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2024-05-04 04:04:39

Gene list

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COG category: Replication, recombination and repair
Organism: Oceanobacillus iheyensis HTE831, HTE831

Number of genes found: 171

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Show UniProt / TrEMBL protein name View in Fasta format (DNA) View in Fasta format (Protein)  

 
Oceanobacillus iheyensis HTE831, HTE831
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
OB0029 DNA polymerase III gamma and tau subunitschromosome CDS33477 1710 + 0.376023
OB0031 recombination protein (DNA repair and genetic recombination)chromosome CDS35698 597 + 0.39196
OB0039 DNA polymerase III delta subunitchromosome CDS40378 990 + 0.362626
OB0043 hypothetical conserved proteinchromosome CDS43584 261 + 0.356322
OB0047 hypothetical conserved proteinchromosome CDS47567 771 + 0.376135
OB0049 hypothetical conserved proteinchromosome CDS49897 594 + 0.367003
OB0063 transcription-repair coupling factor (TRCF)chromosome CDS60559 3522 + 0.371096
OB0076 serine:threonine protein kinasechromosome CDS76478 933 + 0.382637
OB0080 recombinase for Bh.Intchromosome CDS82211 1260 + 0.42381
OB0153 integrasechromosome CDS160716 1179 - 0.424936
OB0172 resolvase in Tn917 (partial)chromosome CDS182934 195 + 0.328205
OB0173 site-specific DNA-methyltransferase (cytosine-specific)chromosome CDS183363 1791 + 0.296482
OB0174 hypothetical proteinchromosome CDS185322 1419 + 0.308668
OB0177 hypothetical conserved proteinchromosome CDS190313 2037 + 0.293078
OB0197 spore germination proteinchromosome CDS211304 645 - 0.393798
OB0218 hypothetical conserved proteinchromosome CDS238452 270 + 0.307407
OB0233 transposase for IS657 (partial)chromosome CDS255889 210 + 0.338095
OB0239 DNA mismatch repair proteinchromosome CDS268552 1905 + 0.330184
OB0281 excinuclease ABC subunit Achromosome CDS313174 2430 + 0.360082
OB0286 hypothetical conserved proteinchromosome CDS320564 492 + 0.380081
OB0297 DNA-3-methyladenine glycosidasechromosome CDS330852 597 + 0.407035
OB0301 hypothetical conserved proteinchromosome CDS333592 462 + 0.318182
OB0316 MutT:nudix family proteinchromosome CDS345343 357 + 0.380952
OB0338 hypothetical conserved proteinchromosome CDS359764 420 + 0.369048
OB0351 MutT/nudix family proteinchromosome CDS372271 405 + 0.37037
OB0437 mutator MutT proteinchromosome CDS464586 405 + 0.375309
OB0499 hypothetical conserved proteinchromosome CDS530960 3720 + 0.384946
OB0511 exodeoxyribonucleasechromosome CDS545279 810 - 0.358025
OB0533 3-methyladenine-DNA glycosylase Ichromosome CDS565839 579 + 0.34715
OB0609 ATP-dependent RNA helicasechromosome CDS636000 1488 + 0.392473
OB0610 transposase for IS652chromosome CDS637715 1209 + 0.365591
OB0659 hypothetical proteinchromosome CDS693943 654 - 0.376147
OB0700 hypothetical proteinchromosome CDS740557 444 + 0.306306
OB0736 methylated-DNA-protein-cysteineS-methyltransferasechromosome CDS783958 504 + 0.359127
OB0759 ATP-dependent DNA helicasechromosome CDS808280 2226 + 0.371968
OB0760 DNA ligase (polydeoxyribonucleotide synthase[NAD+])chromosome CDS810517 2004 + 0.380739
OB0789 hypothetical conserved proteinchromosome CDS845003 597 + 0.331658
OB0798 transposase for IS652 (divided with OB0797 and OB0798)chromosome CDS852204 762 + 0.350394
