Gene list
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COG category: Replication, recombination and repair
Organism: Synechocystis sp. PCC 6803, PCC6803
Number of genes found: 200
Show UniProt / TrEMBL protein name | View in Fasta format (DNA) | View in Fasta format (Protein) | ||||
Synechocystis sp. PCC 6803, PCC6803 | ||||||||
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Name | Locus tag | Product / Description | Genomic element | Type | Begin | Length | Strand | GC-content |
deaD | ATP-dependent RNA helicase; DeaD | chromosome | CDS | 2887644 | 1479 | + | 0.530088 | |
dnaA | chromosomal replication initiator protein; DnaA | chromosome | CDS | 1350236 | 1344 | - | 0.515625 | |
dnaB | replicative DNA helicase | chromosome | CDS | 2839957 | 2619 | + | 0.407026 | |
dnaE | DNA polymerase III alpha subunit | chromosome | CDS | 736435 | 1377 | - | 0.461147 | |
dnaE | DNA polymerase III alpha subunit | chromosome | CDS | 3561946 | 2694 | + | 0.435412 | |
dnaG | DNA primase | chromosome | CDS | 1816855 | 1908 | - | 0.431866 | |
dnaN | DNA polymerase III beta subunit | chromosome | CDS | 324831 | 1176 | + | 0.516156 | |
dnaX | DNA polymerase III subunit | chromosome | CDS | 1065660 | 3351 | - | 0.488511 | |
dnaX and dnaZ | DNA polymerase III subunit | chromosome | CDS | 2097643 | 960 | + | 0.517708 | |
gyrA | DNA gyrase A subunit | chromosome | CDS | 2687952 | 2583 | + | 0.533101 | |
gyrB | DNA gyrase B subunit | chromosome | CDS | 1264328 | 3237 | - | 0.455051 | |
lig | DNA ligase | chromosome | CDS | 10622 | 2010 | - | 0.491542 | |
mbpA | adenine-specific DNA metylase | chromosome | CDS | 1274352 | 930 | + | 0.351613 | |
mfd | transcription-repair coupling factor | chromosome | CDS | 2701931 | 3600 | - | 0.471944 | |
mutL | DNA mismatch repair protein; MutL | chromosome | CDS | 880147 | 1692 | + | 0.513002 | |
mutM | formamidopyrimidine-DNA glycosylase | chromosome | CDS | 1982308 | 864 | + | 0.525463 | |
mutS | DNA mismatch repair protein; MutS | chromosome | CDS | 1217156 | 2469 | - | 0.513163 | |
mutS | DNA mismatch repair protein | chromosome | CDS | 1372455 | 2739 | - | 0.482293 | |
mutT | mutator MutT protein | chromosome | CDS | 95818 | 411 | - | 0.515815 | |
nth | endonuclease III | chromosome | CDS | 1310575 | 660 | + | 0.512121 | |
phr | deoxyribopyrimidine photolyase | chromosome | CDS | 1339656 | 1467 | + | 0.512611 | |
phr | DNA photolyase | chromosome | CDS | 1313278 | 1362 | - | 0.422173 | |
pknA | eukaryotic protein kinase | chromosome | CDS | 3082151 | 1518 | - | 0.395916 | |
pknA | eukariotic protein kinase | chromosome | CDS | 1991550 | 1725 | + | 0.506087 | |
pknA | protein kinase | chromosome | CDS | 1078657 | 1845 | + | 0.509485 | |
pknA | protein kinase; PknA | chromosome | CDS | 1027844 | 1488 | + | 0.492608 | |
polA | DNA polymerase I | chromosome | CDS | 3104142 | 2961 | + | 0.443094 | |
priA | primosomal protein N' | chromosome | CDS | 2107664 | 2496 | - | 0.511619 | |
psbU | photosystem II 12 kD extrinsic protein | chromosome | CDS | 297493 | 396 | - | 0.441919 | |
radC | RadC protein | chromosome | CDS | 2405409 | 732 | - | 0.527322 | |
