGRQQQPCKQCG
SLLRQTTIRQRTTVWCGHCQG
>XF2227 conserved hypothetical protein
MPEASSPFPDGIVLGFDVGTRRIGVAVGSAWGAGARAVAVIDVHGVAVDW
NALDRVKRNWLPVGLVVGDPLTLEGHDQPIRKQAQAFACQLRERYRLPVV
LVDERSSSVEAASRFAGARAAGYKRRRDADTLDAIAAAVILERWLADPMQ
ATSLP
>XF0148 DNA repair protein
MRSRYPTQMHINNWPTHERPREKLLAHGAATLSDAELLAIFLGSGLRGHD
AVQTARNLLHTHGPLRELLDRPPGDLMRLPGLGLARACKLTAALELSTRH
LAAALQRGASIHDPISAGRYFAQRLRANPNEVFAVLFLDNRHRAISFEEL
FHGTINGAEVHPREVVRRALTLNAAAVIVGHNHPSGNREPSPADRMITQR
LKNALDLIDVRLVDHFVIGDGAPVSFAEHGWL
>XF1913 type V secretory pathway protein
MQLIDIGANLTHESFDYDRDAVLQRAYEAGVVQMVVTGSNRTHSSLALLL
AQRHPGLLYATAGVHPHCAAEYTDECDAELRMLHAHKEVVAVGECGLDYF
RDFCPHRTQQHAFERQLQLASENGKPLFLHQREAHNDFMAIMRGFQGRLG
PVVVHCFTGTGEELFDYLDHDWYIGITGWLCDERRGMHLRELVRHIPEKR
LMIETDAPYLLPRTLRPLPKDRRNEPAFLPHIVTELARNRGEDVVTCAAR
STVVAREFFSLPEAGSGS
>XF1642 phage-related integrase
MGRKPTKAGAIPRFRVRPQKSGVVHYYYDHGGKPRKETPLGRDYGLAIKR
WAELEHAQITPAIAVTFRHVAERYRAEVIPTKAHNTQRMHHIYLNYLLQF
FDDPPAPFESIKPVNIRQYLDWRTSKVSANREVALFSHLWNWARSKGITD
LPNPCAGIRRNKESGRDVYIDDATYHAVYQAADQTLRDAMDLAYLTGQRV
SDVVSMDERHIVNGALEICQAKTGVKLAIAITGELAILIKRILARKRGMK
LRSTRLIVDEKGLGLNWKKLAYRFRKVRAAAGIAKEVFQFRDLRAKAATD
KADLAGDMRQAQAQLGHASVVMTEHYVRKRKGAKVTPTR
>XF1807 DNA polymerase III subunit
MSYLVLARKWRPKRFAELVGQEHVVRALSNALESGRLHHAFLFTGTRGVG
KTTIARIFAKSLNCEQGTSADPCGRCTACLDIDVGRYIDLLEIDAASNTG
VDDVREMIENAQYMPSRGKFKVYLIDEVHMLSKAAFNALLKTLEEPPPHV
KFLLATTDPQKLPVTVLSRCLQFNLKRLDEEQIQRQIAKILTAEQITADD
AAIIELSKAADGSLRDGLSLLDQAIAYAGGVLREGAVRDMLGTVDRTQVE
VMLAALIAGDGDRLLRVIATLAEFSPDWGGVLEALAEALHRIQVQQLVPS
VVFAGDGLNVALLAEQTQPEVVQLWYQMAINGRHDLHLAPSPRVGFEMAV
LRMLAFRPVPVVAPDLISAEGHGQSVDAPLMASVGRDAHGANGYTMSQSR
SDLQSALLQTSIAVPPMGGDDIRMGKSSLLRSTAVAPHQLENVSVWAEQS
VLSSSEGAMERVPLTTEVNKVGVGSLDGKITDVGQWLALVERIELSGPSK
QLAAHAAFVSHENNVLCLALDPEFEYLQSTRSVADLTQGLTRLLGQAPEV
KIEARNIQVETLHERTYRQKSERQQLAEEAFMSDHVVQHLIYQQAAKVVT
DSIRPYDE
>XF0968 hypothetical protein
MQERPGQIGKYWLSRRADSKNWYRTWCESATRRTKRASLGTTDIQEAKIS
LYLWYAKHGDVSKQTPQDILLDLVLTRYWEQHAQNTTSAESAKAALNRAY
