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2024-05-08 10:40:06

Gene list

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COG category: Replication, recombination and repair
Organism: Chlamydophila pneumoniae J138, J138

Number of genes found: 73

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Chlamydophila pneumoniae J138, J138
NameLocus tagProduct / DescriptionUniProt / TrEMBL protein nameGenomic elementTypeBeginLengthStrandGC-content
CPj0007 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS7515 2655 + 0.403013
CPj0009 hypothetical proteinSubName: Full=HB3 protein; SubName: Full=Uncharacterized protein; chromosome CDS11485 1308 + 0.41208
CPj0010 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS13104 2325 + 0.446452
CPj0041 hypothetical proteinSubName: Full=HB2 protein; SubName: Full=Uncharacterized protein; chromosome CDS55667 1350 + 0.432593
CPj0043 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS58118 1929 + 0.432348
CPj0095 S/T protein kinaseRecName: Full=Serine/threonine-protein kinase PknD; EC=2.7.11.1; chromosome CDS115708 2757 + 0.406239
CPj0126 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS158520 2280 + 0.397807
CPj0339 RecF-ABC superfamily ATPaseRecName: Full=DNA replication and repair protein RecF; chromosome CDS383036 624 + 0.419872
CPj0340 frame-shift with CPj0339SubName: Full=Frame-shift with CPj0339; chromosome CDS383476 645 + 0.421705
CPj0350 CT066 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS392889 507 + 0.398422
CPj0383 CT047 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS430455 948 - 0.425105
CPj0473 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS547386 1527 - 0.464309
CPj0505 3-methyladenine DNA glycosylaseRecName: Full=Putative 3-methyladenine DNA glycosylase; EC=3.2.2.-; chromosome CDS587839 591 + 0.460237
CPj0589 CT470 hypothetical proteinRecName: Full=DNA repair protein RecO; AltName: Full=Recombination protein O; chromosome CDS677961 759 + 0.413702
CPj0673 CT552 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS754609 180 + 0.377778
CPj0703 S/T protein kinaseSubName: Full=S/T Protein Kinase; SubName: Full=S/T protein kinase; SubName: Full=Serine/threonine protein kinase; SubName: Full=Serine/threonine-protein kinase; chromosome CDS789003 1509 - 0.402253
CPj0706 CT670 hypothetical proteinSubName: Full=Putative uncharacterized protein CPn0706 Homolog; SubName: Full=Uncharacterized protein; chromosome CDS792498 507 - 0.392505
CPj0835 SWI/SNF family helicase_1SubName: Full=SWI/SNF family helicase_1; chromosome CDS941363 3648 - 0.408443
CPj0849 SWI/SNF family helicase_2SubName: Full=SWI/SNF family helicase_2; chromosome CDS961109 3501 + 0.406455
CPj0917 hydrolase/phosphatase homologSubName: Full=Diadenosine tetraphosphatase; SubName: Full=Hydrolase/phosphatase homolog; SubName: Full=MutT/Nudix family protein; chromosome CDS1047438 453 + 0.368653
CPj0994 CT837 hypothetical proteinSubName: Full=Uncharacterized protein; chromosome CDS1138804 2046 + 0.378299
CPj1055 hypothetical proteinSubName: Full=Hb4; SubName: Full=Uncharacterized protein; chromosome CDS1206028 831 + 0.430806
CPj1056 hypothetical proteinSubName: Full=PHB5 protein; SubName: Full=Uncharacterized protein; chromosome CDS1206861 705 + 0.409929
CPj1058 CT355 hypothetical proteinRecName: Full=Protein CPn_1058/CP_0792/CPj1058/CpB1100; Flags: Precursor; chromosome CDS1210082 1092 + 0.418498
ada methyltransferaseSubName: Full=DNA methyltransferase; SubName: Full=Methylated-DNA-protein-cysteine S-methyltransferase; SubName: Full=Methyltransferase; chromosome CDS685260 522 + 0.438697
