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Gene list

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COG category: Replication, recombination and repair
Organism: Synechocystis sp. PCC 6803, PCC6803

Number of genes found: 200

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Synechocystis sp. PCC 6803, PCC6803
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
deaD ATP-dependent RNA helicase; DeaDchromosome CDS2887644 1479 + 0.530088
dnaA chromosomal replication initiator protein; DnaAchromosome CDS1350236 1344 - 0.515625
dnaB replicative DNA helicasechromosome CDS2839957 2619 + 0.407026
dnaE DNA polymerase III alpha subunitchromosome CDS736435 1377 - 0.461147
dnaE DNA polymerase III alpha subunitchromosome CDS3561946 2694 + 0.435412
dnaG DNA primasechromosome CDS1816855 1908 - 0.431866
dnaN DNA polymerase III beta subunitchromosome CDS324831 1176 + 0.516156
dnaX DNA polymerase III subunitchromosome CDS1065660 3351 - 0.488511
dnaX and dnaZ DNA polymerase III subunitchromosome CDS2097643 960 + 0.517708
gyrA DNA gyrase A subunitchromosome CDS2687952 2583 + 0.533101
gyrB DNA gyrase B subunitchromosome CDS1264328 3237 - 0.455051
lig DNA ligasechromosome CDS10622 2010 - 0.491542
mbpA adenine-specific DNA metylasechromosome CDS1274352 930 + 0.351613
mfd transcription-repair coupling factorchromosome CDS2701931 3600 - 0.471944
mutL DNA mismatch repair protein; MutLchromosome CDS880147 1692 + 0.513002
mutM formamidopyrimidine-DNA glycosylasechromosome CDS1982308 864 + 0.525463
mutS DNA mismatch repair protein; MutSchromosome CDS1217156 2469 - 0.513163
mutS DNA mismatch repair proteinchromosome CDS1372455 2739 - 0.482293
mutT mutator MutT proteinchromosome CDS95818 411 - 0.515815
nth endonuclease IIIchromosome CDS1310575 660 + 0.512121
phr deoxyribopyrimidine photolyasechromosome CDS1339656 1467 + 0.512611
phr DNA photolyasechromosome CDS1313278 1362 - 0.422173
pknA eukaryotic protein kinasechromosome CDS3082151 1518 - 0.395916
pknA eukariotic protein kinasechromosome CDS1991550 1725 + 0.506087
pknA protein kinasechromosome CDS1078657 1845 + 0.509485
pknA protein kinase; PknAchromosome CDS1027844 1488 + 0.492608
polA DNA polymerase Ichromosome CDS3104142 2961 + 0.443094
priA primosomal protein N'chromosome CDS2107664 2496 - 0.511619
psbU photosystem II 12 kD extrinsic proteinchromosome CDS297493 396 - 0.441919
radC RadC proteinchromosome CDS2405409 732 - 0.527322
recA RecA gene productchromosome CDS3549956 1065 - 0.529577
recF RecF proteinchromosome CDS1099214 1155 - 0.500433
recG DNA recombinasechromosome CDS2497726 2496 + 0.448317
recJ single-strand-DNA-specific exonuclease; RecJchromosome CDS1082437 2280 - 0.517105
recN DNA repair protein; RecNchromosome CDS2078366 1755 - 0.472934
recQ ATP-dependent DNA helicase; RecQchromosome CDS974053 1437 + 0.523312
recR recombination proteinchromosome CDS3283467 699 + 0.516452
rhnB ribonuclease HIIchromosome CDS95236 573 + 0.525305
rnhA ribonuclease Hchromosome CDS2884357 483 + 0.509317
ruvA Holliday junction DNA helicase; RuvAchromosome CDS1132264 636 - 0.506289
ruvB Holliday junction DNA helicase; RuvBchromosome CDS2651866 1086 - 0.518416
ski2 antiviral proteinchromosome CDS3493885 3021 + 0.508772
sll0010 chromosome CDS2489484 381 - 0.456693
sll0012 transposasechromosome CDS2482743 786 - 0.458015
sll0021 chromosome CDS2465076 1251 - 0.498801
sll0092 transposasechromosome CDS2998239 687 - 0.320233
sll0161 transposasechromosome CDS2328393 303 - 0.478548
sll0177 chromosome CDS2304558 1329 - 0.525959
sll0189 chromosome CDS2720250 453 - 0.516556
sll0200 transposasechromosome CDS2525061 360 - 0.363889
sll0201 transposasechromosome CDS2524573 495 - 0.367677
sll0315 transposasechromosome CDS2444743 684 - 0.355263
sll0317 transposasechromosome CDS2443461 399 - 0.308271
sll0371 chromosome CDS2711740 1566 - 0.314176
sll0431 transposasechromosome CDS3512315 849 - 0.367491
sll0441 chromosome CDS3497389 1383 - 0.342733
