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2024-05-21 19:12:40

Gene list

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COG category: Replication, recombination and repair
Organism: Streptococcus pyogenes SSI-1, SSI-1

Number of genes found: 132

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Streptococcus pyogenes SSI-1, SSI-1
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
SPs0001 chromosomal initiator proteinRecName: Full=Chromosomal replication initiator protein DnaA; chromosome CDS232 1356 + 0.332596
SPs0002 putative DNA polymerase III beta subunitRecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS1742 1137 + 0.334213
SPs0006 putative transcription-repair coupling factorRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS5237 3504 + 0.354167
SPs0017 conserved hypothetical proteinRecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS27791 756 + 0.312169
SPs0033 putative Holliday junction DNA helicase, subunit BRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS48604 999 + 0.396396
SPs0086 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0086; chromosome CDS99957 954 + 0.381551
SPs0095 putative single stranded DNA-binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS106501 396 + 0.381313
SPs0126 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0126; chromosome CDS140230 879 - 0.382253
SPs0149 putative putative DNA-directed DNA polymerase IRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS166556 2643 + 0.423004
SPs0193 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0193; chromosome CDS210392 825 + 0.426667
SPs0194 conserved hypothetical proteinRecName: Full=Ribonuclease M5; EC=3.1.26.8; AltName: Full=RNase M5; AltName: Full=Ribosomal RNA terminal maturase M5; chromosome CDS211209 570 + 0.45614
SPs0259 putative DNA polymerase III epsilon subunitSubName: Full=Putative DNA polymerase III epsilon subunit; chromosome CDS286383 366 + 0.407104
SPs0272 putative DNA-damage-inducible protein PRecName: Full=DNA polymerase IV; Short=Pol IV; EC=2.7.7.7; chromosome CDS300640 1098 + 0.419854
SPs0274 putative exodeoxyribonuclease V alpha subunitSubName: Full=Putative exodeoxyribonuclease V alpha subunit; chromosome CDS302406 2454 - 0.412388
SPs0276 putative ribonuclease HIIIRecName: Full=Ribonuclease HIII; Short=RNase HIII; EC=3.1.26.4; chromosome CDS305521 903 - 0.370986
SPs0279 putative DNA mismatch repair proteinRecName: Full=Endonuclease MutS2; EC=3.1.-.-; chromosome CDS307576 2349 + 0.368668
SPs0283 putative A/G-specific adenine glycosylaseSubName: Full=Putative A/G-specific adenine glycosylase; chromosome CDS311639 1155 - 0.38355
SPs0286 putative single strand binding protein (phage associated)RecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS313739 492 + 0.428862
SPs0290 putative excinuclease ABC subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS316672 2859 + 0.426373
SPs0315 putative ATP-dependent DNA helicaseSubName: Full=Putative ATP-dependent DNA helicase; chromosome CDS353223 2016 + 0.371032
SPs0352 putative transposase, IS1548SubName: Full=Putative transposase, IS1548; chromosome CDS388858 1134 - 0.380071
SPs0408 putative integraseSubName: Full=Putative integrase; chromosome CDS446427 1089 - 0.371901
SPs0422 putative DNA polymeraseRecName: Full=DNA polymerase; EC=2.7.7.7; chromosome CDS453718 1923 + 0.451898
SPs0425 hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0425; chromosome CDS458661 1329 + 0.413093
SPs0429 terminase small subunit (g1p)SubName: Full=Terminase small subunit (G1p); chromosome CDS461064 453 + 0.415011
SPs0442 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0442; chromosome CDS469889 456 + 0.368421
SPs0463 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome CDS493656 1344 + 0.418899
SPs0476 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0476; chromosome CDS508283 1155 + 0.398268
SPs0489 putative primosomal replication factor YSubName: Full=Putative primosomal replication factor Y; chromosome CDS520305 2412 + 0.387231
SPs0501 putative late competence protein required for DNA uptakeSubName: Full=Putative late competence protein required for DNA uptake; chromosome CDS533736 1065 + 0.369014
SPs0507 putative integraseSubName: Full=Putative integrase; chromosome CDS545636 1167 - 0.352185
