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# Staphylococcus aureus subsp. aureus Mu50, Mu50

>SAV2048 similar to DNA mismatch repair protein MutS
MSTNQTFLIFVIAIILLTSVIGIVGRYMSRQRLLKSMETLWQTISPLEAF
IRPNSHFDYEYKLYKEKFESHSLVDDKTWSDLNMNAIFHKMNYNLTAIGE
MKLYACLRGMLSITNKSLLSLFNDNAEFRKNVTYHLALIGKTVYPTFPDQ
ITPVKRQNILFLCPFLPVISFAVIFINSQVGILLFLMSCLFNIILSATLK
RTYEDDLKSIFYASNVLKQGYTISKIKHAPQPEVNFKQFRTARHLTSVLA
EVNDEDIGAMVIKLVKLIFMLDYVLFHSIQKSYTTHMNELKNCFDYIAEL
DNHYALAMYRRTLECYTEPQIDDTNDGIVFSELTHPLIADAVANDFSLSQ
NILLTGSNASGKSTFMKSIAINIILASAIQTVTASKFVYQPGIVFTSMAN
ADDVLSGDSYFMAELKSIKRIVEIPDNQKIYCFIDEIFKGTNTTERIAAS
ESVLSFLHEKSNFRVIAATHDIELAELLKQRYENYHFNEVIENNNIHFDY
KIKPGKANTRNAIELLKITSFPAKIYERAKDNVSNG
>SAV0620 hypothetical protein
MNKVEAIKFNDDIVKMYEALKIKSERDYLFFKLAIHSGLKVSELLTITVS
QVKRLIEKCTLSEMCKAHFHSLIKIRLPETLSKELLQYIEDRSLSNEDVL
FQSLRTNQVLSRQQAYRIIHQASIEAGIDNVGLTTLRKTFAYHAYQKGIP
IPVIQKYLGHQSAIETLNFIGLENECEHSIYISLQL
>SAV2150 hypothetical protein
MSPKDTTRFETKPDHQAQFDWKESINFKTKDNQRIPLYIGVLLLYYSRFI
IMHNNE
>SAV1453 primosomal protein DnaD
MDKYQLKARPVVIRRELLDHYSDLGLDEQDLVILLKLIYASETSNKQPSI
ELLQKGSTMQPRDITMVIQNLIQRELLELQVQKDEEGRFTEYMNLDPFFE
KLSHILKQQSMETKEQNSKEKFKQLFRVLEDTFARPLSPYEIETLNQWID
VDKHDSAIIQAALDEANSLNKLSFKYMDRILLNWKKNNVKTIDDSRKIRE
KFNKPKMTHTVKTVPKFDWLNGENLDGK
>SAV2483 hypothetical protein
MFTTYKNINELENAYDEERKQLNDAFNQIDELRHQTRKKCEQMYDHFLYL
KHKMNYSEDAMIRMTRIIESFDRETNQRIRHHEMKLEDYKDELRREYLKQ
SDRIEGDE
>SAV2586 hypothetical protein
MSNKLDGINKMITAKHKQMDDLYDEKREVKALIDESDELNHSIEQLYQHL
GDRYHSSNMASRMEQFRDEFHFAKRRSTEALYEQQQQIQHGIRKAEEEMI
DLEMRRNVEIETVTKEENKWKQ
>SAV1787 truncated transposase
MQFTNSDKFSIFLSYDLFQTPTDTRTLIPFLTMIQNTFGYLPEYIVADAG
YDSEQNYMAIIDDFNKTPLITYGMFIKDKTRKFKSDIFNTQNWKYDELND
EFICPNNKRIGFKRYAYRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNS
KSNKKIMKNYNWEYFKAQINQKLSEPETKKIYSQRKIDVELVFGFMKAIL
GFTRMSVRGINNVKRELGFVLMALNIRKIAAQRAVHYKIHIKKADFYQII
NRNQLFYIA
>SAV2259 conserved hypothetical protein
MSLENQLAELKYDYVRLQGDLEKRESLNLDTSALVRQLKDIENEIRNVRA
QMQD
>SAV0889 hypothetical protein
MSNTDKYLRDIARELKGIRKELQKRNETVIIDANLDSVRSAVLADKEKSK
YNEPLF
>SAV1786 truncated transposase
MKKFKKKFDDYSERKNKYEEQKSILKDRNSFSKTDHDATFMRMKEDHMKN
GQLKPGYNLQIATNSQFFYPMTYFKPQQILEL
>SAV1616 putative Holliday junction resolvase
MSDIMGWTAQGLDTLRINEENNELGIDQLVDIIKKHNVGTVVIGLPKNMN
NSIGFRGEASLTYKEKLLEAYPSIEIVMWDERLSTMAAERSLLEADVSRQ
KRKQVIDKMAAVFILQGYLDSLH
>SAV0812 similar to secreted von Willebrand factor-binding protein
MKNKLLVLSLGALCVSQIWESNHASAVVSGEKNPYVSKALELKDKSNKSN
SYENYRDSLESLISSLSFADYEKYEEPEYEKAVKKYQQKFMAEDDALKNF
LNEEKKIKNADISRKSNNLLGLTHERYSYIFDTLKKNKQEFLKDIEEIQL
KNSDLKDFNNTEQHNADVEINNLENKVLMVGYTFYNTNKDEVEELYSELD
LIVGEVQDKSDKKRAVNQRMLNRKKEDLEFIIDKFFKKIQQERPESIPAL
TSEKNHNQTMALKLKADTEAAKNDVSKRSKRSLNTQNNKSTTQEISEEQK
AEYQRKSEALKERFINRQKSKNESVVSLIDDEDDNENDRQLVVSAPSKKP
TTPTTYTETTTQVPMPTVERQTQQQIVYKTPKPLAGLNGESHDFTTTHQS
PTTSNHTHNNVVEFEETSALPGRKSGSLVGISQIDSSHLTEREKRVIKRE
HVREAQKLVDNYKDTHSYKDRLNAQQKVNTLSEGHQKRFNKQINKVYNGK
>SAV0835 conserved hypothetical protein
MAIVNKVIIVEGKSDKKRVQQVIAEPVNIICTHGTMSIDKLDDMIESLYD
KQVFVLADSDDEGDRIRNWFKRYLSESEHIFIDKTYCQVANCPKQYLAHV
LSKHGFTCKKETPLLPNINNERLVLVNE
>SAV1558 ATP-dependent RNA helicase
MAKHPFEQFNLESSLIDAVKDLNFEKPTEIQNRIIPRILKRTNLIGQSQT
GTGKSHAFLLPLMQLIDSEIKEPQAIVVAPTRELAQQLYDAANHLSQFKA
GVSVKVFIGGTDIEKDRQRCNAQPQLIIGTPTRINDLAKTGHLHVHLASY
LVIDEADLMIDLGLIEDVDYIAARLEDNANIAVFSATIPQQLQPFLNKYL
SHPEYVAVDSKKQNKKNIEFFLIPTKGAAKVEKTLNLIDILNPYLCIIFC
NSRDNANDLARSLNEAGIKVGMIHGGLTPRERKQQMKRIRNLEFQYVIAS
DLASRGIDIEGVSHVINFDVPNDIDFFTHRVGRTGRGNYKGVAITLYSPD
EEHNISLIEDRGFVFNTVDIKDGELKEVKAHNQRQARMRKDDHLTNQVKD
KVRSKIKNKVKPGYKKKFKQEVEKMKRQERKQFSKQQNRQKRKQNKKG
>SAV0864 single strand DNA binding protein
MLNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFIN
VVVFKKQAENVKNYLSKGSLAGVDGRLQTRNYENKDGQRVFVTEVVADSV
QFLEPKNNNQQQNNNYQQQRQTQTGNNPFDNNADSIEDLPF
>SAV1895 DNA polymerase IV
MTERRIIHIDMDYFFAQVEMRDNPKLKGKPVIVGGKASSRGVVSTASYEA
RKYGVHSAMPMSQAHKLCPNGYFVTSNFGAYRETSAQIMSIFRSYTDKVE
PMSLDEAYLDITELVRPDLPASKIAQYIRKDILEQTHLTASAGVSYNKFL
AKLASGMNKPDGLTVIDYQNVHDILMTLDIGDFPGVGKASKKVMHDNGIF
NGRDLYEKTEFELIRLFGKRGRGLYNKARGIDHSEVKSSRVRKSVGTERT
FATDVNDDEEILRKVWELSGKTAERLNKLQKSAKTVTVKIKTYQFETLSK
QMSLRDSVSSEEDIYNIAYLLYNDLKDPDVPIRLIGVTVGNLEQSTYKNM
TIYDFI
>SAV1482 probable ATP-dependent DNA helicase RecQ
MLHDILRNKFGFENFKPGQQEIIESIMSQQHTLGILPTGSGKSLCYQIPT
YLSGKPTLIISPLISLMDDQVMQLKINGEKRVTCIHSGMDEIEKKHNIKC
LLHSRFIFLSPEFLLQPSNFKLISMIDFGMIVLDEAHCLSEWGYDFRPHY
ALIGKVTKHFKEAVVLALTATAPPHLQDDLTEMLAIQFNVIKTTMNRPNI
SFKHLNFHDDEDKIEWLLPFLQQSGPTIIYVSSKKMCLNLAQLIYDSGFL
TGIYHGDMNYQERHTVQQQFLNNDIPIIVATSAFGMGINKKDIRTIIHFH
LSTSPSNYIQEIGRAGRDGELSQAISLFQPDDKYILETLLFADMITEEDV
QNFEIGEFLAPDKQDVLTTLHSFYSIGALKQIFKQSFKRKQLGFFRMIGY
CKLDQCRRKYLLEFFGEYPPAQDRCCDNDSNITDIVILNKKKVIRSIGFD
EKLQNLFLR
>SAV1689 similar to formamidopyrimidine-DNA glycosidase
MPELPEVEHVKRGIEPYVINQKIEHVIFSDKVIEGKAQGKETIIKGIELD
TFKTLSEGYTITNVERRSKYIVFQLDNKREQRTLISHLGMAGGFFIVDEL
EDIMIPNYRKHWHVIFELSNDKKLIYSDIRRFGEIRNVASVASYPSFLEI
APEPFTNEALTYYLNRIHQQSNKNKPIKQVILDHKVIAGCGNIYACEALF
RAGVLPDKKVKDLTHQQQEMVFYYVREVLEEGIKHGGTSISDYRHADGKT
GEMQLHLNVYKQPVCKVCGSQIETKIIATRNSHYCPVCQK
>SAV1345 similar to exonuclease SbcD
MKIIHTADWHLGKILNGKQLLEDQAYILDMFVEKMKEEEPDIIVIAGDLY
DTTYPSKDAIMLLEQAIGKLNLELRIPIIMISGNHDGKERLNYGASWFEH
NQLFIRTDFTSINSPIEINGVNFYTLPYATVSEMKHYFEDDTIETHQQGI
TRCIETIAPEIDEDAVNILISHLTVQGGKTSDSERPLTIGTVESVQKGVF
DIFDYVMLGHLHHPFSIEDDKIKYSGSLLQYSFSEAGQAKGYRRLTINDG
IINDVFIPLKPLRQLEIISGEYNDVINEKVHVKNKDNYLHFKLKNMSHIT
DPMMSLKQIYPNTLALTNETFNYNEENNAIEISEKDDMSIIEMFYKHITD
KELSDIQSKKIKNILENELRKED
>SAV0869 hypothetical protein
MESFQNLAKKPTLKKQIIEQAFDLKCENCGRKYDYYKFDDGSEFKHGCDC
EMIEYAKQSTENYHKRNRRRKAERIFKQSIMNEDLTKATFDNYNPTNEQL
VYAKNLCERYANNFTLDNKQSLLIQGSFGTGKSHLSMSIVKSVKAKGYTV
LYMNVPQLISTIKNTYNNQTAMTEQELAQIISDVDLMVFDDYGINMNEFA
TSKMFELIESRIGKHNIFTTNLDEKEMTKNKDLQRIFSRIMSNTTLIKMD
GQDYRTRGLKL
>SAV0783 integrase
MSYNLNLSHNIYKDAKLGTYYFRITYYDKSNTRKYITRKGFKQRKDAVKK
CNEMMDELEGVGHLNRLPFDKLVEEYIDWYSARRKTSSVKALKTHTNNHL
LPYFKSMDVFKMTTQDVMKFQNKKLKEGHSGDYLKKMHVYLVSLLNHAMK
FHELKQNVASLVGNFEIESQKRLNYWTLEQFNQFYEALATQQQKLFFKLL
FYSGARKGEIRALTWRDINFDDDFIHINKTDYHGEVTAPKTKSAIRDIYL
PTHMMYDIKDYLIWYKENNIYKDDYVLFGTFYKAYSESTIDRWFTNALKV
LDEQLPNGQNFPRIVIHELRHSHASMLVNLGASVMIIAQRLGHSDTTEVY
NRYGHLYPSTQKEIVKYL
>SAV1983 single-strand DNA-binding protein
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFIN
IIVFKKQAENVNKYLSKGSLAGVDGRLQTRNYENKEGQRVYVTEVIADSI
QFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELN
DDDLPF
>SAV1499 similar to ADP-ribose pyrophosphatase
MDLNEKTIDRTVIYNGKIVDVEIHTVTLPNGETSTRELVYHNGAVAVCAL
TPKKEVVLVKQYRKPVEKPLLEIPAGKLEDDENRVEAAKRELEEETGYIA
KELTHVVDMYGSPGFCDEQLSIYFTDNLEEGTVHLDEDEFVEVIKVPIEN
VKSMLMNKEIEDAKTIIALQHLLLNYNHSK
>SAV0369 truncated integrase
MNIGYIFTNAAGGPIDSNKISNIIKGGTIKETTEISSIKKPVTTHTLHHS
HISTLAQLGINLKAMQEHVGHSDYKKSRDIHTCY
>SAV1894 DNA polymerase III, alpha chain PolC-type
MIQDAFVALDFETANGKRTSICSVGMVKVIDSQITETFHTLVNPQDYFSQ
QNIKVHGIQPEDVENAPTFDYVFPYMMQFIADLPVVAHNAAFDMNVLHQS
IQNIGLPTPNLTYFCSYQLAKRTVDSYRYGLKHMMEFYQLDFHGHHDALN
DAKACAMITFRLLKNYENLTYVTNIYGKNLKDKG
>SAV1590 similar to ComEA
MYQFLLRYKDFLTQWKLYIISAVVLIMVLIGFIFWRQDDYTSRNFENKDT
ALKQSTSENNSLSKLEDVQVKDGDNSKNKGPVYVDVKGAVKHPNVYKMTS
KDRVVDLLDKAQLLDDADVSRINLSEKLTDQKMIFIPHKGQKNVEPQIEV
NSVHVKNGNTNNTKVNLNTASVSELMSVPGVGQAKANAIVEYRNQQGAFQ
EIDDLKKVKGFGSKTFDKLKSYFTI
>SAV1636 similar to single-strand DNA-specific exonuclease
MIKPKYKWKLTKPAEYISDELTSKLKLTPIVKKILESKSIIDEQAIESII
SDTDVNHDALQLSDMTKAIERIKRAIANDEKILVYGDYDADGVTSTTILV
TTLQLLGAQVGWHIPNRFTEGYGPNELAFRNAHDEGITLIITVDNGIQGH
NEIKMVQDLGVDVIVTDHHEIGSTLPEAYAIVHPMHPSFNYPFQQLCGAG
VAYKLAQALIENVPDYFKALVAIGTIADLVSLTDENRSLVKQGLKVLNDQ
CPTSVKALLKEAGYNDNIDEETIGFIIGPRLNAVGRLDDASLACELLMTD
DEEEAAFLAEQVEHFNRERKDIVATITEEAMAMAETKVKKGDLFLLLAKE
NWHEGVLGIVASKIVETFALPTLILNIDREQNHAKGSARSIDQVSMFEIL
SAHQELIAKFGGHHMAAGMTMDIENIESLAEGLNKWMKELSKTTSLDPVK
PVDVLLTENDITIKNIRDMNRLRPFGTDFSRPIFEMDDLSVSSVKAIGQQ
KNHLKLTLGESNIAALFWQNGHLEPELQDEQPINILGSVQINEWNGNQSP
QLIIQDIAMNEQQILDYRSKRKSLPFTENDENIVVLIHPKSDKVNANEYY
YGEEIKQQTDKVVLRDLPTSMEDLSNSLQQLQFSQLYIVLQHNHSIYFDG
IPNMDIFKKCYKALITKQETNIQKEGMLLCQHLSVKPDTLKFMLKVFLDL
KFVTQEDGLIRINQQPDKRSIDSSKVYQLRQQRMDVEKQLLYQDFSEIKN
WIKSQLS
>SAV0740 hypothetical protein
MKKIVIIAVLAILFVVISACGNKEKEAQHQFTKQFKDVEQKQKELQHVMD
NIHLKEIDHLSKTDTTDKNSKEFKALQEDVKNHLIPKFEAYYKSAKNLPD
DTMKVKKLKKEYMTLANEKKDAIYQLKKFIGLCNQSIKYNEDILDYTKQF
EKNRYKVESEIKLADNKSEATNLTTKLEHNNKALRDTAKKNLDDSKENEV
KGAIKNHIMPMIEKQITDINQTNISDKHVNNARKNAIEMYYSLQNYYNTR
IETIKVSEKLSKVDVDKLPKKGIDITHGDKAFEKKLEKLEEK
>SAV1448 conserved hypothetical protein
MNDVVESLIYEVNNMQQNFENVKSQQQDHDFYQTVKPYTEHIDSMLNEIK
LHREFIIEVPYMNSRKFELLIANIEQLSVECHFKRTSRKLFIEKLKSVQY
DLQNILDGVTKEGTYG
>SAV1985 hypothetical protein
MTENNKLQTIEQQLVQEKNVSDNVLNKVRVLESQGNLELPNDYSPSNAMK
QAWLQISQDNKLMSCNDTSKANALLDMVTQGLNPAKNQCYFIPYGNKMQL
QRSYHGNVMMLKRDAGAQDVVAQVIYKGDTFKQEMGETGRIKAIKHEQDF
FNIDKENIIGAYCTIVFNDGRDNYIEVMTIEQIKQAWMQSSMIKDEKALQ
NSKTHNNFKEEMAKKTVINRAAKRYINTSTDSNLFKYAQESEQRQRKEVL
DAEVEENANQEQLDFEQPVLEEAQYTELENDKPIDVSDFEEIKEPATEKE
SEEEPF
>SAV1975 hypothetical protein
MKINESLKKLKEKGYKENEDKAIFNLADGTLEIYIDHDEKTIITEFHDLK
VFVSEDLKDKSMESVMYELAGIDEEDKEND
>SAV2344 putative 3-methyladenine DNA glycosylate
MDFVNNDTRQIAKNLLGVKVIYQDTTQTYTGYIVETEAYLGLNDRAAHGY
GGKITPKVTSLYKRGGTIYAHVMHTHLLINFVTKSEGIPEGVLIRAIEPE
EGLSAMFRNRGKKGYEVTNGPGKWTKAFNIPRAIDGATLNDCRLSIDTKN
RKYPKDIIASPRIGIPNKGDWTHKSLRYTVKGNPFVSRMRKSDCMFPEDT
WK
>SAV0081 hypothetical protein
MNEEILREVADIFIGDDRDSIYDYKTGNELVRFFNHYFNKGDIYQAPFPS
RWLYVVKHLQTLIQERKINQFFTLILSNHYIKYELKIDEVEAAKQAAKAL
KLFNKRLNHYGYYITGTNNARYFMDKDEDTESIGYGGYANIYLQKSTGLA
VKKLKEEYLTDSSIKSRFKREFDLTKSFDTNPLFINVFEFNESDYSYTME
LADETLKDYIESKTISELEKVKIIMKILKAMSQAHSENKIHRDISSKNVL