dnaA_1 replication initiation factorRecName: Full=Chromosomal replication initiator protein DnaA 1; chromosome CDS349214 1383 - 0.372379
dnaA_2 replication initiation factorRecName: Full=Chromosomal replication initiator protein DnaA 2; chromosome CDS469322 1353 + 0.377679
dnaB replicative DNA helicaseSubName: Full=Replicative DNA Helicase; SubName: Full=Replicative DNA helicase; chromosome CDS708112 1350 + 0.396296
dnaE DNA polymerase III alphaRecName: Full=DNA polymerase III subunit alpha; EC=2.7.7.7; chromosome CDS745709 3723 + 0.402632
dnaG DNA primaseRecName: Full=DNA primase; EC=2.7.7.-; chromosome CDS1075334 1773 + 0.402707
dnaN DNA polymerase III (beta chain)RecName: Full=DNA polymerase III subunit beta; EC=2.7.7.7; chromosome CDS381900 1101 + 0.40327
dnaQ_1 DNA polymerase III epsilon chainSubName: Full=DNA Polymerase III Epsilon Chain; SubName: Full=DNA polymerase III epsilon chain; SubName: Full=DNA polymerase III, epsilon subunit, putative; chromosome CDS454832 714 + 0.415966
dnaQ_2 DNA polymerase III epsilon chainSubName: Full=DNA Polymerase III Epsilon Chain; SubName: Full=DNA polymerase III; SubName: Full=DNA polymerase III epsilon chain; SubName: Full=DNA polymerase III, epsilon subunit, putative; chromosome CDS736419 750 - 0.372
dnaX_1 DNA polymerase III gamma and tauSubName: Full=DNA polymerase III gamma and tau; chromosome CDS53986 1329 - 0.408578
dnaX_2 DNA polymerase III gamma and tauSubName: Full=DNA Polymerase III Gamma and Tau; SubName: Full=DNA polymerase III gamma and tau; SubName: Full=DNA polymerase III, tau subunit, putative; chromosome CDS303959 897 - 0.389075
dnlJ DNA ligaseRecName: Full=DNA ligase; EC=6.5.1.2; AltName: Full=Polydeoxyribonucleotide synthase [NAD(+)]; chromosome CDS185426 1989 + 0.414279
gyrA_1 DNA gyrase subunit ARecName: Full=DNA gyrase subunit A; EC=5.99.1.3; chromosome CDS305471 2505 - 0.40998
gyrA_2 DNA gyrase subunit ASubName: Full=DNA gyrase subunit A; chromosome CDS802790 1437 + 0.409882
gyrB_1 DNA gyrase subunit BRecName: Full=DNA gyrase subunit B; EC=5.99.1.3; chromosome CDS307991 2418 - 0.392473
gyrB_2 DNA gyrase subunit BSubName: Full=DNA Gyrase Subunit B; SubName: Full=DNA gyrase subunit B; SubName: Full=DNA gyrase, subunit B; chromosome CDS800978 1809 + 0.380873
himD integration host factor alphaRecName: Full=Probable DNA-binding protein HU; chromosome CDS461263 303 - 0.40264
mfd transcription-repair couplingRecName: Full=Transcription-repair-coupling factor; Short=TRCF; EC=3.6.4.-; chromosome CDS1017137 3258 - 0.413137
mutL DNA mismatch repairRecName: Full=DNA mismatch repair protein MutL; chromosome CDS918445 1743 + 0.429145
mutS DNA mismatch repairRecName: Full=DNA mismatch repair protein MutS; chromosome CDS1072364 2487 - 0.419381
mutY adenine glycosylaseSubName: Full=A/G-specific adenine glycosylase; SubName: Full=Adenine Glycosylase; SubName: Full=Adenine glycosylase; chromosome CDS447594 1110 - 0.408108
nfo endonuclease IVRecName: Full=Probable endonuclease 4; EC=3.1.21.2; AltName: Full=Endodeoxyribonuclease IV; AltName: Full=Endonuclease IV; chromosome CDS821419 882 + 0.405896
nth enodnuclease IIIRecName: Full=Endonuclease III; EC=4.2.99.18; AltName: Full=DNA-(apurinic or apyrimidinic site) lyase; chromosome CDS946463 630 - 0.422222
polA DNA polymerase ISubName: Full=DNA Polymerase I; SubName: Full=DNA polymerase I; chromosome CDS701340 2613 - 0.380788
priA primosomal protein N'RecName: Full=Primosomal protein N; EC=3.6.4.-; AltName: Full=ATP-dependent helicase PriA; chromosome CDS1054373 2250 - 0.428889
recA RecA recombination proteinRecName: Full=Protein RecA; AltName: Full=Recombinase A; chromosome CDS857857 1062 - 0.417137