sll0544 chromosome CDS2813654 1002 - 0.492016
sll0650 transposasechromosome CDS422253 360 - 0.361111
sll0651 transposasechromosome CDS421765 495 - 0.363636
sll0664 chromosome CDS3110910 921 - 0.320304
sll0665 transposasechromosome CDS3110216 345 - 0.44058
sll0666 transposasechromosome CDS3109733 420 - 0.45
sll0667 transposasechromosome CDS3109036 660 - 0.35
sll0677 transposasechromosome CDS3093908 786 - 0.458015
sll0699 transposasechromosome CDS123989 360 - 0.363889
sll0700 transposasechromosome CDS123501 495 - 0.367677
sll0729 modification methylasechromosome CDS3424667 858 - 0.385781
sll0808 transposasechromosome CDS1711093 567 - 0.366843
sll0896 Holliday juction resolvase; RuvCchromosome CDS3238365 504 - 0.5
sll0980 chromosome CDS669759 1191 - 0.52309
sll0986 transposasechromosome CDS664394 387 - 0.465116
sll1054 chromosome CDS81696 564 - 0.51773
sll1094 transposasechromosome CDS1923170 303 - 0.392739
sll1121 chromosome CDS867257 2313 - 0.540424
sll1156 transposasechromosome CDS1386059 426 - 0.450704
sll1157 transposasechromosome CDS1385754 417 - 0.450839
sll1217 chromosome CDS1683583 678 - 0.474926
sll1255 transposasechromosome CDS1729012 1017 - 0.321534
sll1256 transposasechromosome CDS1725919 360 - 0.363889
sll1257 transposasechromosome CDS1725431 495 - 0.367677
sll1273 chromosome CDS1109620 1425 - 0.393684
sll1366 helicase of the snf2/rad54 familychromosome CDS3305654 3120 - 0.523397
sll1386 chromosome CDS1824953 516 - 0.494186
sll1397 transposasechromosome CDS52260 849 - 0.367491
sll1436 transposasechromosome CDS1901873 360 - 0.363889
sll1437 transposasechromosome CDS1901385 495 - 0.367677
sll1474 transposasechromosome CDS3400402 1017 - 0.3235
sll1503 chromosome CDS475873 1527 - 0.321546
sll1547 chromosome CDS3462883 459 - 0.459695
sll1560 transposasechromosome CDS1970952 1017 - 0.320551
sll1574 chromosome CDS731363 312 - 0.525641
sll1575 serine/threonine protein kinasechromosome CDS730108 1251 - 0.497202
sll1582 chromosome CDS716309 3357 - 0.357462
sll1710 transposasechromosome CDS1275372 786 - 0.459288
sll1712 DNA binding protein HUchromosome CDS970882 408 - 0.473039
sll1716 transposasechromosome CDS967567 786 - 0.459288
sll1757 chromosome CDS1241313 879 - 0.489192
sll1780 transposasechromosome CDS1200376 1017 - 0.3235
sll1786 chromosome CDS860952 786 - 0.524173
sll1791 transposasechromosome CDS852895 387 - 0.490956
sll1792 transposasechromosome CDS852470 429 - 0.445221
sll1860 transposasechromosome CDS2226619 786 - 0.458015
sll1861 transposasechromosome CDS2225766 765 - 0.433987
sll1930 transposasechromosome CDS605541 495 - 0.371717
sll1982 transposasechromosome CDS1555061 714 - 0.365546
sll1983 transposasechromosome CDS1554417 360 - 0.363889
sll1984 transposasechromosome CDS1553929 495 - 0.367677
sll1997 transposasechromosome CDS1624628 468 - 0.34188
sll1998 transposasechromosome CDS1623723 849 - 0.366313
sll1999 transposasechromosome CDS1623130 519 - 0.294798
slr0064 chromosome CDS2591953 1155 + 0.502164
slr0099 transposasechromosome CDS2968169 1020 + 0.346078
slr0152 serine/threonine protein kinasechromosome CDS2182063 1896 + 0.492616
slr0166 transposasechromosome CDS2210626 303 + 0.475248
slr0180 transposasechromosome CDS2327013 1017 + 0.322517
slr0181 chromosome CDS2329337 783 + 0.498084
slr0214 cytosine-specific methyltransferasechromosome CDS2506131 1275 + 0.433725
slr0230 transposasechromosome CDS2534106 849 + 0.366313
slr0231 chromosome CDS2534997 459 + 0.424837
slr0265 transposasechromosome CDS1513225 786 + 0.461832
slr0285 chromosome CDS2124296 678 + 0.348083
slr0350 transposasechromosome CDS2441098 786 + 0.459288
slr0352 transposasechromosome CDS2443999 849 + 0.366313
slr0383 chromosome CDS2385351 561 + 0.511586
slr0460 transposasechromosome CDS3511818 474 + 0.350211
slr0511 transposasechromosome CDS2921660 780 + 0.458974
slr0599 eukaryotic protein kinasechromosome CDS3557481 1608 + 0.544154
slr0634 chromosome CDS2655459 579 + 0.474957