MFRGKVKISDLGLGKNLDEIHSHQTFDTNGVGQYKYCAPEQMYSLKQADK
QSDVFSLGRLINFIMTGNVVNNHHLFRGVSDKATNSSKEYRFEDANEMLK
MLQRILEYHSSAKHVEKCQEKLKRGVFDDESEEFIMTRSDEQLCQMVLSS
NNNEQACLIRYMQKNESSACDLIESINRKYQEFCGRFEDYDPFAKLAYMI
LCNNFSYRVNETAARVLNYVAWSVNRFSAQDLIKGLINRGVEPLIEEKLK
DN
>SAV1844 probable phosphoesterase
MVKFIHCSDLHLDSPFKSKSHISPKIFEDVQKSAYESFKNIVDIALQQDV
DFVIIAGDLFDSENRTLRAEIFLKQQFERLQNEQIFVYVCHGNHDPLSSK
ISSNWPDNVSVFSNKVETYEAITKSGETIYIHGFSYENRASYENKIDEYP
SSQGQKGIHIGVLHGTYSKSSVNERYTEFILEDLNSKLYHYWALGHIHER
QQLSDMPVINYSGNIQGRHFNEQGEKGCLLIEGDHLKLKTKFYPTQYIRF
EEATIETDKTSKQGLYEVIQNFKEQVREEGKAFYRLTLVINSETLISPQD
LLQVEEMITDYEENENQFVYIDELKIQYAQNDESPLVNEFSAELLVDQTV
FDKAMSDLYLNPRASKFLDDYGTFDHTALVNRAEEILKAEMRGEQNDN
>SAV0800 similar to bacteriophage terminase small subunit
MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQ
YIQEQKDKIIDENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQ
SGKVQLVYNEHVELIEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPI
FINIGEWDGDDEELDKTVKDVSNANPNHTVIVDDIPLED
>SAV0385 conserved hypothetical protein
MLTKEFAQRVELSEKQVRKIVQHLEERGYQLSKTEYRGREATDFKEEDIE
LFKDIADKVKQTNSYDLAFDELEKEKDFLQVIVKNDDKNLPTNQNVAQLV
EDLRLEIQKMREERHLLGQMMNQVHQQQQELKELQNQLTSKIDSNSESLK
AIQTSQEAIQEAQASQAKVLAESTNKVEKNAVTEDKADSKDSKVAGVNTS
TDAKTDTKAENAGDGTATKVDKEDQISATEAIEKASVEQSKNENAAETSN
KEATVDADAQHDAEQQVAEAHAEASKQATSNDSLEAKAENDSTASQSEMS
EPKPQEEKKGFFARLFNL
>SAV0068 transposase
MKRVSYSVETKYKAVEMKAAGFSTKEIMKELNIKNRTQVETWWRWYRNGE
SYRFSQHVGKQYTYGKGLEELSEVEQLKLENKRKDIELDILKKYKALERK
WYQQ
>SAV0885 phage terminase, small subunit
MNEKQKRFADEYIMNGCNGKKAAISAGYSKKTAESLASRLLRNVNVSEYI
KERLEQIQEERLMSITEALALSASIARGEPQEAYSKKYDHLNDEVEKEVT
YTITPTFEERQRSIDHILKVYGAYIDKKEITQKNIEINIGEYDDES
>SAV1557 probable endonuclease IV
MLLGSHVSMSGKKMLEGSAIEAYEYGETTFMIYTGAPQNTRRKSIEDLNI
TKGHEVMEKYGLSNIVVHAPYIINIANTTKPETFNLGVDFLQQEIERTQA
IGAKDIVLHPGAHVGAGVDAGINKIIEGLNEVLTNDNNVRIALETMAGKG
TEIGRSFEELARIIDGVHNNERLSVCFDTCHTHDAGYNVKEDFDGVLNEF
DKIIGVDRIKVVHVNDSKNDRGAQKDRHENIGFGYIGFDALNYIVHHDSF
KDIPKILETPYVGEDKKNKKPPYKLEIEMLKQQQFDPELKNKVMQQ
>SAV1140 putative ribonuclease HIII
MANIVFKLSDKDITTLMSRITFDTENLPQGMKARAKYQNTTVNIYQSGKV
MFQGNHAEAVSKELLPQHSQLNTNKTKKKNMANSSLEQTLMYDQFNCIGS
DEAGSGDYFGPLTVCAAFVTKEHVPILKTLGVDDSKKLTDTKIVELAEQL
VAFIPHSLLTLHNDKYNIQQAKGWTQVKMKAVLHNEAIKNVLEKIDSSQL
DYIVIDQFAKREVYSHYALSDIPLPKKTKFETKGESKSLAIAVASIISRY
AFITYMDQISKYINMTIPKGAGAKVDVIAAKIIKKYGLSRLDTISKKHFK
NREKAQKILKPL
>SAV0608 putative endonuclease III
MLGTDELYKLLYRHMGPQNWWPADNDIELMLGAILVQNTRWRNAEIALNQ
IKEHTHFNPNHILELPIETLQSLIHSSGFYKSKTLTIKTLLTWLARHHFN
YQEINERYKGGLRKELLSLKGIGSETADVLLVYIFGRIEFIPDSYTRKIY
DKLGYENTKNYDQLKKVVTLPNHFTNQDANEFHALLDVFGKHYFRDKDIK
NYDFLEPYFKK
>SAV0789 hypothetical protein
MNWEIKDLMCDIEVIKEKINDVAIKHGWFVEDKFVKNELETKQEHINFSA
SYLEHRIQNEHTVELLQVYLKEFGELIQKFHEIEKASSENFGEESDDAKK
LKITE
>SAV2572 hypothetical protein
MSETDEPQGFERTHNILNINQSSLGVVTYITNKLKSTLKQHIIIARGKKR
IDYRLSYNFYTTYYDNVEIKKIDCEYTYAMPIAILIRHTMSFDNAHFFAQ
LRHPVL
>SAV1346 similar to exonuclease SbcC
MKPLHLKLNNFGPFLKEEIDFSKIDNNELFLISGKTGSGKTMIFDAMTYA
LFGKASTEQREENDLRSHFADGKQPMSVTFEFQLNHRIYKVHRQGPYIKE
GNTTKTNAKFDVFEMVDGKYEIRESKVISGTQFIIELLGVNADQFRQLFI
LPQGEFKRFLISNSREKQGILRTLFDSEKFEAIREILKEELKKEKAQIEN
RYQQIDLLWQEIESFDDDKIKGLLELATQQIDKLIENIPLLQARSKEILA
FVNESKETAIKEYEIIEKKTLENNILKDNINQLNKNKIDFVQLKEQQPEI
DEIEAKLKLLQDITNLLNYIENREKIETKIANSKKDISKTNNKILNLDCD
KRNIDKEKKMLEENGDLIESKTSFIDKTRVLFNDINKYQQSYLNIECLIT
EGEQLGDELNNLIKGLEKVEDSIGNNESDYEKIIELNNAITNINNEINII
KENEKAKAELDKLLGSKQELENQINEETTIMKNLEIKLDHYDKSKLDLND
KESFISEIKSAVKIGDQCPICGNEIQDLGHHIDFDSIAKRQNEIKEIEAN
IHAIKSNIAVHNSEIKFVNEKISNINIKTQSDFSLEVLNKRLLENENALN
NQRDLNKFIEQMKEEKDNLTLQIHNKQLRLNKNESELKLCRDLITEFETL
SKYNNITNFEVDYKKYVQDVNQHQELSKEIEDKLMQLSQRKLIEQNNLNH
YENQLETYNNDLELNEQSIEMEMSRLNLTDDNDINEIIAWRGEQEELEQK
RDTYKKRYHEFEMEIARLESLTKDKELLDSDKLKDEYEQKKEKMNTLIDE
YSAVHYQCQNNINKTQSIVSHINYLNQELKDQQEIFQLAEIVSGKNNKNL
TLENFVLIYYLDQIIAQANLRLATMSDNRYQLIRREAVSHGLSGLEIDVF
DLHSNKSRHISSLSGGETFQSSLALALGLSEIVQQQSGGISLESIFIDEG
FGTLDQETLETALDTLLNLKSTGRMVGIISHVSELKNRIPLVLEVKSDQY
QSSTRFKRN
>SAV1619 similar to deoxyribonuclease
MSDPTLFDYSMIKGTVEAILFQNSDNFYTVLKVDTIETNEDFDTMPTVVG
FLPNIVEGDVYTFKGQVVDHPRYGKQLKAETFEKEMPQTKEAIISYLSSD
LFKGVGKKTAQNIVNTLGDNAINDILDDHSVLEKVSGLSKKKQKQIAEQI
SANQESEKIMIRLHDLGFGPKLSMAIYQFYLGDTLTILDRNPYQLIYDIK
GIGFNKADQLARNIGIAYNDNERLKAALLYTLEEECIKQGHTYLPINVVI
DLTVDVLNYQDEEVIEPEKLDEMLQYLNEEKRLIIDNEQVAIPSLYYSEI
KSVQNLFRIKTHTNKLTEIEQSDLQMHIGEIEDANQVNYAASQKEALQTA
INSKVMLLTGGPGTGKTTVIKGIVELYAEIHGLSLDYDDYVNDDYPVVLA
APTGRASKRLQESTGLEAMTIHRLIGWNQDTKPEDILENEINARLIIIDE
MSMVDTWLFHQFLSAVPLDAQLIFVGDEDQLPSVGPGQVFKDLIESKAIP
RVNLTEVYRQQDGSSIIELAHRMKLGQKIDITQRFHDRSFINCQANQIPT
VVEKVVTSAVNKGYTMADIQVLAPMYKGNAGIKRLNQVLQDILNPKKKDT
REIEFGDVVFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFWAKENALNKDV
LVVDFEGNEITFTKQDMMELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRM
LQRPILYTGLTRAKTSLVLLGDPEAFDIGLKTNGQARLTQLCTLLKNYFN
SEDEEMLENTATNDTGASQTTIDDQVEAPMSSNDSGEVTSDSTKTDINVL
TEATMFKIDPMINMGEITPYDFIER
>SAV2025 hypothetical protein
MFNINIDEDEARELLEQAINARVDELAKEKYFMTYKELSNYLNLSKPTIE
ELLINNGMKYYMVGSTYRFKKSDVDEFMEQLTAHMNIQNNDFKQVNIKKL
LEARQ
>SAV0418 probable transposase
MKKVVNLIMTKERRTFSSEFKLQMVRLYKNGKLKNEIIRKYDLKPSIISN
SIKQHQNTGPFNHQDNLKSDEKELIKLRKEVQHLKMEHDVLKQILKLI
>SAV1566 similar to DNA repair protein RecO
MLMRQKGIIIKAVDYGESDKIITILNEHGAKVPLMARRAKKVKTGLQAQT
QLFVYGLFIYNQWRGMGTLNSVDVISQHYKLQMDLYVSSYASLAAETIER
SMDEGDIAPYNYQLLQFVLEKIESGTSAQLMSVVVMLKCMKRFGFTASFN
RCAVSGNDTQADLIGYSFKFDGAISRQEASKDVHAVILSNKTLYLLDVLQ
KLPIDKMNSLNIHQEIIDEMSDIILMLYREYAGMFFKSQKLINQLKRLEQ
>SAV0063 hypothetical protein
MTQTNPSFNPSPRYKSKKGWYKDKPPKEKGGMPTEVEIAGPIVIENKFID
PKTNTEKVIITDEDQKEIVESSDILTTQKLPSLMKYGFSINEKYTKDLGY
ALQQMRNQLPISYLYEGVGILETPFGPIVSLSEIYTTKEFDNKSPSDAIC
DNAYDLTPKGTFDNWFNMYLKEVKGSLLLELAVVFGISALVTSFLKHKHE
TEFAGIIFSFTGQSSTGKSTAASLAVSVAGNPTKGNETLFRNWNATRNAL
EGYLSNNFGIPIVFDELSSATFRDTTGLLYSITEGQGRQRSNVHGEVKTP
KNWGTSVISTSEHSIFNDSAQNDGLRVRTIEINEQFTTNATNADNIKKAV
ALNYGHVLPLVAKYLINREDEVIQWFYKEVDWFEAKLKDDKSNTGNRMFK
RYAVITTSAKILGRVLATDIDIAKIRDYFIDYHGHTISERSLADKAIDVI
IQFVAQNRGKFSDEGALKNMFENYGLISLKDDHIEVKMIANVFKQMLNNH
QFQDVNNVVNALRDKGFILADRGRQTTKRSVKDNSGKKQSLVFYHLKLDV
EFASILGLTKDKSLIQNWTPANDNKAAKELFKSANEGIGPSGVHEDF
>SAV2216 hypothetical protein
MKKSIYILPLAYIVIESPLQIGNVILTPSLKVIESGHFHTDFSLISMFNK
KEFLSILSTSQLKEDALVIFKDDFFEPTTVDQNYYFINKLSQKADRTLDI
IRINENNFGVPEQLPGIPGITSNGWQVAEQLTDHKLRTINGKVMFMIREG
IGLYPIDLSSNIYEDKLYNCLYVTSNEINLLFREAIHRVSESMYMNNLNT
SFVYLLSTLEMLSSREYLNFKKTKSKILPFISYSKYQYHKCSEYLRNISE
NLRTEIIHNGKSIFDLYDNYEDVYKLLNWIKLIIIEYISNIVKKNIQTFD
DLEKERKKIINSLGI
>SAV1821 hypothetical protein
MTTFDAKKLKKEYLDWYNQILEFSNLSNNSVKIDTPFKDNSLDNLKIYAL
YDQSRDMITLTDDGYTIFGLENNGVSINKFKKRKKIFEEHLSAYGIKYND
KTHEIFVQTNFKNFNKSKHNLLQCLIFVNDMYLLSNPKSQNIFTEDVANK
LDEHNIYYGRDIPIIGSSGVVHNFDFFISAKKNQKEKFINVFSNPNNSMI
IKSKITDAMQAKKIKRHRQNEFIFILNDSKKEINEHNKNLLHENYISTID
YSELDEKIGLLI
>SAV0967 similar to ATP-dependent nuclease subunit A
MTIPEKPQGVIWTDAQWQSIYATGQDVLVAAAAGSGKTAVLVERIIQKIL
RDGIDVDRLLVVTFTNLSAREMKHRVDQRIQEASIADPANAHLKNQRIKI
HQAQISTLHSFCLKLIQQHYDVLNIDPNFRTSSEAENILLLEQTIDEVIE
QHYDILDPAFIELTEQLSSDRSDDQFRMIIKQLYFFSVANPNPTNWLDQL
VTPYEEEAQQAQLIQLLTDLSKVFITAAYDALNKAYDLFSMMDGVDKHLA
VIEDERRLMGRVLEGGFIDIPYLTDHEFGARLPNVTAKIKEANEMMVDAL
EDAKLQYKKYKSLIDKVKNDYFSREADDLKADMQQLAPRVKYLARIVKDV
MSEFNRKKRSKNILDFSDYEHFALQILTNEDGSPSEIAESYRQHFQEILV
DEYQDTNRVQEKILSCIKTGDEHNGNLFMVGDVKQSIYKFRQADPSLFIE
KYQRFTIDGDGTGRRIDLSQNFRSRKEVLSTTNYIFKHMMDEQVGEVKYD
EAAQLYYGAPYDESDHPVNLKVLVEADQEHSDLTGSEQEAHFIVEQVKDI
LEHQKVYDMKTGSYRSATYKDIVILERSFGQARNLQQAFKNEDIPFHVNS
REGYFEQTEVRLVLSFLRAIDNPLQDIYLVGLMRSVIYQFKEDELAQIRI
LSPNDDYFYQSIVNYINDEAADAILVDKLKMFLSDIQSYQQYSKDHPVYQ
LIDKFYNDHYVIQYFSGLIGGRGRRANLYGLFNKAIEFENSSFRGLYQFI
RFIDELIERGKDFGEENVVGPNDNVVRMMTIHSSKGLEFPFVIYSGLSKD
FNKRDLKQPVILNQQFGLGMDYFDVDKEMAFPSLASVAYKAVAEKELVSE
EMRLVYVALTRAKEQLYLIGRVKNDKSLLELEQLSISGEHIAVNERLTSP
NPFHLIYSILSKHQSASIPDDLKFEKDIAQVEDSSRPNVNISIIYFEDVS
TETILDNNEYRSVNQLETMQNGNEDVKAQIKHQLDYQYPYVNDTKKPSKQ
SVSELKRQYETEESGTSYERVRQYRIGFSTYERPKFLSEQGKRKANEIGT
LMHTVMQHLPFKKERISEVELHQYIDGLIDKHIIEADAKKDIRMDEIMTF
INSELYSIIAEAEQVYRELPFVVNQALVDQLPQGDEDVSIIQGMIDLIFV
KDGVHYFVDYKTDAFNRRRGMTDEEIGTQLKNKYKIQMKYYQNTLQTILN
KEVKGYLYFFKFGTLQL
>SAV1868 similar to A/G-specific adenine glycosylase
MYQQSSFKENLIHWFDENQREMPWRQTTNPYYIWLSEVMLQQTQVKTVID
YYHRFVERFPTVEVLSQASEDEVLKYWEGLGYYSRARNFHTAIKEVYDKY
EGLVPKDPDQFKALKGVGPYTQAAVMSIAYNVPLATVDGNVFRVWSRLND
DYRDIKLQSTRKSYEQELLPYVTTEAGTFNQAMMELGALICTPKNPLCLF
CPVQENCEAFDKGTFEKLPVKSKNVSKKVIEQSVFLIRNNQGQYLLQKRS
EKLLHGMWQFPMFESEHARRKMTEKIGHDIQPVETPIFELKHQFTHLTWK
IKVYAASGAINIETLPDDMIWFNLSDRDQYTFPVPMSKIYQFING
>SAV1250 DNA topoisomerase I topA homologue
MADNLVIVESPAKAKTIEKYLGKKYKVIASMGHVRDLPRSQMGVDTEDNY
EPKYITIRGKGPVVKELKKHAKKAKNVFLASDPDREGEAIAWHLSKILEL
EDSKENRVVFNEITKDAVKESFKNPREIEMNLVDAQQARRILDRLVGYNI
SPVLWKKVKKGLSAGRVQSVALRLVIDRENEIRNFKPEEYWTIEGEFRYK
KSKFNAKFLHYKNKPFKLKTKKDVEKITAALDGDQFEITNVTKKEKTRNP
ANPFTTSTLQQEAARKLNFKARKTMMVAQQLYEGIDLKKQGTIGLITYMR
TDSTRISDTAKAEAKQYITDKYGESYTSKRKASGKQGDQDAHEAIRPSST
MRTPDDMKSFLTKDQYRLYKLIWERFVASQMAPAILDTVSLDITQGDIKF
RANGQTIKFKGFMTLYVETKDDSDSEKENKLPKLEQGDKVTATQIEPAQH
YTQPPPRYTEARLVKTLEELKIGRPSTYAPTIDTIQKRNYVKLESKRFVP
TELGEIVHEQVKEYFPEIIDVEFTVNMETLLDKIAEGDITWRKVIDGFFS
SFKQDVERAEEEMEKIEIKDEPAGEDCEVCGSPMVIKMGRYGKFMACSNF
PDCRNTKAIVKSIGVKCPKCNDGDVVERKSKKNRVFYGCSKYPECDFISW
DKPIGRDCPKCNQYLVENKKGKTTQVICSNCDYKEAAQK
>SAV1249 similar to DNA processing Smf protein
MIKLFLLKLYWAHFSTKQIHQFLMAYPNVIKEEGRKKDSYLCEWVNREEN
VLLLRKYYAFIKLDHNDIIKELQKLKVSYITYMDSEYPVLLKEIYQFPLL
LFYKGNIKLINNMHHLAVVGARDSTSYTQQSLEFLLSNDKSKYLTIVSGL
AQGADAMAHQIALKYNLPTIAVLAFGHQTHYPKSTLALRNKIEEKGLVIS
EYPPHTPIAKYRFPERNRIISGLSKGVLITEAKEQSGSHITIDFALEQNR
NVYVLPGSMFNPMTKGNLLRIQEGAKVVLNANDIFEDYYI
>SAV0492 conserved hypothetical protein