KEGEITSVPYIIPGKDAPPRDQVLSLQESAALWEAATLSHERMYLALAYG
TLARPEAILGLRREFADIQRRLLTQNLPGRKQTKKFRPVVPICDFLLPWI
LSVDSGPLVHWHGKPIASFKTARRALRTHAGLPKDTVPKVIRHTMATELR
SAGMAAQDIQGMLGHRAYSGITDIYAK
>XF0425 exodeoxyribonuclease V alpha chain
MSLLAALNQAGVLRTLDDALARSLCRLDPKTPDKVAAAAALASMAVAHGH
AGVDLAHPGLLAGEMFDWPSAADWVHLLRASRWVAEPSEGEAPAPTGQPL
VLEQGVLYLRRYREYERRLAIGLRRIAAARLPPAESAAVATVFAALFPQA
RAGQDRQASAAALALQRALLLVTGGPGTGKTTTIARLLLLRVAQARQQGQ
ASLRIALAAPTGRAAERMAESLRAAAGYVSAAGGDAALFAALPSGASTVH
RLLGVIPDTPRFRHCEDNPLPYDVIVVDEASMMDLPLMCKLVDAVADGTQ
LILLGDPDQLPSVEAGDVLAGILAAAGSGEVLDAADAQALAPLLGAPSAA
VVAECHVVRGGLHGHRMHLQHSHRQGEDLALAPLAEAVRLGDATAVLGML
RRGTLRGVQFHEGVLDPCVGAGQVLLAHWRALAALSDPVQALAVARRLRL
LTALREGPQGAAGINARIERLLGGGGVDGYFHGRLLLMTETSPRQRLFNG
DIGVCLRDEDGTMWAWFSGAGGEGVRAFAPATLPAHESAFAMTVHKAQGS
EFDTVWLQLPRQESRVLSRELIYTGLTRARHALHVAGSESVLCAALARQA
VRVSGLAWRLGVTGCNTVPIGAGAGDAEVFGKGGQGVLF
>XF2288 phage-related integrase
MRPKSSHKDLPPKMLRRTRVLKSGKVWESFYYNGRTTEGRRVEIPLGGDL
NEAKRQWAELECCKAPVETEVLGFIFDRYLREVAPTKARATRYQIKSCMT
TLRKVFGDVNIHTVTPQQLAQYRDKRARTAPVLANRELSVFSSVWTMARE
WGYTNKENQVKGIRKIKEKPRDFYADAAVWNAVYAKACEELKDAMDLAYL
TGQRPADVLKMRFTDIRDGSLEVQQNKTKKKLRILLESEGIRTELGKVID
RIKARKRKVIGFSLVSTSKGVGLGSKPLRVRFQRARVAAAKAASESGEVD
LAKRILIFQFRDIRPKAASELPLEHASKLLGHTQQQITQRVYRRVGEVVK
PTK
>XF1453 conserved hypothetical protein
MRPRTLHEMVGQKRLLAPDRALHRAVASGHVHSMILWGPPGCGKTTLSLL
LAQYIDAEFHAVSAVLSGLPEVRQILAEAAQRFSEGRRTVLFVDEVHRFN
NMQQDAFLPHIERGSIIFVGATTENPSFELNSALLSRCRVHVLEAVSSQD
IVVALQRALQDTERGLGEQKIEVSEASLLEIAKAADGDVRRALTLLEIAA
ELAQDEDGQMTADLLSQVLADRSRRFDKRGEQFYDQISALHKSVRSSNPD
AALYWLLRMLDGGCDPIYLARRLTRMAIEDIGLADPRAQSMALEAWDIYE
RLGSPEGDLAFAQLVLYLASTAKSNAGYVAFNVAKEDIRQTGTQDVPLHL
RNAPTRLMKSLGYGIEYQYDHDAENGVALEQTCFPDALGERIYYQPVSRG
LEIKLKEKLDQLRAARAQIQADKPQRPRA
>XF1859 hypothetical protein
MGIQNMSCERSEALLGPSGENVSHVYTEGQRSQAERPSFGPSSNTGQKGE
WDCLGMRQDDFDSSRLACVDFLTVVMSRDLLQQCGYLDESKFLLSLLFNL
DPKYISIGKHTSNRWHFYSSSASIFDHNGDVVGKLGWDGNNDSFCISLSG