recA | RecA gene product | chromosome | CDS | 3549956 | 1065 | - | 0.529577 | |
recF | RecF protein | chromosome | CDS | 1099214 | 1155 | - | 0.500433 | |
recG | DNA recombinase | chromosome | CDS | 2497726 | 2496 | + | 0.448317 | |
recJ | single-strand-DNA-specific exonuclease; RecJ | chromosome | CDS | 1082437 | 2280 | - | 0.517105 | |
recN | DNA repair protein; RecN | chromosome | CDS | 2078366 | 1755 | - | 0.472934 | |
recQ | ATP-dependent DNA helicase; RecQ | chromosome | CDS | 974053 | 1437 | + | 0.523312 | |
recR | recombination protein | chromosome | CDS | 3283467 | 699 | + | 0.516452 | |
rhnB | ribonuclease HII | chromosome | CDS | 95236 | 573 | + | 0.525305 | |
rnhA | ribonuclease H | chromosome | CDS | 2884357 | 483 | + | 0.509317 | |
ruvA | Holliday junction DNA helicase; RuvA | chromosome | CDS | 1132264 | 636 | - | 0.506289 | |
ruvB | Holliday junction DNA helicase; RuvB | chromosome | CDS | 2651866 | 1086 | - | 0.518416 | |
ski2 | antiviral protein | chromosome | CDS | 3493885 | 3021 | + | 0.508772 | |
sll0010 | chromosome | CDS | 2489484 | 381 | - | 0.456693 | ||
sll0012 | transposase | chromosome | CDS | 2482743 | 786 | - | 0.458015 | |
sll0021 | chromosome | CDS | 2465076 | 1251 | - | 0.498801 | ||
sll0092 | transposase | chromosome | CDS | 2998239 | 687 | - | 0.320233 | |
sll0161 | transposase | chromosome | CDS | 2328393 | 303 | - | 0.478548 | |
sll0177 | chromosome | CDS | 2304558 | 1329 | - | 0.525959 | ||
sll0189 | chromosome | CDS | 2720250 | 453 | - | 0.516556 | ||
sll0200 | transposase | chromosome | CDS | 2525061 | 360 | - | 0.363889 | |
sll0201 | transposase | chromosome | CDS | 2524573 | 495 | - | 0.367677 | |
sll0315 | transposase | chromosome | CDS | 2444743 | 684 | - | 0.355263 | |
sll0317 | transposase | chromosome | CDS | 2443461 | 399 | - | 0.308271 | |
sll0371 | chromosome | CDS | 2711740 | 1566 | - | 0.314176 | ||
sll0431 | transposase | chromosome | CDS | 3512315 | 849 | - | 0.367491 | |
sll0441 | chromosome | CDS | 3497389 | 1383 | - | 0.342733 | ||
sll0544 | chromosome | CDS | 2813654 | 1002 | - | 0.492016 | ||
sll0650 | transposase | chromosome | CDS | 422253 | 360 | - | 0.361111 | |
sll0651 | transposase | chromosome | CDS | 421765 | 495 | - | 0.363636 | |
sll0664 | chromosome | CDS | 3110910 | 921 | - | 0.320304 | ||
sll0665 | transposase | chromosome | CDS | 3110216 | 345 | - | 0.44058 | |
sll0666 | transposase | chromosome | CDS | 3109733 | 420 | - | 0.45 | |
sll0667 | transposase | chromosome | CDS | 3109036 | 660 | - | 0.35 | |
sll0677 | transposase | chromosome | CDS | 3093908 | 786 | - | 0.458015 | |
sll0699 | transposase | chromosome | CDS | 123989 | 360 | - | 0.363889 | |
sll0700 | transposase | chromosome | CDS | 123501 | 495 | - | 0.367677 | |
sll0729 | modification methylase | chromosome | CDS | 3424667 | 858 | - | 0.385781 | |
sll0808 | transposase | chromosome | CDS | 1711093 | 567 | - | 0.366843 | |
sll0896 | Holliday juction resolvase; RuvC | chromosome | CDS | 3238365 | 504 | - | 0.5 | |
sll0980 | chromosome | CDS | 669759 | 1191 | - | 0.52309 | ||
sll0986 | transposase | chromosome | CDS | 664394 | 387 | - | 0.465116 | |
sll1054 | chromosome | CDS | 81696 | 564 | - | 0.51773 | ||