MKINEFIVVEGRDDTERVKRAVECDTIETNGSAINEQTLEVIRNAQQSRG
VIVLTDPDFPGDKIRSTITEHVKGVKHAYIDREKAKNKKGKIGVEHADLI
DIKEALMHVSSPFDEAYESIDKSVLIELGLIVGKDARRRREILSRKLRIG
HSNGKQLLKKLNAFGYTEADVRQALEDE
>SAV1982 hypothetical protein
MTGWISIDRSIQNHWLFKEKRTFSKFEAWIYLLMEANHSKAKVPIGNQIV
TVERGQRLTSILTLSDLFNWSRFKVKTFLDLLESDGMLEVKTTSKYTLIT
IVNYDFYQSEQGRNQHQNDIKPTSKQHQSNINPTSKQHQTNTNNNDNKDN
NEKNVNNEKKKTTAFDFFQDNGFGFITSYNLDDLNYYLDSFENDSDEIVT
ASLKIAKDRNKVTWGYAKSILNTWLNANLKSIEQVRAFEKQQLESKKQNY
KPFVKQSKEKTPKWLTDSTRETKTPEVDENLEKDREAFIKRLNSKWE
>SAV0093 hypothetical protein
MSQLLNDTLSAWLLIESLSPGEVNFTAEDILSAEHFKNGAKQAQLQSFDE
YFEIWNSERFIISEEKSETGELIFKFYRHCFRYNEINLKIQDIFDDYSDI
HNPNGTHCYGYTFNTDKHGKVIVDSIHIPMIMSALKEIEKNKNANIEEKF
NDSVEKFFQKVKEILADEPINEFKLKKMDKAYDEYFSVLNSKKDGLFGHY
VAIEYVKDSDLPQPEFNSFFISDIEKARKSPNQTLIDYIEGVEESQRIEV
DENKEMFDKFLHPSRLPDGRWPSQTEFRLSLMQQLAVNQITSGNERISSV
NGPPGTGKTTLLKDIFAHLVVERGKELAKLNNPKDAFVKTKIHETDDKYV
YLLKESIAKYKMVVASSNNGAVENISKDLPKIEEIIRNPEKCKFPKYEQN
YANLAHELKDFAEIAEDLIGESAWGLFSGVFGKSTNINQVLSHMLKQDAN
DIGFAKLLQNENNRMSYNELMSEWQSHQRAFLEELRHVEMLKEESIRAYD
VYKNCESFSKIEQVINSEKTSIEEQVYHLDNETLRDNKEIEDLDNRINYI
VKQIETLNELIKSIKESNKGFINKLKAMFNSEEDESYKDHNKEKQQLLTQ
QLELEKCKKNKHEDLVSKLKEKEKLIKQLTKVQLQLDELNSQLQELEAYR
IESKITIPEKDFWSDNNYDERQVTNLWTSDELQYRRAMLFLRAMILHKLL
LIANNTTIYYAINDFKDRRKLIDANPDKVHNAWNVMHLIFPVVSTTFASF
KSMYGGIPKDFIDYLFIDEAGQAIPQAAVGALYRSKKVVAVGDPIQIEPV
VTLESHLIDNIRKNYHVPEYLVSKEASVQSVADNANQYGFWKSDATDSNQ
KTWIGIPLWVHRRCLKPMFTIANQIAYNNKMVLPSNITKVGKTGWYDVKG
NAVQKQFVKEHGEKVVGLLADDWIEAIKEGKNEPSSFVISPFSAVQQQIK
RMLKQQLPTRIDIERTKINQWVDKSIGTVHTFQGKEAQKVYFVIGTDNTQ
DGAVNWSCEKPNLLNVAVTRAKKEFYVIGDMQRIQMKPFYETIFKERNVK
>SAV0289 hypothetical protein
MNFNDIETMVKSKFKDIKKHAEEIAHEIEVRSGYLRKAEQYKRLEFNLSI
ALDDVESTAKDVQTAKSSANKDSVSVKGKAPNTLYIEKRNLMKQKLEMLG
EDIDKNKESLQKAKGIAGEKASEYFNKAMN
>SAV1980 hypothetical protein
MRDYMEIEIKFNEVFNAPMGSPRPRFSTKGRYAHTYMPTKYTEHKKYLQN
QMPKLNLENALKIELEFYFTPPKSWSKKKKTQAIGQLKVTKPDIDNLMKT
VLDACNNYLWKDDNQITEITSSKRYGIEPKIIIRIEEI
>SAV2213 hypothetical protein
MNVRNSYKVKHKYLKVNRSNMITYKSNQYSASAEYCGKTVEVQVYDQKQH
V
>SAV1805 truncated transposase
MEVIQKNAHQYSVPAMCKVLKIPRSTYYDSIKRKDNKITKDDSNVERAAI
NIFNSNRKVFSTRRIKNHLNDKGLTVSGQKIGRL
>SAV0414 hypothetical protein
MFISTLQIRNFRNYESEIFRFDNETNTIIGENDSGKTNALTALRILLDDS
YYYSSKTLKESDFFHGIQNGWQGHWIIISATFEGISEEEFDNEICASISL
NSESQTILEELISNADKGVGSISLFIRPNKAIRKQLFDISTELDSHQFNE
FRNSIRLSDYEFYYTSKSNLNFCINENYDKLVGRLNDNIASNPEEDDEAL
LGSRIDMSDIFKHISVVYVDALRDVLREMKNNRNPVKRIMETIESKISSD
NVESLKTIIQQLNETITSVPEIRKIGENINRQLNSIIGSVYSPNLLLSST
MSDDMGSLAKFLSMKPEQNIDLDLLGLGHLNMIYLALKIVEFEACRSREL
LNIMLIEEPEAHIHHHIQKTLFEGLNLQKNYTQILMTTHSVHLAEVSEIS
RMNVLKSFNGKSIVMNPANNLNSFAKEKLKKNNLNLINAVERYLDVKRNG
LLFSKGVILVEGDAEEILIPQIVKKLFGINLDELGIGLINVGSTSFEYIA
SLFDDDRIQRKCAIVTDLDEQAIPSEHRLYKSTAQEKGQARKEKLSSLFN
ENNWVNCFYANTTFEIEFLDVNKENILTYVSPIIDDAFKDKKTITAYKEE
IQSEQYLERNLAMLKLANHVGKGWFAIELGEKIDFLIKIPKYILNAIAFA
CQEIVDLSIYKKILLHTIDLYEETTELSALSASLKTSDTADLNIAIISLL
EYFGKDEDVVYLINQIENYTKILYAEVSK
>SAV2096 similar to single strand DNA binding protein
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFC
KAFGKLASNIEKYTNQGTLVGITGQMRSRKYDKDGQTHFVTELYVETIKF
MSPKSQNNEILSDSILDIDSQNIDNHDLLEI
>SAV2021 hypothetical protein
METGKSDVLDKIEKINKKDSALQEIIPKGYEIEHHQCGVALYQLIPSKKE
GEPDKKVFITNTIPQITERFEDIESNEVSFNMLFYDNKTPVNIAVSAEEI
SDSRQLLKLVNKKLDVTSSTSTKLVDYINVSKRYNPPLNVKVATRLGHVK
GYFIYPYQEVMKDSNVKLFSNDKGFQKLIDSFRSKGTLQGYSKKVFAQIK
DLPMVMVMLYASLGSVLLREFGLQPFIVEISGSTSTGKTFTLNLVSSVWG
TSDLITTWSSTQNSIESMASFLNSFPMFKDDTRNTHPKFVTSTTYNFSSG
ESKSRSNINLTLNAKKEWRNILISTGESSIANMADEKAGVSARVVTLQDP
PYPDNFDFTTLDKSFRENYGTLGLAFIKQYESKKDVYKNAFESYQRYFNQ
KGSNEIMQRLGRAFALLQVTGEVLNDIDGFEHDHFKIIEQAYDSMVKNNK
TIDKPKQLLEELLQYLDANRNNIVGDGYDSVNYGDVKAVYKHDFLCIKNE
TVKNKLGHEMQTITGQWDKKGYLIKDKKRIQKQVKHKSQRHLGYAIKKEI
IEELGFDFSISHNPYTESY
>SAV0691 putative deoxyribodipyrimidine photolyase
MAIAVLLNRMFRMEHNPLFEYIYQQKEDIDACYFIIPEEDMSSASDLKAQ
FYRGTLQRFYQSLHAEKLTPYVMSYDDIISFCKENNISEVVIAGDIMSYH
LEEYDILHQRSLFNEARIAVTLIRGNHYFKASKTMNQQGEPYKVFTSFYR
KWRPYLRHRDVYHYDLKSFEDFVIASPDDLVFDDIAFGSSQVIEQNKWQH
FLDQDIQNYESGRDYLPEVLTSQLSVALAYGLLDIIEIFNDLLARYDEDE
ANHEAFIRELIFREFYYVLMTQYPETSYQAFKPKYRQIKWSQNEANFNAW
CEGQTGFPIIDAAIMELTQTGFMHNRMRMVVSQFLTKDLFIDWTWGEKFF
RKHLIDYDAASNIHGWQWSASTGTDAVPYFRMFNPIRQSERFDAKALYIK
TYLPIFNQIDAKYLHDTQRNESNLFEQGIELGSHYPRQMVDHQEKRTQVL
ATFKALD
>SAV1444 similar to methyltransferase
MFQLLAVCPMGLEAVVAREIQELGYETNVENGRIFFEGDASAIVKANLWL
RTADRIKIVVGRFNATTFDELFEQTKALPWESIIDKEGNFPVQGRSVKST
LHSVPDCQAITKKAIVERLRRAYNEKGWLNESGAKYPVEVAILKDNVLLT
IDTSGSGLNRRGYRLAQGEAPIKETLAASLIRLANWKGDTPLIDPFCGSG
TIAIEACLIAQNIAPGFNREFVSEQWNIMPANIYDDYRDEADKMADYDKE
IEVYASDIDPEMVEIAKRNAEEVGLSDIIKFSVKDVNTLTIDTEEPVALI
GNPPYGERIGDREEVEEMYRYIGKLMKQHPFLSTYILTSNKEFEYLVNRK
ATKRRKLFNGYIECTYYQYWGKKTERKTIEN
>SAV0750 similar to comF operon protein 1
MMFQGIQYARRQGDNIAIVSPRVDVVVEISKRIKDAFLNEDIDILHQQSS
QQFEGHFVVCTVHQLYRFKQHFDTIFIDEVDAFPLSMDKSLQQALKSSSK
VEHATIYMTATPPKQLLSEIPHENIIKLPARFHKKSLPVPKYRYFKLNNN
KIQKMLYRILQDQINNQRYTLVFFNNIETMIKTFSVYKQKITKLTYVHSE
DVFRFEKVEQLRNGHFDVIFTTTILERGFTMANLDVVVIDAHQYTQEALI
QIAGRVGRKLECPAGKVLFFHEGVSMNMIQAKKEIQRMNKLALKRGWIDE
>SAV1785 truncated transposase
MSRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGR
RIEKLLHDSIRMMWLAQDQTPSYKTINRFRVNPNTDALIESLFIQFHSQC
LKQNLIDNNSIFIDGT
>SAV2081 ATP-dependent RNA helicase
MQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGT
GKTGAFGIPLIEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQV
VTVFGGMPIERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILD
EADEMMNMGFIDDMRFIMDKIPAVQRQTMLFSATMPKAIQALVQQFMKSP
KIIKTMNNEMSDPQIEEFYTIVKELEKFDTFTNFLDVHQPELAIVFGRTK
RRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKNDQINILVATDVA
ARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEMD
YIRQIEDANGRKMSALRPPHRKEVLQAREDDIKEKVENWMSKESESRLKR
ISTELLNEYNDVDLVAALLQELVEANDEVEVQLTFEKPLSRKGRNGKPSG
SRNRNSKRGNPKFDSKSKRSKGYSSKKKSTKKFDRKEKSSGGSRPMKGRT
FADHQK
>SAV1390 truncated transposase
MKYIKAQINQKLSEPETKKIYSHRKIYVEPVFGFMKVILGFTRMSVRGIN
KVKRELGFVLMALNIRKIAAQRAVHYKIHIKKANFHQIINRNQLFYIA
>SAV1440 putative 5'-3' exonuclease
MPNKILLVDGMALLFRHFYATSLHKQFMYNSQGVPTNGIQGFVRHIFSAI
HEIRPTHVAVCWDMGQSTFRNDMFDGYKQNRSAPPEELIPQFDYVKEISE
QFGFVNIGVKNYEADDVIGTLAQQYSTDNDVYIITGDKDLLQCINDNVEV
WLIKKGFNIYNRYTLHRFNEEYALEPQQLIDIKAFMGDTADGYAGVKGIG
EKTAIKLIQQYQSVENVVENIDALSAGQRNKINDNLDELYLSKRLAEIHT
QVPIDSEALFEKMSFATTLNHILSICNEHELHVSGKYISSHF
>SAV1587 conserved hypothetical protein
MSDNIVAIYGDVPELVEKQSAEIISQFLKSDRDDFNFVKYNLYETEIAPI
VEETLTLPFFSDKKAILVKNAYIFTGEKAPKDMAHNVDQLIEFIEKYDGE
NLIVFEIYQNKLDERKKLTKTLKKHARLKKIEQMSEEEIKKWIQSKLNEN
FKDIKRDALDLFIELTGINFNIVSQEIEKLILFLGDRPTINKQDVNQIIN
RSLEQNVFLLTEYIQKRKKEQAIHLVKDLITMKEEPIKLLALITSNYRLF
YQCKILSQKGYSGQQIAKTIGVHPYRVKLALGQVRHYQLDELLNIVDACA
ETDYKLKSSYMDKQLILELFILSL
>SAV1433 similar to cell wall enzyme EbsB
MAKINFDAATKGNPGISTCAIVIKEDKQHYTYTHELGEMDNHTAEWAACI
YALEHARELNVQNALLYTDSKLIADSIEAGYVKNANFKPYFDQIEIFEKD
FDLLFVKWIPREQNKEANQHAQQALYKLIKKNK
>SAV0488 conserved hypothetical protein
MDSHFVYIVKCSDGSLYTGYAKDVNARVEKHNRGQGAKYTKVRRPVHLVY
QEMYETKSEALKREYEIKTYTRQKKLRLIKER
>SAV0076 hypothetical protein
MLMEKILYQTDEFKLKPSGWYKTIPPKKDGGTEFEIMLSGPIAFTDRFID
PATRKEKVFLSDLNNIELVEKASILTALQLPSLIEYGFTINEKHIRDLGF
VLQQMRSTTPLSTIYSGVGMLHTLLGPLISLDQPYFSNEITNSTSIICDN
KYDLIPKGNLSEWLQMYKEEVHGNLSLELDVLFGVSSLVTAFLKYHNNVE
FSGTIFSFTGQSSTGKSTAAMLAASVAGNPTKGTENLFRSWNATRNALEG
YLSGNYGVPIVLDELSAATFHDTTGLLYSFAEGQGRQRANINGDVKTPKN
>SAV2488 similar to putative helicase
MSSKKEAYDLADKLSSKGIKSVALTGDDSVNYRQIVIEKLKEGKINYIIT
VDLFNEGIDIPEVNQVVMLRPTESSIIFIQQLGRGLRKSANKEYVTVIDF
IGNYKTNYLIPIALSGDQSQNKDNYKKFLTNNDSINGVSTINFEEVAKKQ
IYNSLDAVSLNQNKLILKAYEEVENRLGHMPLLMDFIQQHSIDPSVIFSK
FSNYYEFLLRYKKIDALLTENESKNLVFFSRQIAPGLKRIDSLVLEELLK
NELTYDELKNKMLNEVKDITEDDIDTSLRILDFSFYNAGIEKIYGSPIIE
CNERMIRLSDAFTNALSNQTFKIFLEDLIELSKYNNEKYQKGKNGLILYN
KYSREDFSKIFNWNKNGSSVIMGYMIRSQEMPIFITYDKHEDISDSTKYE
DEFLSQDELKWFTKSNRTLKSKEVQKILSHRAKGIKMYIFVQKKDDDGIY
FYYLGTAGYIEGSEKQDKMPNGSNVVTMDLALDKAVRDDIYRYITN
>SAV0026 hypothetical protein
MSDNLSLFIDYINDNIIYGSEIKREKLENLFNQFAIKNVEKNIVYDELKS
LDITIIESQDSYKNKLKRLFSVLLQSKKI
>SAV0491 putative deoxyribonuclease
MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFNKSTIERAMKLI
DEYDFLYGIIGWHPVDAIDFTEEHLEWIESLAQHPKVIGIGEMGLDYHWD
KSPADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEEHAEEVGG
IMHSFSGSPEIADIVTNKLNFYISLGGPVTFKNAKQPKEVAKHVSMERLL
VETDAPYLSPHPYRGKRNEPARVTLVAEQIAELKGLSYEEVCEQTTKNAE
KLFNLNS
>SAV1522 probable exodeoxyribonuclease VII small subunit
MTKETQSFEEMMQELEQIVQKLDNETVSLEESLDLYQRGMKLSAACDTTL
KNAEKKVNDLIKEEAEDVKNDESTDE
>SAV1627 similar to ATPase, AAA family
MSTEPLASRMRPKNIDEIISQQHLVGPKGIIRRMVDTKKLTSMIFYGPPG
IGKTSIAKAISGSTQYKFRQLNAVTNTKKDMQLVVEEAKMSGQVILLLDE
IHRLDKAKQDFLLPHLENGKIVLIGATTSNPYHAINPAIRSRAQIFELYP
LNDEDVRQALTRAIEDDENGLKTYQPKIDEDAMTYFSTQSQGDVRSALNA
LELAVLSADNDKDGYRHVTLQDAKDCLQKGAFVSDKDGDMHYDVMSAFQK
SIRGSDVNAALHYLARLIEAGDLPTIVRRLLVISYEDIGLASPNAGQRTL
AAIESAERLGLPEARIPLSQAVIELCLSPKSNSAMSAIDSALSDIRNGHV
GQIPNHLKDGHYQGAKDLGRSIGYKYPHQYVNGYVSQQYLPDKLKNKIYY
EPKTTSKSEQQLKEIYNNLLKQRP
>SAV0966 similar to ATP-dependent nuclease subunit B
MTLHAYLGRAGTGKSTKMLTEIKQKMKADPLGDPIILIAPTQSTFQLEQA
FVNDPELNGSLRTEVLHFERLSHRIFQEVGSYSEQKLSKAATEMMIYNIV
QEQQKYLKLYQSQAKYYGFSEKLTEQIQDFKKYAVTPEHLEHFIADKNMQ
TRTKNKLEDIALIYREFEQRIQNEFITGEDSLQYFIDCMPKSEWLKRADI
YIDGFHNFSTIEYLIIKGLIKYAKSVTIILTTDGNHDQFSLFRKPSEVLR
HIEEIANELNISIERQYFNQLYRFNNQDLKHLEQEFDVLQINRVACQGHI
NILESATMREEINEIARRIIVDIRDKQLRYQDIAILYRDESYAYLFDSIL
PLYNIPYNIDTKRSMTHHPVMEMIRSLIEVIQSNWQVNPMLRLLKTDVLT
ASYLKSAYLVDLLENFVLERGIYGKRWLDDELFNVEHFSKMGRKAHKLTE
DERNTFEQVVKLKKDVIDKILHFEKQMSQAETVKDFATAFYESMEYFELP
NQLMTERDELDLNGNHEKAEEIDQIWNGLIQILDDLVLVFGDEPMSMERF
LEVFDIGLEQLEFVMIPQTLDQVSIGTMDLAKVDNKQHVYLVGMNDGTMP
QPVTASSLITDEEKKYFEQQANVELSPTSDILQMDEAFVCYVAMTRAKGD