OB0896 A/G-specific adenine glycosylasechromosome CDS947503 1065 + 0.323005
OB0910 transposase for IS652 (divided with OB0908, OB0909, and OB0910)chromosome CDS964883 171 + 0.321637
OB1024 inner spore coat protein Dchromosome CDS1065505 420 + 0.402381
OB1042 DNA-(apurinic or apyrimidinic site) lyasechromosome CDS1082893 669 + 0.363229
OB1057 hypothetical conserved proteinchromosome CDS1100128 588 + 0.37415
OB1065 hypothetical conserved proteinchromosome CDS1107895 504 + 0.327381
OB1144 hypothetical conserved proteinchromosome CDS1194939 1209 + 0.318445
OB1225 hypothetical proteinchromosome CDS1275039 462 + 0.305195
OB1234 hypothetical conserved proteinchromosome CDS1283964 1137 - 0.35796
OB1235 hypothetical proteinchromosome CDS1285383 171 + 0.374269
OB1285 hypothetical conserved proteinchromosome CDS1327688 609 - 0.333333
OB1319 hypothetical conserved proteinchromosome CDS1368442 1530 + 0.333333
OB1352 hypothetical conserved proteinchromosome CDS1397200 231 + 0.329004
OB1361 DNA-damage repair protein (impB/mucB/samB family)chromosome CDS1408824 1251 - 0.382094
OB1387 hypothetical conserved proteinchromosome CDS1432599 402 + 0.266169
OB1416 transposase for IS652chromosome CDS1460209 1194 + 0.39531
OB1433 recombinase for Bh.Int (divided with OB1431, OB1432, and OB1433)chromosome CDS1473902 597 + 0.425461
OB1434 hypothetical conserved proteinchromosome CDS1474518 306 + 0.428105
OB1443 hypothetical conserved proteinchromosome CDS1483083 1209 - 0.363937
OB1450 hypothetical conserved proteinchromosome CDS1488625 567 + 0.368607
OB1548 integrase:recombinasechromosome CDS1591748 918 + 0.376906
OB1583 hypothetical conserved proteinchromosome CDS1620248 1365 + 0.34359
OB1636 transposase in Marinococcus halophiluschromosome CDS1677119 855 - 0.373099
OB1637 transposase in Marinococcus halophiluschromosome CDS1677997 285 - 0.326316
OB1646 transposase for IS652chromosome CDS1687129 1209 + 0.361456
OB1670 resolvase (transposase repressor)chromosome CDS1711630 639 + 0.367762
OB1701 5'-3' exonucleasechromosome CDS1745870 873 + 0.341352
OB1719 transposase for IS658 (divided with OB1719 and OB1720)chromosome CDS1764964 762 - 0.391076
OB1720 transposase for IS658 (divided with OB1719 and OB1720)chromosome CDS1765667 201 - 0.363184
OB1749 hypothetical conserved proteinchromosome CDS1788004 1128 - 0.35461
OB1792 non-specific DNA-binding proteinchromosome CDS1827906 273 - 0.384615
OB1804 recombinase for Bh.Intchromosome CDS1839133 1257 - 0.42323
OB1812 hypothetical proteinchromosome CDS1848859 297 - 0.319865
OB1837 transposase for IS660 (divided with OB1837 and OB1838)chromosome CDS1870435 798 - 0.414787
OB1838 transposase for IS660 (divided with OB1837 and OB1838)chromosome CDS1871207 582 - 0.360825
OB1847 integrase : recombinasechromosome CDS1879380 894 - 0.333333
OB1858 DNA damage inducible proteinchromosome CDS1888149 1260 - 0.353968
OB1878 exodeoxyribonuclease VII small subunitchromosome CDS1912498 237 - 0.345992
OB1879 exodeoxyribonuclease VII large subunitchromosome CDS1912709 1368 - 0.351608
OB1905 helicase (Snf2/Rad54 family)chromosome CDS1936464 1671 + 0.328546
OB1939 ATP-dependent RNA helicasechromosome CDS1965604 1299 - 0.327175
OB1977 hypothetical conserved proteinchromosome CDS2005435 1014 - 0.325444
OB1981 late competence protein (DNA binding and uptake)chromosome CDS2009909 597 - 0.341709