AACRYIRDWSKVISVLQSVGARITRCDVAYDDYQGELGTVRHHEAQAREN
LAPSGGCLLFASGGTPPRTRFLDDHGGGSGCTLYVGQKGHKQLCIYDKGK
QLGSPDSPWVRYEVRFYGKHAVIPLDILVDSFRYLRGSYGYLDSLLSRVV
SSVSSRIHCVVKHVEASGVAMVRWLRRQAGPAISLLRQSLGESFNDFIAQ
YIERSGFPSRFRRMCSRVQLPTYFRESLAMHPGFSEVSNVAA
>XF0743 integration host factor, alpha subunit
MALTKAEMVERLFDEVGLNKREAKEFVDTFFDLLRDALEQGRQIKLSGFG
NFELRCKNQRPGRNPKTGEEIPISARTVVTFRSGQKLKERVDAYVGSRQ
>XF0480 hypothetical protein
MPRPRKYHPSIPPHIDQSKIPKGIYWGDGRWYTLIPHPEGGRHQKRTIAG
RGARLSDLHAIIEQQHTGNVKGTVSDVFNQFHHSSEFAGLAKATQKDYQW
CAQTIQSFLLKDNTTLGSKAVNRLNVPTWQRLVEVIAQGRPAQGDCEAIQ
PAPSKANHMLRYARRAFAWGIRHGHCTTNPAHGVKQAKERARYRMPDLKT
FTAIHAFAAERGQYQAHRIGSVAPYLAAAMTFAYGLRLRGIEVCTLTDAH
HKPEGILSNRRKGSRDNITRWNDELRSAWDWLVQYRAARWSSHKRATPLR
PENRFLFVNQSGARLSKSSLDTAWQRMIVMAIMEGVITEEERFSLHGLKH
RGITDSEDKRSGGHRTEAMRERYNHEVPIVEPPKKPEFSR
>XF2022 exodeoxyribonuclease I
MQYHYSTHSSPQILRTMPPNFLFYDLETFGQDPRRTRIAQFAAVRTDTEL
NVIEEPISFLVKPADDLLPSPDATLITGITPQHAQREGINEAAAFTHIAM
QMTRPHTCSLGYNTLRFDDEFIRYGLFRHFYDPYEREWRNGNSRWDLLDM
LRLMHALRPEGIHWPTREDGAPSFKLEHLALANHAREGAAHEALSDVYAT
ISMARKFRTAQPRLWNYALQLRDKRFCATLLDITSIQPVLHISQRYPATQ
HCAAAVLPLTTHPHINNRIIVFDLNGDIDTLLRLSAEDIADRLYTPTVDL
PEGEQRIPLKEVHLNKVPALIAWNNLRASDFTRLGLDADMLETKAAQLRA
CGPDLAEKVRHVFSHTYNTANDADASLYDGFLTEEDRRRLPQLRASPPDT
LATFEQHLRDPRLIELLFRYRARNFPETLSCDEQTRWDTYRRHRLTTDAG
LSELTLDQYHAQIAELRMTHSEDVAKQLLLDQLASWGSELSCTL
>XF1776 DNA topoisomerase III
MTRRSSAGRWSSCPLFRSSGGSRSNRRPPRNSKVVKALLAKATHLVIATD
ADREGELIAREIIDLCGYRGPIERLWLSALNDASIRTALGKLRPSSDTLP
MYYSALARSRADWLVGMNLSRLFTVLGLQAGYDGVLSVGRVQTPTLKLVV
DRDREIAAFKSVPFWAIDVSLSAGGQAFSAQWVPPDGCTDDAGRCLQQPI
AQQAAQQIRAASSAQVVSVETERVREGPPLLFDLGTLQEVCSKQLGLDVQ
ETLEIAQALYETHKATTYPRSDSGYLPESMFAEVPTVLDSLLKTDPSLRP
IMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPANLSAMSEKELAVYRLIRA
HYLAQFLPHHEFDRTIAELSCGQQKLVATGKQVAAQGWHLVLAEPQADED
GETTARSQVLPALREGLACQVAEAEVKALKTLPPKPYTQGELVKSMKGVA
RFVTDPRLKQKLKDTTGIGTEATRANIITGLLTRGYLVKKGRSIRASDAA
FTLIDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLIV
QYGSTSLSIKVPQGPACPQCGAPTRQRTGKTGPFWSCSRYPDCKGTLPVD
SGTSKRGASRPRSSGRKGS
>XF1383 helicase, ATP dependent
MYCHAIFCNLRLMSVIEQNILGQLRQHRRAIDDAMTRDRGRLLGLWSRWQ
SQPRDHEARANFQRVLSASRAQRQVRENNQPVVTVDTRLPIAQEAERIVA
LMRAHPVVIIAGETGSGKTTQLPKLCLSAGRGIAGTIGCTQPRRIAARAV
ATRVAEELQTPLGMVVGFQVRFTEKVSDASRIKFMTDGILLAEVASDRWL
SAYDTIIIDEAHERSLNIDFLLGYLKQLLKKRADLKVIVTSATIDTARFS
KHFDDAPVIHVAGRTYPVEVRYRPLDAMWASDDRPGEPYGGTESPAVNRW
VGGSGGDGALSKPIEVVPQEDQRTVNDAIVAVIDEITREDPHGDVLVFLP
GEREIRELYRVLERRKYRETELLPLYARLSARDQDRVFNPGSGRRLVLTT
NVAETSLTVPRIRYVIDPGYARVKRYSARQKLDRLYIEPISQASANQRAG
RCGRIADGVCYRLYSEEDFLARSAFTDPEIRRSSLAGVILRMLQLGLGRI
GGSAASLSEPVSGPEQQHTSWIIESFSFLEPPDERAVADGWQQLVELGAV
DSQHALTAIGREMARLPVDVKLARMLVAARQHGCVYEMTVIAAFLGVQDP
RERPPDAREAADNAHAKFADARSEFVGILRLWEAYRQIRGHMTQSKLRQW
CQRHFLGFLHMREWCELQLQLSLLCAGEQAEQPRKGRVAAAFPKEGCLPS
QRSKPGAEAGKVNELPSSATVLQALLAGQGTSTQSEHRGHTPSRGQLHRA
ARLARERSAVPKVTQNTQSVKAVAGQSVSHAGMQAQFAVPPNDAPHIGER
ERAAAYQALHRALLTGLPIQIGHRTEKGDFQAPRQRRFMLFPGSMLAKKP
PPWVLAANLLDTQKVWGLTNAAIEPDWVIAELPHLLLRKHFNPYWSRTQG
RVLVSEQISLFGLLLAPKKPMHYGRIDPVAAHDLFVRQGLVMGEINTRAG
FVADNLKVLEQAHEEEAKLRRAGIVADEDWQARWYFDRVPSDIHTADALD
SWWKGLPVEKRHGLYWSLIDLLPGEGGEEDRYPKYFALGDVRLPLHYSFD
PGAVDDGVTLDVPLHLLNALDPVRLSWLVPGFVADKAAALIRSLPKALRR
SYVPAPDFAHAFAQAFQQPSADEMRGELARFLSRITGVRVAAIDFDEQTL
EPYLHLRVRLHDESGQVLAESRDFDALRARFGSHSGEAFVARAGRTLIME
ELREFPAVSIPLQLTGEAGVPMYPALVDDGEMAVLRIFADPTEAAQVHPH
GVRRLLEIALANKIKQARKQLPVSSKSGLLYAAIESKECLRDDLVKAALN
AVLAHGLESIRDPVAFAQCRDVAAQQLFSEAMARLSLAEEILAAVAELKP
LLEAPLMGWARGNLDDMERQLAQLVYPGFLRQTPADVLTQYPRYLKAMMM
RSERAKRDPSRDQARMLELKPFLDALEVAMAQGVSDTPGWETLRWDVEEL
RVSLFAQELGVRSGISVKKLAQRLSTLR
>XF2343 recombination protein N
MLRHLTIKDFAVVRNIELEFGPGMTVVSGETGAGKSLIIDALGFLSGLRA
DSSVVRHGAERAELSAEFNITIHHPARVWLRNVELDDADQCQLRRIIRAD
GGSRAWINARPVTLSQLSDLATHLVEIHGQHEHQTLLSRQSQLVLLDAYA
QNETERDAVQQAAAHWQALLDERDALQAQGDMSERINFIEHQLTELQREN
LDPATITALDASHRRQAHTAALIEACKNTTQTLNGDDTTSALHLLHAARH
TLSRVTEHDARLGEVETLLDNAMIQVDEALTLLDRIHNDLNIDPEQLEAI