VTFSYSLMGSSGDDKEISPFLNQIQSLFNQLEITNIPQYHEVNPLSLMQH
AKQTKITLFEALRAWLDDEIVADSWLDAYQVIRDSDHLNQGLDYLMSALT
FDNETVKLGETLSKDLYGKEINASVSRFEGYQQCPFKHYASHGLKLNERT
KYELQNFDLGDIFHSVLKYISERINGDFKQLDLKKIRQLTNEALEEILPK
VQFNLLNSSAYYRYLSRRIGAIVETTLSALKYQGTYSKFMPKHFETSFRR
KPRTNDELIAQTLTTTQGIPINIRGQIDRIDTYTKNDTSFVNIIDYKSSE
GSATLDLTKVYYGMQMQMMTYMDIVLQNKQRLGLTDIVKPGGLLYFHVHE
PRIKFKSWSDIDEDKLEQDLIKKFKLSGLVNADQTVIDALDIRLEPKFTS
DIVPVGLNKDGSLSKRGSQVADEATIYKFIQHNKENFIETASNIMDGHTE
VAPLKYKQKLPCAFCSYQSVCHVDGMIDSKRYRTVDETINPIEAIQNINI
NDEFGGE
>SAV2209 hypothetical protein
MEKIENEIVNKTYLAINSLEELRNMIGIKSDYFYKCLYVNDHFYNVIKIP
KRKKDEYRELMIPNMALKNIQRWILDNVLYRRQVHKCATGFVPRKSIVNN
AIPHVGQKYILKMDIENFFPSITFKQVRKIFSEMGYKFELATALANLCTV
NNQLPQGAPTSPYIANIIFYNIDKRIFSYCQKNNLRYTRYADDITISGSN
KVSFSKEIIREIVNQYNFRINESKTIMFKPGDRKKVTGIIVNEKISVPKT
LIREVRKQIYFVNKFGLEEHLIRNNYSLDYEQQFIMSIYGKISFIKMIDF
KKGVSLQKKFNEVLGNIESSNMYRDNIDFDDIELHWIN
>SAV1489 hypothetical protein
MNKINDRDLTELSSYWVYQDINKDNDFTVNGKRFKQVDEYNDNGNKNKKG
ASDLKIYELLDEKGKPTGEQTMIYQGTSNEAINPNNPLKSLDIGDDWLQN
AKLMDNSNKSTDYLKQSDEFADLYRDKLNDANKLSKYNFTQKYGVSPNNY
KNKTIVADGGNSEGGAGAKYQGAKHPNEKVVATDPAMVPYAAWQKFARPR
FDNMISFNSTNDLLTWLQDPFIKDMPGKRVNISDGVPRLDALIDSHVGYK
RKLNRKDNTYDTVPLIKIKSVKDTEIKNGKKVKKTINITLDMDGRIPINV
WTGDSIARSGRGTLIKLNLENLDALSKLITGETSGMLAECVIFLNESFNI
SENENKNFADRKQQLSEGFKDKINLFQLEEMERTLISKINSLEEVADETI
ESISAVKHLLPDFALDALKERINELFKGIKSFIEKVYDSIDNEILEIFKN
IDHDFRDGVSEEMMKHLKVVKQNIERIKNQNDIYGRQIAEIRSIMKQQDA
TILDGNFQINCSGENMVQGLVIPSNYLGRKMKILKDHIDDGIKKIADYVQ
SIYDEYASKIVDVIKYLINTIPKIRKNLRHAIEMLNVKKKEFLSLIPNVT
CNYIKTKLEELDNTLGKWEPFLNDLKAVSPILDNHLDDIVKNMKPLIVQM
LFEPSHYDDMFILNTQAHARLDQMAQQFEVVCNGLNENEGQAIQTMDQSA
SLIRSNLIQVKEQLEKLAVY
>SAV1523 probable exodeoxyribonuclease VII large subunit
MSDYLSVSALTKYIKYKFDQDPHLQSVLIKGELSNFKKHSSGHLYFNVKD
KESVISAMMFKGSASKLNFEPKEGDEVLLEARVSVFERRGNYQIYVNKMQ
LDGIGNLYQKLEALKKKLTEEGCFDKANKKSIPKFPKKIAVLTASTGAAI
RDIHSTINSRFPLAEQIQISTLVQGEKAKDDIIEKIEYADSLGVDTIIVG
RGGGSIEDLWNFNEEAVVRAIYNCKTPIISAVGHETDFTLSDFAADIRAA
TPTQAAVIATPDQYELLQQIQQYQFTLTRFIKKHLEQQRKHVEHLSSYYK
FKQPTLLYDQQIQRRDDLEKRLKQQIQATFEQQRHRLMLLQQRYNLKALL
SSVNQEQQNNLQLTNQLVKLLNSKILSYKNDLKNKVENLNNLSPTNTMLR
GYAIVNKKDEVITSTKDLTENDQLTLTMKDGLVDAKVTKVRCNND
>SAV2489 similar to putative helicase
MSRLLNDFNQSLKKGFIDKDISHKGNYTPKLLVNNKNEKVLSTIIDELQK
CETFYFSVAFITESGLASLKAQLLDLSNKGVKGKILTSNYLGFNSPKMYG
ELLKLKNVEVRLTDIAGFHAKGYIFEHKDYSSMVIGSSNLTSNALKVNYE
HNVLLSTMKNGDLVDSVKNEFELLWQKSTPLTEQWINSYKESFEYRSLEK
LAEVEQTQMLLADKVKKSVEIVPNLMQAEALRSLKAIRDKTKDKALIISA
TGTGKTILCALDVREVNPNKFLFIVHNEGILNRAKEEFKKVLPIKNDSDF
GLLTGKHRDVDAKYLFATIQTLSRDDNFKQFDENEFDYIVFDEAHRSAAS
TYQRVFNYFKPKFMLGMTATPERSDELSIFELFDYNIAYEIRLQAALESD
ILCPFHYFGVTDYVHQGIKEDDVTKLRYLTSDERVNYIIQKTD
>SAV2012 similar to bacteriophage terminase small subunit
MSELTAKQARFVNEYIRTLNVTQSAIKAGYSANSAHVTGCRLLKKPHIKQ
YIQEQKDKVIDENVLTAKELLHVLTNAAVGDETETKEVVVKRGEYKENPQ
SGKVQLVYNEHVELVEVPIKPSDRLKARDMLGKYHKLFTDKHDINGNVPI
FINIGEWDGDDEDLDKTVQEVSNANPNHTVIVDDIPLED
>SAV0873 phi PVL ORF 50
MAKTARIVRIHDKPYRFSKFEMELIESHGITPGMVSKRVKDGWELHEAMD
APEGMRLSEYREKKTIERLEQARLERKLERQRKKEAELRRKKPHLFNVPQ
KHSRDPYWFDTTYNQMFKKWQEV
>SAV0892 hypothetical protein
MNQGNNPFGKSIAQSIEKTNKVIKGDFTQDNIIDLEALLEDDELEANAFI
SKTQNRSLLRKIVDPETKERIYDRNSDTLDGLPVVNLKSSNLKRGELITG
DFDKLIYGIPQLIEYKIDETAQLSTVKNEDGTPVNLFEQDMVALRATMHV
ALHIADDKAFAKLVPADKKTDSVPGEV
>SAV1872 conserved hypothetical protein
MEQKKLSEMSEPELRHEIQLYKEKMRKAEMNGILNEYDVYQSKVIVAESY
LVDRKKIEIGKIYKLTDGSNQYFKVERLKGIFAWGFRFNSDEPEEGLPIA
LLQL
>SAV0467 conserved hypothetical protein
MIKCVCLVEETADKILLVQVRNREKYYFPGGKIEEGESQVHALLREVKEE
LNLTLTMDEIEYIGTIVGPAYPQQDMLTELNGFRALTKIDWENVTINNEI
TDIRWIDKDNDALIAPAVKVWIETYGGKHDK
>SAV2215 truncated IS232 IstA protein homolog
MKVKLRLTCVYSAFRAYVLKHVVFNRYFMKGYQQMSPKGTTRIETKTGHQ
AQFDWKEGINFKTNDNQIVSLNIGVLLLSYSRFVIMKVTMNKSSDVLFNL
FTQAFELM
>SAV2212 truncated IS232 IstB protein homolog
MSAFDFNFQPSINQQDVLDFTDLRFIGKYENIVFLDSNVVSKNRISTYFI
KCHHLKENLRKAKLENSLENRLKHYSKYKLLIIDEIGYLPIGSEAAKIFF
QINRFKV
>SAV1712 conserved hypothetical protein
MAEQQTIMERLFHTLDEKAKTLNNENGQSFIENLGLAMEQVYTNERGLLE
QSTLQDRRKAFQFAYLSLMQEEKIQANHQITPDSIGLILGFLVERFMNNQ
EELHIVDIASGAGHLSATVKEVLPEIAVMHHLIEVDPVLSRVSVHLANFL
EIPFDVYPQDAIMPLPLEEADIVIGDFPVGYYPIDERSKEFKLGFEEGHS
YSHYLLIEQAINALKDAGYAFLVVPSNIFTGEHVKQLEKYIATETEMQAF
LNLPPTLFKNEKARKSILILQKKKSGETKPVEVLLANIPDFKNPSQFQGF
MTELNQWMDTNRPKK
>SAV1794 conserved hypothetical protein
MRVKFRDKDNRQVNLTFKKDNEIADGNHVLAIPTFKNQLLFTKHNLRGIE
FPGGKRERGESSAEAVTRELYEETGAKVKNIHYIAQYTIETHDQTDFVKD
VYFIEVESLVSKNDYLETAGPVLFNCINDIELAQRSFLLQDSTILKCVER
VQSLGFYQT
>SAV1364 DNA-damage repair protein
MYNYHLLEDRDVLCIDQKSFFASVSCIEKGLDPLETKLAVVADTKRQGSV
ILAATPKLKELGIKTGSRLFEIPHRNDIYIINPSMRKYLNVSVAISKIAL
RYIPPEDLHQYSIDEFFMDVTDSYHRFSSTVHAFCERLKREIYEETGIYC
TVGIGSNMLLSKIAMDVEAKHSQNGIAEWRYQDVPTKLWPIQPLRDFWGI
NRRTEAKLNKRGIFTIGDLAKYPYKFLKKEFGILGVDMHLHANGIDQSKV
REKHKISNPSICKSQILMRDYHFDEAKVVMQELIEDVASRVRARKKVART
IHFAFGYSDEGGVHKQYTLKDPTNLEKDIYKVVMHFADKLCNKQALYRTL
SISLSQFINEDERQLSLFEDEYQRKRDECLAKTIDQLHLKYGKGIVSKAV
SFTEAGTKHGRLGLMAGHKM
>SAV0284 hypothetical protein
MLMNSVIALTFLTASSNNGGLNIDVQQEEEKRINNDLNQYDTTLFNKDSK
EVNDAIAKQKKERQQQIKNDMFQNQASHSTRLNETKKVLFSKSNLEKTSE
SDKSPYIQNKQEKKIFPYILMSVGAFLTLGFVIFSIHKGRRTKNESARKS
NI
>SAV1124 similar to methyltransferase
MRVIAGKHKSKALESMEGRNTRPTMDKVKEGIFNSLYDVSGIGLDLFAGS
GALGIEALSRGMDKVIFVDQNFKAVKVIKSNLANLDLEAQSEVYKNNADR
ALKALSKRDIQFDVIFLDPPYNKGLIDKALKLISEFNLLKENGIIVCEFS
NHEEIDYQPFNMIKRYHYGLTDTLLLEKGE
>SAV0408 putative phage replication protein
MENEKIWIKELKEKRLAYGVSQNKLAVASHITRPYLSDIETGKAVPTQQV
KEDLLNALERFNPDNPLEMLFDYVRIRFPTNDVAQIIGEVLRLNMDYMLH
EDFGYYSYPEHYRFGDIVVLVSHDVSKGVLLELKGKGCRQFENFLLAQHR
SWYDFFQDCMEHKGIFKRLDLAINDKTGILNIPDLAKKCKQEECISVFRS
FKNYRSGELVHRDEKPYMGNTLYIGSLKSEVYFCIYEKDYEQYVKNDVPL
EDAEVKNRFEIRLKNDRATQAMKDLLAHQQAEKTAFEIINRYIRFADKDD
TKRRSDWKTNERWEWFIGKNRGALRLTTQPEPYSFERTLNWLHHQVAPTL
KIASILDVLNGTTIISTMIQEAKLTEKHEKLIEQQHLAMEDLIT
>SAV2490 similar to mutator protein mutT
MKKVINVVGAIIFSDNKILCAQRSEEMSLPLMWEFPGGKIEKNETEKEAL
IREIREEMKCDLIVGDKVITTEHEYDFGIVKLTTYKCTLNKELPTLTEHK
SIEWLSINELDKLNWAPADIPAVNKIMTEG
>SAV1887 hypothetical protein
MNYVERYIEQFLRATVRNNIKHYLLMLDEKMKNLDDYMRYLITKKEQLSK
LIDSLMLTLENKYIDIAEAFQIQCAREINNQEIENIKSELNKVEAYYAQI
ETQIQQTSTEKIATEKTSYLINYMNAVA
>SAV1923 truncated transposase
METSVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIIL
YAYTQSV
>SAV1738 hypothetical protein
MTQQQNDKRTLKNKHTYQNEPLPNRKDFVVSFITGALVGSALGLYFKNKV
YQKADDLKVKEQELSQKFEERKTQLEETVAYTKERVEGFLNKSKNEQAAL
KAQQAAIKEEASANNLSDTSQEAQEIQEAKREAQAEADKSVAVSNEESKA
SALKVQQAAIKEEASANNLSDTSQEAQEIQEAKKEAQAETDKSAAVSNEE
PKAVALKAQQAAIKEEASANNLSDTSQEAQEVQEAKKEAQAEKDSDTSTK
DASAAKVEVSKPESQAERLANAAKQKQAKLTPGSKESQLTEALFAEKPVA
KNDLKEIPQLVTKKNDVSETETVNIDNKDTVKQKEAKFENGVITRKADEK
TTNNTAVDKKSGKQSKKTTPSNKRNASKASTNKTSGQKKQHNKKSSQGAK
KQSSSSKLTQKNNQTSNKNSKTTNAKSSNASKTPNAKVEKANSKIEKRTF
ND
>SAV0413 hypothetical protein
MTNIFEKIVNDLNLEQKDVVESEDNLYVNACPGSGKTRVLTRKIAYQAIK
HDGSLKRIIAITYTNRAAEEIKERLSLLSIDDDINIWVGTIHQFCLEFII
YPFKMNLSRVSKGFTIIDDYTQRAYVSQINNMLNLNLKTYELNKIDLSLS
HDFKINEVQYTQVSEMYHTMLEKNKEIDFDMILLVAYKILTVNSNVARNI
ASNIRAIYVDEFQDTRELQYNVIAKLLQNNPQIQSMFVGDIDQAIYGSLD
GIAKSVEELEMLTSHTFQSKTLHGCYRSNQRLVDFYSNFQSCPYEIESRG
NNKNDRGFISYDCKVTKEDLPNIIKNIIKEKIESGIHEKDICVLAPQHYP
LFSLGEYLKKELPYCNFDAINISPIKVNNHSLFFKLAILYFTESGEKVRR
RKLIANDILIILKNEFGIEVKDYFIDLDLLQLINSVKRMYSGDDNGVDLY
KFVTKHIFVNLNIDEKNYPSIFKHYLFFINEVEDRIKNNSLSSSVSSFKK
MFKSRDGITLTTAHKVKGNEYDTVIAINLLNGKIPHWNEIFNVSDKGISS
ARKLLYVICSRAKNNLFLFSEVGYFTSKGDLLYPTQLLDKIEFDYNI
>SAV1804 truncated transposase
MKAKYKNHQIETNEKRIKNHLNRAFNREQPMETLVSDLTYVKVGGTWHYI
CLFIDLFNREIVGYSAGKNKDANLVSKAISRINHNLEQIKLFHTDRDKEF
DNHLIDEVLETFKIKRSLSTKGCPYDNAVAEATMKAMKTEFVKQMQFENL
EQLETELFDYVNWYNNFRPHSSLQYLTPVAFKNIHMKTV
>gid:876316  SAVP006  conserved hypothetical protein
MKKIILPILIVSLSVILVSCNNNDSEHHNDNNSSDTNTSENKDNEASNEI
DEKTNTSDSADNSESSNKQNKEKNDNKKQEKNNDSNKKQQSTDKNKSYLN
NFNSKEIEYARVWYQLISTRNDLKGIKNVYVTEIPKGSKVNPQAKNSAIY
KEKVVKLEAPMRAGGSVTYSSNGDGTINVYNNIPYKWENSQNSDYSQMNK
ITKKAIEENIETVYIKPYDNKTVAKLASKIRYNK
>SAV2547 adaB, probable methylated DNA-protein cysteine methyltransferase
MEYKSYYDSPVGRLELLSDGVSLTAVLFENQQGDGTREENTSLAIFREAT
QWLDAYFKGDNPEITIPLKPTGSHFQQCVWNELRQVPYGTLTTYGAIAKK
VGKVLDKPKMSAQAVGGAVGSNPLSIIVPCHRVVGKTGSLTGFGGTINNK
IKLLELENIDMSKLYIPKHSTKP
>SAV0062 ccrA, cassette chromosome recombinase A
MKQVIGYLRQSTMKQQSLAAQKQAIEAIAEKHHIQHINFYSDKQSGRKDN
RSGYRQMTQLIQQGQCDILCCYRLNRLHRNLKNALKLIKLCQTYHVHILS
VHDGYFDMDQAFDRFKLNIFISLAELESDNIGEQVRNGLQEKAKQGRLIT
THAPFGYEYHNGAFIINQNESPTVKAVFNYYIKGHGYKKIAQLLEEDNTY
INRQPYQVRNIIINPNYCGRVNNQYGQFDNMFPSIVSTSIYEQAQRLRSQ
KQIKQTSSDNQLKQKIKCPCCNTTLTNMTVRKKNHTLRYYVCPKNMNASR
FVCDFKGINAQTLEDKVLEVCKDFYQNQRIYTKIKGAIDKRIKRQRNIEK
HHTLTQEQLIEKLAQGIIDAETFREQTQSLRQQPQRTTSINGHQIQHTIQ
NIIQKRFTLNILYPYIETIHITKDKNLIGIYFKNEPLNIVNQTMQSSIA
>SAV0061 ccrB, cassette chromosome recombinase B
MQQLKTKRVGIYVRVSTEMQSTEGYSIDGQINQIKEYCDFHHFEVKDIYA
DRGISGKSMNRPELQRILKDAKEGYIDCVMVYKTNRLARNTSDLLKIVED
LHKQNVEFFSLSERMEVNTSSGKLMLQILASFSEFERNNIVENVFMGQTR
RAQEGYYQGNLPLGYDKIPNSKHELMINQHEANIVKYIFESYAKGHGYRK
IANALNHKGYVTKKGKPFSISSITYILANPFYIGKIQFAKYKDWSEKRRK
GLNDKPVIAEGKHSPIINQDLWDKVQMRKKQVSQKPQVHGKGTNLLTGII
HCPQCGAPMAASNTTNTLKDGTKKRIRYYSCSNFRNKGSKVCSANSVRAD
VIEDYVMKQILEIVKSDKVIQRVVTHVNQENQVDGAALHHDIAYKQQQYD
EVQIKLNNLIKTIEDNPDLTSVIRPSIQKYEKQLNDITNQINQLKNQQNE
DKPLFDAKEISKLLQHIFHDIKHIEKSRLKALYLSVIDRIDIKKDGNHKK
QFYVTLKLNNEIIKQLFNNKQLDEVHLSTSSLFLPQTLYLTI
>SAV0230 coa, staphylocoagulase precursor
MKKQIISLGALAVASSLFTWDNKADAIVTKDYSKESRVNEKSKKGATVSD
YYYWKIIDSLEAQFTGAIDLLEDYKYGDPIYKEAKDRLMTRVLGEDQYLL
KKKIDEYELYKKWYKSSNKNTNMLTFHKYNLYNLTMNEYNDIFNSLKDAV
YQFNKEVKEIEHKNVDLKQFDKDGEDKATKEVYDLVSEIDTLVVTYYADK
DYGEHAKELRAKLDLILGDTDNPHKITNERIKKEMIDDLNSIIDDFFMET