OB2007 hypothetical conserved proteinchromosome CDS2030443 414 - 0.381643
OB2012 conjugation transfer proteinchromosome CDS2035532 2331 - 0.347061
OB2017 hypothetical conserved proteinchromosome CDS2041605 1278 + 0.376369
OB2026 single-strand DNA-specific exonucleasechromosome CDS2052597 2316 - 0.350173
OB2054 hypothetical conserved proteinchromosome CDS2079695 111 - 0.324324
OB2056 DNA repair protein (RadC family)chromosome CDS2081757 576 - 0.361111
OB2093 transcriptional regulator (AraC/XylS family)chromosome CDS2125306 2310 + 0.298268
OB2116 excinuclease ABC subunit C (deoxyribodipyrimidine photolyase)chromosome CDS2149247 1791 - 0.340592
OB2124 DNA mismatch repair proteinchromosome CDS2157583 2349 - 0.369945
OB2128 ribonuclease HIII (RNase HIII)chromosome CDS2162847 927 + 0.361381
OB2129 uracil-DNA glycosylasechromosome CDS2163785 690 + 0.363768
OB2192 hypothetical conserved proteinchromosome CDS2227039 999 - 0.349349
OB2244 recombinase for Bh.Int (divided with OB2244 and OB2245)chromosome CDS2282945 1110 - 0.424324
OB2249 hypothetical proteinchromosome CDS2289171 663 - 0.330317
OB2250 exonucleasechromosome CDS2289909 3090 - 0.336246
OB2251 exonucleasechromosome CDS2293014 1167 - 0.359897
OB2284 spore photoproduct lyasechromosome CDS2326324 1074 - 0.346369
OB2289 helicase (swi/snf family)chromosome CDS2331223 3156 - 0.33967
OB2311 hypothetical proteinchromosome CDS2361373 1023 - 0.316716
OB2319 hypothetical conserved proteinchromosome CDS2370427 489 - 0.349693
OB2342 transposase for IS652chromosome CDS2397707 1209 - 0.365591
OB2386 hypothetical conserved proteinchromosome CDS2437724 450 - 0.342222
OB2387 transposase for IS652chromosome CDS2438314 1194 + 0.39531
OB2454 hypothetical conserved proteinchromosome CDS2511733 393 + 0.35369
OB2487 excinuclease ABC subunit Achromosome CDS2541469 2877 - 0.364964
OB2488 excinuclease ABC subunit Bchromosome CDS2544353 1983 - 0.367625
OB2550 hypothetical proteinchromosome CDS2604951 240 - 0.304167
OB2571 transposase for IS657chromosome CDS2630027 471 - 0.333333
OB2640 transposase for IS652chromosome CDS2707156 1209 - 0.36311
OB2715 recombinase for Bh.Intchromosome CDS2785597 1260 - 0.424603
OB2858 extracellular ribonucleasechromosome CDS2941408 1179 + 0.401187
OB2905 hypothetical proteinchromosome CDS2994238 393 + 0.371501
OB3034 hypothetical conserved proteinchromosome CDS3143990 1788 + 0.35179
OB3039 hypothetical proteinchromosome CDS3150730 189 + 0.365079
OB3041 ATP-dependent DNA helicasechromosome CDS3153025 2148 + 0.355214
OB3075 helicase (swi/snf family)chromosome CDS3193681 3171 - 0.348155
OB3112 hypothetical conserved proteinchromosome CDS3240598 630 + 0.38254
OB3114 ATP-dependent helicasechromosome CDS3243213 1905 - 0.361155
OB3221 hypothetical proteinchromosome CDS3354694 804 - 0.39801
OB3329 hypothetical proteinchromosome CDS3466718 1194 - 0.299832
OB3333 cytosine-specific DNA-methyltransferasechromosome CDS3469736 1113 - 0.336029
OB3336 cytosine-specific methyltransferasechromosome CDS3473289 1383 - 0.355025
OB3339 hypothetical proteinchromosome CDS3476260 2016 - 0.302083
OB3341 very-short-patch-repair endonucleasechromosome CDS3481295 423 + 0.293144
OB3369 hypothetical proteinchromosome CDS3502785 2196 - 0.391621
OB3434 hypothetical proteinchromosome CDS3573002 294 - 0.289116
OB3465 mutator MutT proteinchromosome CDS3603158 480 - 0.366667