SPs0519 hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0519; SubName: Full=Putative uncharacterized protein SPs0890; chromosome CDS550197 483 + 0.329193
SPs0521 putative helicase (phage associated)SubName: Full=Putative helicase; SubName: Full=Putative helicase (Phage associated); chromosome CDS551462 1230 + 0.390244
SPs0547 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0547; chromosome CDS569059 459 + 0.411765
SPs0553 hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0553; chromosome CDS578616 420 + 0.352381
SPs0554 putative holin 2SubName: Full=Putative holin 2; chromosome CDS578938 333 + 0.378378
SPs0597 putative integrase (phage associated)SubName: Full=Putative integrase (Phage associated); chromosome CDS625070 1155 - 0.374892
SPs0609 conserved hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0609; chromosome CDS631166 414 + 0.362319
SPs0614 putative single strand binding proteinRecName: Full=Single-stranded DNA-binding protein; chromosome CDS633367 420 + 0.419048
SPs0616 hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0616; chromosome CDS634082 354 + 0.370057
SPs0647 hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0647; chromosome CDS655918 717 + 0.410042
SPs0673 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0673; chromosome CDS681140 540 + 0.381481
SPs0698 putative mutator proteinSubName: Full=Putative mutator protein; chromosome CDS706021 456 - 0.392544
SPs0703 putative deoxyribodipyrimidine photolyaseSubName: Full=Putative deoxyribodipyrimidine photolyase; chromosome CDS711110 1410 + 0.37305
SPs0706 putative exodeoxyribonuclease VII large subunitRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS715606 1341 + 0.422819
SPs0707 putative exodeoxyribonuclease VII small subunitRecName: Full=Exodeoxyribonuclease 7 small subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit; chromosome CDS716924 216 + 0.347222
SPs0711 putative DNA repair and genetic recombination proteinRecName: Full=DNA repair protein RecN; AltName: Full=Recombination protein N; chromosome CDS719310 1662 + 0.393502
SPs0716 putative histone-like DNA-binding proteinRecName: Full=DNA-binding protein HU; chromosome CDS724653 276 + 0.405797
SPs0717 putative integrase (phage associated)SubName: Full=Putative integrase (Phage associated); chromosome CDS725017 1143 - 0.354331
SPs0724 conserved hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0724; chromosome CDS729254 387 + 0.364341
SPs0729 putative recombinase (phage associated)SubName: Full=Putative recombinase (Phage associated); chromosome CDS730595 927 + 0.378641
SPs0733 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0733; chromosome CDS732873 396 + 0.373737
SPs0765 hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0765; chromosome CDS755013 432 + 0.368056
SPs0779 putative recombination proteinRecName: Full=Recombination protein RecR; chromosome CDS766837 495 + 0.414141
SPs0784 putative ATP-dependent RNA helicaseSubName: Full=Putative ATP-dependent RNA helicase; chromosome CDS772942 1620 + 0.417284
SPs0786 conserved hypothetical proteinRecName: Full=UPF0213 protein SPs0786; chromosome CDS776712 279 - 0.362007
SPs0789 putative competence proteinSubName: Full=Putative competence protein; chromosome CDS778814 663 + 0.371041
SPs0791 putative DNA polymerase III delta subunitSubName: Full=Putative DNA polymerase III delta subunit; chromosome CDS781771 1041 + 0.366955
SPs0809 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0809; chromosome CDS801381 294 - 0.377551
SPs0817 putative RNA helicaseSubName: Full=Putative RNA helicase; chromosome CDS812274 1086 - 0.392265
SPs0822 putative DNA polymerase III gamma/tau subunitSubName: Full=Putative DNA polymerase III gamma/tau subunit; chromosome CDS815927 1674 + 0.408005
SPs0843 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0843; chromosome CDS841425 246 - 0.369919
SPs0846 putative transposase, IS861SubName: Full=Putative transposase, IS861; chromosome CDS844454 807 - 0.395291
SPs0847 conserved hypothetical protein, IS861 associatedSubName: Full=Putative uncharacterized protein SPs0847; chromosome CDS845281 429 - 0.375291
SPs0862 putative excinuclease ABC subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS859371 1992 + 0.394076
SPs0877 putative integrase (phage associated)SubName: Full=Putative integrase (Phage associated); chromosome CDS878690 912 - 0.341009