KQNRPNSITKYDPTKHNFKEKSENKPNFDKLVEETKKAVKEADESWKNKT
VKKYEETVTKSPVVKEEKKVEEPQLPKVGNQQEVKTTAGKAEETTQPVAQ
PLVKIPQETIYGETVKGPEYPTMENKTLQGEIVQGPDFLTMEQNRPSLSD
NYTQPTTPNPILEGLEGSSSKLEIKPQGTESTLKGIQGESSDIEVKPQAT
ETTEASQYGPRPQFNKTPKYVKYRDAGTGIREYNDGTFGYEARPRFNKPS
ETNAYNVTTNQDGTVSYGARPTQNKPSETNAYNVTTHANGQVSYGARPTQ
KKPSKTNAYNVTTHANGQVSYGARPTQKKPSKTNAYNVTTHANGQVSYGA
RPTYKKPSETNAYNVTTHANGQVSYGARPTQKKPSETNAYNVTTHADGTA
TYGPRVTK
>SAV1455 dinG, probable ATP-dependent DNA helicase
MGMATYAVVDLETTGNQLDFDDIIQIGITFVRNNQIIDTYHSMIRTNLEI
PPFIQALTSIEENMLQQAPYFNQVAQEIYDKIKDCIFVAHNVDFDLNFIK
KAFKDCNIQYRPKKVIDTLEIFKIAFPTDKSYQLSELAEAHGITLANAHR
ADEDAATTAKLMILAFEKFEKLPLDTLKQLYYLSKQLKYDLYDIFFEMVR
QYDAKPLDKSYEKFEQIIYRKQVDFKKPTTNYNGSLKSLYSKAVDQLGLT
YRPQQLYLAETILDQLMHSEKAMIEASLGSGKSLAYLLAALMYNIETGKH
VMISTNTKLLQSQLLEKDIPAMNEALNFKINALLIKSKSDYISLGLISQI
LKDDTSNYEVNILKMQLLIWITETPSGDIQELNLKGGQKMYFDQKIETYV
PARHDVHYYNFIKRNAQNIQIGITNHAHLIHSDVENSIYQLFDDCIVDEA
HRLPDYALNQVTNELSYADIKYQLGLIGKNENEKLLKAIDQLEKQRILEK
LDIAPIDIFGLKASMNEIHELNEQLFSTIFTIINDSDVYDDDIHRFHNVF
TFETKDILKDLHAIIDKLNKTLEIFNGISHKTVKSLRKQLLYLKDKFKNI
EQSLKAGHTSFISIKNLSQKSTIRLYVKDYAVKDVLTKQVLEKFKSLIFI
SGTLKFNHSFEAFKQLFNKDVHFNTFEVNTSLQSAKNTSVFIPSDVASYQ
YKNIDEYVASIVSYIIEYTTITSSKCLVLFTSYKMMHMVQDMLNELPEFE
DYVVLTQQQNQNYKIVQQFNNFDKAILLGTSTFFEGFDFQANGIKCVMIA
KLPFMNKHNAKYWLMDSEFTSTFKEYVLPDAVTRFRQGLGRLIRNENDRG
IIVSFDDRLINSNYKNFFEQTLENYRQKKGDIQQFGKLLRQIQKKKK
>SAV0001 dnaA, chromosomal replication initiator protein
MSEKEIWEKVLEIAQEKLSAVSYSTFLKDTELYTIKDGEAIVLSSIPFNA
NWLNQQYAEIIQAILFDVVGYEVKPHFITTEELANYSNNETATPKETTKP
STETTEDNHVLGREQFNAHNTFDTFVIGPGNRFPHAASLAVAEAPAKAYN
PLFIYGGVGLGKTHLMHAIGHHVLDNNPDAKVIYTSSEKFTNEFIKSIRD
NEGEAFRERYRNIDVLLIDDIQFIQNKVQTQEEFFYTFNELHQNNKQIVI
SSDRPPKEIAQLEDRLRSRFEWGLIVDITPPDYETRMAILQKKIEEEKLD
IPPEALNYIANQIQSNIRELEGALTRLLAYSQLLGKPITTELTAEALKDI
IQAPKSKKITIQDIQKIVGQYYNVRIEDFSAKKRTKSIAYPRQIAMYLSR
ELTDFSLPKIGEEFGGRDHTTVIHAHEKISKDLKEDPIFKQEVENLEKEI
RNV
>SAV1685 dnaB, chromosome replication initiation/membrane attachment protein
MGRQAFEFGLRPKDQFKVMQHFDLNTNHLEVLNRLYTPLIGTQAVGLYHF
MTQFVKDSHNETLILSHYIFMNELKINLLEFRQQMDLLEAIGLLKAFVKH
DEQETQFVYQLIQPPSAHLFFNDPMLSIFLYSEVEHRRFHELKKYFEYQQ
IDLSEFKQVTRQFTDVFKVPSTKIDIDTSDIPINEPYQGIDLSNESFDFE
MLRQMLGKHFISQDIVTKDAKRLITQLATLYGLTADGMKHVILNSITSGQ
QLSFEEMRKQARSYYLMEHENQMPKLQVKSPATSSSTGKSSEVNPKPQSD
EWFELLEQTSPIDMLASWSESEPTISQKTMVEELIEREKMSFGVINILLQ
FVMLKEDMKLPKAYILEIASNWKKKGIKTAKEAYNYAKKVNQPKNEGSSG
NYQKRGSYYGQRNRISKEKTPKWLENRDKPSEEDSAKDNSVDDQQLEQDR
QAFLDKLSKKWEEDSR
>SAV0016 dnaC, replicative DNA helicase
MDRMYEQNQMPHNNEAEQSVLGSIIIDPELINTTQEVLLPESFYRGAHQH
IFRAMMHLNEDNKEIDVVTLMDQLSTEGTLNEAGGPQYLAELSTNVPTTR
NVQYYTDIVSKHALKRRLIQTADSIANDGYNDELELDAILSDAERRILEL
SSSRESDGFKDIRDVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGF
NRNDLIILAARPSVGKTAFALNIAQKVATHEDMYTVGIFSLEMGADQLAT
RMICSSGNVDSNRLRTGTMTEEDWSRFTIAVGKLSRTKIFIDDTPGIRIN
DLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRASDNRQQEVSEISRTLKA
LARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDADIVAFLYR
DDYYNRGGDEDDDDDGGFEPQTNDENGEIEIIIAKQRNGPTGTVKLHFMK
QYNKFTDIDYAHADMM
>SAV1703 dnaE, DNA polymerase III, alpha chain
MVAYLNIHTAYDLLNSSLKIEDAVRLAVSENVDALAITDTNVLYGFPKFY
DACIANNIKPIFGMTIYVTNGLNTVETVVLAKNNDGLKDLYQLSSEIKMN
SMENVSFELLQQFSSNLIIIFKNVADEHRDIVQVFDSHEDTYLDHQSVLV
QGIKHVWIQNVCYQTRQDADTISALAAIRDNAKLDLIHDQEDFGAHFLTE
KEIKQLDINQEYLTQVDVIAQKCNAELKYHQSLLPQYQTPNDESAKKYLW
RVLVTQLKKLELNYDVYLERLKYEYKVITNMGFEDYFLIVSDLIHYAKTN
DVMVGPGRGSSAGSLVSYLLGITTIDPIKFNLLFERFLNPERVTMPDIDI
DFEDTRRERVIQYVQEKYGELHVSGIVTFGHLLARAVARDVGRIMGFDEV
TLNEISSLIPHKLGITLDEAYQIDDFKKFVHRNHRHERWFSICKKLEGLP
RHTSTHAAGIIINDHPLYEYAPLTKGDTGLLTQWTMTEAERIGLLKIDFL
GLRNLSIIHQILIQVKKDLGINIDIEKIPFDDQKVFELLSQGDTTGIFQL
ESDGVRSVLKKLKPEHFEDIVAVTSLYRPGPMEEIPTYITRRHDPSKVQY
LHPHLEPILKNTYGVIIYQEQIMQIASTFANFSYGEADILRRAMSKKNRA
VLESERQHFIEGAKQNGYHEDISKQIFDLILKFADYGFPRAHAVSYSKIA
YIMSFLKVHYPNYFYANILSNVIGSEKKTAQMIEEAKKQGITILPPNINE
SHWFYKPSQEGIYLSIGTIKGVGYQSVKVIVDERYQNGKFKDFFDFARRI
PKRVKTRKLLEALILVGAFDAFGKTRSTLLQAIDQVLDGDLNIEQDGFLF
DILTPKQMYEDKEELPDALISQYEKEYLGFYVSQHPVDKKFVAKQYLTIF
KLSNAQNYKPILVQFDKVKQIRTKNGQNMAFVTLNDGIETLDGVIFPNQF
KKYEELLSHNDLFIVSGKFDHRKQQRQLIINEIQTLATFEEQKLAFAKQI
IIRNKSQIDMFEEMIKATKENANDVVLSFYDETIKQMTTLGYINQKDSMF
NNFIQSFNPSDIRLI
>SAV1562 dnaG, DNA primase
MRIDQSIINEIKDKTDILDLVSEYVKLEKRGRNYIGLCPFHDEKTPSFTV
SEDKQICHCFGCKKGGNVFQFTQEIKDISFVEAVKELGDRVNVAVDIEAT
QSNSNVQIASDDLQMIEMHELIQEFYYYALTKTVEGEQALTYLQERGFTD
ALIKERGIGFAPDSSHFCHDFLQKKGYDIELAYEAGLLSRNEENFSYYDR
FRNRIMFPLKNAQGRIVGYSGRTYTGQEPKYLNSPETPIFQKRKLLYNLD
KARKSIRKLDEIVLLEGFMDVIKSDTAGLKNVVATMGTQLSDEHITFIRK
LTSNITLMFDGDFAGSEATLKTGQHLLQQGLNVFVIQLPSGMDPDEYIGK
YGNDAFTTFVKNDKKSFAHYKVSILKDEIAHNDLSYERYLKELSHDISLM
KSSILQQKAINDVAPFFNVSPEQLANEIQFNQAPANYYPEDEYGGYDEYG
GYIEPEPIGMAQFDNLSRQEKAERAFLKHLMRDKDTFLNYYESVDKDNFT
NQHFKYVFEVLHDFYAENDQYNISDAVQYVNSNELRETLISLEQYNLNDE
PYENEIDDYVNVINEKGQETIESLNHKLREATRIGDVELQKYYLQQIVAK
NKERM
>SAV1684 dnaI, primosomal protein
MKQFKSIINTSQDFEKRIEKIKKEVINDPDVKQFLEAHRAELTNAMIDED
LNVLQEYKDQQKHYDGHKFADCPNFVKGHVPELYVDNNRIKIRYLQCPCK
IKYDEERFEAELITSHHMQRDTLNAKLKDIYMNHRDRLDVAMAADDICTA
ITNGEQVKGLYLYGPFGTGKSFILGAIANQLKSKKVRSTIIYLPEFIRTL
KGGFKDGSFEKKLHRVREANILMLDDIGAEEVTPWVRDEVIGPLLHYRMV
HELPTFFSSNFDYSELEHHLAMTRDGEEKTKAARIIERVKSLSTPYFLSG
ENFRNN
>SAV0002 dnaN, DNA polymerase III beta chain
MMEFTIKRDYFITQLNDTLKAISPRTTLPILTGIKIDAKEHEVILTGSDS
EISIEITIPKTVDGEDIVNISETGSVVLPGRFFVDIIKKLPGKDVKLSTN
EQFQTLITSGHSEFNLSGLDPDQYPLLPQVSRDDAIQLSVKVLKNVIAQT
NFAVSTSETRPVLTGVNWLIQENELICTATDSHRLAVRKLQLEDVSENKN
VIIPGKALAELNKIMSDNEEDIDIFFASNQVLFKVGNVNFISRLLEGHYP
DTTRLFPENYEIKLSIDNGEFYHAIDRASLLAREGGNNVIKLSTGDDVVE
LSSTSPEIGTVKEEVDANDVEGGSLKISFNSKYMMDALKAIDNDEVEVEF
FGTMKPFILKPKGDDSVTQLILPIRTY
>SAV0478 dnaX, DNA polymerase III gamma and tau subunits
MNYQALYRMYRPQSFEDVVGQEHVTKTLRNAISKEKQSHAYIFSGPRGTG
KTSIAKVFAKAINCLNSTDGEPCNECHICKGITQGTNSDVIEIDAASNNG
VDEIRNIRDKVKYAPSESKYKVYIIDEVHMLTTGAFNALLKTLEEPPAHA
IFILATTEPHKIPPTIISRAQRFDFKAISLDQIVERLKFVADAQQIECED
EALAFIAKASEGGMRDALSIMDQAIAFGDGTLTLQDALNVTGSVHDEALD
HLFDDIVQGDVQASFKKYHQFITEGKEVNRLINDMIYFVRDTIMNKTSEK
DTEYRALMNLELDMLYQMIDLINDTLVSIRFSVNQNVHFEVLLVKLAEQI
KGQPQVIANVAEPAQIASSPNTDVLLQRMEQLEQELKTLKAQGVSVAPAQ
KSSKKPARGIQKSKNAFSMQQIAKVLDKANKADIKLLKDHWQEVIDHAKN
NDKKSLVSLLQNSEPVAASEDHVLVKFEEEIHCEIVNKDDEKRSSIESVV
CNIVNKNVKVVGVPSDQWQRVRTEYLQNRKNEGDDMPKQQAQQTDIAQKA
KDLFGEETVHVIDEE
>SAV1904 dnlJ, DNA ligase
MADLSSRVNELHDLLNQYSYEYYVEDNPSVPDSEYDKLLHELIKIEEEHP
EYKTVDSPTVRVGGEAQASFKKVNHDTPMLSLGNAFNEDDLRKFDQRIRE
QIGNVEYMCELKIDGLAVSLKYVDGYFVQGLTRGDGTTGEDITENLKTIH
AIPLKMKEPLNVEVRGEAYMPRRSFLRLNEEKEKNDEQLFANPRNAAAGS
LRQLDSKLTAKRKLSVFIYSVNDFTDFNARSQSEALDELDKLGFTTNKNR
ARVNNIDGVLEYIEKWTSQRESLPYDIDGIVIKVNDLDQQDEMGFTQKSP
RWAIAYKFPAEEVVTKLLDIELSIGRTGVVTPTAILEPVKVAGTTVSRAS
LHNEDLIHDRDIRIGDSVVVKKAGDIIPEVVRSIPERRPEDAVTYHMPTH
CPSCGHELVRIEGEVALRCINPKCQAQLVEGLIHFVSRQAMNIDGLGTKI
IQQLYQSELIKDVADIFYLTEEDLLPLDRMGQKKVDNLLAAIQQAKDNSL
ENLLFGLGIRHLGVKASQVLAEKYETIDRLLTVTEAELVEIHDIGDKVAQ
SVVTYLENEDIRALIQKLKDKHVNMIYKGIKTSDIEGHPEFSGKTIVLTG
KLHQMTRNEASKWLASQGAKVTSSVTKNTDVVIAGEDAGSKLTKAQSLGI
EIWTEQQFVDKQNELNS
>SAV0006 gyrA, DNA gyrase subunit A
MAELPQSRINERNITSEMRESFLDYAMSVIVARALPDVRDGLKPVHRRIL
YGLNEQGMTPDKSYKKSARIVGDVMGKYHPHGDLSIYEAMVRMAQDFSYR
YPLVDGQGNFGSMDGDGAAAMRYTEARMTKITLELLRDINKDTIDFIDNY
DGNEREPSVLPARFPNLLANGASGIAVGMATNIPPHNLTELINGVLSLSK
NPDISIAELMEDIEGPDFPTAGLILGKSGIRRAYETGRGSIQMRSRAVIE
ERGGGRQRIVVTEIPFQVNKARMIEKIAELVRDKKIDGITDLRDETSLRT
GVRVVIDVRKDANASVILNNLYKQTPLQTSFGVNMIALVNGRPKLINLKE
ALVHYLEHQKTVVRRRTQYNLRKAKDRAHILEGLRIALDHIDEIISTIRE
SDTDKVAMKSLQQRFKLSEKQAQAILDMRLRRLTGLERDKIEAEYNELLN
YISELETILADEEVLLQLVRDELTEIRDRFGDDRRTEIQLGGFEDLEDED
LIPEEQIVITLSHNNYIKRLPVSTYRAQNRGGRGVQGMNTLEEDFVSQLV
TLSTHDHVLFFTNKGRVYKLKGYEVPELSRQSKGIPVVNAIELENDEVIS
TMIAVKDLESEDNFLVFATKRGVVKRSALSNFSRINRNGKIAISFREDDE
LIAVRLTSGQEDILIGTSHASLIRFPESTLRPLGRTATGVKGITLREGDE
VVGLDVAHANSVDEVLVVTENGYGKRTPVNDYRLSNRGGKGIKTATITER
NGNVVCITTVTGEEDLMIVTNAGVIIRLDVADISQNGRAAQGVRLIRLGD
DQFVSTVAKVKEDAEDETNEDEQSTSTVSEDGTEQQREAVVNDETPGNAI
HTEVIDSEENDEDGRIEVRQDFMDRVEEDIQQSSDEDEE
>SAV0005 gyrB, DNA gyrase subunit B
MVTALSDVNNTDNYGAGQIQVLEGLEAVRKRPGMYIGSTSERGLHHLVWE
IVDNSIDEALAGYANKIEVVIEKDNWIKVTDNGRGIPVDIQEKMGRPAVE
VILTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYH
QAYKKGVPQFDLKEVGTTDKTGTVIRFKADGEIFTETTVYNYETLQQRIR
ELAFLNKGIQITLRDERDEENVREDSYHYEGGIKSYVELLNENKEPIHDE
PIYIHQSKDDIEVEIAIQYNSGYATNLLTYANNIHTYEGGTHEDGFKRAL
TRVLNSYGLSSKIMKEEKDRLSGEDTREGMTAIISIKHGDPQFEGQTKTK
LGNSEVRQVVDKLFSEHFERFLYENPQVARTVVEKGIMAARARVAAKKAR
EVTRRKSALDVASLPGKLADCSSKSPEECEIFLVEGDSAGGSTKSGRDSR
TQAILPLRGKILNVEKARLDRILNNNEIRQMITAFGTGIGGDFDLAKARY
HKIVIMTDADVDGAHIRTLLLTFFYRFMRPLIEAGYVYIAQPPLYKLTQG
KQKYYVYNDRELDKLKSELNPTPKWSIARYKGLGEMNADQLWETTMNPEH
RALLQVKLEDAIEADQTFEMLMGDVVENRRQFIEDNAVYANLDF
>SAV0484 holB, probable DNA polymerase III delta prime subunit
MDEQQQLTNAYHSNKLSHAYLFEGDDAQTMKQVAINFAKLILCQTDSQCE
TKVSTYNHPDFMYISTTENAIKKEQVEQLVRHMNQLPIESTNKVYIIEDF
EKLTVQGENSILKFLEEPPDNTIAILLSTKPEQILDTIHSRCQHVYFKPI
DKEKFINRLVEQNMSKPVAEMISTYTTQIDNAIALNEEFDLLALRKSVIR
WCELLLTNKPMALIGIIDLLKQAKNKKLQSLTIAAVNGFFEDIIHTKVNV
EDKQIYSDLKNDIDQYAQKLSFNQLILMFDQLTEAHKKLNQNVNPTLVFE
QIVIKGVS
>SAV1473 hu, DNA-binding protein II
MNKTDLINAVAEQADLTKKEAGSAVDAVFESIQNSLAKGEKVQLIGFGNF
EVRERAARKGRNPQTGKEIDIPASKVPAFKAGKALKDAVK
>SAV2028 int, similar to integrase
MASYEKRGNTWRYRISLGKDAETGKYKYISNSGFKRKSDAKHHAEMVERQ
LRNGDYIAPSTSTFKQVADDWISQYANEVKVSSVRAREKAIHHAIERFKN
KPIQTIKKHDYQRFVNDISIQYSKNYVDSIVTSTNMIFKYAYDMKLIRIL
PSEGIKRPKKKVSVEELEDTEIHKKFLEKDELFQFLEIAKNHHSPQNSFE
VFYTLAYTGMRAGELLALKWSDIDFENNTINITKTYYNPNNNKKQYQILT
PKTESSIGKISVDPHVIKLLKNYKVDVQDTWKNELYVDNNFVFTDVNGYP
LVIKKLQLWIKAILKKTNITNKQISTHSFRHTHCALLIEAGVHIKEIQER
LRHKDINTTMNIYAKITNSYKKDASQKFSKLMENVSKDLF
>SAV2002 int, integrase
MKTRCYDGKKWQYEFKHEGKRYRKKGFRTKREANSAGLDKLNELRSGFNI