sll1094 | transposase | chromosome | CDS | 1923170 | 303 | - | 0.392739 | |
sll1121 | chromosome | CDS | 867257 | 2313 | - | 0.540424 | ||
sll1156 | transposase | chromosome | CDS | 1386059 | 426 | - | 0.450704 | |
sll1157 | transposase | chromosome | CDS | 1385754 | 417 | - | 0.450839 | |
sll1217 | chromosome | CDS | 1683583 | 678 | - | 0.474926 | ||
sll1255 | transposase | chromosome | CDS | 1729012 | 1017 | - | 0.321534 | |
sll1256 | transposase | chromosome | CDS | 1725919 | 360 | - | 0.363889 | |
sll1257 | transposase | chromosome | CDS | 1725431 | 495 | - | 0.367677 | |
sll1273 | chromosome | CDS | 1109620 | 1425 | - | 0.393684 | ||
sll1366 | helicase of the snf2/rad54 family | chromosome | CDS | 3305654 | 3120 | - | 0.523397 | |
sll1386 | chromosome | CDS | 1824953 | 516 | - | 0.494186 | ||
sll1397 | transposase | chromosome | CDS | 52260 | 849 | - | 0.367491 | |
sll1436 | transposase | chromosome | CDS | 1901873 | 360 | - | 0.363889 | |
sll1437 | transposase | chromosome | CDS | 1901385 | 495 | - | 0.367677 | |
sll1474 | transposase | chromosome | CDS | 3400402 | 1017 | - | 0.3235 | |
sll1503 | chromosome | CDS | 475873 | 1527 | - | 0.321546 | ||
sll1547 | chromosome | CDS | 3462883 | 459 | - | 0.459695 | ||
sll1560 | transposase | chromosome | CDS | 1970952 | 1017 | - | 0.320551 | |
sll1574 | chromosome | CDS | 731363 | 312 | - | 0.525641 | ||
sll1575 | serine/threonine protein kinase | chromosome | CDS | 730108 | 1251 | - | 0.497202 | |
sll1582 | chromosome | CDS | 716309 | 3357 | - | 0.357462 | ||
sll1710 | transposase | chromosome | CDS | 1275372 | 786 | - | 0.459288 | |
sll1712 | DNA binding protein HU | chromosome | CDS | 970882 | 408 | - | 0.473039 | |
sll1716 | transposase | chromosome | CDS | 967567 | 786 | - | 0.459288 | |
sll1757 | chromosome | CDS | 1241313 | 879 | - | 0.489192 | ||
sll1780 | transposase | chromosome | CDS | 1200376 | 1017 | - | 0.3235 | |
sll1786 | chromosome | CDS | 860952 | 786 | - | 0.524173 | ||
sll1791 | transposase | chromosome | CDS | 852895 | 387 | - | 0.490956 | |
sll1792 | transposase | chromosome | CDS | 852470 | 429 | - | 0.445221 | |
sll1860 | transposase | chromosome | CDS | 2226619 | 786 | - | 0.458015 | |
sll1861 | transposase | chromosome | CDS | 2225766 | 765 | - | 0.433987 | |
sll1930 | transposase | chromosome | CDS | 605541 | 495 | - | 0.371717 | |
sll1982 | transposase | chromosome | CDS | 1555061 | 714 | - | 0.365546 | |
sll1983 | transposase | chromosome | CDS | 1554417 | 360 | - | 0.363889 | |
sll1984 | transposase | chromosome | CDS | 1553929 | 495 | - | 0.367677 | |
sll1997 | transposase | chromosome | CDS | 1624628 | 468 | - | 0.34188 | |
sll1998 | transposase | chromosome | CDS | 1623723 | 849 | - | 0.366313 | |
sll1999 | transposase | chromosome | CDS | 1623130 | 519 | - | 0.294798 | |
slr0064 | chromosome | CDS | 2591953 | 1155 | + | 0.502164 | ||
slr0099 | transposase | chromosome | CDS | 2968169 | 1020 | + | 0.346078 | |
slr0152 | serine/threonine protein kinase | chromosome | CDS | 2182063 | 1896 | + | 0.492616 | |
slr0166 | transposase | chromosome | CDS | 2210626 | 303 | + | 0.475248 | |