SPs0890 hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0519; SubName: Full=Putative uncharacterized protein SPs0890; chromosome CDS885614 483 + 0.329193
SPs0892 putative helicaseSubName: Full=Putative helicase; SubName: Full=Putative helicase (Phage associated); chromosome CDS886879 1230 + 0.390244
SPs0908 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs0908; chromosome CDS895757 468 + 0.376068
SPs0926 hypothetical protein (phage associated)SubName: Full=Putative uncharacterized protein SPs0926; chromosome CDS910378 720 + 0.404167
SPs0950 putative excinuclease ABC subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS933339 1797 + 0.371731
SPs0978 putative DNA repair proteinRecName: Full=UPF0758 protein SPs0978; chromosome CDS962341 681 + 0.320117
SPs1009 putative DNA gyrase A subunitRecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS993300 2487 + 0.400483
SPs1017 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1017; chromosome CDS999764 441 - 0.376417
SPs1019 putative ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS1001261 792 + 0.419192
SPs1020 putative DNA processing protein (Smf family)SubName: Full=Putative DNA processing protein (Smf family); chromosome CDS1002156 798 + 0.397243
SPs1021 putative DNA topoisomerase IRecName: Full=DNA topoisomerase 1; EC=5.99.1.2; AltName: Full=DNA topoisomerase I; chromosome CDS1003059 2130 + 0.384038
SPs1039 putative integrase/recombinaseRecName: Full=Tyrosine recombinase XerS; chromosome CDS1023051 1071 - 0.378151
SPs1101 putative ATP-dependent DNA helicaseSubName: Full=Putative ATP-dependent DNA helicase; chromosome CDS1086231 2319 - 0.410953
SPs1113 putative DNA polymerase III alpha subunitRecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS1101462 3111 - 0.376406
SPs1148 putative integrase/recombinase, XerC/XerD familySubName: Full=Putative integrase/recombinase, XerC/XerD family; chromosome CDS1133221 576 - 0.359375
SPs1157 putative GTP-binding proteinSubName: Full=Putative GTP-binding protein; chromosome CDS1138313 579 - 0.455959
SPs1160 putative DNA polymerase III delta prime subunitSubName: Full=Putative DNA polymerase III delta prime subunit; chromosome CDS1139879 1356 - 0.401917
SPs1172 putative integrase (phage associated)SubName: Full=Putative integrase (Phage associated); chromosome CDS1146302 1242 + 0.355878
SPs1175 hypothetical proteinRecName: Full=CRISPR-associated endonuclease Cas1; EC=3.1.-.-; chromosome CDS1148741 870 - 0.356322
SPs1203 putative 7,8-dihydro-8-oxoguanine-triphosphataseSubName: Full=Putative 7,8-dihydro-8-oxoguanine-triphosphatase; chromosome CDS1186408 477 - 0.396226
SPs1210 putative endonuclease III (DNA repair)RecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS1192591 657 - 0.395738
SPs1211 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1211; chromosome CDS1193244 684 - 0.355263
SPs1213 putative single strand DNA-specific exonucleaseSubName: Full=Putative single strand DNA-specific exonuclease; chromosome CDS1194676 2211 - 0.421529
SPs1228 putative DNA topoisomerase IV, subunit CRecName: Full=DNA topoisomerase 4 subunit A; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit A; chromosome CDS1208591 2466 - 0.40146
SPs1229 putative DNA topoisomerase IV, subunit BRecName: Full=DNA topoisomerase 4 subunit B; EC=5.99.1.3; AltName: Full=Topoisomerase IV subunit B; chromosome CDS1211141 1950 - 0.416923
SPs1232 putative uracil DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS1215324 654 - 0.428135
SPs1271 putative transposase chromosome CDS1255401 120 + 0.316667
SPs1285 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1285; chromosome CDS1267798 3027 - 0.359101
SPs1336 putative DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1323498 1815 - 0.384573
SPs1340 putative ATP-dependent exonuclease, subunit ARecName: Full=ATP-dependent helicase/nuclease subunit A; EC=3.1.-.-; EC=3.6.4.12; AltName: Full=ATP-dependent helicase/nuclease AddA; chromosome CDS1327201 3462 - 0.363374
SPs1341 putative ATP-dependent exonuclease, subunit BRecName: Full=ATP-dependent helicase/deoxyribonuclease subunit B; EC=3.1.-.-; EC=3.6.4.12; AltName: Full=ATP-dependent helicase/nuclease RexB; chromosome CDS1330830 3216 - 0.348259
SPs1363 putative DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS1352645 1959 - 0.404798