DNYITLEEYFENWIKTYKQPVVKENTYRHYRNALQHIQKHKIGKMELSKI
NRQVYQKFINDYSKEHAKETIRKTNGAIRSALDDALYDGLIFKNPAYKVN
YKAGKPTKSEQEKFISVTEYEILKDHVRKKRTRSSLALFIMICTGCRVSG
ARNIKIEHINQVKNTIFIDERKTNTSPRYISIAKSDMKHIMDVISTFAIS
YDGYIFKEGGSIINLHAINNALKSACRVNNIPIITSHALRHTHCSYLLAK
GVSIHYISKRLGHKNIAITTSVYSHLLEEKFNEEDKKTTKILESM
>SAV0392 int, integrase homolog
MVKDPIKKAKNGTYYFRANLGYDSKGKKIQKYRSGFTTKKEAREEYSKLL
LMKPEELSENKDKMTFKHYIFEIFLPWYKTQVKLRTYENRLPTIKKHFSY
FDKMAVSDIEPIDVQNWQLKLSKKCKSSYVRAVQGLFSVAMDRAIVLGIT
TTNPSKIIGNVKKQKSKIEFWTKEEFEKVISLIYKEDYYQHFLFISLWFL
FMTGMRIGEATAIQWEDIDFDSGVLTINKTLYYKNQSNYRFVEPKTKASV
RHIVLDKCTLTYLSEWKEVQQNLIQTDFVMSYNGIPTQKHTLSYAIERYA
KLAGIHRIRIHGLRHSHASLLISMGENPLIIKDRLGHEDIETTLGTYGHL
YPNSNFEVANKLNGAISFKEAKQNYDTSPKNQFTVDYLRNKEMKKVQ
>SAV0847 int, integrase
MPVYKDDNTGKWYFSIRYKDVYGNNKRKMQRGFSTKREAKRAEAIFLNDV
NEGYSDSKTFDYVFHHYLENSDLRPKTKRRKQNEYHKHFKAKFGHIKMNK
ITQNQCQEFRKYLIENVASTNSARTIWSGFKVVINYAKKYFGLRTDPTIS
IKPIPRVKPKPKFMMREEFEERIKDIEEQDYRELFTLMFYTGLRIGEAMA
LVWTDYNKYKKEISINKTMDISNRTIYPRPKTDSSEDIVPLPKFINTMLT
ERHQREKELNKYFDERSYFIFGGMAPKHYSHVQKKFQKAFPHYNIHALRH
SYASYLANNGVDIFVLQSLMRHAQITETMGTYSHLYTQKKHDAIAIFDK
>SAV0503 mfd, transcription-repair coupling factor
MTILTTLIKEDNHFQDLNQVFGQANTLVTGLSPSAKVTMIAEKYAQSNQQ
LLLITNNLYQADKLETDLLQFIDAEELYKYPVQDIMTEEFSTQSPQLMSE
RIRTLTALAQGKKGLFIVPLNGLKKWLTPVEMWQNHQMTLRVGEDIDVDQ
FLNKLVNMGYKRESVVSHIGEFSLRGGIIDIFPLIGEPIRIELFDTEIDS
IRDFDVETQRSKDNIEEVDITTASDYIITEEVIRHLKEELKTAYENTRPK
IDKSVRNDLKETYESFKLFESTYFDHQILRRLVAFMYETPSTIIEYFQKD
AIIAVDEFNRIKETEESLTVESDSFISNIIESGNGFIGQSFIKYDDFETL
IEGYPVTYFSLFATTMPIKLNHIIKFSCKPVQQFYGQYDIMRSEFQRYVN
QNYHIVVLVETETKVERMQAMLSEMHIPSITKLHRSMSSGQAVIIEGSLS
EGFELPDMGLVVITERELFKSKQKKQRKRTKAISNAEKIKSYQDLNVGDY
IVHVHHGVGRYLGVETLEVGQTHRDYIKLQYKGTDQLFVPVDQMDQVQKY
VASEDKTPKLNKLGGSEWKKTKAKVQQSVEDIAEELIDLYKEREMAEGYQ
YGEDTAEQTTFELDFPYELTPDQAKSIDEIKDDMQKSRPMDRLLCGDVGY
GKTEVAVRAAFKAVMEGKQVAFLVPTTILAQQHYETLIERMQDFPVEIQL
MSRFRTPKEIKQTKEGLKTGFVDIVVGTHKLLSKDIQYKDLGLLIVDEEQ
RFGVRHKERIKTLKHNVDVLTLTATPIPRTLHMSMLGVRDLSVIETPPEN
RFPVQTYVLEQNMSFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQML
MPDANIAVAHGQMTERDLEETMLSFINNEYDILVTTTIIETGVDVPNANT
LIIEDADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLTETAEDRLQA
IKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDTVGFDLYSQMLEEA
VNEKRGIKEPESEVPEVEVDLNLDAYLPTEYIANEQAKIEIYKKLRKTET
FDQIIDIKDELIDRFNDYPVEVARLLDIVEIKVHALHSGITLIKDKGKII
DIHLSVKATENIDGEVLFKATQPLGRTMKVGVQNNAMTITLTKQNQWLDS
LKFLVKCIEESMRISDEA
>SAV1757 mrp, Mrp protein
MQNYRKVSNRNKADALKAITALKLQMDEELKTARTNADVDAVLKRFNVAL
SDIEAVITEKENSLLRIDNIAQQTYAKFKAIATPEQLAKVKVLIDQYVAD
GNRMIDEDATLNDIKQHTQFIVDEILAIKLPAEATKVSPKEIQPAPKVCT
PIKKEETHESRKVEKELPNTGSEGMDLPLKEFALITGAALLARRRTKNEK
ES
>SAV1297 mutL, DNA mismatch repair protein
MGKIKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEES
GVQSIRVVDNGSGIEAEDLGLVFHRHATSKLDQDEDLFHIRTLGFRGEAL
ASISSVAKVTLKTCTDNANGNEIYVENGEILNHKPAKAKKGTDILVESLF
YNTPARLKYIKSLYTELGKITDIVNRMAMSHPDIRIALISDGKTMLSTNG
SGRTNEVMAEIYGMKVARDLVHISGDTSDYHIEGFVAKPEHSRSNKHYIS
IFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHP
TKLEVRLSKEEQLYQLIVSKIQEAFKDRILIPKNNLDYVPKKNKVLYSFE
QQKIEFEQRQNTENNQEKTFSSEESNSKSFMAENQNDEIVIKEDSYNPFV
TKTSESLITDDESSGYNNTREKDEDYFKKQQEILQEMDQTFDSNEDASVQ
NYENKASDDYYDVNDIKGTKSKDPKRRIPYMEIVGQVHGTYIIAQNEFGM
YMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFSKDEQLVIDQY
KNELQQVGIMLEHFGGHDYIVSSYPVWFPKDEVEEIIKDMIELILEEKKV
DIKKLREDVAIMMSCKKSIKANHYLQKHEMSDLIDQLREAEDPFTCPHGR
PIIINFSKYELEKLFKRVM
>SAV1295 mutS, DNA mismatch repair protein
MSNVTPMMQQYLKIKSEYQDCLLFFRLGDFYEMFYEDAKEASRVLEITLT
KRDAKKENPIPMCGVPYHSADSYIDTLVNNGYKVAICEQMEDPKQTKGMV
RREVVRIVTPGTVMEQGGVDDKQNNYILSFVMNQPEIALSYCDVSTGELK
VTHFNDEATLLNEITTINPNEVVINDNISDNLKRQINMVTETITVRETLS
SEIYSVNQTEHKLMYQATQLLLDYIHHTQKRDLSHIEDVVQYAAIDYMKM
DFYAKRNLELTESIRLKSKKGTLLWLMDETKTPMGARRLKQWIDRPLISK
EQIEARLDIVDEFSAHFIERDTLRTYLNQVYDIERLVGRVSYGNVNARDL
IQLKHSISEIPNIKALLNSMNQNTLVQVNQLEPLDDLLDILEQSLVEEPP
ISVKDGGLFKVGFNTQLDEYLEASKNGKTWLAELQAKERQRTGIKSLKIS
FNKVFGYFIEITRANLQNFEPSEFGYMRKQTLSNAERFITDELKEKEDII
LGAEDKAIELEYQLFVQLREEVKKYTERLQQQAKIISELDCLQSFAEIAQ
KYNYTRPSFSENKTLELVESRHPVVERVMDYNDYVPNNCRLDNETFIYLI
TGPNMSGKSTYMRQVAIISIMAQMGAYVPCKEAVLPIFDQIFTRIGAADD
LVSGKSTFMVEMLEAQKALTYATEDSLIIFDEIGRGTSTYDGLALAQAMI
EYVAETSHAKTLFSTHYHELTTLDQALPSLKNVHVAANEYKGELIFLHKV
KDGAVDDSYGIQVAKLADLPEKVISRAQVILSEFEASAGKKSSISNLKMV
ENEPEINQENLNLSVEETTDTLSQKDFEQASFDLFENDQESEIELQIKNL
NLSNMTPIEALVKLSELQNQLK
>SAV1144 mutS2, MutS-like protein
MRQKTLDVLEFEKIKSLVANETISDLGLEKVNQMMPATNFETVVFQMEET
DEIAQIYNKHRLPSLSGLSKVSAFIHRADIGGVLNVSELNLIKRLIQVQN
QFKTFYNQLVEEDEGVKYPILDDKMNQLPVLTDLFHQINETCDTYDLYDN
ASYELQGIRSKISSTNQRIRQNLDRIVKSQANQKKLSDAIVTVRNERNVI
PVKAEYRQDFNGIVHDQSASGQTLYIEPSSVVEMNNQISRLRHDEAIEKE
RVLTQLTGYVAADKDALLVAEQVMGQLDFLIAKARYSRSIKGTKPIFKEE
RTVYLPKAYHPLLNRETVVANTIEFMEDIETVIITGPNTGGKTVTLKTLG
LIIVMAQSGLLIPTLDGSQLSVFKNVYCDIGDEQSIEQSLSTFSSHMTNI
VEILKHADKHSLVLFDELGAGTDPSEGAALAMSILDHVRKIGSLVMATTH
YPELKAYSYNREGVMNASVEFDVDTLSPTYKLLMGVPGRSNAFDISKKLG
LSLNIINKAKTMIGTDEKEINEMIESLERNYKRVETQRLELDRLVKEAEQ
VHDDLSKQYQQFQNYEKSLIEEAKEKANQKIKAATKEADDIIKDLRQLRE
QKGADVKEHELIDKKKRLDDHYEAKSIKQNVQKQKYDKIVAGDEVKVLSY
GQKGEVLEIVNDEEAIVQMGIIKMKLPIEDLEKKQKEKVKPTKMVTRQNR
QTIKTELDLRGYRYEDALIELDQYLDQAVLSNYEQVYIIHGKGTGALQKG
VQQHLKKHKSVSDFRGGMPSEGGFGVTVATLK
>SAV1452 nth, endonuclease-like protein
MVSKKKALEMIDVIANMFPDAECELKHDNPFELTIAVLLSAQCTDVLVNR
VTTELFKKYKTPEDYLAVSDEELMNDIRSIGLYRNKAKNIKKLCQSLIDQ
FNGEIPQTHKELESLAGVGRKTANVVMSVAFDEPSLAVDTHVERVSKRLG
INRWKDNVRQVEDRLCSVIPRDRWNRSHHQLIFFGRYHCLARKPKCDICP
LLEDCREGQKRYKASLKEA
>SAV0815 nuc, staphylococcal nuclease
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVV
VSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGD
TVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANK
IEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTH
EQLLRKSEAQAKKEKLNIWSEDNADSGQ
>SAV1324 nuc, thermonuclease
MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVH
VQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSK
KTLTNQDVYLEYDKEKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKYF
SPNGKYRNVFIEAQNKAKQQKLNIWSK
>SAV1355 parC, topoisomerase IV subunit A
MSEIIQDLSLEDVLGDRFGRYSKYIIQERALPDVRDGLKPVQRRILYAMY
SSGNTHDKNFRKSAKTVGDVIGQYHPHGDFSVYEAMVRLSQDWKLRHVLI
EMHGNNGSIDNDPPAAMRYTEAKLSLLAEELLRDINKETVSFIPNYDDTT
LEPMVLPSRFPNLLVNGSTGISAGYATDIPPHNLAEVIQATLKYIDNPDI
TVNQLMKYIKGPDFPTGGIIQGIDGIKKAYESGKGRIIVRSKVEEETLRN
GRKQLIITEIPYEVNKSSLVKRIDELRADKKVDGIVEVRDETDRTGLRIA
IELKKDVNSESIKNYLYKNSDLQISYNFNMVAISDGRPKLMGIRQIIDSY
LNHQIEVVANRTKFELDNAEKRMHIVEGLIKALSILDKVIELIRSSKNKR
DAKENLIEVFEFTEEQAEAIVMLQLYRLTNTDIVALEGEHKELEALIKQL
RHILDNHDALLNVIKEELNEIKKKFKSERLSLIEAEIEEIKIDKEVMVPS
EEVILSMTRHGYIKRTSIRSFNASGVEDIGLKDGDSLLKHQEVNTQDTVL
VFTNKGRYLFIPVHKLADIRWKELGQHVSQIVPIEEDEVVINVFNEKDFN
TDAFYVFATQNGMIKKSTVPLFKTTRFNKPLIATKVKENDDLISVMRFEK
DQLITVITNKGMSLTYNTSELSDTGLRAAGVKSINLKAEDFVVMTEGVSE
NDTILMATQRGSLKRISFKILQVAKRAQRGITLLKELKKNPHRIVAAHVV
TGEHSQYTLYSKSNEEHGLINDIHKSEQYTNGSFIVDTDDFGEVIDMYIS
>SAV1354 parE, topoisomerase IV subunit B
MAMNKQNNYSDDSIQVLEGLEAVRKRPGMYIGSTDKRGLHHLVYEIVDNS
VDEVLNGYGNEIDVTINKDGSISIEDNGRGMPTGIHKSGKPTVEVIFTVL
HAGGKFGQGGYKTSGGLHGVGASVVNALSEWLEVEIHRDGSIYHQSFKNG
GSPSSGLVKKGKTKKTGTKVTFKPDDTIFKASTSFNFDVLSERLQESAFL
LKNLKITLNDLRSGKERQEHYHYEEGIKEFVSYVNEGKEVLHDVATFSGE
ANGIEVDVAFQYNDQYSESILSFVNNVRTKDGGTHEVGFKTAMTRVFNDY
ARRINELKTKDKNLDGNDIREGLTAVVSVRIPEELLQFEGQTKSKLGTSE
ARSAVDSVVADKLPFYLEEKGQLSKSLVKKAIKAQQAREAARKAREDARS
GKKNKRKDTLLSGKLTPAQSKNTEKNELYLVEGDSAGGSAKLGRDRKFQA
ILPLRGKVINTEKARLEDIFKNEEINTIIHTIGAGVGTDFKIEDSNYNRV
IIMTDADTDGAHIQVLLLTFFFKYMKPLVQAGRVFIALPPLYKLEKGKGK
TKRVEYAWTDEELNKLQKELGKGFTLQRYKGLGEMNPEQLWETTMNPETR
TLIRVQVEDEVRSSKRVTTLMGDKVQPRREWIEKHVEFGMQEDQSILDNS
EVQVLENDQFDEEEI
>SAV1905 pcrA, ATP-depentend DNA helicase
MNALLNHMNTEQSEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLLDEKDV
SPYNVLAITFTNKAAREMKERVQKLVGDQAEVIWMSTFHSMCVRILRRDA
DRIGIERNFTIIDPTDQKSVIKDVLKNENIDSKKFEPRMFIGAISNLKNE
LKTPADAQKEATDYHSQMVATVYSGYQRQLSRNEALDFDDLIMTTINLFE
RVPEVLEYYQNKFQYIHVDEYQDTNKAQYTLVKLLASKFKNLCVVGDSDQ
SIYGWRGADIQNILSFEKDYPEANTIFLEQNYRSTKTILNAANEVIKNNS
ERKPKGLWTANTNGEKIHYYEAMTERDEAEFVIREIMKHQRNGKKYQDMA
ILYRTNAQSRVLEETFMKSNMPYTMVGGQKFYDRKEIKDLLSYLRIIANS
NDDISLQRIINVPKRGVGPSSVEKVQNYALQNNISMFDALGEADFIGLSK
KVTQECLNFYELIQSLIKEQEFLEIHEIVDEVLQKSGYREMLERENTLES
RSRLENIDEFMSVPKDYEENTPLEEQSLINFLTDLSLVADIDEADTENGV
TLMTMHSAKGLEFPIVFIMGMEESLFPHIRAIKSEDDHEMQEERRICYVA
ITRAEEVLYITHATSRMLFGRPQSNMPSRFLKEIPESLLENHSSGKRQTI
QPKAKPFAKRGFSQRTTSTKKQVSSSDWNVGDKVMHKAWGEGMVSNVNEK
NGSIELDIIFKSQGPKRLLAQFAPIEKKED
>SAV1690 polA, DNA polymerase I
MNKLVLIDGNSLSFRAFYALPLLSNKAGIHTNAVYGFAMLLEKILKEEKP
NHFLVAFDAGKTTFRHEKYSEYKGGRQKTPPELSEQFPYIRQLLDAYHIK
RYELDNYEADDIIGTLSKEADKAGFQTIIITGDRDLTQLATDNVTIYYTK
KGVTDVDHYTPDFIAEKYNGLTPNQIIDMKGLMGDTSDNIPGVAGVGEKT
AIKLLNQFDTVEGVYEHLDEISGKKLKEKLQNSKEDALMSKELATINVDS
PIEVKLEDTLMTHQDEQQEKIELFKKLEFKQLLSDIDQSASVEDAIEKTF
EIETSFDNIDFTSLKEAAIHFELDGGNYLRNNILKFSLFTGEKHIVINAD
DINNYAELVSWLENPNTKKVVYDAKKTYVASHRLGIDIQNISFDIMLASY
IIDPSRTISDVQSVVSLYGQSFVKDDVSIYGKGKKFKVPEDDVLNPYVAS
ITDAIYFAKPNMDKQLEEYNQVELLADLELPLAKILSEMEEIGIFTDVHD
LEEMEKEIQEKLDVLIRNIHDAAGEDFNINSPKQLGVVLFETLQLPVIKK
TKTGYSTAVDVLEQLQGEHPIIDYILEYRQLSKLQSTYVEGLQKVISDDQ
RIHTRFNQTLAQTGRLSSVDPNLQNIPVRLEEGRKIRKAFKPTSKDSVIL
SADYSQIELRVLAHITQDESMKEAFINGDDIHTATAMKVFGVEADQVDSL
MRRQAKAVNFGIVYGISDYGLSQSLGITRKKAKAFIDDYLASFPGVKQYM
SDIVKDAKALGYVETLLHRRRYIPDITSRNFNLRGFAERTAMNTPIQGSA
ADIIKLAMVKFAQKMKETTYQAKLLLQVHDELIFEVPKSEVDSFSEFVEE
IMENALQLDVPLKVDSSYGATWYDAK
>SAV1264 polC, DNA polymerase III alpha chain PolC-type
MAMTEQQKFKVLADQIKISNQLDAEILNSGELTRIDVSNKNRTWEFHITL
PQFLAHEDYLLFINAIEQEFKDIANVTCRFTVTNGTNQDEHAIKYFGHCI
DQTALSPKVKGQLKQKKLIMSGKVLKVMVSNDIERNHFDKACNGSLIKAF
RNCGFDIDKIIFETNDNDQEQNLASLEAHIQEEDEQSARLATEKLEKMKA