slr0180 | transposase | chromosome | CDS | 2327013 | 1017 | + | 0.322517 | |
slr0181 | chromosome | CDS | 2329337 | 783 | + | 0.498084 | ||
slr0214 | cytosine-specific methyltransferase | chromosome | CDS | 2506131 | 1275 | + | 0.433725 | |
slr0230 | transposase | chromosome | CDS | 2534106 | 849 | + | 0.366313 | |
slr0231 | chromosome | CDS | 2534997 | 459 | + | 0.424837 | ||
slr0265 | transposase | chromosome | CDS | 1513225 | 786 | + | 0.461832 | |
slr0285 | chromosome | CDS | 2124296 | 678 | + | 0.348083 | ||
slr0350 | transposase | chromosome | CDS | 2441098 | 786 | + | 0.459288 | |
slr0352 | transposase | chromosome | CDS | 2443999 | 849 | + | 0.366313 | |
slr0383 | chromosome | CDS | 2385351 | 561 | + | 0.511586 | ||
slr0460 | transposase | chromosome | CDS | 3511818 | 474 | + | 0.350211 | |
slr0511 | transposase | chromosome | CDS | 2921660 | 780 | + | 0.458974 | |
slr0599 | eukaryotic protein kinase | chromosome | CDS | 3557481 | 1608 | + | 0.544154 | |
slr0634 | chromosome | CDS | 2655459 | 579 | + | 0.474957 | ||
slr0667 | chromosome | CDS | 3352682 | 522 | + | 0.331418 | ||
slr0703 | transposase | chromosome | CDS | 3096388 | 786 | + | 0.456743 | |
slr0704 | transposase | chromosome | CDS | 3097436 | 849 | + | 0.366313 | |
slr0727 | chromosome | CDS | 111585 | 975 | + | 0.315897 | ||
slr0731 | chromosome | CDS | 115269 | 1209 | + | 0.529363 | ||
slr0799 | transposase | chromosome | CDS | 3066429 | 324 | + | 0.496914 | |
slr0800 | transposase | chromosome | CDS | 3066749 | 429 | + | 0.44289 | |
slr0818 | chromosome | CDS | 1705868 | 1356 | + | 0.503687 | ||
slr0856 | transposase | chromosome | CDS | 1346197 | 360 | + | 0.358333 | |
slr0857 | transposase | chromosome | CDS | 1346550 | 495 | + | 0.367677 | |
slr0868 | chromosome | CDS | 1366464 | 306 | + | 0.437909 | ||
slr1034 | chromosome | CDS | 663342 | 390 | + | 0.461538 | ||
slr1048 | chromosome | CDS | 498076 | 3021 | + | 0.421384 | ||
slr1075 | transposase | chromosome | CDS | 379065 | 849 | + | 0.365135 | |
slr1197 | chromosome | CDS | 877325 | 1197 | + | 0.501253 | ||
slr1246 | transposase | chromosome | CDS | 1385212 | 537 | + | 0.454376 | |
slr1282 | transposase | chromosome | CDS | 1877208 | 360 | + | 0.372222 | |
slr1283 | transposase | chromosome | CDS | 1877582 | 474 | + | 0.364979 | |
slr1301 | chromosome | CDS | 303939 | 1608 | + | 0.485697 | ||
slr1357 | transposase | chromosome | CDS | 1098323 | 849 | + | 0.366313 | |
slr1437 | chromosome | CDS | 1060901 | 339 | + | 0.460177 | ||
slr1495 | chromosome | CDS | 50246 | 1650 | + | 0.508485 | ||
slr1522 | transposase | chromosome | CDS | 1614572 | 1077 | + | 0.350975 | |
slr1523 | transposase | chromosome | CDS | 1615869 | 660 | + | 0.360606 | |
slr1524 | transposase | chromosome | CDS | 1616904 | 516 | + | 0.362403 | |
slr1535 | chromosome | CDS | 972485 | 1470 | + | 0.502721 | ||
slr1567 | chromosome | CDS | 3375291 | 2298 | + | 0.455614 | ||
slr1585 | transposase | chromosome | CDS | 3405462 | 387 | + | 0.374677 | |
slr1586 | transposase | chromosome | CDS | 3405991 | 321 | + | 0.34891 | |
slr1623 | chromosome | CDS | 2035067 | 366 | + | 0.442623 | ||
slr1635 | transposase | chromosome | CDS | 2048497 | 1017 | + | 0.3235 | |