recB exodeoxyribonuclease V, betaRecName: Full=RecBCD enzyme subunit RecB; EC=3.1.11.5; AltName: Full=Exonuclease V subunit RecB; Short=ExoV subunit RecB; AltName: Full=Helicase/nuclease RecBCD subunit RecB; chromosome CDS830067 3153 + 0.378053
recC exodeoxyribonuclease V, gammaSubName: Full=Exodeoxyribonuclease V, gamma; chromosome CDS827006 3075 + 0.382439
recD_1 exodeoxyribonuclease V (alpha subunit)SubName: Full=Exodeoxyribonuclease V (Alpha subunit); chromosome CDS153482 2199 - 0.397453
recD_2 exodeoxyribonuclease V, alphaSubName: Full=Exodeoxyribonuclease V, alpha; SubName: Full=Exodeoxyribonuclease V, alpha subunit, putative; SubName: Full=Exonuclease V alpha-subunit; chromosome CDS847925 1482 + 0.397436
recJ ssDNA exonucleaseSubName: Full=Single-stranded-DNA-specific exonuclease RecJ; SubName: Full=SsDNA Exonuclease; SubName: Full=SsDNA exonuclease; SubName: Full=SsDNA-specific exonuclease; chromosome CDS647611 1767 - 0.433503
recR recombination proteinRecName: Full=Recombination protein RecR; chromosome CDS336438 603 + 0.363184
rnhB_1 ribonuclease HIIRecName: Full=Ribonuclease HII; Short=RNase HII; EC=3.1.26.4; chromosome CDS150234 645 + 0.403101
rnhB_2 rbonuclease HIIRecName: Full=Ribonuclease HIII; Short=RNase HIII; EC=3.1.26.4; chromosome CDS1218696 897 - 0.395764
ruvA holliday junction helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvA; EC=3.6.4.12; chromosome CDS712837 624 - 0.413462
ruvB holliday junction helicaseRecName: Full=Holliday junction ATP-dependent DNA helicase RuvB; EC=3.6.4.12; chromosome CDS437840 1014 - 0.425049
ruvC crossover junction endonucleaseRecName: Full=Crossover junction endodeoxyribonuclease RuvC; EC=3.1.22.4; AltName: Full=Holliday junction nuclease RuvC; AltName: Full=Holliday junction resolvase RuvC; chromosome CDS713462 507 - 0.424063
ssb SS DNA binding proteinRecName: Full=Single-stranded DNA-binding protein; Short=SSB; chromosome CDS433752 483 - 0.416149
ung uracil DNA glycosylaseRecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.27; chromosome CDS871809 711 + 0.419128
uvrA excinuclease ABC subunit ARecName: Full=UvrABC system protein A; Short=UvrA protein; AltName: Full=Excinuclease ABC subunit A; chromosome CDS118505 5481 - 0.422368
uvrB exinuclease ABC subunit BRecName: Full=UvrABC system protein B; Short=Protein UvrB; AltName: Full=Excinuclease ABC subunit B; chromosome CDS906045 1974 - 0.438197
uvrC excinuclease ABC, subunit CRecName: Full=UvrABC system protein C; Short=Protein UvrC; AltName: Full=Excinuclease ABC subunit C; chromosome CDS1070550 1812 - 0.415011
uvrD DNA helicaseSubName: Full=ATP-dependent helicase PcrA; SubName: Full=DNA Helicase; SubName: Full=DNA helicase; chromosome CDS869787 1920 - 0.402604
xerC integrase/recombinaseRecName: Full=Tyrosine recombinase XerC; chromosome CDS36329 939 - 0.42066
xerD integrase/recombinaseRecName: Full=Tyrosine recombinase XerD; chromosome CDS1172737 906 - 0.461369
xseA exodoxyribonuclease VIIRecName: Full=Exodeoxyribonuclease 7 large subunit; EC=3.1.11.6; AltName: Full=Exodeoxyribonuclease VII large subunit; Short=Exonuclease VII large subunit; chromosome CDS1214490 1665 - 0.436637
yabD PHP superfamily (urease/pyrimidinase) hydrolaseSubName: Full=MttC; SubName: Full=MttC protein, putative; SubName: Full=PHP superfamily (Urease/pyrimidinase) hydrolase; chromosome CDS884940 786 + 0.438931
yggF YggF family hypothetical proteinRecName: Full=Putative Holliday junction resolvase; EC=3.1.-.-; chromosome CDS273384 456 + 0.39693
yhhF methylaseSubName: Full=Methylase; SubName: Full=Predicted Methylase; SubName: Full=Putative methylase; SubName: Full=Uncharacterized protein; chromosome CDS695468 561 - 0.390374