EKAKQQDNNESAVDKCQIGKPIQIENIKPIESIIEEEFKVAIEGVIFDIN
LKELKSGRHIVEIKVTDYTDSLVLKMFTRKNKDDLEHFKALSVGKWVRAQ
GRIEEDTFIRDLVMMMSDIEEIKKATKKDKAEEKRVEFHLHTAMSQMDGI
PNIGAYVKQAADWGHPAIAVTDHNVVQAFPDAHAAAEKHGIKMIYGMEGM
LVDDGVPIAYKPQDVVLKDATYVVFDVETTGLSNQYDKIIELAAVKVHNG
EIIDKFERFSNPHERLSETIINLTHITDDMLVDAPEIEEVLTEFKEWVGD
AIFVAHNASFDMGFIDTGYERLGFGPSTNGVIDTLELSRTINTEYGKHGL
NFLAKKYGVELTQHHRAIYDTEATAYIFIKMVQQMKELGVLNHNEINKKL
SNEDAYKRARPSHVTLIVQNQQGLKNLFKIVSASLVKYFYRTPRIPRSLL
DEYREGLLVGTACDEGELFTAVMQKDQSQVEKIAKYYDFIEIQPPALYQD
LIDRELIRDTETLHEIYQRLIHAGDTAGIPVIATGNAHYLFEHDGIARKI
LIASQPGNPLNRSTLPEAHFRTTDEMLNEFHFLGEEKAHEIVVKNTNELA
DRIERVVPIKDELYTPRMEGANEEIRELSYTNARKLYGEDLPQIVIDRLE
KELKSIIGNGFAVIYLISQRLVKKSLDDGYLVGSRGSVGSSFVATMTEIT
EVNPLPPHYICPNCKTSEFFNDGSVGSGFDLPDKTCETCGAPLIKEGQDI
PFETFLGFKGDKVPDIDLNFSGEYQPNAHNYTKVLFGEDKVFRAGTIGTV
AEKTAFGYVKGYLNDQGIHKRGAEIDRLVKGCTGVKRTTGQHPGGIIVVP
DYMDIYDFTPIQYPADDQNSAWMTTHFDFHSIHDNVLKLDILGHDDPTMI
RMLQDLSGIDPKTIPVDDKEVMQIFSTPESLGVTEDEILCKTGTFGVPEF
GTGFVRQMLEDTKPTTFSELVQISGLSHGTDVWLGNAQELIKTGICDLSS
VIGCRDDIMVYLMYAGLEPSMAFKIMESVRKGKGLTEEMIETMKENEVPD
WYLDSCLKIKYMFPKAHAAAYVLMAVRIAYFKVHHPLYYYASYFTIRASD
FDLITMIKDKTSIRNTVKDMYSRYMDLGKKEKDVLTVLEIMNEMAHRGYR
MQPISLEKSQAFEFIIEGDTLIPPFISVPGLGENVAKRIVEARDDGPFLS
KEDLNKKAGLSQKIIEYLDELGSLPNLPDKAQLSIFDM
>SAV1212 priA, primosomal protein
MIAKVIVDVASKSVDYKFDYIIPEQLESVIQPGVRVIVPFGPRTIQGYVM
EVTAEPDAQLDVSKLKKIIEVKDIQPELTSELIALSEWMGSTHVIKRISM
LEVMLPSAIKAKYKKAFKMKDDIELPSALLQKFDKHGYYYYKDAQKNNDI
QLLMKLLKDDIVEEKTILTQNITKKTKRAVRVIEGYHPDEVLAKLEKVIK
QYDLYAYLSEEQHKTIFLTDIEDMGFSKSSLDGLIKKGYVEKYDAVVERD
PFKDRVFEQESKQQLTEDQYKAYEAIKAKIVSQEQETFLLHGVTGSGKTE
VYLQTIEDVLSQGKQAMMLVPEIALTPQMVLRFKRRFGDDVAVLHSGLSN
GERYDEWQKIRDDRARVSVGARSSVFAPFKNLGLIIIDEEHESTYKQEDY
PRYHAREIAQWRSEYHHCPVILGSATPCLESYARAEKDVYHLLSLPNRVN
QQALPEIDIVDMREELSEGNRSMFSKDLREAIQLRLDRQEQVVLFLNRRG
YASFMLCRDCGYVPQCPNCDISLTYHKTTDLLKCHYCGYQETPPNQCPNC
ESEHIRQVGTGTQKVEELLQQEFEDARIIRMDVDTTSKKGAHEKLLTEFE
KGNGDILLGTQMIAKGLDYPNITLVGVLNADTMLNLPDFRASERTYQLLT
QVAGRAGRHEKAGQVIIQTYNPDHYSILDVQKNDYLTFYRQEMEYRKLGK
YPPYYYLINFTISHKEMKKVMEASQHVHKILLQHLTEKALVLGPSPAALA
RINNEFRFQILVKYKSEPGLLQAIQFLDDYYHEKFIKEKLALKIDIDPQM
MM
>SAV1285 recA, RecA protein
MDNDRQKALDTVIKNMEKSFGKGAVMKLGDNIGRRVSTTSTGSVTLDNAL
GVGGYPKGRIIEIYGPESSGKTTVALHAIAEVQSNGGVAAFIDAEHALDP
EYAQALGVDIDNLYLSQPDHGEQGLEIAEAFVRSGAVDIVVVDSVAALTP
KAEIEGEMGDTHVGLQARLMSQALRKLSGAISKSNTTAIFINQIREKVGV
MFGNPETTPGGRALKFYSSVRLEVRRAEQLKQGQEIVGNRTKIKVVKNKV
APPFRVAEVDIMYGQGISKEGELIDLGVENDIVDKSGAWYSYNGERMGQG
KENVKMYLKENPQIKEEIDRKLREKLGISDGDVEETEDAPKSLFDEE
>SAV0004 recF, DNA repair and genetic recombination protein
MKLNTLQLENYRNYDEVTLKCHPDVNILIGENAQGKTNLLESIYTLALAK
SHRTSNDKELIRFNADYAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLE
QSRLTQYIGHLNVVLFAPEDLNIVKGSPQIRRRFIDMELGQISAVYLNDL
AQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFI
QELESLAKPIHAGITNDKEALSLNYLPSLKFDYAQNEAARLEEIMSILSD
NMQREKERGISLFGPHRDDISFDVNGMDAQTYGSQGQQRTTALSIKLAEI
ELMNIEVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQTFVTTTSVDGI
DHEIMNNAKLYRINQGEIIK
>SAV1227 recG, ATP-dependent DNA helicase
MAKVNLIESPYSLLQLKGIGPKKIEVLQQLNIHTVEDLVLYLPTRYEDNT
VIDLNQAEDQSNVTIEGQVYTAPVVAFFGRNKSKLTVHLMVNNIAVKCIF
FNQPYLKKKIELNQTITVKGKWNRVKQEITGNRVFFNSQGTQTQENADVQ
LEPVYRIKEGIKQKQIRDQIRQALNDVTIHEWLTDELREKYKLETLDFTL
NTLHHPKSKEDLLRARRTYAFTELFLFELRMQWLNRLEKSSDEAIEIDYD
LDQVKSFIDRLPFELTEAQKSSVNEIFRDLKAPIRMHRLLQGDVGSGKTV
VAAICMYALKTAGYQSALMVPTEILAEQHAESLMALFGDSMNVALLTGSV
KGKKRKILLEQLENGTIDCLIGTHALIQDDVIFHNVGLVITDEQHRFGVN
QRQLLREKGAMTNVLFMTATPIPRTLAISVFGEMDVSSIKQLPKGRKPII
TTWAKHEQYDKVLMQMTSELKKGRQAYVICPLIESSEHLEDVQNVVALYE
SLQQYYGVSRVGLLHGKLSADEKDEVMQKFSNHEIDVLVSTTVVEVGVNV
PNATFMMIYDADRFGLSTLHQLRGRVGRSDQQSYCVLIASPKTETGIERM
TIMTQTTDGFELSERDLEMRGPGDFFGVKQSGLPDFLVANLVEDYRMLEV
ARDEAAELIQSGVFFENTYQHLRHFVEENLLHRSFD
>SAV1519 recN, DNA repair protein
MLQTLSIKQFAIIEELEIQFSDGLTVLSGETGSGKSIIIDAIGQLIGMRA
SSDFVRHGEKKAVIEGIFDIDESKDAIHILKNMDIDVDEDFLLVKREIFS
SGKSLCKINNQTVTLQDLRKVMQELLDIHGQHETQSLLKQKYHLTLLDNY
AESRYQDLLDKYHQTFQNYKAKKQELEDLESADQALLQRLDLMKFQLEEL
SEAHLKEGEIEQLEIDIKRIQNSEKLSLALNNAHMTLTDENAITDRLYEL
SNHLLTINDIVPNKYDKLKEDIDQFYYILEDAKHELYDEMANTEFDEQVL
NEYESRMNLLNNLKRKYGKDISELIAYQEKLNNEINKIENYEQSTSQLRE
EINALYNQVIEVGQALSKQRRIVARELRDHIVSEIQNLQMKDANLEISFK
KLEEPNIDGIEFVEFLISPNKGEPLKSLNKIASGGELSRIMLALKSIFVK
SRGQTAILFDEVDSGVSGQAAQKMAEKMRDIAEYIQVICISHLPQVASMS
DHHLLISKSSKDDRTTTQVQELIGDDKVDEIARMISGASVTDLTRENARE
MIQHNQRRR
>SAV0721 recQ, probable DNA helicase
MMQQTLSHYFGYETFRPGQEEIISKVLDHRNVLGVLPTGGGKSICYQVPG
LLLGGTTIVISPLISLMKDQVDQLKAMGIQAAFLNSSLTQKEQQRIEKAL
SNGEIQFLYVAPERFENRYFLNMLQRIKIHLVAFDEAHCISKWGHDFRPS
YQNVISKVFTLPQDFTIIALTATATVEVQQDIREKLNIAQTDQIKTSTKR
RNLIFKVNPTYQRQKFILDYIKTHDEDAGIIYCSTRKQVEELQEALESQK
IESVIYHAGLSNKEREEAQNDFLFDRVKVVVATNAFGMGIDKSNVRFVIH
YNMPGDLESYYQEAGRAGRDGLKSECILLFSERDINLHEYFITVSQADDD
YKDKMGEKLTKMIQYTKTKKCLEATIVHYFEPNEKLEECEQCSNCVQQDK
SYNMTQEAKMIISCIARMKQQESYSVIIQVLRGESTDYIKYKGYDQISTH
GLMKGYTTSELSHLIDELRFKGFLNENDEILMCDTSIKKLLSNEVEVFTT
PFKQKATEKVFINTVEGVDRVLFSQLVEVRKKLSDKLTIAPVSIFSDYTL
EEFAKRKPASKQDMINIDGVGSYKLKHYCPAFLETIQNYKAKV
>SAV0480 recR, recombination protein
MHYPEPISKLIDSFMKLPGIGPKTAQRLAFHTLDMKEDDVVQFAKALVDV
KRELTYCSVCGHITENDPCYICEDKQRDRSVICVVEDDKDVIAMEKMREY
KGLYHVLHGSISPMDGIGPEDINIPSLIERLKSDEVSELILAMNPNLEGE
STAMYISRLVKPIGIKVTRLAQGLSVGGDLEYADEVTLSKAITGRTEM
>gid:876327  res  putative resolvase
MANIGYARVSTRDQSLDLQIDALSNFGCEKIFSEKVSGRKVNRTELDKCL
DYLREGDTLVIYKLDRLGRTTKQLIDLAQWLENNNIELQIIDMNINTKDP
MGKMFFTMMSAFAELEANLLSERTKKGLESARARGNMGGRKAMPQEKKEY
IKHLYDTKEYTGQEIAKKTNVSRDTVYRILREFKK
>SAV1244 rnhB, RNase HII
MTLTIKEVTQLINAVNTIEELENHECFLDERKGVQNAIARRRKALEKEQA
LKEKYVEMTYFENEILKEHPNAIICGIDEVGRGPLAGPVVACATILNSNH
NYLGLDDSKKVPITKRLELNEALKNEVTAFAYGIATAEEIDEFNIYKATQ
IAMQRAIDGLSVQPTHLLIDAMTLDNALPQVSLIKGDARSVSIAAASIMA
KVFRDDYMTQLSKDYPEYGFEKNAGYGTKQHLLAIDDIGIMKEHRKSFEP
IKSLL
>SAV1642 ruvA, holliday junction DNA helicase
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKHLDHEVLIRTSL
IVREDAQLLYGFSSEEEKDMFLSLIKVTGIGPKSALAILATSTPNEVKRA
IENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTV
QDQFVQEAMLALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS
>SAV1641 ruvB, holliday junction DNA helicase
MNERMVDQSMHSEETDFELSLRPTRLRQYIGQNSIKSNLEVFIKAAKLRH
EPLDHVLLFGPPGLGKTTLSNIIANEMEVNIRTVSGPSLERPGDLAAILS
GLQPGDVLFIDEIHRLSSVVEEVLYPAMEDFFLDIIIGKGDEARSIRIDL
PPFTLVGATTRAGSLTGPLRDRFGVHLRLEYYNESDLKEIIIRTAEVLGT
GIDEESAIELAKRSRGTPRVANRLLKRVRDFQQVNEDEQIYIETTKHALG
LLQVDQHGLDYIDHKMMNCIIKQYNGGPVGLDTIAVTIGEERITIEDVYE
PFLIQKGFLERTPRGRKATPLAYEHFAKSNEERG
>SAV0428 set13, exotoxin 13
MKLTALAKATLALGILTTGVFTAESKAVHAKVELDETQRKYYINMLHQYY
SEESFESTNISVKSEDYYGSNVLNFNQRNKTFKVFLLGDDKNKYKEKTHG
LDVFAVPELIDIKGGIYSVGGITKKNVRSVFGFVSNPSLQVKKVDAKHGF
SINELFFIQKEEVSLKELDFKIRKMLVEKYRLYKGASDKGRIVINMKDEK
KYVIDLSEKLSFDRMFDVMDSKQIKNIEVNLN
>SAV0366 ssb, single-strand DNA-binding protein of phage phi PVL
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFIN
CVVFRRQADNVNNYLSKGSLAGVDGRLQSRNYENQEGRRVFVTEVVCDSV
QFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNP
FANANGPIDISDDDLPF
>SAV1664 tag, DNA-3-methyladenine glycosidase
MNECAFGTKDPVYLNYHDHVWGQPLYDSKALFKLLALESQHAGLSWLTIL
KKKEAYEEAFYDFEPEKVAQMTAQDIDRLMTFPNIVHHRKKLEAIVNQAQ
GYLKIEQAYGSFSKFLWSYVNCKPKDLQYEHASDRITVDDNATQLSKDLK
QYGFKFLGPVTVFSFLEAAGLYDAHLKDCPSKPKHN
>SAV0415 tnp, transposase
MNDFTTEILKTLANKGDLNELFRVHLEKAVNTLLKTELTAFLDYEKYDRI
GFNTGNSRNGSYDRTVKTEYGELHLQIPRDRNGEFKQQTVPAYRRTNDTL
EETVIHLFRKGITMSEIADLIEKMYGHYYTPQTMSNITKSFTEEVTAFNG
RELHDRYAAIYMDATYIPLKRKTVAKEAIHIAVGIRPDGSKEVLSYAIAP
TESITIWEEILLDLQERGLKNVLLFITDGLKGMVGAISRFYPKARFQHCC
VHVSRNISHKVRVDDRKEVCDDFKMVYQASSKEVALEARGTFAEKWKTSY
PKVVESILSNDHLLTFYDFPLAIRKSIYSTNLIESFNKQIKKYSHRKEQF
QNEESMERFLVSSFDTYNQKFLGRSHKGFQQAEGELEQMLSQLIEN
>SAV1162 tnp, transposase for insertion sequence IS1181
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV0027 tnp, transposase for IS-like element
MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRW
VQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTL
DIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFK
LKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALY
KKNRRSLQIYGFSPCHEISIMLAS
>SAV0036 tnp, transposase for IS-like element
MNYFRYKQFNKDVITVAVGYYLRYTLSYRDISEILRERGVNVHHSTVYRW
VQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTL
DIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFK
LKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALY
KKNRRSLQIYGFSPCHEISIMLAS
>SAV2379 tnp, transposase
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV0067 tnp, transposase
MVPTVVIDLVDQLKGNYSIKLILEVLNIPKSTYYRWKNKTYKNDTVTQKV
IELCEANHYTYGYRKITALINQCYTSPINHKRVQRMMQKHHLNCRVRPKK
TTRIGKPYYKTDNLLQR
>SAV0630 tnp, transposase for IS1181
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV1699 tnp, transposase
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV1806 tnp, transposase homolog for IS232
MKLSLDINTDFEVTTLTDLPKLKIVMENLNMKINKSEIARHMGVYRRTVD
KYLNGFEPTKKRNRQSIIDKYYPIIEKLLSDSSEQKFYYKLILWQYLKDK
HGLTCAYSTFRAYILKHDEFNRYFMKGYQRLSPKGKTRFETKASHQAQFD
WKEGINFKTKDNQMVL
>SAV1860 tnp, transposase
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV2501 tnp, transposase
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV0384 tnp, transposase for IS1181
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV1720 tnp, transposase
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV2080 tnp, transposase
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV0066 tnp, transposase
MAYKIDDKQDQRLVNDTLNQIDIPEGYILHSDQGSVYTSYAYYQLCEEKG
IIRSMSRKGTPADNAPIESFHSSLKSETLYINNQLNSSNHIVIDIVEKYI
KNYNNNQIQQKLGYLSPVKYRELIA
>SAV0926 tnp, transposase for IS1181
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCG
VKNEGQIHKHGKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTS
IVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANS
LRIKPFNCLPEHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTR
FLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAAIIFDRFHIVQ
HLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLN
SVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>SAV0056 tnpA, transposase A
MKVQRIEVENKPYPLYLLLDKEYQLIEPVMKFIKYLDNTGKSPNTIKAYC
YHLKLLYEFMEQRGVILNDINFELLADFVGWLRYPSASNVIDLQSKKAIR
EETTVNTILNVVMSFLDYLSRLGEFKSIDVFKQAKGRNFKGFLHHVNKGR
YQKNVLKLRVKKKQIRTLRSKEVKQIIDACHTKRDKLILMLMYEGGLRIG
EVLSLRLEDIVTWDNQIHLTPRDVNVNEAYIKLRKERTIHVSKELMSLYT
DYLIYEYSEELEHDYVFISLKEGYFGKPLKYQSVLDLVRRIVKRTGIEFT
SHMLRHTHATQLIREGWDVAFVQKRLGHAHVQTTLNTYVHLSDQDMKNEF
NKYLERKEHKK
>SAV1659 tnpA, transposase A
MKVQRIEVENKPYPLYLLLDKEYQLIEPVMKFIKYLDNTGKSPNTIKAYC
YHLKLLYEFMEQRGVILNDINFELLADFVGWLRYPSASNVIDLQSKKAIR
EETTVNTILNVVMSFLDYLSRLGEFKSIDVFKQAKGRNFKGFLHHVNKGR
YQKNVLKLRVKKKQIRTLRSKEVKQIIDACHTKRDKLILMLMYEGGLRIG
EVLSLRLEDIVTWDNQIHLTPRDVNVNEAYIKLRKERTIHVSKELMSLYT
DYLIYEYSEELEHDYVFISLKEGYFGKPLKYQSVLDLVRRIVKRTGIEFT
SHMLRHTHATQLIREGWDVAFVQKRLGHAHVQTTLNTYVHLSDQDMKNEF
NKYLERKEHKK
>SAV0055 tnpB, transposase B
MNASSKRKIISQSEISKKIAVMNEEMQGFWANNSWDIRKCPHPSAIELSK
NPALRNRWVRFERVKNLWLRTELKYFYFYHLNNGIWNAKTVWIRKGTVIN
KMLDFLDLKYPSITSITEVPIEKAMTEYRTYLTKRGVRITTTNYKITANQ
EKTPVKANSYYVTNLKQFMEFYENFYFDGEEWDKDVWDRRNLPLPDDKVN
PTQYEYTINFKGFRNTYFKQLVKRYCKLRLNVDSFSYVSDIAQRLKEFFN
FLDMKFKQVQRVHQLTRVEIEAYLSELNMMGIKPSTITGRISILEGLFST
LLRLEWDDVPSKILIYSEDYPKIPRAKPRFIDEFVLEQLNSHLDKLPEYI
ATMTMIVQECGMRISELCTLKKGCLLEDKDGDFFLKYYQWKMKKEHIVPI
SKEVALLIKVREDKVSEEFPDSEYLFPRKDGSPLKQETFRGELNKLAYEQ
NIVDKSGEIYRFHAHAFRHTVGTRMINNGMPQHIVQKFLGHESPEMTSRY
AHIFDETLKNEFTKFQEKLVTNNGDVLDLDEDNEVDDVELQWFKKNINAQ
VLPNGYCRLPVVAGGCPHANACLDCTHFCTSKQFLPQHEEQLERTEELLA
IAKDKQWQRQVETNSRVKERLEQIIGSLTG
>SAV1658 tnpB, transposase B
MNASSKRKIISQSEISKKIAVMNEEMQGFWANNSWDIRKCPHPSAIELSK
NPALRNRWVRFERVKNLWLRTELKYFYFYHLNNGIWNAKTVWIRKGTVIN
KMLDFLDLKYPSITSITEVPIEKAMTEYRTYLTKRGVRITTTNYKITANQ
EKTPVKANSYYVTNLKQFMEFYENFYFDGEEWDKDVWDRRNLPLPDDKVN
PTQYEYTINFKGFRNTYFKQLVKRYCKLRLNVDSFSYVSDIAQRLKEFFN
FLDMKFKQVQRVHQLTRVEIEAYLSELNMMGIKPSTITGRISILEGLFST
LLRLEWDDVPSKILIYSEDYPKIPRAKPRFIDEFVLEQLNSHLDKLPEYI
ATMTMIVQECGMRISELCTLKKGCLLEDKDGDFFLKYYQWKMKKEHIVPI
SKEVALLIKVREDKVSEEFPDSEYLFPRKDGSPLKQETFRGELNKLAYEQ
NIVDKSGEIYRFHAHAFRHTVGTRMINNGMPQHIVQKFLGHESPEMTSRY
AHIFDETLKNEFTKFQEKLVTNNGDVLDLDEDNEVDDVELQWFKKNINAQ
VLPNGYCRLPVVAGGCPHANACLDCTHFCTSKQFLPQHEEQLERTEELLA
IAKDKQWQRQVETNSRVKERLEQIIGSLTG
>gid:876324  tnpE  probable transposase
MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRW
VQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTL
DIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAIAKVIKAFK
LKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALY
KKNRRSLQIYGFSPCHEIRDMLAS
>gid:876339  tnpE  probable transposase
MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRW
VQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTL
DIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAIAKVIKAFK
LKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALY
KKNRRSLQIYGFSPCHEIRDMLAS
>gid:876334  tnpF  probable transposase
MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRW
VQEYAPVLYQIWKKKHKKAYYKWRVDETYIKIKGQWCYLYRAIDADGHTL
DIWLRKKRDHQSAYAFIKRLIKQFGKPQMIITDQAPSTKVAMAKIIKVFK
LKPNCHCTSKYLNNFIEQDHRHIKVRKTRYQSVNTAKNTLKGIECIYGLY
KKTVGLFRSTDFHHATKLVIC
>gid:876333  tnpG  probable transposase
MNYFRYKQFNKDVITVAVGYYLRYALSYRDISEILRERGVNVHHSTVYRW
VQEYAPVLYQIWKKKHKKAYYKWRVDETYIKIKGQWCYLYRAIDADGHTL
DIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFK
LKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALY
KKNRRSLQIYGFSPCHEISIMLAS
>SAV2254 topB, DNA topoisomerase III topB
MKSLILAEKPSVARDIADALQINQKRNGYFENNQYIVTWALGHLVTNATP
EQYDKNLKEWRLEDLPIIPKYMKTVVIGKTSKQFKTVKALILDNKVKDII
IATDAGREGELVARLILDKVGNKKPIRRLWISSVTKKAIQQGFKNLKDGR
QYNDLYYAALARSEADWIVGINATRALTTKYDAQLSLGRVQTPTIQLVNT
RQQEINQFKPQQYFTLSLTVKGFDFQLESNQRYTNKETLEQMVNNLKNVD
GKIKSVATKHKKSYPQSLYNLTDLQQDMYRRYKIGPKETLNTLQSLYERH
KVVTYPRTDSNYLTTDMVDTMKERIQATMATTYKDQARPLMSKTFSSKMS
IFNNQKVSDHHAIIPTEVRPVMSDLSNRELKLYDMIVERFLEALMPPHEY
DAITVTLEVAGHTFVLKENVTTVLGFKSIRQGESITEMQQPFSEGDEVKI
SKTNIREHETTPPEYFNEGSLLKAMENPQNFIQLKDKKYAQTLKQTGGIG
TVATRADIIDKLFNMNAIESRDGKIKVTSKGKQILELAPEELTSPLLTAQ
WEEKLLLIERGKYQAKTFINEMKDFTKDVVNGIKNSDRKYKHDNLTTTEC
PTCGKFMIKVKTKNGQMLVCQDPSCKTKKNVQRKTNARCPNCKKKLTLFG
KGKEAVYRCVCGHSETQAHMDQRMKSKSSGKVSRKEMKKYMNKNEGLDNN
PFKDALKNLNL
>SAV0057 truncated-radC, truncated hypothetical protein
MKEINIVSLQMIKTDTLSYLKNRISNPEDAAEIMRSFIGNSDREHLILIC
MNSKNEPTHIQTLSIGSINQTVIHPREIFKTAILSNANSIMLGHNHPSGD
VLTIV
>SAV1660 truncated-radC, DNA repair protein RadC homolog
MKIKEMVTSEMPRERLLSHGAKSLSNTELLAILINTGRKGFSSIDISNEL
LKSASNLNELKKSSINDLIKVKGIGLQKAITLKAAFELGERMGRRAENNR
IKITQPSDVADYMIPTMKDLTQEHFVILLLNSKNVVIKETCVFKGTLNSS
IVHPREIFSIAVRENANAIIAVHNHPSGDVLTIV
>SAV0029 truncated-repB, truncated replication protein for pUB110 plasmid
MGVSFNIMCPNSSIYSDEKSRVLVDKTKSGKVRPWREKKIANVDYFELLH
ILEFKKAERVKDCAEILEYKQNRETGERKLYRVWFCKSRLCPMCNWRRAM
KHGIQSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSDMAQGFR
RMMQYKKINKNLVGFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTEN
YVNQKQWIQFWKKAMKLDYDPNVKVQMIRPKNKYKSDIQSAIDETAKYPV
KDTDFMTDDEEKNL
>SAV0028 truncated-repB, truncated replication protein for plasmid
MSDLEEGLHRKRLISYGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDG
FSIIAMWNWERKNYFIKE
>gid:876340  truncated-res  truncated resolvase
MAKIGYARVSTQDQSLDGQIDTLEEYGCERIFSEKASGRKTKRTELDKCL
DYLREGDILVVYKLDRLGRTTKQLIELSQWLDENSIDLHIIDMNVSTKDA
MGKMFFTVLLQS
>gid:876322  truncated-res  truncated resolvase Res
MMSAFAELEANLLSERTKKGLEAARARGRKGGRPSLPDHKKREIKFLYDE
QKLSGEEIAEQTGVSRSTVYRIIKESRKI
>SAV1195 truncated-tnp, truncated transposase
MLSFTRMSVRGINKVKRELGFVLMALNIRKIAAQRAVHYKIHIKKADFYQ
IINRNQLFTLPKNLMSQPPS
>gid:876335  truncated-tnp  truncated transposase
MFKFTDINLAREAKNRLIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNS
HNRLKSTNLIERLNQEVRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIY
SSRKYINFDK
>gid:876338  truncated-tnp  truncated transposase
MIHDYIDQPKYSKACASLDDGFEDAFQYTVQGNSHNRLKSTNLIERLNQE
VRRREKIIRIFPNQTSANRLIGAVLMDLHDEWIYSSRKYINFDK
>SAV0581 ung, uracil-DNA glycosylase
MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFEN
IKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQ
TPHLQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKE
HVVFILWGKPAQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKAN
AYLESVGKSPINWCESEA
>SAV0759 uvrA, exinuclease ABC subunit A
MKEPSIVVKGARAHNLKDIDIELPKNKLIVMTGLSGSGKSSLAFDTIYAE
GQRRYVESLSAYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSKNPRSTV
ATVTEIYDYIRLLYARVGKPYCPNHNIEIESQTVQQMVDRIMELEARTKI
QLLAPVIAHRKGSHEKLIEDIGKKGYVRLRIDGEIVDVNDVPTLDKNKNH
TIEVVVDRLVVKDGIETRLADSIETALELSEGQLTVDVIDGEDLKFSESH
ACPICGFSIGELEPRMFSFNSPFGACPTCDGLGQKLTVDVDLVVPDKDKT
LNEGAIEPWIPTSSDFYPTLLKRVCEVYKINMDKPFKKLTERQRDILLYG
SGDKEIEFTFTQRQGGTRKRTMVFEGVVPNISRRFHESPSEYTREMMSKY
MTELPCETCHGKRLSREALSVYVGGLNIGEVVEYSISQALNYYKNIDLSE
QDQAIANQILKEIISRLTFLNNVGLEYLTLNRASGTLSGGEAQRIRLATQ
IGSRLTGVLYVLDEPSIGLHQRDNDRLINTLKEMRDLGNTLIVVEHDDDT
MRAADYLVDIGPGAGEHGGQIVSSGTPQKVMKDKKSLTGQYLSGKKRIDV
PEYRRPASDRKISIRGARSNNLKGIDVDIPLSIMTVVTGVSGSGKSSLVN
EVLYKSLAQKINKSKVKPGLYDKIEGIDQLDKIIDIDQSPIGRTPRSNPA
TYTGVFDDIRDVFAQTNEAKIRGYQKGRFSFNVKGGRCEACKGDGIIKIE
MHFLPDVYVPCEVCDGKRYNRETLEVTYKGKNIADILEMTVEEATQFFEN
IPKIKRKLQTLVDVGLGYVTLGQQATTLSGGEAQRVKLASELHKRSTGKS
IYILDELTTGLHVDDISRLLKVLNRLVENGDTVVIIEHNLDVIKTADYII
DLGPEGGSGGGTIVATGTPEDIAQTKSSYTGKYLKEVLERDKQNTEDK
>SAV0758 uvrB, exinuclease ABC subunit B
MTMVEHYPFKIHSDFEPQGDQPQAIKEIVDGIKAGKRHQTLLGATGTGKT
FTMSNVIKEVGKPTLIIAHNKTLAGQLYSEFKEFFPENRVEYFVSYYDYY
QPEAYVPSTDTFIEKDASINDEIDQLRHSATSALFERDDVIIIASVSCIY
GLGNPEEYKDLVVSVRVGMEMDRSELLRKLVDVQYTRNDIDFQRGTFRVR
GDVVEIFPASKEELCIRVEFFGDEIDRIREVNYLTGEVLKEREHFAIFPA
SHFVTREEKLKVAIERIEKELEERLKELRDENKLLEAQRLEQRTNYDLEM
MREMGFCSGIENYSVHLTLRPLGSTPYTLLDYFGDDWLVMIDESHVTLPQ
VRGMYNGDRARKQVLVDHGFRLPSALDNRPLKFEEFEEKTKQLVYVSATP
GPYEIEHTDKMVEQIIRPTGLLDPKIEVRPTENQIDDLLSEIQTRVERNE
RVLVTTLTKKMSEDLTTYMKEAGIKVNYLHSEIKTLERIEIIRDLRMGTY
DVIVGINLLREGIDIPEVSLVVILDADKEGFLRSNRSLIQTIGRAARNDK
GEVIMYADKMTDSMKYAIDETQRRREIQMKHNEKHGITPKTINKKIHDLI
SATVENDENNDKAQTVIPKKMTKKERQKTIDNIEKEMKQAAKDLDFEKAT
ELRDMLFELKAEG
>SAV1146 uvrC, excinuclease ABC subunit C
MEDYKQRIKNKLNVVPMEPGCYLMKDRNDQVIYVGKAKKLRNRLRSYFTG
AHDAKTTRLVGEIRRFEFIVTSSETESLLLELNLIKQYQPRYNILLKDDK
SYPFIKITKEKYPRLLVTRTVKQGTGKYFGPYPNAYSAQETKKLLDRIYP
YRKCDKMPDKLCLYYHIGQCLGPCVYDVDLSKYAQMTKEITDFLNGEDKT
ILKSLEERMLTASESLDFERAKEYRDLIQHIQNLTNKQKIMSSDKTIRDV
FGYCVDKGWMCIQVFFIRQGNMIKRDTTMIPLQQTEEEEFYTFIGQFYSL
NQHILPKEVHVPRNLDKEMIQSVVDTKIVQPARGPKKDMVDLAAHNAKVS
LNNKFELISRDESRTIKAIEELGTQMGIQTPIRIEAFDNSNIQGVDPVSA
MVTFVDGKPDKKNYRKYKIKTVKGPDDYKSMREVVRRRYSRVLNEGLPLP
DLIIVDGGKGHMNGVIDVLQNELGLDIPVAGLQKNDKHQTSELLYGASAE
IVPLKKNSQAFYLLHRIQDEVHRFAITFHRQTRQKTGLKSILDDIDGIGN
KRKTLLLRSFGSIKKMKEATLEDFKNIGIPENVAKNLHEQLHK
>SAV1252 xerC, site-specific recombinase XerC homologue
MNHIQEAFLNTLKVERNFSEHTLKSYQDDLIQFNQFLEQEHLQLKTFEYR
DARNYLSYLYSNHLKRTSVSRKISTLRTFYEYWMTLDENIINPFVQLVHP
KKEKYLPQFFYEEEMEALFKTVEEDTSKNLRDRVILELLYATGIRVSELV
NIKKQDIDFYANGVTVLGKGSKERFVPFGAYCRQSIENYLEHFKPIQSCN
HDFLILNMKGEAITERGVRYVLNDIVKRTAGVSEIHPHKLRHTFATHLLN
QGADLRTVQSLLGHVNLSTTGKYTHVSNQQLRKVYLNAHPRAKKENET
>SAV1497 xerD, site-specific recombinase
METIIEEYLRFIQIEKGLSSNTIGAYRRDLKKYQDYMTEHHISHIDFIDR
QLIQECLGHLIDQGQSAKSIARFISTIRSFHQFAIREKYAAKDPTVLLDS
PKYDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSEL
IHLELENVNLIMGFVRVFGKGDKERIVPLGDAVIEYLTTYIETIRPQLLK
KTVTEVLFLNMHGKPLSRQAIWKMIKQNGVKANIKKTLTPHTLRHSFATH
LLENGADLRAVQEMLGHSDISTTQLYTHVSKSQIRKMYNQFHPRA