slr1683 | transposase | chromosome | CDS | 1972154 | 396 | + | 0.353535 | |
slr1715 | transposase | chromosome | CDS | 1463455 | 360 | + | 0.363889 | |
slr1716 | transposase | chromosome | CDS | 1463808 | 495 | + | 0.367677 | |
slr1902 | transposase | chromosome | CDS | 851717 | 426 | + | 0.438967 | |
slr1903 | transposase | chromosome | CDS | 852031 | 417 | + | 0.46283 | |
slr1936 | transposase | chromosome | CDS | 2235561 | 360 | + | 0.363889 | |
slr1937 | transposase | chromosome | CDS | 2235914 | 495 | + | 0.367677 | |
slr1959 | chromosome | CDS | 1759941 | 2484 | + | 0.39694 | ||
slr2036 | transposase | chromosome | CDS | 573494 | 1017 | + | 0.320551 | |
slr2062 | transposase | chromosome | CDS | 1420940 | 1203 | + | 0.456359 | |
slr2078 | chromosome | CDS | 920331 | 585 | + | 0.45641 | ||
slr2095 | transposase | chromosome | CDS | 1561693 | 426 | + | 0.438967 | |
slr2096 | transposase | chromosome | CDS | 1562007 | 417 | + | 0.450839 | |
slr2112 | transposase | chromosome | CDS | 1626165 | 360 | + | 0.361111 | |
slr2113 | transposase | chromosome | CDS | 1626518 | 495 | + | 0.367677 | |
smr0002 | transposase | chromosome | CDS | 3097275 | 105 | + | 0.314286 | |
ssb | single-stranded DNA-binding protein | chromosome | CDS | 3228010 | 366 | + | 0.472678 | |
ssl0296 | transposase | chromosome | CDS | 2328616 | 255 | - | 0.462745 | |
ssl0426 | transposase | chromosome | CDS | 141123 | 294 | - | 0.384354 | |
ssl0769 | transposase | chromosome | CDS | 2558423 | 195 | - | 0.394872 | |
ssl1277 | transposase | chromosome | CDS | 3094773 | 198 | - | 0.363636 | |
ssl1507 | transposase | chromosome | CDS | 1710814 | 201 | - | 0.383085 | |
ssl1920 | transposase | chromosome | CDS | 521076 | 282 | - | 0.439716 | |
ssl1922 | transposase | chromosome | CDS | 520918 | 252 | - | 0.448413 | |
ssl2789 | resolvase | chromosome | CDS | 1580586 | 216 | - | 0.453704 | |
ssl3382 | chromosome | CDS | 1223255 | 177 | - | 0.485876 | ||
ssr0256 | transposase | chromosome | CDS | 2210451 | 255 | + | 0.466667 | |
ssr1175 | transposase | chromosome | CDS | 3096048 | 285 | + | 0.385965 | |
ssr1176 | transposase | chromosome | CDS | 3098425 | 294 | + | 0.370748 | |
ssr2078 | transposase | chromosome | CDS | 1384824 | 261 | + | 0.471264 | |
ssr2227 | transposase | chromosome | CDS | 1679517 | 288 | + | 0.413194 | |
ssr2699 | transposase | chromosome | CDS | 473414 | 249 | + | 0.46988 | |
ssr2898 | transposase | chromosome | CDS | 1483397 | 207 | + | 0.47343 | |
topA | DNA topoisomerase I | chromosome | CDS | 1414126 | 2697 | + | 0.527994 | |
umuC | UmuC protein | chromosome | CDS | 3048285 | 351 | + | 0.438746 | |
uvrA | excinuclease ABC subunit A | chromosome | CDS | 962888 | 2913 | + | 0.467559 | |
uvrB | excinuclease ABC subunit B | chromosome | CDS | 2610706 | 2010 | - | 0.449254 | |
uvrC | excinuclease ABC subunit C | chromosome | CDS | 1157029 | 1881 | - | 0.43647 | |
uvrD | DNA helicase II | chromosome | CDS | 1022278 | 2382 | - | 0.466835 | |
xerC | integrase-recombinase protein | chromosome | CDS | 120719 | 942 | + | 0.494692 | |
xthA | exodeoxyribonuclease III | chromosome | CDS | 2233037 | 828 | - | 0.490338 |