OB3478 single-strand DNA-binding protein (phage-related protein)chromosome CDS3613458 486 - 0.393004
addA ATP-dependent deoxyribonuclease subunit Achromosome CDS1233902 3732 + 0.372454
addB ATP-dependent deoxyribonuclease subunit Bchromosome CDS1230409 3501 + 0.363896
comF late competence protein required for DNA uptakechromosome CDS2573164 1425 - 0.361403
dinG ATP-dependent DNA helicasechromosome CDS1801021 2820 - 0.339362
dnaA chromosomal replication initiation proteinchromosome CDS300 1344 + 0.334077
dnaB chromosome replication initiation : membrane attachment proteinchromosome CDS2189652 1335 - 0.317603
dnaC replicative DNA helicasechromosome CDS3597383 1365 - 0.406593
dnaD initiation of chromosome replicationchromosome CDS1797039 678 - 0.337758
dnaE DNA polymerase III (alpha subunit)chromosome CDS2212554 3321 - 0.341162
dnaG DNA primasechromosome CDS1971091 1815 - 0.336088
dnaI primosome component (helicase loader)chromosome CDS2188700 927 - 0.3452
dnaN DNA-directed DNA polymerase III beta chainchromosome CDS1830 1137 + 0.331574
fliJ flagellar protein required for formation of basal bodychromosome CDS1601787 447 + 0.317673
gerCA heptaprenyl diphosphate synthase component I (spore germination protein C1)chromosome CDS1826750 717 - 0.312413
grlA DNA topoisomerase IV subunit Achromosome CDS1734217 2451 + 0.372093
grlB DNA topoisomerase IV subunit Bchromosome CDS1732198 1956 + 0.375767
gyrA DNA gyrase subunit Achromosome CDS7123 2514 + 0.385044
gyrB DNA gyrase subunit Bchromosome CDS5109 1926 + 0.380062
kapB kinase-associated protein Bchromosome CDS2397268 423 + 0.328605
mutL DNA mismatch repair proteinchromosome CDS1673425 1893 + 0.385103
mutM formamidopyrimidine-DNA glycosidasechromosome CDS2193996 843 - 0.355872
mutS DNA mismatch repair protein (mismatch recognition step)chromosome CDS1670808 2604 + 0.352919
nfo endonuclease IVchromosome CDS1964687 894 - 0.350112
nth endonuclease III (DNA repair)chromosome CDS1796385 651 - 0.357911
nudF ADP-ribose pyrophosphatasechromosome CDS1881893 546 - 0.335165
polA DNA polymerase Ichromosome CDS2194854 2643 - 0.345819
polC DNA-directed DNA polymerase III alpha chainchromosome CDS1629315 4287 + 0.369722
priA primosomal replication factor Ychromosome CDS1547354 2409 + 0.369448
recA multifunctional protein involved in homologous recombination (recombinase)chromosome CDS1663302 1044 + 0.386015
recF DNA repair and genetic recombinationchromosome CDS3443 1110 + 0.34955
recG ATP-dependent DNA helicasechromosome CDS1563631 2031 + 0.36583
recN DNA repair and genetic recombination (recombination protein N)chromosome CDS1908613 1695 - 0.339233
recO DNA repair protein (recombination protein O)chromosome CDS1978147 777 - 0.324324
recQ ATP-dependent DNA helicase (recombination protein S)chromosome CDS1849719 1554 - 0.352638
rnh ribonuclease Hchromosome CDS1582431 786 + 0.351145
ruvA holliday junction DNA helicasechromosome CDS2065715 606 - 0.339934
ruvB holliday junction DNA helicasechromosome CDS2064694 1005 - 0.391045
smf DNA processing protein (Smf family)chromosome CDS1587761 885 + 0.350282
topA DNA topoisomerase Ichromosome CDS1588748 2079 + 0.357383
topB DNA topoisomerase IIIchromosome CDS2647991 2163 - 0.346741
tupA teichuronopeptide biosynthesis (related to alkaliphily)chromosome CDS3016440 1410 - 0.323404
vc1065 hypothetical conserved proteinchromosome CDS3279977 339 - 0.356932