ELRIGRLHSLARKYRCTPLDLAAQRDRMAAEVESMRNMDIHLQQLDHRIS
NAMTKWRQAAEKLSISRTRAAAALSTTTTNLINELGMGGGQLLIQLQPHE
NNRPHPNGAERTEFLIATNPGQPPRPLRKIASGGELSRVSLAIMVAALGL
DTVPTMVFDEVDTGIGGAIADIVGQKLRALGEQHQVLCVTHLPQVAAKGH
THYRVSKIPIDGITQSAICLLDSQERQEEIARMLGGVHISKEAHAAAGKL
LQELQEM
>XF2291 phage-related protein
MTKEQRQIGKVQELALGYGGGVGAFAAFAALYHIDLEAMAAQAVFPPLLL
QEATELLEWTKANHRPTFDLSDRAWLACDVFKRAWRNAHPAIAAFWQALQ
FAVTDAIHHPETTHTCCGITVQYRRAWLRLRLPSGRVLYYAAPRVDEHGA
LSYMGTHPITRKWTRLTTYGGKLVENITQAVSRDVLAACMPAIEAAGYSI
VLTVHDEIITEADDHPCFNAAHLAALMATPPPWAEGLPLAAEGFDTYRYR
KQ
>XF2409 conserved hypothetical protein
MPALGYLHVDGLCQKSSGGSRYNLYEAETIAAWLAEHHESLQAQYGEPLH
RIVGILTPFETQARAISQACRDVGIEVGHEKDGITVGTVHALQGAERPVV
IFSAVYSKHADGGFIDQRASMLNVAVSRAKNTFLVFGDMDVFTAAPKSRP
RGLLAHYLFKDPSNALCFQPLVRKDLQQVSTAVEVLQDAAEHDAFLLQAL
NKVQREIHIVSPWINKDRIQDIGAFKAMQEAVERQVQVTVYTDQDLNTDD
KKDTKKIAEVLQAARALRGVGIEVHFVDRVHSKMVIGDDEVFCVGSFNWF
SANRSAMYAKHETSLVYRGRGLADERQTRLNSLRQRITDDPQQVGQA
>XF0393 conserved hypothetical protein
MIDPDGYRPNVGIVLMCRDGQVFWGRRVRLDGWQFPQGGMHSDETPVEAM
YRELNEETGLLPEHVQLLGATPGWLRYRLPSQAVRCNRSQMCIGQKQVWF
LLQLIGDESHVQLDQSENPEFDHWRWVSFWYPIEHVVMFKRGVYARALCQ
LASLAQQVVGLEVGTMPQYVQDICLLNVGYKHLPNWVSRY
>XF0683 phage-related DNA polymerase
MATAQPPAPILWGDLETYSPVPMAHGVHAYAEHAELLLFAYALGEGPVQV
WDCTATATLPDDLSAALHDPAVLLYFHNSHFDRTVLRHCGIDIPLERWRD
SMAQALAHSLPGALGTLCELLRVPVEHAKDKDGKRLVALFCKPRPAHCTL
RRATRDTHPTDWAQFVEYAQRDVAAMRDVVKRLPSHNYAGAELALWFLDQ
TINDRGVLIDTDLVQAAIRAVERAKQTLAQRTEALTGGAVQAATQRDALL
QHLNTAHGVALPDMQQHTVARCVDDPALPETVRELLSIRRQASSTSTAKY
QALLHCTSPDGRLRGTLQFNGASRTGRWAGRLFQPHNLPRPTLSQEVIAV
GIDAMKAGCVDLVFDDVMALTSSALRSCLIAPKNKKLVVADLSNIEGRVL
AWLAGETPKLHAFREFDTCQGVDGTWHTGAAITHGALRGAPIALQRNADH
APIRRGDDIYKRAYAHSFGIAPQAVSKEQRQIGKVQELALGYGGGVGAFA
AFAAMYHIDLEAMAAQAALPPLLLQQATELLEWTKANHRPTFDLSDRAWL
ACDVFKRAWRNAHPAIAAFWQALQFAVTDAIHHPETAHTCCGITVQYRRA
WLRLRLPSGRVLYYAAPRVDEHGALSYMGTHPITRKWTRLTTYGGKLVEN
ITQAVSRDVLAACMPAIEAAGYSIVLTVHDEIITEADDHPCFNAAHLAAL
MATPPPWAEGLPLAAEGFDTYRYRKQ