slr0667 chromosome CDS3352682 522 + 0.331418
slr0703 transposasechromosome CDS3096388 786 + 0.456743
slr0704 transposasechromosome CDS3097436 849 + 0.366313
slr0727 chromosome CDS111585 975 + 0.315897
slr0731 chromosome CDS115269 1209 + 0.529363
slr0799 transposasechromosome CDS3066429 324 + 0.496914
slr0800 transposasechromosome CDS3066749 429 + 0.44289
slr0818 chromosome CDS1705868 1356 + 0.503687
slr0856 transposasechromosome CDS1346197 360 + 0.358333
slr0857 transposasechromosome CDS1346550 495 + 0.367677
slr0868 chromosome CDS1366464 306 + 0.437909
slr1034 chromosome CDS663342 390 + 0.461538
slr1048 chromosome CDS498076 3021 + 0.421384
slr1075 transposasechromosome CDS379065 849 + 0.365135
slr1197 chromosome CDS877325 1197 + 0.501253
slr1246 transposasechromosome CDS1385212 537 + 0.454376
slr1282 transposasechromosome CDS1877208 360 + 0.372222
slr1283 transposasechromosome CDS1877582 474 + 0.364979
slr1301 chromosome CDS303939 1608 + 0.485697
slr1357 transposasechromosome CDS1098323 849 + 0.366313
slr1437 chromosome CDS1060901 339 + 0.460177
slr1495 chromosome CDS50246 1650 + 0.508485
slr1522 transposasechromosome CDS1614572 1077 + 0.350975
slr1523 transposasechromosome CDS1615869 660 + 0.360606
slr1524 transposasechromosome CDS1616904 516 + 0.362403
slr1535 chromosome CDS972485 1470 + 0.502721
slr1567 chromosome CDS3375291 2298 + 0.455614
slr1585 transposasechromosome CDS3405462 387 + 0.374677
slr1586 transposasechromosome CDS3405991 321 + 0.34891
slr1623 chromosome CDS2035067 366 + 0.442623
slr1635 transposasechromosome CDS2048497 1017 + 0.3235
slr1683 transposasechromosome CDS1972154 396 + 0.353535
slr1715 transposasechromosome CDS1463455 360 + 0.363889
slr1716 transposasechromosome CDS1463808 495 + 0.367677
slr1902 transposasechromosome CDS851717 426 + 0.438967
slr1903 transposasechromosome CDS852031 417 + 0.46283
slr1936 transposasechromosome CDS2235561 360 + 0.363889
slr1937 transposasechromosome CDS2235914 495 + 0.367677
slr1959 chromosome CDS1759941 2484 + 0.39694
slr2036 transposasechromosome CDS573494 1017 + 0.320551
slr2062 transposasechromosome CDS1420940 1203 + 0.456359
slr2078 chromosome CDS920331 585 + 0.45641
slr2095 transposasechromosome CDS1561693 426 + 0.438967
slr2096 transposasechromosome CDS1562007 417 + 0.450839
slr2112 transposasechromosome CDS1626165 360 + 0.361111
slr2113 transposasechromosome CDS1626518 495 + 0.367677
smr0002 transposasechromosome CDS3097275 105 + 0.314286
ssb single-stranded DNA-binding proteinchromosome CDS3228010 366 + 0.472678
ssl0296 transposasechromosome CDS2328616 255 - 0.462745
ssl0426 transposasechromosome CDS141123 294 - 0.384354
ssl0769 transposasechromosome CDS2558423 195 - 0.394872
ssl1277 transposasechromosome CDS3094773 198 - 0.363636
ssl1507 transposasechromosome CDS1710814 201 - 0.383085
ssl1920 transposasechromosome CDS521076 282 - 0.439716
ssl1922 transposasechromosome CDS520918 252 - 0.448413
ssl2789 resolvasechromosome CDS1580586 216 - 0.453704
ssl3382 chromosome CDS1223255 177 - 0.485876
ssr0256 transposasechromosome CDS2210451 255 + 0.466667
ssr1175 transposasechromosome CDS3096048 285 + 0.385965
ssr1176 transposasechromosome CDS3098425 294 + 0.370748
ssr2078 transposasechromosome CDS1384824 261 + 0.471264
ssr2227 transposasechromosome CDS1679517 288 + 0.413194
ssr2699 transposasechromosome CDS473414 249 + 0.46988
ssr2898 transposasechromosome CDS1483397 207 + 0.47343
topA DNA topoisomerase Ichromosome CDS1414126 2697 + 0.527994
umuC UmuC proteinchromosome CDS3048285 351 + 0.438746
uvrA excinuclease ABC subunit Achromosome CDS962888 2913 + 0.467559
uvrB excinuclease ABC subunit Bchromosome CDS2610706 2010 - 0.449254
uvrC excinuclease ABC subunit Cchromosome CDS1157029 1881 - 0.43647
uvrD DNA helicase IIchromosome CDS1022278 2382 - 0.466835
xerC integrase-recombinase proteinchromosome CDS120719 942 + 0.494692
xthA exodeoxyribonuclease IIIchromosome CDS2233037 828 - 0.490338