SPs1378 putative DNA gyrase B subunitRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS1371952 1953 - 0.397849
SPs1380 putative integraseSubName: Full=Putative integrase; chromosome CDS1374912 216 + 0.375
SPs1396 putative ATP-dependent DNA helicaseSubName: Full=Putative ATP-dependent DNA helicase; chromosome CDS1391332 2502 - 0.381295
SPs1461 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1461; chromosome CDS1460998 303 - 0.379538
SPs1464 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1464; chromosome CDS1462662 1371 + 0.362509
SPs1507 putative formamidopyrimidine-DNA glycosylaseRecName: Full=Formamidopyrimidine-DNA glycosylase; Short=Fapy-DNA glycosylase; EC=3.2.2.23; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase mutM; Short=AP lyase mutM; EC=4.2.99.18; chromosome CDS1509946 828 - 0.423913
SPs1519 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1519; chromosome CDS1518675 477 - 0.415094
SPs1523 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1523; chromosome CDS1521231 576 - 0.420139
SPs1544 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1544; chromosome CDS1540263 555 - 0.405405
SPs1561 putative 3'-exo-deoxyribonucleaseSubName: Full=Putative 3-exo-deoxyribonuclease; chromosome CDS1563709 942 + 0.426752
SPs1569 putative DNA polymerase III delta prime subunitSubName: Full=Putative DNA polymerase III delta prime subunit; chromosome CDS1568328 876 - 0.393836
SPs1593 putative integrase/recombinaseRecName: Full=Tyrosine recombinase XerD-like; chromosome CDS1590265 747 - 0.32664
SPs1609 putative SNF helicaseSubName: Full=Putative SNF helicase; chromosome CDS1603471 3099 - 0.366247
SPs1611 putative primosome component (helicase loader)SubName: Full=Putative primosome component (Helicase loader); chromosome CDS1608149 903 - 0.41196
SPs1612 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1612; chromosome CDS1609052 1176 - 0.369898
SPs1639 putative transposase, IS1548SubName: Full=Putative transposase, IS1548; chromosome CDS1632930 1134 - 0.379189
SPs1649 putative salivaricin A modification enzyme (amino acid dehydration)SubName: Full=Putative salivaricin A modification enzyme (Amino acid dehydration); chromosome CDS1655635 2835 - 0.308289
SPs1661 degenerate integraseSubName: Full=Degenerate integrase; chromosome CDS1668307 183 + 0.431694
SPs1662 degenerate integraseSubName: Full=Degenerate integrase; chromosome CDS1668577 201 + 0.422886
SPs1663 degenerate integraseSubName: Full=Degenerate integrase; chromosome CDS1668920 369 + 0.373984
SPs1689 putative DNA polymerase III alpha subunitRecName: Full=DNA polymerase III polC-type; Short=PolIII; EC=2.7.7.7; chromosome CDS1688859 4398 - 0.432469
SPs1714 conserved hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1714; chromosome CDS1723773 1269 + 0.435776
SPs1726 M protein trans-acting positive regulator (Mga)SubName: Full=M protein trans-acting positive regulator (Mga); chromosome CDS1741917 1611 - 0.38175
SPs1795 conserved hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS1821482 420 - 0.378571
SPs1798 putative recombination proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS1822969 1137 - 0.407212
SPs1800 putative 3-methyl-adenine DNA glycosylase I, constitutiveSubName: Full=Putative 3-methyl-adenine DNA glycosylase I, constitutive; chromosome CDS1825534 561 - 0.392157
SPs1801 putative Holliday junction DNA helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS1826104 597 - 0.39866
SPs1803 putative DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutL; chromosome CDS1827933 1983 - 0.395361
SPs1804 putative DNA mismatch repair proteinRecName: Full=DNA mismatch repair protein MutS; chromosome CDS1830044 2556 - 0.402191
SPs1823 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1823; chromosome CDS1848193 642 - 0.390966
SPs1831 putative DNA polymerase III delta prime subunitSubName: Full=Putative DNA polymerase III delta prime subunit; chromosome CDS1855859 1368 - 0.390351
SPs1835 hypothetical proteinSubName: Full=Putative uncharacterized protein SPs1835; chromosome CDS1861793 318 - 0.358491
SPs1851 RecF proteinRecName: Full=DNA replication and repair protein RecF; chromosome CDS1878605 1107 + 0.373984
SPs1858 putative transposaseSubName: Full=Putative transposase; chromosome CDS1890121 987 - 0.404255